Clone Name | basdm19 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ011807.1|HVU011807 Hordeum vulgare chloroplast tRNA-fMet and tRNA-Gly (UCC and GCC) genes Length = 2975 Score = 1245 bits (628), Expect = 0.0 Identities = 646/655 (98%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1178 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 1237 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1238 atccttaagtttttttttatattccgatgaaaactttagttcttataaaggattaaatcc 1297 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1298 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 1357 Query: 182 taatttaaattgcatccaaaataaaaattggattatgatatgagtacagagtcgcgaagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1358 taatttaaattgcatccaaaataaaaattggattatgatatgagtacagagtcgcgaagc 1417 Query: 242 ataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1418 ataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgga 1477 Query: 302 tgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaaggataag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1478 tgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaaggataag 1537 Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1538 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 1597 Query: 422 agctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaag 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1598 agctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaag 1657 Query: 482 taagtagattagatggatttagatagaatttctatctcctactctataaggatcatctag 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1658 taagtagattagatggatttagatagaatttctatctcctactctataaggatcatctag 1717 Query: 542 aaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgag 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1718 aaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgag 1777 Query: 602 aatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1778 aatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 1832
>emb|X02560.1|CHTATRN1 Wheat chloroplast genes for tRNA-Gly (GCC), tRNA-Met (CAU) and tRNA-Gly (UCC) Length = 2358 Score = 1025 bits (517), Expect = 0.0 Identities = 563/577 (97%), Gaps = 6/577 (1%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2027 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 1968 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1967 attgaggaagaatatacattctggcgatttgtatccaaagactaatttaaattgcatcca 1908 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1907 aaataaaaattggattatga-----gtacagagtcgcgaagcataattttgcattggatt 1853 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1852 -aagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 1794 Query: 320 gatttccaatcgtaactaaatcttcttttgttaaaggataaggaagccaaatagctaaaa 379 ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| Sbjct: 1793 gatttccaatcgtaactaaatcttcttaaaataaggaataaggaagccaaatagctaaaa 1734 Query: 380 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1733 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 1674 Query: 440 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1673 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 1614 Query: 500 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1613 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 1554 Query: 560 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1553 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 1494 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 1493 gaatgaaatcaaaatttcatgttcggttttgaattag 1457 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2108 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 2049 Query: 62 atccttaag 70 ||||||||| Sbjct: 2048 atccttaag 2040
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 1025 bits (517), Expect = 0.0 Identities = 563/577 (97%), Gaps = 6/577 (1%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2468 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 2409 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 2408 attgaggaagaatatacattctggcgatttgtatccaaagactaatttaaattgcatcca 2349 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2348 aaataaaaattggattatga-----gtacagagtcgcgaagcataattttgcattggatt 2294 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2293 -aagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 2235 Query: 320 gatttccaatcgtaactaaatcttcttttgttaaaggataaggaagccaaatagctaaaa 379 ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| Sbjct: 2234 gatttccaatcgtaactaaatcttcttaaaataaggaataaggaagccaaatagctaaaa 2175 Query: 380 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2174 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 2115 Query: 440 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2114 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 2055 Query: 500 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2054 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 1995 Query: 560 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1994 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 1935 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 1934 gaatgaaatcaaaatttcatgttcggttttgaattag 1898 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2549 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 2490 Query: 62 atccttaag 70 ||||||||| Sbjct: 2489 atccttaag 2481
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1025 bits (517), Expect = 0.0 Identities = 563/577 (97%), Gaps = 6/577 (1%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13822 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 13763 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 13762 attgaggaagaatatacattctggcgatttgtatccaaagactaatttaaattgcatcca 13703 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 13702 aaataaaaattggattatga-----gtacagagtcgcgaagcataattttgcattggatt 13648 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13647 -aagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 13589 Query: 320 gatttccaatcgtaactaaatcttcttttgttaaaggataaggaagccaaatagctaaaa 379 ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| Sbjct: 13588 gatttccaatcgtaactaaatcttcttaaaataaggaataaggaagccaaatagctaaaa 13529 Query: 380 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13528 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 13469 Query: 440 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13468 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 13409 Query: 500 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13408 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 13349 Query: 560 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13348 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 13289 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 13288 gaatgaaatcaaaatttcatgttcggttttgaattag 13252 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13903 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13844 Query: 62 atccttaag 70 ||||||||| Sbjct: 13843 atccttaag 13835
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 882 bits (445), Expect = 0.0 Identities = 608/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13676 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13617 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 13616 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 13559 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 13558 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 13499 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 13498 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 13439 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 13438 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 13380 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 13379 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 13320 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 13319 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 13260 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13259 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 13200 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 13199 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 13141 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 13140 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 13081 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13080 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 13022
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 882 bits (445), Expect = 0.0 Identities = 608/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97091 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 97032 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 97031 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 96974 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 96973 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 96914 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 96913 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 96854 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 96853 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 96795 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 96794 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 96735 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 96734 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 96675 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 96674 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 96615 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 96614 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 96556 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 96555 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 96496 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96495 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 96437
