ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdm24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Minus Query: 116 ggcggcggcggtgcgggtggagaaggcgacgagcgacctgctgctggggcccgactggac 175 |||||||||||||||||| || ||||| |||||||| |||||||| || ||||||||||| Sbjct: 136809 ggcggcggcggtgcgggtagacaaggccacgagcgagctgctgctcggccccgactggac 136750 Query: 176 cctcaacatcgacatctgcgacgacgccaactccgatcacggg 218 ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 136749 cctcaacatcgacatctgcgacgccgtcaactccgatcacggg 136707 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 217 ggcaagcgaaagaggtgattaaaactttgaagaagcgtcttcaacacaagaattcatcgg 276 ||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||| || Sbjct: 135354 ggcaagcaaaagaggtgattaaagctttgaagaagcgtctccagcacaaaaattcaaagg 135295 Query: 277 ttcaatttcttgcgttgacg 296 |||| ||| |||| |||||| Sbjct: 135294 ttcagttttttgctttgacg 135275 Score = 63.9 bits (32), Expect = 5e-07 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 409 tgagggacaaaattttgacactccttgattcctggcaagaagcatttggtgggccctggt 468 |||||||||||||| | ||||||||| || ||||||||||||||||||||| |||| Sbjct: 134285 tgagggacaaaattctagtactccttgaatcttggcaagaagcatttggtggg-aatggt 134227 Query: 469 ggcaagcaccctcaattctactgggcatattctgaa 504 || ||||| || || | ||||||||||||| ||||| Sbjct: 134226 gggaagcatccccagtactactgggcatatgctgaa 134191 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 300 ttggagactctggtgaaaaattgtggggatcatgtgcattttctggttgtagagcgcggt 359 ||||| ||||| |||| |||||||||||||||||||||| | ||||||||||| | | Sbjct: 135183 ttggaaactctaatgaagaattgtggggatcatgtgcattcacaagttgtagagcgtgat 135124 Query: 360 atattgccggaaatgatcaaa 380 ||| ||| ||| ||||||||| Sbjct: 135123 atactgcaggagatgatcaaa 135103
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Minus Query: 116 ggcggcggcggtgcgggtggagaaggcgacgagcgacctgctgctggggcccgactggac 175 |||||||||||||||||| || ||||| |||||||| |||||||| || ||||||||||| Sbjct: 15744705 ggcggcggcggtgcgggtagacaaggccacgagcgagctgctgctcggccccgactggac 15744646 Query: 176 cctcaacatcgacatctgcgacgacgccaactccgatcacggg 218 ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 15744645 cctcaacatcgacatctgcgacgccgtcaactccgatcacggg 15744603 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 217 ggcaagcgaaagaggtgattaaaactttgaagaagcgtcttcaacacaagaattcatcgg 276 ||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||| || Sbjct: 15743250 ggcaagcaaaagaggtgattaaagctttgaagaagcgtctccagcacaaaaattcaaagg 15743191 Query: 277 ttcaatttcttgcgttgacg 296 |||| ||| |||| |||||| Sbjct: 15743190 ttcagttttttgctttgacg 15743171 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 128 gcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccctcaacatcga 187 ||||||||| |||||||||||| ||||||||| ||| ||||||||| || ||||| |||| Sbjct: 23206909 gcgggtggacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcga 23206968 Query: 188 catctgcgac 197 || |||||| Sbjct: 23206969 gatatgcgac 23206978 Score = 63.9 bits (32), Expect = 5e-07 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 409 tgagggacaaaattttgacactccttgattcctggcaagaagcatttggtgggccctggt 468 |||||||||||||| | ||||||||| || ||||||||||||||||||||| |||| Sbjct: 15742181 tgagggacaaaattctagtactccttgaatcttggcaagaagcatttggtggg-aatggt 15742123 Query: 469 ggcaagcaccctcaattctactgggcatattctgaa 504 || ||||| || || | ||||||||||||| ||||| Sbjct: 15742122 gggaagcatccccagtactactgggcatatgctgaa 15742087 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 300 ttggagactctggtgaaaaattgtggggatcatgtgcattttctggttgtagagcgcggt 359 ||||| ||||| |||| |||||||||||||||||||||| | ||||||||||| | | Sbjct: 15743079 ttggaaactctaatgaagaattgtggggatcatgtgcattcacaagttgtagagcgtgat 15743020 Query: 360 atattgccggaaatgatcaaa 380 ||| ||| ||| ||||||||| Sbjct: 15743019 atactgcaggagatgatcaaa 15742999 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 405 caagtgagggacaaaattttgacactccttgattcctggcaagaagcatttggtgg 460 ||||||||||| ||| | |||| ||| || || || |||||||||||||||||||| Sbjct: 23208570 caagtgagggataaagtattgatacttctggactcatggcaagaagcatttggtgg 23208625
>ref|NM_190404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccct 178 ||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| || | Sbjct: 51 ggcggcgccgcgggtggagaaggcgacaagccacctgctcatggggcccgactgggccgt 110 Query: 179 caacatcgacatctgcgac 197 |||| |||| ||||||||| Sbjct: 111 caacctcgaaatctgcgac 129 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 tcctggcaagaagcatttggtgg 460 ||||||||||||||||||||||| Sbjct: 370 tcctggcaagaagcatttggtgg 392
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccct 178 ||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| || | Sbjct: 35311971 ggcggcgccgcgggtggagaaggcgacaagccacctgctcatggggcccgactgggccgt 35311912 Query: 179 caacatcgacatctgcgac 197 |||| |||| ||||||||| Sbjct: 35311911 caacctcgaaatctgcgac 35311893 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 tcctggcaagaagcatttggtgg 460 ||||||||||||||||||||||| Sbjct: 35310063 tcctggcaagaagcatttggtgg 35310041 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 tggcggcggcggtgcgggtggaga 138 |||||||||||| ||||||||||| Sbjct: 35786734 tggcggcggcggcgcgggtggaga 35786711 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 34658256 cgtgcgtgcgtgcgtgcgtc 34658275 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 25439647 ccgtgcgtgcgtgcgtgcgt 25439628 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 6591969 cgtgcgtgcgtgcgtgcgtc 6591950
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccct 178 ||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| || | Sbjct: 75832 ggcggcgccgcgggtggagaaggcgacaagccacctgctcatggggcccgactgggccgt 75773 Query: 179 caacatcgacatctgcgac 197 |||| |||| ||||||||| Sbjct: 75772 caacctcgaaatctgcgac 75754 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 tcctggcaagaagcatttggtgg 460 ||||||||||||||||||||||| Sbjct: 73924 tcctggcaagaagcatttggtgg 73902
>dbj|AK070492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B11, full insert sequence Length = 2092 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccct 178 ||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| || | Sbjct: 104 ggcggcgccgcgggtggagaaggcgacaagccacctgctcatggggcccgactgggccgt 163 Query: 179 caacatcgacatctgcgac 197 |||| |||| ||||||||| Sbjct: 164 caacctcgaaatctgcgac 182 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 tcctggcaagaagcatttggtgg 460 ||||||||||||||||||||||| Sbjct: 423 tcctggcaagaagcatttggtgg 445