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 882 bits (445), Expect = 0.0 Identities = 608/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242970 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 9242911 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 9242910 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 9242853 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 9242852 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 9242793 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 9242792 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 9242733 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 9242732 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 9242674 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 9242673 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 9242614 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 9242613 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 9242554 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9242553 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 9242494 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 9242493 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 9242435 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 9242434 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 9242375 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242374 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 9242316 Score = 882 bits (445), Expect = 0.0 Identities = 608/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9139065 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 9139006 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 9139005 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 9138948 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 9138947 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 9138888 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 9138887 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 9138828 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 9138827 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 9138769 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 9138768 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 9138709 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 9138708 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 9138649 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9138648 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 9138589 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 9138588 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 9138530 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 9138529 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 9138470 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9138469 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 9138411 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/75 (86%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 416 tgtttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattaggga 475 ||||||||||| || |||||| |||| |||| |||| |||||||| |||||||||| ||| Sbjct: 20404844 tgtttcagctccgtagaaacctaattatttt-ctca-gatctcttaaatgaaattaagga 20404901 Query: 476 acgaagtaagtagat 490 || |||||| ||||| Sbjct: 20404902 ac-aagtaattagat 20404915
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 882 bits (445), Expect = 0.0 Identities = 608/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13679 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13620 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 13619 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 13562 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 13561 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 13502 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 13501 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 13442 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 13441 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 13383 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 13382 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 13323 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 13322 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 13263 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13262 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 13203 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 13202 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 13144 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 13143 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 13084 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13083 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 13025
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 874 bits (441), Expect = 0.0 Identities = 607/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13743 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13684 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 13683 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 13626 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 13625 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 13566 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 13565 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 13506 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 13505 cataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 13447 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 13446 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 13387 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 13386 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 13327 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13326 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 13267 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 13266 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 13208 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 13207 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 13148 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13147 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 13089
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 874 bits (441), Expect = 0.0 Identities = 607/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13743 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13684 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 13683 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 13626 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 13625 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 13566 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 13565 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 13506 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 13505 cataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 13447 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 13446 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 13387 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 13386 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 13327 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13326 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 13267 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 13266 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 13208 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 13207 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 13148 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13147 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 13089
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 874 bits (441), Expect = 0.0 Identities = 607/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7761957 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 7761898 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 7761897 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 7761840 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 7761839 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 7761780 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 7761779 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 7761720 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 7761719 cataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 7761661 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 7761660 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 7761601 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 7761600 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 7761541 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7761540 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 7761481 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 7761480 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 7761422 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 7761421 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 7761362 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7761361 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 7761303 Score = 858 bits (433), Expect = 0.0 Identities = 606/659 (91%), Gaps = 9/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33565753 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 33565694 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 33565693 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 33565636 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 33565635 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 33565576 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 33565575 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 33565516 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 33565515 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 33565457 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 || ||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 33565456 ataaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 33565397 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 33565396 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 33565337 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 33565336 tttcagctcggtggaaacccaattcttttc-tcaggatctcttaaatgaaattagggaac 33565278 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 33565277 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 33565219 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 33565218 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 33565159 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33565158 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 33565100 Score = 490 bits (247), Expect = e-135 Identities = 316/337 (93%), Gaps = 4/337 (1%) Strand = Plus / Minus Query: 323 ttccaatcgtaactaaatcttcttttgttaaa---ggataaggaagccaaatagctaaaa 379 |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| Sbjct: 33498520 ttccaatcgtaactaaatcttcttttgttaaaaaaggaaatggaagccaaatagctaaaa 33498461 Query: 380 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 439 |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 33498460 aacggtagttttggtttactagaaccatcagcatattgtttcagctcggtggaaacccaa 33498401 Query: 440 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 499 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| Sbjct: 33498400 ttcttttcctcaggatctcttaaatgaaattagggaacgaagtaattagattagatagat 33498341 Query: 500 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 559 |||| | ||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 33498340 ttaggca-aatttctatctcctactctttagggatcatctagaaagcagagagccttggt 33498282 Query: 560 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 |||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 33498281 tccattcagacaaaaaagctgacttagatgttaagtggtgagaatacccataaaggagcc 33498222 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 33498221 gaatgaaatcaaaatttcatgttcggttttgaattag 33498185 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33504266 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 33504325 Query: 62 atccttaag 70 |||||||| Sbjct: 33504326 gtccttaag 33504334 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 atattccgatgaaaactttagttctt 105 ||||||||| |||||||||||||||| Sbjct: 32302925 atattccgacgaaaactttagttctt 32302950 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 ggatctcttgaatgaaattag 472 ||||||||||||||||||||| Sbjct: 23726594 ggatctcttgaatgaaattag 23726614
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 874 bits (441), Expect = 0.0 Identities = 607/659 (92%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64538 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 64479 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 64478 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 64421 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 64420 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 64361 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 64360 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 64301 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 64300 cataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 64242 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 64241 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 64182 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 64181 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 64122 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 64121 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 64062 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 64061 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 64003 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 64002 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 63943 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63942 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 63884
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 866 bits (437), Expect = 0.0 Identities = 606/659 (91%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11961 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 11902 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 11901 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 11844 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 11843 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 11784 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 11783 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 11724 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 11723 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 11665 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||| ||||||||||| ||| Sbjct: 11664 atgaagatacaaaaaaatttatttccaatcgtaactaaatctacttttgttaaaaaagga 11605 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 11604 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 11545 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11544 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 11485 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 |||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 11484 aaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 11426 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 11425 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 11366 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11365 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11307
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 866 bits (437), Expect = 0.0 Identities = 606/659 (91%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86894 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 86835 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 86834 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 86777 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 86776 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 86717 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 86716 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 86657 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 86656 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 86598 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||| ||||||||||| ||| Sbjct: 86597 atgaagatacaaaaaaatttatttccaatcgtaactaaatctacttttgttaaaaaagga 86538 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 86537 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 86478 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 86477 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 86418 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 |||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 86417 aaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 86359 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 86358 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 86299 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86298 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 86240
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 866 bits (437), Expect = 0.0 Identities = 606/659 (91%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10305569 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 10305510 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 10305509 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 10305452 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 10305451 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 10305392 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 10305391 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 10305332 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 10305331 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 10305273 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||| ||||||||||| ||| Sbjct: 10305272 atgaagatacaaaaaaatttatttccaatcgtaactaaatctacttttgttaaaaaagga 10305213 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 10305212 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 10305153 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10305152 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 10305093 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 |||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 10305092 aaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 10305034 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 10305033 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 10304974 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10304973 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 10304915 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 533 atcatctagaaagcagagagctttg 557 |||||||||||||||| |||||||| Sbjct: 21068724 atcatctagaaagcagcgagctttg 21068700
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 866 bits (437), Expect = 0.0 Identities = 606/659 (91%), Gaps = 8/659 (1%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14382576 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 14382635 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 14382636 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 14382693 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 14382694 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 14382753 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 14382754 taattgaaattgcatccaaaaaacaaataggatttcgattatgagtacagagtcgcgaag 14382813 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 14382814 cataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 14382872 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 14382873 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 14382932 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| Sbjct: 14382933 aatggaagccaaatagctaaaaaacggtagttttggtttactagagccatcagcatattg 14382992 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14382993 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 14383052 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 14383053 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 14383111 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 14383112 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 14383171 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14383172 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 14383230 Score = 149 bits (75), Expect = 1e-32 Identities = 125/139 (89%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 156 cattctggcgatttgtacccaaaaactaatttaaattgcatccaaaataaaaattggatt 215 |||||||||||||||||||| || ||||||| ||||||||||||||| | ||||| |||| Sbjct: 12183038 cattctggcgatttgtacccgaagactaattaaaattgcatccaaaaaacaaattagatt 12182979 Query: 216 atga-tatgagtacagagtcgcgaagcataattttgcattggatttaagtattccaattt 274 || ||||||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 12182978 tggattatgagtacagagtcgcgaagcataattttgcattcga-ttaaggattccaattt 12182920 Query: 275 tgaaaatatgagtaaagga 293 | ||||||| ||||||||| Sbjct: 12182919 ttaaaatatcagtaaagga 12182901
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 866 bits (437), Expect = 0.0 Identities = 606/659 (91%), Gaps = 8/659 (1%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104498 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 104557 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 104558 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 104615 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 104616 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 104675 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 104676 taattgaaattgcatccaaaaaacaaataggatttcgattatgagtacagagtcgcgaag 104735 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 104736 cataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 104794 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 104795 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 104854 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| Sbjct: 104855 aatggaagccaaatagctaaaaaacggtagttttggtttactagagccatcagcatattg 104914 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104915 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 104974 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 104975 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 105033 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 105034 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 105093 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105094 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 105152