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 128 gcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccctcaacatcga 187 ||||||||| |||||||||||| ||||||||| ||| ||||||||| || ||||| |||| Sbjct: 138684 gcgggtggacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcga 138743 Query: 188 catctgcgac 197 || |||||| Sbjct: 138744 gatatgcgac 138753 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 405 caagtgagggacaaaattttgacactccttgattcctggcaagaagcatttggtgg 460 ||||||||||| ||| | |||| ||| || || || |||||||||||||||||||| Sbjct: 140345 caagtgagggataaagtattgatacttctggactcatggcaagaagcatttggtgg 140400
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 128 gcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccctcaacatcga 187 ||||||||| |||||||||||| ||||||||| ||| ||||||||| || ||||| |||| Sbjct: 32315 gcgggtggacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcga 32374 Query: 188 catctgcgac 197 || |||||| Sbjct: 32375 gatatgcgac 32384 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 405 caagtgagggacaaaattttgacactccttgattcctggcaagaagcatttggtgg 460 ||||||||||| ||| | |||| ||| || || || |||||||||||||||||||| Sbjct: 33976 caagtgagggataaagtattgatacttctggactcatggcaagaagcatttggtgg 34031
>dbj|AK065069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K05, full insert sequence Length = 2241 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 128 gcgggtggagaaggcgacgagcgacctgctgctggggcccgactggaccctcaacatcga 187 ||||||||| |||||||||||| ||||||||| ||| ||||||||| || ||||| |||| Sbjct: 132 gcgggtggacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcga 191 Query: 188 catctgcgac 197 || |||||| Sbjct: 192 gatatgcgac 201 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 405 caagtgagggacaaaattttgacactccttgattcctggcaagaagcatttggtgg 460 ||||||||||| ||| | |||| ||| || || || |||||||||||||||||||| Sbjct: 409 caagtgagggataaagtattgatacttctggactcatggcaagaagcatttggtgg 464
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 162 gggcccgactggaccctcaacatcgacatctgcgac 197 |||||||||||| |||||||| |||| ||||||||| Sbjct: 13005911 gggcccgactggtccctcaacctcgagatctgcgac 13005946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 27187070 ccgtgcgtgcgtgcgtgcgt 27187051 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 26408163 ggcggcggcggtgcgggtgg 26408144 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ctccccgtgcgtgcgtgcgtgcgt 57 |||| ||||||||||||||||||| Sbjct: 3921684 ctccacgtgcgtgcgtgcgtgcgt 3921661
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 162 gggcccgactggaccctcaacatcgacatctgcgac 197 |||||||||||| |||||||| |||| ||||||||| Sbjct: 44712 gggcccgactggtccctcaacctcgagatctgcgac 44747
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 162 gggcccgactggaccctcaacatcgacatctgcgac 197 |||||||||||| |||||||| |||| ||||||||| Sbjct: 88288 gggcccgactggtccctcaacctcgagatctgcgac 88323
>dbj|AK101738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061J09, full insert sequence Length = 2528 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 162 gggcccgactggaccctcaacatcgacatctgcgac 197 |||||||||||| |||||||| |||| ||||||||| Sbjct: 190 gggcccgactggtccctcaacctcgagatctgcgac 225
>dbj|AK058294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F02, full insert sequence Length = 2291 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 162 gggcccgactggaccctcaacatcgacatctgcgac 197 |||||||||||| |||||||| |||| ||||||||| Sbjct: 214 gggcccgactggtccctcaacctcgagatctgcgac 249
>gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208610 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtcttcc 62 ||||||||||||||||||||||| Sbjct: 105986 gtgcgtgcgtgcgtgcgtcttcc 105964
>emb|BX000530.10| Mouse DNA sequence from clone RP24-500B8 on chromosome 2, complete sequence Length = 45884 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 35 tccccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||||| Sbjct: 41496 tccccgtgcgtgcgtgcgtgcgt 41518
>gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosome 19, complete sequence Length = 160363 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 ccccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||||| Sbjct: 111497 ccccgtgcgtgcgtgcgtgcgt 111518
>gb|AC158914.4| Mus musculus chromosome 5, clone RP24-249F11, complete sequence Length = 155216 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 ccccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||||| Sbjct: 119037 ccccgtgcgtgcgtgcgtgcgt 119058
>emb|AJ544892.1|TNI544892 Tetraodon nigroviridis crfb1 gene, crfb2 gene, crfb3 gene, crfb4 gene, crfb5 gene, crfb6 gene and ORF1 DNA Length = 30094 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 tccccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||||| Sbjct: 3013 tccccgtgcgtgcgtgcgtgcg 2992
>gb|AC000093.5| Homo sapiens Chromosome 22q11 Cosmid Clone carlaa, complete sequence Length = 42686 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 ccccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||||| Sbjct: 14570 ccccgtgcgtgcgtgcgtgcgt 14549
>emb|AJ544905.1|TNI544905 Tetraodon nigroviridis mRNA for cytokine receptor CRFB1 (crfb1 gene) Length = 1886 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 tccccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||||| Sbjct: 1693 tccccgtgcgtgcgtgcgtgcg 1672
>gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538, complete sequence Length = 42301 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtctt 60 |||||||||||||||||||||| Sbjct: 33042 cgtgcgtgcgtgcgtgcgtctt 33021
>gb|AF006988.1|HSCDCREL1 Homo sapiens septin (CDCrel-1) gene, alternatively spliced, complete cds, septin (CDCrel-1) gene, alternatively spliced, partial cds and platelet membrane glycoprotein Ib beta precursor (GPIb beta) gene, complete cds Length = 13728 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 ccccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||||| Sbjct: 7069 ccccgtgcgtgcgtgcgtgcgt 7048
>emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in linkage group 5, complete sequence Length = 253220 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtctt 60 |||||||||||||||||||||| Sbjct: 167708 cgtgcgtgcgtgcgtgcgtctt 167729