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 866 bits (437), Expect = 0.0 Identities = 606/659 (91%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10311608 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 10311549 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 10311548 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 10311491 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 10311490 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 10311431 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 10311430 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 10311371 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 10311370 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 10311312 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||| ||||||||||| ||| Sbjct: 10311311 atgaagatacaaaaaaatttatttccaatcgtaactaaatctacttttgttaaaaaagga 10311252 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 10311251 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 10311192 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10311191 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 10311132 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 |||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 10311131 aaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 10311073 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 10311072 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 10311013 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10311012 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 10310954 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 533 atcatctagaaagcagagagctttg 557 |||||||||||||||| |||||||| Sbjct: 21079988 atcatctagaaagcagcgagctttg 21079964
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 858 bits (433), Expect = 0.0 Identities = 606/659 (91%), Gaps = 9/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13740 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13681 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 13680 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 13623 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 13622 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 13563 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 13562 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 13503 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 13502 -ataattttgcattggatt-aaggattccaattttttaaatatgagtaaaggatctatgg 13445 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 13444 atgaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 13385 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 13384 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 13325 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13324 tttcagctcggtggaaacccaattcttttcctcaggatctcttaaatgaaattagggaac 13265 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 13264 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 13206 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 13205 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 13146 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13145 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 13087
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 858 bits (433), Expect = 0.0 Identities = 606/659 (91%), Gaps = 9/659 (1%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110950 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 110891 Query: 62 atccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaatcc 121 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 110890 gtccttaaggtttttt--atattccgatgaaaactttagttcttagaaaggatttactcc 110833 Query: 122 ttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaaaac 181 |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| || Sbjct: 110832 tttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaagac 110773 Query: 182 taatttaaattgcatccaaaataaaaattggattatgat-atgagtacagagtcgcgaag 240 ||||| ||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| Sbjct: 110772 taattgaaattgcatccaaaaaacaaataggatttggattatgagtacagagtcgcgaag 110713 Query: 241 cataattttgcattggatttaagtattccaattttgaaaatatgagtaaaggatctatgg 300 ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 110712 cataattttgcattggatt-aaggattccaatttttaaaatatgagtaaaggatctatgg 110654 Query: 301 atgaagatacaaaaaagttgatttccaatcgtaactaaatcttcttttgttaaa---gga 357 || ||||||||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 110653 ataaagatacaaaaaaatttatttccaatcgtaactaaatcttcttttgttaaaaaagga 110594 Query: 358 taaggaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattg 417 | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 110593 aatggaagccaaatagctaaaaaacggtagttttggtttactagaaccatcagcatattg 110534 Query: 418 tttcagctcggtggaaacccaattcttttcctcaggatctcttgaatgaaattagggaac 477 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 110533 tttcagctcggtggaaacccaattcttttc-tcaggatctcttaaatgaaattagggaac 110475 Query: 478 gaagtaagtagattagatggatttagatagaatttctatctcctactctataaggatcat 537 ||||||| |||||||||| ||||||| | ||||||||||||||||||| || ||||||| Sbjct: 110474 gaagtaattagattagatagatttaggca-aatttctatctcctactctttagggatcat 110416 Query: 538 ctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtgg 597 |||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||| Sbjct: 110415 ctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtgg 110356 Query: 598 tgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110355 tgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 110297 Score = 490 bits (247), Expect = e-135 Identities = 316/337 (93%), Gaps = 4/337 (1%) Strand = Plus / Minus Query: 323 ttccaatcgtaactaaatcttcttttgttaaa---ggataaggaagccaaatagctaaaa 379 |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| Sbjct: 43717 ttccaatcgtaactaaatcttcttttgttaaaaaaggaaatggaagccaaatagctaaaa 43658 Query: 380 aacgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaa 439 |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 43657 aacggtagttttggtttactagaaccatcagcatattgtttcagctcggtggaaacccaa 43598 Query: 440 ttcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggat 499 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| Sbjct: 43597 ttcttttcctcaggatctcttaaatgaaattagggaacgaagtaattagattagatagat 43538 Query: 500 ttagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggt 559 |||| | ||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 43537 ttaggca-aatttctatctcctactctttagggatcatctagaaagcagagagccttggt 43479 Query: 560 tccattcaaatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 |||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 43478 tccattcagacaaaaaagctgacttagatgttaagtggtgagaatacccataaaggagcc 43419 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 43418 gaatgaaatcaaaatttcatgttcggttttgaattag 43382 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49463 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 49522 Query: 62 atccttaag 70 |||||||| Sbjct: 49523 gtccttaag 49531
>gb|AY941128.1| Paspalum haumanii tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 751 bits (379), Expect = 0.0 Identities = 537/587 (91%), Gaps = 17/587 (2%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| | ||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagaataattgaatttgcatcca 471 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 470 aaataaaaattcgat-----tatgagtacggagtcgcgaagcataattttgcattgga-t 417 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 taagtattccgattttaaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 357 Query: 320 gatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaat 371 ||||||||||||||||||||||||||||||| |||||| | ||||||| ||| Sbjct: 356 tatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaat 297 Query: 372 agctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtgg 431 ||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 296 agctaaaaaacaagggttttggtttactagaaccatcagtatattgtttcagctcggcgg 237 Query: 432 aaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 491 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 aaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 177 Query: 492 agatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcaga 549 |||| | |||||| | ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 176 agatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcaga 118 Query: 550 gagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcca 609 |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| Sbjct: 117 gagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcca 58 Query: 610 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941131.1| Paspalum quadrifarium tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 743 bits (375), Expect = 0.0 Identities = 536/587 (91%), Gaps = 17/587 (2%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| | ||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagaataattgaatttgcatcca 471 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 470 aaataaaaattcgat-----tatgagtacggagtcgcgaagcataattttgcattgga-t 417 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 taagtattccgatttaaaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 357 Query: 320 gatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaat 371 ||||||||||||||||||||||||||||||| |||||| | ||||||| ||| Sbjct: 356 tatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaat 297 Query: 372 agctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtgg 431 ||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 296 agctaaaaaacaagggttttggtttactagaaccatcagtatattgtttcagctcggcgg 237 Query: 432 aaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 491 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 aaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 177 Query: 492 agatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcaga 549 |||| | |||||| | ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 176 agatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcaga 118 Query: 550 gagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcca 609 |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| Sbjct: 117 gagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcca 58 Query: 610 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941129.1| Paspalum intermedium tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 743 bits (375), Expect = 0.0 Identities = 536/587 (91%), Gaps = 17/587 (2%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| | ||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagaataattgaatttgcatcca 471 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 470 aaatacaaattcgat-----tatgagtacggagtcgcgaagcataattttgcattgga-t 417 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 taagtattccgatttttaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 357 Query: 320 gatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaat 371 ||||||||||||||||||||||||||||||| |||||| | ||||||| ||| Sbjct: 356 tatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaat 297 Query: 372 agctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtgg 431 ||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 296 agctaaaaaacaagggttttggtttactagaaccatcagtatattgtttcagctcggcgg 237 Query: 432 aaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 491 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 aaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 177 Query: 492 agatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcaga 549 |||| | |||||| | ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 176 agatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcaga 118 Query: 550 gagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcca 609 |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| Sbjct: 117 gagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcca 58 Query: 610 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941135.1| Paspalum quadrifarium tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 735 bits (371), Expect = 0.0 Identities = 535/587 (91%), Gaps = 17/587 (2%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| | ||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagaataattgaatttgcatcca 471 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 470 aaatacaaattcgat-----tatgagtacggagtcgcgaagcataattttgcattgga-t 417 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 taagtattccgattttttaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 357 Query: 320 gatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaat 371 ||||||||||||||||||||||||||||||| |||||| | ||||||| ||| Sbjct: 356 tatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaat 297 Query: 372 agctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtgg 431 ||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 296 agctaaaaaacaagggttttggtttactagaaccatcagtatattgtttcagctcggcgg 237 Query: 432 aaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 491 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 aaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 177 Query: 492 agatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcaga 549 |||| | |||||| | ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 176 agatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcaga 118 Query: 550 gagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcca 609 |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| Sbjct: 117 gagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcca 58 Query: 610 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941134.1| Paspalum exaltatum tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 735 bits (371), Expect = 0.0 Identities = 535/587 (91%), Gaps = 17/587 (2%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| | ||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagaataattgaatttgcatcca 471 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 470 aaatacaaattcgat-----tatgagtacggagtcgcgaagcataattttgcattgga-t 417 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 taagtattccgattttttaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 357 Query: 320 gatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaat 371 ||||||||||||||||||||||||||||||| |||||| | ||||||| ||| Sbjct: 356 tatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaat 297 Query: 372 agctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtgg 431 ||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 296 agctaaaaaacaagggttttggtttactagaaccatcagtatattgtttcagctcggcgg 237 Query: 432 aaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 491 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 aaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 177 Query: 492 agatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcaga 549 |||| | |||||| | ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 176 agatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcaga 118 Query: 550 gagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcca 609 |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| Sbjct: 117 gagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcca 58 Query: 610 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941133.1| Paspalum quarinii tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 735 bits (371), Expect = 0.0 Identities = 535/587 (91%), Gaps = 17/587 (2%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||| ||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattctgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| | ||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagaataattgaatttgcatcca 471 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 470 aaatacaaattcgat-----tatgagtacggagtcgcgaagcataattttgcattgga-t 417 Query: 260 taagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 319 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 taagtattccgatttttaaaatatgagtaaaggatctatggatgaagatacaaaaaagtt 357 Query: 320 gatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaat 371 ||||||||||||||||||||||||||||||| |||||| | ||||||| ||| Sbjct: 356 tatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaat 297 Query: 372 agctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtgg 431 ||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 296 agctaaaaaacaagggttttggtttactagaaccatcagtatattgtttcagctcggcgg 237 Query: 432 aaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 491 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 aaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagatt 177 Query: 492 agatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcaga 549 |||| | |||||| | ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 176 agatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcaga 118 Query: 550 gagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcca 609 |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| Sbjct: 117 gagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcca 58 Query: 610 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 taaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941132.1| Axonopus rosengurttii tRNA-Gly (trnG) gene, intron; chloroplast Length = 603 Score = 731 bits (369), Expect = 0.0 Identities = 536/588 (91%), Gaps = 19/588 (3%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgatgaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| ||||||| || ||||||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaagactaattgaatttgcatcca 471 Query: 200 aaataaaaattggattatga-tatgagtacagagtcgcgaagcataattttgcattggat 258 ||||| ||||| |||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 470 aaatacaaattcgattatgagtatga------agtcgcgaagcataattttgctttggat 417 Query: 259 ttaagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagt 318 | ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 416 t-aagtattccgattgaataaatacgagtaaaggatctatggatgaagatacaaaaaagt 358 Query: 319 tgatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaa 370 | ||||||||||||||||||||||||||||||| |||||| | ||||||| || Sbjct: 357 ttatttccaatcgtaactaaatcttcttttgttttgtttaaaaaggaaatggaagcccaa 298 Query: 371 tagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtg 430 |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 297 tagctaaaaaacgagggttttggtttactagaaccatcagtatattgtttcagctcggcg 238 Query: 431 gaaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 gaaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtggat 178 Query: 491 tagatggat--ttagatagaatttctatctcctactctataaggatcatctagaaagcag 548 ||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 177 tagatagatatttagg-agaatttctatctcctactctatagggatcatctagaaagcag 119 Query: 549 agagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcc 608 ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| Sbjct: 118 agagctttggttccattcagacagaaaagctgacatagatgttaagcggtgagaatatcc 59 Query: 609 ataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 ataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AY941130.1| Paspalum rufum tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 698 bits (352), Expect = 0.0 Identities = 533/588 (90%), Gaps = 19/588 (3%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 590 atattccgattaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 531 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattg-catcc 198 |||||||||||||||||||||| |||||| ||| |||| | ||||| || ||| ||||| Sbjct: 530 attgaggaagaatatacattctcgcgattagtatccaaggaataattgaatttggcatcc 471 Query: 199 aaaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggat 258 |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 470 aaaatacaaattcgattatga-----gtacggagtcgcgaagcataattttgcattggat 416 Query: 259 ttaagtattccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagt 318 | ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 t-aagtattccgattttaaaaatatgagtaaaggatctatggatgaggatacaaaaaagt 357 Query: 319 tgatttccaatcgtaactaaatcttcttttgtt--------aaaggataaggaagccaaa 370 | ||||||||||||||||||||||||||||||| |||||| | ||||||| || Sbjct: 356 ttatttccaatcgtaactaaatcttcttttgttttgttcaaaaaggaaatggaagcccaa 297 Query: 371 tagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtg 430 ||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 296 tagct-aaaaacgagggttttggtttactagaaccatcagtatattgtttcagctcggcg 238 Query: 431 gaaacccaattcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagat 490 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 gaaacccaattcttctcctcaggatctcttgaatgaaattagggaacgaagtaagtagat 178 Query: 491 tagatgg--atttagatagaatttctatctcctactctataaggatcatctagaaagcag 548 ||||| | |||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 177 tagatagatatttag-gataatttctatctcctattctatagggatcatctagaaagcag 119 Query: 549 agagctttggttccattcaaatagaaaagctgacatagatgttaagtggtgagaatatcc 608 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| Sbjct: 118 agagctttggttccattcagacggaaaagctgacatagatgttaagcggtgagaatatcc 59 Query: 609 ataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 ataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 11
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 543 bits (274), Expect = e-151 Identities = 362/388 (93%), Gaps = 10/388 (2%) Strand = Plus / Minus Query: 278 aaatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaacta 337 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75746 aaatatgagtaaaggatctatggatgaagatacaaaaaagtttatttccaatcgtaacta 75687 Query: 338 aatcttcttttgttaa--aggataaggaagccaaatagctaaaaaacgatagttttggtt 395 |||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||||| Sbjct: 75686 aatcttcttttgttttgtaggaaatggaagcccaatagctaaaaaacgatggttttggtt 75627 Query: 396 tactagaaccatccg-----catattgtttcagctcggtggaaacccaattcttttcctc 450 ||||||||||||| | |||||||||||||||||||||||||||| |||||||||| Sbjct: 75626 tactagaaccatcagtatattatattgtttcagctcggtggaaacccaactcttttcctc 75567 Query: 451 aggatctcttgaatgaaattagggaacgaagtaagtagattagatgg--atttagataga 508 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct: 75566 aggatctcttgaatgaaattagggaacgaagtaagtagattagatagatatttag-gaga 75508 Query: 509 atttctatctcctactctataaggatcatctagaaagcagagagctttggttccattcaa 568 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 75507 atttctatctcctactctatagggatcatctagaaagcggagagctttggttccattcag 75448 Query: 569 atagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 628 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75447 acagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 75388 Query: 629 caaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||||||||| Sbjct: 75387 caaaatttcatgttcggttttgaattag 75360 Score = 202 bits (102), Expect = 1e-48 Identities = 169/190 (88%), Gaps = 6/190 (3%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 75950 atattccgatgaaaactttagttcttataaagggtttaatccttttcctctcaatagcat 75891 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| ||||||| || ||||||| | Sbjct: 75890 attgaggaagaatatacattctcgcgattagtatccaaagactaattgaatttgcatcta 75831 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| ||| || |||||| |||||||||||| |||||||||||||| | Sbjct: 75830 aaatacaaattcgat-----taggagtacgtagtcgcgaagcaaaattttgcattgga-t 75777 Query: 260 taagtattcc 269 |||||||||| Sbjct: 75776 taagtattcc 75767 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76032 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 75973 Query: 62 atccttaag 70 ||||||||| Sbjct: 75972 atccttaag 75964
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 543 bits (274), Expect = e-151 Identities = 362/388 (93%), Gaps = 10/388 (2%) Strand = Plus / Minus Query: 278 aaatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaacta 337 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14119 aaatatgagtaaaggatctatggatgaagatacaaaaaagtttatttccaatcgtaacta 14060 Query: 338 aatcttcttttgttaa--aggataaggaagccaaatagctaaaaaacgatagttttggtt 395 |||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||||| Sbjct: 14059 aatcttcttttgttttgtaggaaatggaagcccaatagctaaaaaacgatggttttggtt 14000 Query: 396 tactagaaccatccg-----catattgtttcagctcggtggaaacccaattcttttcctc 450 ||||||||||||| | |||||||||||||||||||||||||||| |||||||||| Sbjct: 13999 tactagaaccatcagtatattatattgtttcagctcggtggaaacccaactcttttcctc 13940 Query: 451 aggatctcttgaatgaaattagggaacgaagtaagtagattagatgg--atttagataga 508 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct: 13939 aggatctcttgaatgaaattagggaacgaagtaagtagattagatagatatttag-gaga 13881 Query: 509 atttctatctcctactctataaggatcatctagaaagcagagagctttggttccattcaa 568 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 13880 atttctatctcctactctatagggatcatctagaaagcggagagctttggttccattcag 13821 Query: 569 atagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 628 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13820 acagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 13761 Query: 629 caaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||||||||| Sbjct: 13760 caaaatttcatgttcggttttgaattag 13733 Score = 194 bits (98), Expect = 3e-46 Identities = 168/190 (88%), Gaps = 6/190 (3%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 14323 atattccgatgagaactttagttcttataaagggtttaatccttttcctctcaatagcat 14264 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| |||||| ||| ||||| ||||||| || ||||||| | Sbjct: 14263 attgaggaagaatatacattctcgcgattagtatccaaagactaattgaatttgcatcta 14204 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| ||| || |||||| |||||||||||| |||||||||||||| | Sbjct: 14203 aaatacaaattcgat-----taggagtacgtagtcgcgaagcaaaattttgcattgga-t 14150 Query: 260 taagtattcc 269 |||||||||| Sbjct: 14149 taagtattcc 14140 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14405 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 14346 Query: 62 atccttaag 70 ||||||||| Sbjct: 14345 atccttaag 14337
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 527 bits (266), Expect = e-146 Identities = 360/388 (92%), Gaps = 10/388 (2%) Strand = Plus / Minus Query: 278 aaatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaacta 337 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 13715 aaatatgagtaaaggatctatggatgaagatacaaaaaaggttatttccaatcgtaacta 13656 Query: 338 aatcttcttttgttaa--aggataaggaagccaaatagctaaaaaacgatagttttggtt 395 |||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||||| Sbjct: 13655 aatcttcttttgttttgtaggaaatggaagcccaatagctaaaaaacgatggttttggtt 13596 Query: 396 tactagaaccatccg-----catattgtttcagctcggtggaaacccaattcttttcctc 450 ||||||||||||| | |||||||||||||||||||||||||||| |||||||||| Sbjct: 13595 tactagaaccatcagtatattatattgtttcagctcggtggaaacccaactcttttcctc 13536 Query: 451 aggatctcttgaatgaaattagggaacgaagtaagtagattagatgg--atttagataga 508 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct: 13535 aggatctcttgaatgaaattagggaacgaagtaagtagattagatagatatttag-gaga 13477 Query: 509 atttctatctcctactctataaggatcatctagaaagcagagagctttggttccattcaa 568 |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 13476 atttctatctcctattctatagggatcatctagaaagcggagagctttggttccattcag 13417 Query: 569 atagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 628 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13416 acagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 13357 Query: 629 caaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||||||||| Sbjct: 13356 caaaatttcatgttcggttttgaattag 13329 Score = 202 bits (102), Expect = 1e-48 Identities = 169/190 (88%), Gaps = 6/190 (3%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 13919 atattccgatgaaaactttagttcttataaaggatttaatccttttcctctcaatagcat 13860 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| ||||| ||| ||||| ||||||| || ||||||| | Sbjct: 13859 attgaggaagaatatacattctcccgattagtatccaaagactaattgaatttgcatcta 13800 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| |||||||| |||| ||||||||| |||||||||||||||| | Sbjct: 13799 aaatacaaattcgattatga-----gtacgtagtcgcgaacgataattttgcattgga-t 13746 Query: 260 taagtattcc 269 |||||||||| Sbjct: 13745 taagtattcc 13736 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14001 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13942 Query: 62 atccttaag 70 ||||||||| Sbjct: 13941 atccttaag 13933
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 527 bits (266), Expect = e-146 Identities = 360/388 (92%), Gaps = 10/388 (2%) Strand = Plus / Minus Query: 278 aaatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaacta 337 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 13709 aaatatgagtaaaggatctatggatgaagatacaaaaaaggttatttccaatcgtaacta 13650 Query: 338 aatcttcttttgttaa--aggataaggaagccaaatagctaaaaaacgatagttttggtt 395 |||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||||| Sbjct: 13649 aatcttcttttgttttgtaggaaatggaagcccaatagctaaaaaacgatggttttggtt 13590 Query: 396 tactagaaccatccg-----catattgtttcagctcggtggaaacccaattcttttcctc 450 ||||||||||||| | |||||||||||||||||||||||||||| |||||||||| Sbjct: 13589 tactagaaccatcagtatattatattgtttcagctcggtggaaacccaactcttttcctc 13530 Query: 451 aggatctcttgaatgaaattagggaacgaagtaagtagattagatgg--atttagataga 508 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct: 13529 aggatctcttgaatgaaattagggaacgaagtaagtagattagatagatatttag-gaga 13471 Query: 509 atttctatctcctactctataaggatcatctagaaagcagagagctttggttccattcaa 568 |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 13470 atttctatctcctattctatagggatcatctagaaagcggagagctttggttccattcag 13411 Query: 569 atagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 628 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13410 acagaaaagctgacatagatgttaagtggtgagaatatccataaaggagccgaatgaaat 13351 Query: 629 caaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||||||||| Sbjct: 13350 caaaatttcatgttcggttttgaattag 13323 Score = 218 bits (110), Expect = 2e-53 Identities = 171/190 (90%), Gaps = 6/190 (3%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaatagcat 139 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 13913 atattccgatgaaaactttagttcttataaaggatttaatccttttcctctcaatagcat 13854 Query: 140 attgaggaagaatatacattctggcgatttgtacccaaaaactaatttaaattgcatcca 199 |||||||||||||||||||||| ||||| ||| ||||| ||||||| || ||||||| | Sbjct: 13853 attgaggaagaatatacattctcccgattagtatccaaagactaattgaatttgcatcta 13794 Query: 200 aaataaaaattggattatgatatgagtacagagtcgcgaagcataattttgcattggatt 259 ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 13793 aaatacaaattcgattatga-----gtacgtagtcgcgaagcataattttgcattgga-t 13740 Query: 260 taagtattcc 269 |||||||||| Sbjct: 13739 taagtattcc 13730 Score = 137 bits (69), Expect = 5e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13995 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 13936 Query: 62 atccttaag 70 ||||||||| Sbjct: 13935 atccttaag 13927
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 523 bits (264), Expect = e-145 Identities = 366/397 (92%), Gaps = 6/397 (1%) Strand = Plus / Plus Query: 265 attccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagttgattt 324 ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 19332199 attccaatttttaaaatatgagtaaaggatctatggatgaagatacaaaaaaatttattt 19332258 Query: 325 ccaatcgtaactaaatcttcttttgttaaa----ggataaggaagccaaatagctaaaaa 380 |||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 19332259 ccaatcataactaaatcttcttttgttaaaaaaaggaaatggaagccaaatagctaaaaa 19332318 Query: 381 acgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaat 440 ||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 19332319 acggtagttttggtttacaagaaccatcagcatattgtttcagcttggtggaaacccaat 19332378 Query: 441 tcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggatt 500 ||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 19332379 tcttttcctcatgatctcttaaatgaaattagagaacgaagtaattagattagatagatt 19332438 Query: 501 tagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggtt 560 ||| | ||||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 19332439 taggca-aatttctatctcctactctttagggatcatctagaaagcagagagccttggtt 19332497 Query: 561 ccattca-aatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 ||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 19332498 ccattcatacaaaaaaagctgacttagatgttaagtggtgagaatacccataaaggagcc 19332557 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 19332558 gaatgaaatcaaaatttcatgttcggttttgaattag 19332594 Score = 230 bits (116), Expect = 5e-57 Identities = 214/246 (86%), Gaps = 7/246 (2%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta---ataactgaatttgaaatgatatacttaa 58 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 19331954 tagtggtaaaagtgtgattcgttctattattaataattgaatttgaaatgatatacttaa 19332013 Query: 59 ggcatccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaa 118 ||| |||||| | ||||||||||||||||||||||||||| |||||||| | Sbjct: 19332014 ggcgtccttatgtttttt---atattccgatgaaaactttagttcttagaaaggatttac 19332070 Query: 119 tccttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaa 178 ||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| Sbjct: 19332071 tcctttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaa 19332130 Query: 179 aactaatttaaattgcatccaaaataaaaattggattatga-tatgagtacagagtcgcg 237 ||||||| ||||||||| ||||| | |||||||||| || || |||||||||||| || Sbjct: 19332131 gactaattgaaattgcatgcaaaaaacaaattggatttggattacgagtacagagtcacg 19332190 Query: 238 aagcat 243 |||||| Sbjct: 19332191 aagcat 19332196