>dbj|AB209168.1| Homo sapiens mRNA for H5 variant protein Length = 4113 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 ccccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||||| Sbjct: 730 ccccgtgcgtgcgtgcgtgcgt 709
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtctt 60 ||||||||||||||||||||| Sbjct: 42093 gtgcgtgcgtgcgtgcgtctt 42113
>ref|XM_420223.1| PREDICTED: Gallus gallus similar to PHD-like zinc finger protein (LOC422235), mRNA Length = 2296 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgtc 58 ||||||||||||||||||||| Sbjct: 187 ccgtgcgtgcgtgcgtgcgtc 207
>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence Length = 187090 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 173341 cccgtgcgtgcgtgcgtgcgt 173321
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 aactccgatcacgggcaagcg 224 ||||||||||||||||||||| Sbjct: 3561071 aactccgatcacgggcaagcg 3561051
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 29541181 cccgtgcgtgcgtgcgtgcgt 29541161 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcg 150 |||||||||| |||||||| ||||||||||| Sbjct: 26848613 ggcggcggtgggggtggagttggcgacgagcg 26848582 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 10494574 ccgtgcgtgcgtgcgtgcgt 10494555
>gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome 19, complete sequence Length = 202504 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 142073 cccgtgcgtgcgtgcgtgcgt 142093
>gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, complete sequence Length = 144491 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 124248 cgtgcgtgcgtgcgtgcgtct 124268
>gb|AC136743.5| Mus musculus chromosome 9, clone RP23-149D5, complete sequence Length = 213343 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 5651 cccgtgcgtgcgtgcgtgcgt 5631
>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence Length = 229072 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 11694 cgtgcgtgcgtgcgtgcgtct 11674
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8 Length = 138191 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 18203 cccgtgcgtgcgtgcgtgcgt 18223
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgtc 58 ||||||||||||||||||||| Sbjct: 28418 ccgtgcgtgcgtgcgtgcgtc 28438
>emb|AL645969.20| Mouse DNA sequence from clone RP23-101H2 on chromosome 11 Contains a novel gene, complete sequence Length = 154687 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 9241 cgtgcgtgcgtgcgtgcgtct 9221
>emb|AL603984.7| Mouse DNA sequence from clone RP23-137B16 on chromosome 11 Contains a novel gene, the 5' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two Cpg islands, complete sequence Length = 224602 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 74958 cccgtgcgtgcgtgcgtgcgt 74938
>emb|BX539343.9| Zebrafish DNA sequence from clone DKEY-58K6 in linkage group 17, complete sequence Length = 191248 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 150925 cgtgcgtgcgtgcgtgcgtct 150905
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgtc 58 ||||||||||||||||||||| Sbjct: 19377164 ccgtgcgtgcgtgcgtgcgtc 19377184 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 34329037 ccgtgcgtgcgtgcgtgcgt 34329056 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 20678858 ccgtgcgtgcgtgcgtgcgt 20678877 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 15878527 ccgtgcgtgcgtgcgtgcgt 15878508
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 11317094 cccgtgcgtgcgtgcgtgcgt 11317074 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||| Sbjct: 25474688 cccgtgcgtgcgtgcgtgcg 25474707 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 23565575 gtgcgtgcgtgcgtgcgtct 23565594 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 23266226 ggcggcggcggtgcgggtgg 23266245 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 21870670 ccgtgcgtgcgtgcgtgcgt 21870689
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 14818422 cgtgcgtgcgtgcgtgcgtct 14818402
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 29632603 cccgtgcgtgcgtgcgtgcgt 29632583 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcg 150 |||||||||| |||||||| ||||||||||| Sbjct: 26939936 ggcggcggtgggggtggagttggcgacgagcg 26939905 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 10492675 ccgtgcgtgcgtgcgtgcgt 10492656
>gb|AC154733.2| Mus musculus BAC clone RP24-380I6 from chromosome 13, complete sequence Length = 209751 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 76073 cccgtgcgtgcgtgcgtgcgt 76053
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 63811 cccgtgcgtgcgtgcgtgcgt 63791
>gb|AY135692.1| Mus musculus Miwi 2 protein (Miwi2) gene, complete cds Length = 99999 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 74865 cccgtgcgtgcgtgcgtgcgt 74885
>gb|AC006063.1|AC006063 Homo sapiens 12p13.3 PAC RP3-377H17 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 150001 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 82477 cccgtgcgtgcgtgcgtgcgt 82457
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 143189 cgtgcgtgcgtgcgtgcgtct 143169
>dbj|AP004696.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475A09 Length = 143417 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 54699 cccgtgcgtgcgtgcgtgcgt 54679
>dbj|AP005447.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0035G02 Length = 159802 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 58027 cgtgcgtgcgtgcgtgcgtct 58007
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 7489 cccgtgcgtgcgtgcgtgcgt 7509
>dbj|AK070423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048O19, full insert sequence Length = 3685 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 148 cgtgcgtgcgtgcgtgcgtct 168
>gb|AC120217.13| Mus musculus chromosome 1, clone RP24-542K6, complete sequence Length = 164016 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 60338 cgtgcgtgcgtgcgtgcgtct 60358
>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence Length = 179548 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 22137 cgtgcgtgcgtgcgtgcgtct 22157
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcgt 57 ||||||||||||||||||||| Sbjct: 102881 cccgtgcgtgcgtgcgtgcgt 102901
>dbj|AB025379.1| Haliotis discus discus DNA, CA repeat region Length = 280 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 170 cgtgcgtgcgtgcgtgcgtct 150
>emb|AL713880.1|CNS07YOW Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 366M1 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 111702 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtct 59 ||||||||||||||||||||| Sbjct: 45749 cgtgcgtgcgtgcgtgcgtct 45729
>ref|NM_114452.2| Arabidopsis thaliana unknown protein AT3G45830 mRNA, complete cds Length = 4174 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggtttggaatttcctaggcg 536 |||||||||||||||||||| Sbjct: 808 ggtttggaatttcctaggcg 827
>gb|BC076664.1| Xenopus tropicalis ADP-ribosylation factor 6, mRNA (cDNA clone MGC:79593 IMAGE:6979101), complete cds Length = 1309 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 catggcggcggcggtgcggg 132 |||||||||||||||||||| Sbjct: 356 catggcggcggcggtgcggg 337
>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence Length = 40624 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 23522 cgtgcgtgcgtgcgtgcgtc 23503
>ref|XM_482907.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 148 ggcggcggcggtgcgggtgg 167
>ref|XM_466968.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1531 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 12 gtgcgtgcgtgcgtgcgtct 31
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 836944 cgtgcgtgcgtgcgtgcgtc 836963
>gb|AY024085.1| Oryza sativa microsatellite MRG6410 containing (GCAC)X8, closest to marker R2231, genomic sequence Length = 232 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 134 ccgtgcgtgcgtgcgtgcgt 115
>gb|AY023988.1| Oryza sativa microsatellite MRG6313 containing (CACG)X6, closest to marker S10628, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 125 ccgtgcgtgcgtgcgtgcgt 106
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 43270 ccgtgcgtgcgtgcgtgcgt 43251
>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence Length = 215537 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 61541 ccgtgcgtgcgtgcgtgcgt 61522
>gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosome 12, complete sequence Length = 209416 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 136636 gtgcgtgcgtgcgtgcgtct 136617
>gb|AF024494.2| Caenorhabditis elegans cosmid C38C3, complete sequence Length = 36555 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cggtatattgccggaaatga 375 |||||||||||||||||||| Sbjct: 9347 cggtatattgccggaaatga 9328 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cggtatattgccggaaatga 375 |||||||||||||||||||| Sbjct: 9269 cggtatattgccggaaatga 9250
>gb|AC009847.9| Drosophila melanogaster clone BACR03L10, complete sequence Length = 180498 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tgcaaagaaaaaggcaaatg 402 |||||||||||||||||||| Sbjct: 168551 tgcaaagaaaaaggcaaatg 168570
>gb|AC150482.2| Bos taurus BAC CH240-308E11 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 179880 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 103852 ccgtgcgtgcgtgcgtgcgt 103871
>gb|AY639147.1| Stizostedion vitreum vitreum genomic sequence Length = 10284 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 4847 gtgcgtgcgtgcgtgcgtct 4828
>gb|AC148334.3| Mus musculus BAC clone RP23-213L20 from chromosome 13, complete sequence Length = 207106 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 106057 cgtgcgtgcgtgcgtgcgtc 106038
>gb|DQ192032.1|DQ192032S1 Stizostedion vitreum vitreum putative calpain-like protein gene, exons 1 through 14 Length = 10677 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 4847 gtgcgtgcgtgcgtgcgtct 4828
>gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, complete sequence Length = 186496 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 10961 gtgcgtgcgtgcgtgcgtct 10942
>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence Length = 221807 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 148476 ccgtgcgtgcgtgcgtgcgt 148457
>gb|AC109151.9| Mus musculus chromosome 1, clone RP24-530O9, complete sequence Length = 130025 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 101140 cgtgcgtgcgtgcgtgcgtc 101159
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1, xilon1 retrotransposon, helitron B73_14578, gypsy retrotransposon huck1 and ruda retrotransposon, complete sequence Length = 152384 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gtggagaaggcgacgagcga 151 |||||||||||||||||||| Sbjct: 20329 gtggagaaggcgacgagcga 20310
>gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, complete sequence Length = 169244 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gattaaaactttgaagaagc 252 |||||||||||||||||||| Sbjct: 111423 gattaaaactttgaagaagc 111404
>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence Length = 217251 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 74639 cgtgcgtgcgtgcgtgcgtc 74620
>ref|XM_980615.1| PREDICTED: Mus musculus hypothetical LOC622461 (LOC622461), mRNA Length = 1502 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 atggcggcggcggtgcgggtggag 137 ||||||||||||| |||||||||| Sbjct: 217 atggcggcggcggggcgggtggag 240
>ref|XM_898393.2| PREDICTED: Mus musculus hypothetical LOC622461 (LOC622461), mRNA Length = 1502 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 atggcggcggcggtgcgggtggag 137 ||||||||||||| |||||||||| Sbjct: 217 atggcggcggcggggcgggtggag 240
>ref|XM_989266.1| PREDICTED: Mus musculus hypothetical protein LOC676366 (LOC676366), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 atggcggcggcggtgcgggtggag 137 ||||||||||||| |||||||||| Sbjct: 1286 atggcggcggcggggcgggtggag 1263
>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 212491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 123536 ccgtgcgtgcgtgcgtgcgt 123555
>emb|CR848726.6| Zebrafish DNA sequence from clone CH211-244M8 in linkage group 2, complete sequence Length = 155408 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 29745 cgtgcgtgcgtgcgtgcgtc 29764
>emb|CR956404.10| Pig DNA sequence from clone PigE-75D22 on chromosome 17, complete sequence Length = 135396 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 52604 cgtgcgtgcgtgcgtgcgtc 52585
>emb|CR932998.12| Zebrafish DNA sequence from clone DKEY-111I23 in linkage group 9, complete sequence Length = 218171 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 5602 cgtgcgtgcgtgcgtgcgtc 5621