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 523 bits (264), Expect = e-145 Identities = 366/397 (92%), Gaps = 6/397 (1%) Strand = Plus / Plus Query: 265 attccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagttgattt 324 ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 19258426 attccaatttttaaaatatgagtaaaggatctatggatgaagatacaaaaaaatttattt 19258485 Query: 325 ccaatcgtaactaaatcttcttttgttaaa----ggataaggaagccaaatagctaaaaa 380 |||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 19258486 ccaatcataactaaatcttcttttgttaaaaaaaggaaatggaagccaaatagctaaaaa 19258545 Query: 381 acgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaat 440 ||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 19258546 acggtagttttggtttacaagaaccatcagcatattgtttcagcttggtggaaacccaat 19258605 Query: 441 tcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggatt 500 ||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 19258606 tcttttcctcatgatctcttaaatgaaattagagaacgaagtaattagattagatagatt 19258665 Query: 501 tagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggtt 560 ||| | ||||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 19258666 taggca-aatttctatctcctactctttagggatcatctagaaagcagagagccttggtt 19258724 Query: 561 ccattca-aatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 ||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 19258725 ccattcatacaaaaaaagctgacttagatgttaagtggtgagaatacccataaaggagcc 19258784 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 19258785 gaatgaaatcaaaatttcatgttcggttttgaattag 19258821 Score = 230 bits (116), Expect = 5e-57 Identities = 214/246 (86%), Gaps = 7/246 (2%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta---ataactgaatttgaaatgatatacttaa 58 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 19258181 tagtggtaaaagtgtgattcgttctattattaataattgaatttgaaatgatatacttaa 19258240 Query: 59 ggcatccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaa 118 ||| |||||| | ||||||||||||||||||||||||||| |||||||| | Sbjct: 19258241 ggcgtccttatgtttttt---atattccgatgaaaactttagttcttagaaaggatttac 19258297 Query: 119 tccttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaa 178 ||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| Sbjct: 19258298 tcctttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaa 19258357 Query: 179 aactaatttaaattgcatccaaaataaaaattggattatga-tatgagtacagagtcgcg 237 ||||||| ||||||||| ||||| | |||||||||| || || |||||||||||| || Sbjct: 19258358 gactaattgaaattgcatgcaaaaaacaaattggatttggattacgagtacagagtcacg 19258417 Query: 238 aagcat 243 |||||| Sbjct: 19258418 aagcat 19258423
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 523 bits (264), Expect = e-145 Identities = 366/397 (92%), Gaps = 6/397 (1%) Strand = Plus / Plus Query: 265 attccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagttgattt 324 ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 37810 attccaatttttaaaatatgagtaaaggatctatggatgaagatacaaaaaaatttattt 37869 Query: 325 ccaatcgtaactaaatcttcttttgttaaa----ggataaggaagccaaatagctaaaaa 380 |||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 37870 ccaatcataactaaatcttcttttgttaaaaaaaggaaatggaagccaaatagctaaaaa 37929 Query: 381 acgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaat 440 ||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 37930 acggtagttttggtttacaagaaccatcagcatattgtttcagcttggtggaaacccaat 37989 Query: 441 tcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggatt 500 ||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 37990 tcttttcctcatgatctcttaaatgaaattagagaacgaagtaattagattagatagatt 38049 Query: 501 tagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggtt 560 ||| | ||||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 38050 taggca-aatttctatctcctactctttagggatcatctagaaagcagagagccttggtt 38108 Query: 561 ccattca-aatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 ||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 38109 ccattcatacaaaaaaagctgacttagatgttaagtggtgagaatacccataaaggagcc 38168 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 38169 gaatgaaatcaaaatttcatgttcggttttgaattag 38205 Score = 230 bits (116), Expect = 5e-57 Identities = 214/246 (86%), Gaps = 7/246 (2%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta---ataactgaatttgaaatgatatacttaa 58 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 37565 tagtggtaaaagtgtgattcgttctattattaataattgaatttgaaatgatatacttaa 37624 Query: 59 ggcatccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaa 118 ||| |||||| | ||||||||||||||||||||||||||| |||||||| | Sbjct: 37625 ggcgtccttatgtttttt---atattccgatgaaaactttagttcttagaaaggatttac 37681 Query: 119 tccttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaa 178 ||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| Sbjct: 37682 tcctttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaa 37741 Query: 179 aactaatttaaattgcatccaaaataaaaattggattatga-tatgagtacagagtcgcg 237 ||||||| ||||||||| ||||| | |||||||||| || || |||||||||||| || Sbjct: 37742 gactaattgaaattgcatgcaaaaaacaaattggatttggattacgagtacagagtcacg 37801 Query: 238 aagcat 243 |||||| Sbjct: 37802 aagcat 37807
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 523 bits (264), Expect = e-145 Identities = 366/397 (92%), Gaps = 6/397 (1%) Strand = Plus / Plus Query: 265 attccaattttgaaaatatgagtaaaggatctatggatgaagatacaaaaaagttgattt 324 ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 9893 attccaatttttaaaatatgagtaaaggatctatggatgaagatacaaaaaaatttattt 9952 Query: 325 ccaatcgtaactaaatcttcttttgttaaa----ggataaggaagccaaatagctaaaaa 380 |||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 9953 ccaatcataactaaatcttcttttgttaaaaaaaggaaatggaagccaaatagctaaaaa 10012 Query: 381 acgatagttttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaat 440 ||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 10013 acggtagttttggtttacaagaaccatcagcatattgtttcagcttggtggaaacccaat 10072 Query: 441 tcttttcctcaggatctcttgaatgaaattagggaacgaagtaagtagattagatggatt 500 ||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 10073 tcttttcctcatgatctcttaaatgaaattagagaacgaagtaattagattagatagatt 10132 Query: 501 tagatagaatttctatctcctactctataaggatcatctagaaagcagagagctttggtt 560 ||| | ||||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 10133 taggca-aatttctatctcctactctttagggatcatctagaaagcagagagccttggtt 10191 Query: 561 ccattca-aatagaaaagctgacatagatgttaagtggtgagaatatccataaaggagcc 619 ||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 10192 ccattcatacaaaaaaagctgacttagatgttaagtggtgagaatacccataaaggagcc 10251 Query: 620 gaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||||||||||||||| Sbjct: 10252 gaatgaaatcaaaatttcatgttcggttttgaattag 10288 Score = 230 bits (116), Expect = 5e-57 Identities = 214/246 (86%), Gaps = 7/246 (2%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta---ataactgaatttgaaatgatatacttaa 58 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9648 tagtggtaaaagtgtgattcgttctattattaataattgaatttgaaatgatatacttaa 9707 Query: 59 ggcatccttaagnnnnnnnnnatattccgatgaaaactttagttcttataaaggattaaa 118 ||| |||||| | ||||||||||||||||||||||||||| |||||||| | Sbjct: 9708 ggcgtccttatgtttttt---atattccgatgaaaactttagttcttagaaaggatttac 9764 Query: 119 tccttttcctctcaatagcatattgaggaagaatatacattctggcgatttgtacccaaa 178 ||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| Sbjct: 9765 tcctttttctctcaatagcatattgaggaagaatatgcattttcgcgatttgtacccaaa 9824 Query: 179 aactaatttaaattgcatccaaaataaaaattggattatga-tatgagtacagagtcgcg 237 ||||||| ||||||||| ||||| | |||||||||| || || |||||||||||| || Sbjct: 9825 gactaattgaaattgcatgcaaaaaacaaattggatttggattacgagtacagagtcacg 9884 Query: 238 aagcat 243 |||||| Sbjct: 9885 aagcat 9890
>dbj|AK062877.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D01, full insert sequence Length = 553 Score = 190 bits (96), Expect = 4e-45 Identities = 114/120 (95%) Strand = Plus / Plus Query: 537 tctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgttaagtg 596 ||||||||||||||||| ||||||||||||| | | |||||||||| ||||||||||||| Sbjct: 1 tctagaaagcagagagccttggttccattcagacaaaaaagctgacttagatgttaagtg 60 Query: 597 gtgagaatatccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagaatacccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 120
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_D08 Length = 88854 Score = 149 bits (75), Expect = 1e-32 Identities = 125/139 (89%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 156 cattctggcgatttgtacccaaaaactaatttaaattgcatccaaaataaaaattggatt 215 |||||||||||||||||||| || ||||||| ||||||||||||||| | ||||| |||| Sbjct: 6499 cattctggcgatttgtacccgaagactaattaaaattgcatccaaaaaacaaattagatt 6440 Query: 216 atga-tatgagtacagagtcgcgaagcataattttgcattggatttaagtattccaattt 274 || ||||||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 6439 tggattatgagtacagagtcgcgaagcataattttgcattcga-ttaaggattccaattt 6381 Query: 275 tgaaaatatgagtaaagga 293 | ||||||| ||||||||| Sbjct: 6380 ttaaaatatcagtaaagga 6362