>gb|AC124447.3| Mus musculus BAC clone RP24-209M20 from chromosome 1, complete sequence Length = 167053 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 1750 cgtgcgtgcgtgcgtgcgtc 1769
>gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosome 1, complete sequence Length = 205642 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 163027 ccgtgcgtgcgtgcgtgcgt 163046
>gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome 12, complete sequence Length = 178473 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 158431 gtgcgtgcgtgcgtgcgtct 158450
>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence Length = 209670 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 193147 gtgcgtgcgtgcgtgcgtct 193128
>gb|AC124187.3| Mus musculus BAC clone RP23-237I24 from 18, complete sequence Length = 172828 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 143657 cgtgcgtgcgtgcgtgcgtc 143676 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 21919 ccgtgcgtgcgtgcgtgcgt 21938
>gb|AC122305.4| Mus musculus BAC clone RP23-284E19 from 9, complete sequence Length = 192434 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 8450 ccgtgcgtgcgtgcgtgcgt 8431
>gb|AC115299.4| Mus musculus BAC clone RP23-444O19 from 13, complete sequence Length = 201296 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 15490 cgtgcgtgcgtgcgtgcgtc 15509
>gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, complete sequence Length = 169858 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 126560 cgtgcgtgcgtgcgtgcgtc 126541
>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence Length = 175515 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 148618 ccgtgcgtgcgtgcgtgcgt 148599
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 112354 ccgtgcgtgcgtgcgtgcgt 112373
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 53440 ccgtgcgtgcgtgcgtgcgt 53459
>emb|CR656113.3|CNS0F587 Tetraodon nigroviridis full-length cDNA Length = 1149 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 15 cgtgcgtgcgtgcgtgcgtc 34
>emb|CR638475.1|CNS0ERM9 Tetraodon nigroviridis full-length cDNA Length = 1790 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 11 ccgtgcgtgcgtgcgtgcgt 30
>gb|AY788884.1| Salvelinus confluentus microsatellite Sco215 sequence Length = 552 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 380 cgtgcgtgcgtgcgtgcgtc 399
>emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in linkage group 15, complete sequence Length = 115533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 112826 ccgtgcgtgcgtgcgtgcgt 112807
>ref|NM_205332.3| Gallus gallus CCCTC-binding factor (zinc finger protein) (CTCF), mRNA Length = 4034 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 71 cgtgcgtgcgtgcgtgcgtc 52
>emb|AL031846.2|HS742C19 Human DNA sequence from clone RP4-742C19 on chromosome 22q12.3-13.1, complete sequence Length = 122748 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cctccccgtgcgtgcgtgcg 52 |||||||||||||||||||| Sbjct: 55905 cctccccgtgcgtgcgtgcg 55886
>gb|AC158931.4| Mus musculus chromosome 1, clone RP23-3H19, complete sequence Length = 212994 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 207812 cgtgcgtgcgtgcgtgcgtc 207831
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 ggcggcggtgcgggtggagaaggcgacgagcg 150 |||||||||| |||||||| ||||||||||| Sbjct: 27613 ggcggcggtgggggtggagttggcgacgagcg 27582
>gb|AC129351.6| Homo sapiens 12 BAC RP11-466G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161618 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 aaatgatcaaagttgcaaag 389 |||||||||||||||||||| Sbjct: 118321 aaatgatcaaagttgcaaag 118302
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 1201225 cgtgcgtgcgtgcgtgcgtc 1201206
>emb|Z22605.1|GDCTCFPRA G.domesticus CTCF protein mRNA Length = 4252 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 289 cgtgcgtgcgtgcgtgcgtc 270
>gb|AF532989.1| Mus musculus phosphoinositide 3 kinase P110delta (Pik3cd) gene, complete cds Length = 21152 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 1667 ccgtgcgtgcgtgcgtgcgt 1686
>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24 Length = 75337 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 21473 ccgtgcgtgcgtgcgtgcgt 21454
>ref|NM_001006796.2| Xenopus tropicalis ADP-ribosylation factor 6 (arf6), mRNA Length = 1468 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 catggcggcggcggtgcggg 132 |||||||||||||||||||| Sbjct: 528 catggcggcggcggtgcggg 509
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 114944 ggcggcggcggtgcgggtgg 114963
>emb|AL592306.11| Zebrafish DNA sequence from clone BUSM1-67D8 in linkage group 17 Contains a novel gene for a vesicle-transport related protein, a novel gene for a protein similar to KIAA1333 and a CpG island, complete sequence Length = 122418 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 92003 gtgcgtgcgtgcgtgcgtct 92022
>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete sequence Length = 215657 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 167432 cgtgcgtgcgtgcgtgcgtc 167451
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 113292 ccgtgcgtgcgtgcgtgcgt 113311
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 65092 ccgtgcgtgcgtgcgtgcgt 65073
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggtttggaatttcctaggcg 536 |||||||||||||||||||| Sbjct: 38449 ggtttggaatttcctaggcg 38468
>emb|AJ320506.1|MMU320506 Mus musculus Dlk1 gene for delta-like and Gtl2 gene Length = 111805 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 106480 gtgcgtgcgtgcgtgcgtct 106499
>emb|AJ277108.1|TRE277108 Trichoderma reesei ypt1 gene for small GTP-binding protein YPTI, exons 1-5 Length = 2351 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 2016 cgtgcgtgcgtgcgtgcgtc 1997
>emb|CR932958.2| Medicago truncatula chromosome 5 clone mth2-174i23, COMPLETE SEQUENCE Length = 122746 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 aaatgatcaaagttgcaaag 389 |||||||||||||||||||| Sbjct: 59415 aaatgatcaaagttgcaaag 59396
>emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in linkage group 1, complete sequence Length = 199679 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 92388 ccgtgcgtgcgtgcgtgcgt 92369
>emb|AL669844.20| Mouse DNA sequence from clone RP23-395O6 on chromosome 11 Contains the 3' end of a novel gene, a novel gene, the Stk10 gene for serine/threonine kinase 10, the 5' end of the Fbxw1b gene for F-box and WD-40 domain protein 1B and two CpG islands, complete sequence Length = 221145 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 154989 cgtgcgtgcgtgcgtgcgtc 155008
>gb|AC129675.6| Homo sapiens 12 BAC RP11-310A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 112495 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 aaatgatcaaagttgcaaag 389 |||||||||||||||||||| Sbjct: 69273 aaatgatcaaagttgcaaag 69254
>emb|AL591399.3| Zebrafish DNA sequence from clone BUSM1-172D23 in linkage group 2 Contains 24 TCR-alpha V segments (II-85 to II-108) two of which are pseudogenes (II-92 and II-104), 3 C segments, 13 J segments and a CpG island, complete sequence Length = 97774 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 72330 cgtgcgtgcgtgcgtgcgtc 72311
>emb|CR394561.8| Zebrafish DNA sequence from clone CH211-28G14 in linkage group 17, complete sequence Length = 154908 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 129861 gtgcgtgcgtgcgtgcgtct 129880
>gb|AY567972.1| Dunaliella viridis nitrate reductase (NR) gene, complete cds Length = 14650 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 6961 cgtgcgtgcgtgcgtgcgtc 6942
>emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 in linkage group 13, complete sequence Length = 168518 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 134335 ccgtgcgtgcgtgcgtgcgt 134316
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 50387 ccgtgcgtgcgtgcgtgcgt 50368
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 21719 gtgcgtgcgtgcgtgcgtct 21738
>emb|AJ132478.3|CRE132478 Chlamydomonas reinhardtii cDhc1b gene for cytoplasmic dynein heavy chain 1b Length = 22023 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 2078 ccgtgcgtgcgtgcgtgcgt 2059
>gb|AY074396.1| Chlorobium limicola rare lipoprotein A (rlpA), cytochrome c subunit of flavocytochrome c sulfide dehydrogenase (soxE), and flavoprotein subunit of flavocytochrome c sulfide dehydrogenase (soxF1) genes, complete cds Length = 7272 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 5263 ggcggcggcggtgcgggtgg 5282
>gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205209 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 43452 ccgtgcgtgcgtgcgtgcgt 43433
>dbj|AB178078.1| Haliotis discus hannai DNA, microsatellite marker A737CT Length = 632 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 564 cgtgcgtgcgtgcgtgcgtc 545
>dbj|AB178069.1| Haliotis discus hannai DNA, microsatellite marker A601CA Length = 618 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 549 cgtgcgtgcgtgcgtgcgtc 530
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 85463 cgtgcgtgcgtgcgtgcgtc 85444
>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence Length = 175606 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 142950 ccgtgcgtgcgtgcgtgcgt 142931
>gb|BC103371.1| Bos taurus major vault protein, mRNA (cDNA clone MGC:127407 IMAGE:7951341), complete cds Length = 2815 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cctgctgctggggcccgact 171 |||||||||||||||||||| Sbjct: 1588 cctgctgctggggcccgact 1607
>gb|AF334759.1|AF334759 Hordeum vulgare homeodomain protein JUBEL2 (JuBel2) gene, complete cds Length = 9112 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 3752 ccgtgcgtgcgtgcgtgcgt 3733 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 3747 cgtgcgtgcgtgcgtgcgtc 3728
>gb|AF199017.1|AF199017 Leishmania major elongation factor 2 (EF2-2) mRNA, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccccgtgcgtgcgtgcgtgc 55 |||||||||||||||||||| Sbjct: 199 ccccgtgcgtgcgtgcgtgc 218
>gb|AC182740.1| Gasterosteus aculeatus clone VMRC26-91C14, complete sequence Length = 160244 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 33529 ccgtgcgtgcgtgcgtgcgt 33548
>emb|BX784038.11| Zebrafish DNA sequence from clone CH211-217K23 in linkage group 10, complete sequence Length = 195221 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 47023 cgtgcgtgcgtgcgtgcgtc 47004
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 123150 cgtgcgtgcgtgcgtgcgtc 123169
>emb|BX530060.6| Zebrafish DNA sequence from clone DKEY-283F16 in linkage group 16, complete sequence Length = 174837 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gtgattaaaactttgaagaa 250 |||||||||||||||||||| Sbjct: 141217 gtgattaaaactttgaagaa 141198
>emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 in linkage group 13, complete sequence Length = 194184 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 180003 cgtgcgtgcgtgcgtgcgtc 179984
>dbj|AK137532.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830132H07 product:kinase suppressor of ras, full insert sequence Length = 5259 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 2671 cgtgcgtgcgtgcgtgcgtc 2690
>gb|DQ067540.1|DQ067538S3 Lepilemur edwardsi paired box 9 (PAX9) gene, exon 4 and complete cds Length = 684 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgtgcattttctggttgtag 351 |||||||||||||||||||| Sbjct: 147 tgtgcattttctggttgtag 166
>gb|DQ067534.1|DQ067532S3 Daubentonia madagascariensis paired box 9 (PAX9) gene, exon 4 and complete cds Length = 772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgtgcattttctggttgtag 351 |||||||||||||||||||| Sbjct: 147 tgtgcattttctggttgtag 166
>dbj|AK081596.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130049B01 product:unclassifiable, full insert sequence Length = 1504 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 atggcggcggcggtgcgggtggag 137 ||||||||||||| |||||||||| Sbjct: 218 atggcggcggcggggcgggtggag 241
>gb|AC136213.2| Leishmania major strain Friedlin chromosome 27 clone LB02059, complete sequence Length = 102826 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 91767 cgtgcgtgcgtgcgtgcgtc 91786
>dbj|AK076263.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632404B05 product:unclassifiable, full insert sequence Length = 4051 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 3736 cgtgcgtgcgtgcgtgcgtc 3717
>tpg|BK004879.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) growth-regulating factor 10 (GRF10) gene, complete cds Length = 4980 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 2793 cgtgcgtgcgtgcgtgcgtc 2774
>gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome 2R, region 41E-41E, BAC clone BACR45O18, complete sequence Length = 176510 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tgcaaagaaaaaggcaaatg 402 |||||||||||||||||||| Sbjct: 142979 tgcaaagaaaaaggcaaatg 142960
>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213412 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 137976 ccgtgcgtgcgtgcgtgcgt 137957
>emb|AL607078.26| Mouse DNA sequence from clone RP23-422H14 on chromosome 4, complete sequence Length = 138211 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 108912 ccgtgcgtgcgtgcgtgcgt 108893
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||| Sbjct: 10956480 cccgtgcgtgcgtgcgtgcg 10956499 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 6590002 cgtgcgtgcgtgcgtgcgtc 6589983
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 18608543 ccgtgcgtgcgtgcgtgcgt 18608562 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 1201225 cgtgcgtgcgtgcgtgcgtc 1201206
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 22525260 cgtgcgtgcgtgcgtgcgtc 22525279 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 20271328 ccgtgcgtgcgtgcgtgcgt 20271347
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 32352244 ccgtgcgtgcgtgcgtgcgt 32352225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 27747520 cgtgcgtgcgtgcgtgcgtc 27747539 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 25678798 gtgcgtgcgtgcgtgcgtct 25678817 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggcggtgcgggtggagaagg 141 |||||||||||||||||||| Sbjct: 3994959 ggcggtgcgggtggagaagg 3994940
>gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172188 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 atggcggcggcggtgcgggtggag 137 ||||||||||||| |||||||||| Sbjct: 31619 atggcggcggcggggcgggtggag 31596
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 110273 cgtgcgtgcgtgcgtgcgtc 110292
>emb|BX933944.1| Gallus gallus finished cDNA, clone ChEST127a4 Length = 1045 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 192 cgtgcgtgcgtgcgtgcgtc 211 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 187 ccgtgcgtgcgtgcgtgcgt 206
>gb|AC107304.5| Homo sapiens 3 BAC RP11-598F17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179532 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 caaagttgcaaagaaaaagg 396 |||||||||||||||||||| Sbjct: 85332 caaagttgcaaagaaaaagg 85313
>emb|BX649462.9| Mouse DNA sequence from clone RP23-324J22 on chromosome 7, complete sequence Length = 157941 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 60691 ccgtgcgtgcgtgcgtgcgt 60710
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 72140 cgtgcgtgcgtgcgtgcgtc 72121
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 65577 ggcggcggcggtgcgggtgg 65596
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 tggcggcggcggtgcgggtggaga 138 |||||||||||| ||||||||||| Sbjct: 51192 tggcggcggcggcgcgggtggaga 51169
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ctccccgtgcgtgcgtgcgtgcgt 57 |||| ||||||||||||||||||| Sbjct: 27560 ctccacgtgcgtgcgtgcgtgcgt 27537
>emb|BX663508.8| Zebrafish DNA sequence from clone CH211-144B6 in linkage group 22, complete sequence Length = 170295 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 97099 cgtgcgtgcgtgcgtgcgtc 97080
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 129647 ccgtgcgtgcgtgcgtgcgt 129628
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 50455 ccgtgcgtgcgtgcgtgcgt 50474
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 44086 ccgtgcgtgcgtgcgtgcgt 44067
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 40461 cgtgcgtgcgtgcgtgcgtc 40480
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 164828 ccgtgcgtgcgtgcgtgcgt 164847
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 20202 ggcggcggcggtgcgggtgg 20183
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 105890 ggcggcggcggtgcgggtgg 105871
>gb|AC122733.11| Mus musculus chromosome 5, clone RP24-506B15, complete sequence Length = 157625 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 7877 gtgcgtgcgtgcgtgcgtct 7858
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 32853 cgtgcgtgcgtgcgtgcgtc 32872
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 133386 cgtgcgtgcgtgcgtgcgtc 133405
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2, complete sequence Length = 185178 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 156315 cgtgcgtgcgtgcgtgcgtc 156296
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 148845 gtgcgtgcgtgcgtgcgtct 148864
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggcggtgcgggtggagaagg 141 |||||||||||||||||||| Sbjct: 41625 ggcggtgcgggtggagaagg 41606
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 81474 gtgcgtgcgtgcgtgcgtct 81493
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 128076 ccgtgcgtgcgtgcgtgcgt 128057
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 13757 ccgtgcgtgcgtgcgtgcgt 13738
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 150253 ccgtgcgtgcgtgcgtgcgt 150272
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||| Sbjct: 106004 cccgtgcgtgcgtgcgtgcg 106023
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 71339 ccgtgcgtgcgtgcgtgcgt 71358
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 45350 gtgcgtgcgtgcgtgcgtct 45369
>gb|AC099698.14| Mus musculus chromosome 5, clone RP23-415O9, complete sequence Length = 220813 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 109323 gtgcgtgcgtgcgtgcgtct 109342
>dbj|AK119397.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-D10, full insert sequence Length = 2745 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ggcggtgcgggtggagaagg 141 |||||||||||||||||||| Sbjct: 115 ggcggtgcgggtggagaagg 134
>dbj|AK101968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076J10, full insert sequence Length = 1530 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 11 gtgcgtgcgtgcgtgcgtct 30
>dbj|AK099681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071F22, full insert sequence Length = 2097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcggcggcggtgcgggtgg 135 |||||||||||||||||||| Sbjct: 147 ggcggcggcggtgcgggtgg 166
>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence Length = 160247 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 110888 cgtgcgtgcgtgcgtgcgtc 110869
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6, complete sequence Length = 170067 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 62571 cgtgcgtgcgtgcgtgcgtc 62590
>emb|AL591370.10| Zebrafish DNA sequence from clone BUSM1-52I16 in linkage group 6, complete sequence Length = 131033 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 75920 ccgtgcgtgcgtgcgtgcgt 75939
>emb|BX005201.7| Zebrafish DNA sequence from clone CH211-129C21 in linkage group 22, complete sequence Length = 184499 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 170912 ccgtgcgtgcgtgcgtgcgt 170931
>emb|CT009703.8| Zebrafish DNA sequence from clone DKEYP-32B7 in linkage group 12, complete sequence Length = 129251 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 106041 cgtgcgtgcgtgcgtgcgtc 106060
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 14215 ccgtgcgtgcgtgcgtgcgt 14234
>gb|AE003785.4| Drosophila melanogaster chromosome 2R, section 4 of 73 of the complete sequence Length = 301132 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tgcaaagaaaaaggcaaatg 402 |||||||||||||||||||| Sbjct: 164411 tgcaaagaaaaaggcaaatg 164392
>emb|CR762323.2| Xenopus tropicalis finished cDNA, clone TGas052g02 Length = 1468 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 catggcggcggcggtgcggg 132 |||||||||||||||||||| Sbjct: 528 catggcggcggcggtgcggg 509
>gb|AF077830.1|AF077830 Gallus gallus nuclear factor CTCF gene, promoter region and exon 1 Length = 2285 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 1920 cgtgcgtgcgtgcgtgcgtc 1901
>ref|NM_013571.1| Mus musculus kinase suppressor of ras 1 (Ksr1), mRNA Length = 4094 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 2860 cgtgcgtgcgtgcgtgcgtc 2879
>gb|U43585.1|MMU43585 Mus musculus kinase suppressor of ras-1 (KSR1) mRNA, complete cds Length = 4094 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 2860 cgtgcgtgcgtgcgtgcgtc 2879
>gb|AC149319.2| Phakopsora pachyrhizi clone JGIAFNA-101K17, complete sequence Length = 37217 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 aagaattcatcggttcaatt 283 |||||||||||||||||||| Sbjct: 21259 aagaattcatcggttcaatt 21278
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 18619396 ccgtgcgtgcgtgcgtgcgt 18619415 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 1201222 cgtgcgtgcgtgcgtgcgtc 1201203
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||| Sbjct: 10956179 cccgtgcgtgcgtgcgtgcg 10956198 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 6589877 cgtgcgtgcgtgcgtgcgtc 6589858
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cccgtgcgtgcgtgcgtgcg 56 |||||||||||||||||||| Sbjct: 105543 cccgtgcgtgcgtgcgtgcg 105562
>emb|AL713939.6|CNS07YPL Oryza sativa chromosome 12, . BAC OJ1722_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 8007 cgtgcgtgcgtgcgtgcgtc 7988
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11, complete sequence Length = 124629 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 25009 ccgtgcgtgcgtgcgtgcgt 25028
>gb|AC131779.4| Mus musculus BAC clone RP24-336D11 from 8, complete sequence Length = 171978 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 84061 cgtgcgtgcgtgcgtgcgtc 84080
>emb|CT009685.18| Pig DNA sequence from clone CH242-172A22 on chromosome 17, complete sequence Length = 130271 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 123462 cgtgcgtgcgtgcgtgcgtc 123481
>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence Length = 205819 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 178203 ccgtgcgtgcgtgcgtgcgt 178222
>gb|AC149591.5| Mus musculus BAC clone RP23-332I9 from 18, complete sequence Length = 231381 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 220494 ccgtgcgtgcgtgcgtgcgt 220513
>gb|AC133192.3| Mus musculus BAC clone RP23-396C4 from 9, complete sequence Length = 197959 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 148272 cgtgcgtgcgtgcgtgcgtc 148291
>gb|AC003002.1|AC003002 Human DNA from overlapping chromosome 19-specific cosmids R29515 and R28253, genomic sequence, complete sequence Length = 81786 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 13106 cgtgcgtgcgtgcgtgcgtc 13125
>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence Length = 193193 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 62200 gtgcgtgcgtgcgtgcgtct 62181
>ref|NM_001035317.1| Bos taurus major vault protein (MVP), mRNA Length = 2815 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cctgctgctggggcccgact 171 |||||||||||||||||||| Sbjct: 1588 cctgctgctggggcccgact 1607
>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence Length = 237824 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgtgcgtgcgtgcgtgcgtc 58 |||||||||||||||||||| Sbjct: 206054 cgtgcgtgcgtgcgtgcgtc 206073
>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12 Length = 163455 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 70632 ccgtgcgtgcgtgcgtgcgt 70613
>emb|AL845486.6| Mouse DNA sequence from clone RP23-236H7 on chromosome 2, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 158566 ccgtgcgtgcgtgcgtgcgt 158547
>emb|AL671880.15| Mouse DNA sequence from clone RP23-384C22 on chromosome X, complete sequence Length = 200535 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtgcgtgcgtgcgtgcgtct 59 |||||||||||||||||||| Sbjct: 14552 gtgcgtgcgtgcgtgcgtct 14533
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcaacatcgacatctgcgac 197 |||||||||||||||||||| Sbjct: 895882 tcaacatcgacatctgcgac 895901
>dbj|AB035188.1| Homo sapiens RHCE gene, intron 2, complete sequence, little C type Length = 5318 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtgcgtgcgtgcgtgcgt 57 |||||||||||||||||||| Sbjct: 1834 ccgtgcgtgcgtgcgtgcgt 1815 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,598,383 Number of Sequences: 3902068 Number of extensions: 4598383 Number of successful extensions: 149161 Number of sequences better than 10.0: 224 Number of HSP's better than 10.0 without gapping: 242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145197 Number of HSP's gapped (non-prelim): 3619 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