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 2e-28 Identities = 207/247 (83%), Gaps = 11/247 (4%) Strand = Plus / Plus Query: 220 tatgagtaca-gagtcgcgaagcataattttgcattggatttaagtattccaattttgaa 278 |||||||||| ||||| ||||||||||||||||||| ||| |||||| |||||||| || Sbjct: 23508971 tatgagtacaagagtcaggaagcataattttgcattgtatt-aagtat-ccaattttaaa 23509028 Query: 279 aatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaa 338 ||||||||||||||||||||||| ||||||| | |||| | |||| ||||||||||||| Sbjct: 23509029 aatatgagtaaaggatctatggaagaagataaagaaaa--ttattttcaatcgtaactaa 23509086 Query: 339 atcttcttttgtt-----aaaggataaggaagccaaatagc-taaaaaacgatagttttg 392 ||||| ||||||| |||||| ||| || |||| |||| |||| || | ||||||| Sbjct: 23509087 atcttgttttgttaaagaaaaggaaaagaaatccaagtagcttaaacaaaggtagtttta 23509146 Query: 393 gtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcctcag 452 ||||||||||| |||| ||||||||| ||| | |||||||| |||| |||||||| | Sbjct: 23509147 gtttactagaatcatcattatattgtttatgctagatggaaacctaattattttcctcgg 23509206 Query: 453 gatctct 459 ||||||| Sbjct: 23509207 gatctct 23509213 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 19542865 tagtggaaaaagtgtgattcgctctattaataactgagtttgaaatgatatacttaaggt 19542924 Query: 62 atccttaag 70 |||||||| Sbjct: 19542925 gtccttaag 19542933
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 135 bits (68), Expect = 2e-28 Identities = 207/247 (83%), Gaps = 11/247 (4%) Strand = Plus / Plus Query: 220 tatgagtaca-gagtcgcgaagcataattttgcattggatttaagtattccaattttgaa 278 |||||||||| ||||| ||||||||||||||||||| ||| |||||| |||||||| || Sbjct: 69364 tatgagtacaagagtcaggaagcataattttgcattgtatt-aagtat-ccaattttaaa 69421 Query: 279 aatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaa 338 ||||||||||||||||||||||| ||||||| | |||| | |||| ||||||||||||| Sbjct: 69422 aatatgagtaaaggatctatggaagaagataaagaaaa--ttattttcaatcgtaactaa 69479 Query: 339 atcttcttttgtt-----aaaggataaggaagccaaatagc-taaaaaacgatagttttg 392 ||||| ||||||| |||||| ||| || |||| |||| |||| || | ||||||| Sbjct: 69480 atcttgttttgttaaagaaaaggaaaagaaatccaagtagcttaaacaaaggtagtttta 69539 Query: 393 gtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcctcag 452 ||||||||||| |||| ||||||||| ||| | |||||||| |||| |||||||| | Sbjct: 69540 gtttactagaatcatcattatattgtttatgctagatggaaacctaattattttcctcgg 69599 Query: 453 gatctct 459 ||||||| Sbjct: 69600 gatctct 69606
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 135 bits (68), Expect = 2e-28 Identities = 207/247 (83%), Gaps = 11/247 (4%) Strand = Plus / Plus Query: 220 tatgagtaca-gagtcgcgaagcataattttgcattggatttaagtattccaattttgaa 278 |||||||||| ||||| ||||||||||||||||||| ||| |||||| |||||||| || Sbjct: 128868 tatgagtacaagagtcaggaagcataattttgcattgtatt-aagtat-ccaattttaaa 128925 Query: 279 aatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaa 338 ||||||||||||||||||||||| ||||||| | |||| | |||| ||||||||||||| Sbjct: 128926 aatatgagtaaaggatctatggaagaagataaagaaaa--ttattttcaatcgtaactaa 128983 Query: 339 atcttcttttgtt-----aaaggataaggaagccaaatagc-taaaaaacgatagttttg 392 ||||| ||||||| |||||| ||| || |||| |||| |||| || | ||||||| Sbjct: 128984 atcttgttttgttaaagaaaaggaaaagaaatccaagtagcttaaacaaaggtagtttta 129043 Query: 393 gtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcctcag 452 ||||||||||| |||| ||||||||| ||| | |||||||| |||| |||||||| | Sbjct: 129044 gtttactagaatcatcattatattgtttatgctagatggaaacctaattattttcctcgg 129103 Query: 453 gatctct 459 ||||||| Sbjct: 129104 gatctct 129110
>gb|AY727225.1| Trillium ovatum tRNA-Gly (trnG), intron; chloroplast Length = 674 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 371 tagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtg 430 |||||| |||||| | |||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 343 tagctagaaaacggtggttttggtttactagaaccatcggcatattgtttccgctcggtg 402 Query: 431 gaaacccaattcttttcctcaggatc 456 |||||| ||||||||||||||||||| Sbjct: 403 gaaaccaaattcttttcctcaggatc 428 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 589 tccataaaggagccgaatgaaagaaaaatttcatgttcggttttgaattag 639 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||| ||||||| ||||||| Sbjct: 67 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatggcatatttgaggaag 125 Query: 150 aatatacattctggcgatttgtacccaaa 178 |||||||||||| ||||||||| ||||| Sbjct: 126 aatatacattctcacgatttgtatccaaa 154 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||| |||||| |||||| ||||||| ||| ||| ||||||||||||||||| || Sbjct: 247 tatgagtcaaggatacatggataaagatacgaaa--gtttatttccaatcgtaactagat 304 Query: 341 cttc 344 |||| Sbjct: 305 cttc 308 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 attcaaatagaaaagctgacatagatgtta 592 ||||| ||| |||||||||||||||||||| Sbjct: 524 attcagataaaaaagctgacatagatgtta 553 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 gtgtgattcgttctattaataact 36 ||||||||||||||||||| |||| Sbjct: 1 gtgtgattcgttctattaacaact 24
>gb|AY727223.1| Pseudotrillium rivale tRNA-Gly (trnG), intron; chloroplast Length = 674 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 371 tagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtg 430 |||||| |||||| | |||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 343 tagctagaaaacggtggttttggtttactagaaccatcggcatattgtttctgctcggtg 402 Query: 431 gaaacccaattcttttcctcaggatc 456 |||||| ||||||||||||||||||| Sbjct: 403 gaaaccaaattcttttcctcaggatc 428 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 589 tccataaaggagccgaatgaaagaaaaatttcatgttcggttttgaattag 639 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||| ||||||| ||||||| Sbjct: 67 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatggcatatttgaggaag 125 Query: 150 aatatacattctggcgatttgtacccaaa 178 |||||||||||| ||||||||| ||||| Sbjct: 126 aatatacattctcacgatttgtatccaaa 154 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||| |||||| |||||| ||||||||||| ||| ||||||||||||||||| || Sbjct: 247 tatgagtcaaggatacatggataaagatacaaaa--gtttatttccaatcgtaactagat 304 Query: 341 cttc 344 |||| Sbjct: 305 cttc 308 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 attcaaatagaaaagctgacatagatgtta 592 ||||| ||| |||||||||||||||||||| Sbjct: 524 attcagataaaaaagctgacatagatgtta 553 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 gtgtgattcgttctattaataact 36 ||||||||||||||||||| |||| Sbjct: 1 gtgtgattcgttctattaacaact 24
>gb|AY727224.1| Trillium texanum tRNA-Gly (trnG), intron; chloroplast Length = 680 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 371 tagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcggtg 430 |||||| |||||| | ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 349 tagctagaaaacggtgattttggtttactagaaccatcggcatattgtttccgctcggtg 408 Query: 431 gaaacccaattcttttcctcaggatc 456 |||||| ||||||||||||||||||| Sbjct: 409 gaaaccaaattcttttcctcaggatc 434 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 595 tccataaaggagccgaatgaaagaaaaatttcatgttcggttttgaattag 645 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||| ||||||| ||||||| Sbjct: 73 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatggcatatttgaggaag 131 Query: 150 aatatacattctggcgatttgtacccaaa 178 |||||||||||| ||||||||| ||||| Sbjct: 132 aatatacattctcacgatttgtatccaaa 160 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||| |||||| |||||| ||||||||||| ||| ||||||||||||||||| || Sbjct: 253 tatgagtcaaggatacatggataaagatacaaaa--gtttatttccaatcgtaactagat 310 Query: 341 cttc 344 |||| Sbjct: 311 cttc 314 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 attcaaatagaaaagctgacatagatgtta 592 ||||| ||| |||||||||||||||||||| Sbjct: 530 attcagataaaaaagctgacatagatgtta 559 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 gtgtgattcgttctattaataact 36 ||||||||||||||||||| |||| Sbjct: 1 gtgtgattcgttctattaacaact 24
>dbj|AB206658.1| Symplocarpus nabekuraensis chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 847 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||||| |||| Sbjct: 305 gaagccaaatagctagaaaatgatgactttggtttactagagccatcggcatattctttc 364 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 |||||||| ||||| |||||||||||||||||| Sbjct: 365 agctcggtagaaacaaaattcttttcctcaggat 398 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 611 tccataaaggagccgaatgaaacaaaaatttcatgttcggttttgaattag 661 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/64 (84%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||| ||| |||||| |||| | |||| ||| ||||| ||||||||||| || Sbjct: 217 tatgagtaaagaatccatggataaagagagaaaa--gtttatttctaatcgtaactagat 274 Query: 341 cttc 344 |||| Sbjct: 275 cttc 278
>dbj|AB206657.1| Symplocarpus nipponicus chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 846 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||||| |||| Sbjct: 304 gaagccaaatagctagaaaatgatgactttggtttactagagccatcggcatattctttc 363 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 |||||||| ||||| |||||||||||||||||| Sbjct: 364 agctcggtagaaacaaaattcttttcctcaggat 397 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 610 tccataaaggagccgaatgaaacaaaaatttcatgttcggttttgaattag 660 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 313 aaaagttgatttccaatcgtaactaaatcttc 344 ||||||| ||||| ||||||||||| |||||| Sbjct: 246 aaaagtttatttctaatcgtaactagatcttc 277
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaatttgaaatgatatacttaaggc 61 |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 86209 tagtggaaaaagtgtgattcgctctattaataactgagtttgaaatgatatacttaaggt 86268 Query: 62 atccttaag 70 |||||||| Sbjct: 86269 gtccttaag 86277
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 93.7 bits (47), Expect = 7e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9852 tccataaaggagccgaatgaaaccaaaatttcatgttcggttttgaattag 9902 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaat 32 ||||||||||||||||||||||||||||||| Sbjct: 9167 tagtggtaaaagtgtgattcgttctattaat 9197 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| |||||||| |||||||||||||| ||| ||| |||||| Sbjct: 9540 gaagcaaaatagctattaaacgataactttggtttactagagacatttacatcttgtttt 9599 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||| |||||| ||| |||||||| ||||| Sbjct: 9600 agctcggcggaaacaaaatgcttttcctaaggat 9633 Score = 50.1 bits (25), Expect = 0.009 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| |||||||| | ||| ||||||| Sbjct: 9245 aaaactttatttctta-aaaggatttaatcctttacctctcaacgaaagatttgaggaag 9303 Query: 150 aatatacattctggcgatttg 170 |||||||||||| | |||||| Sbjct: 9304 aatatacattctcgtgatttg 9324 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/64 (84%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 |||||| ||| |||| |||||| |||||| |||| || ||||| |||||||||||||| Sbjct: 9456 tatgaggaaaagatccatggataaagatataaaagtgt--atttctaatcgtaactaaat 9513 Query: 341 cttc 344 |||| Sbjct: 9514 cttc 9517
>gb|AY727506.1| Hibiscus mechowii trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1767 Score = 93.7 bits (47), Expect = 7e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1682 tccataaaggagccgaatgaaaccaaaatttcatgttcggttttgaattag 1732 Score = 63.9 bits (32), Expect = 6e-07 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 1020 aaaactttatttctta-aaaggatttaatcctttccctctcaacgaaatatttgaggaag 1078 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 1079 aatatacattctcgtgatttgtatccaa 1106 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| |||||||| |||||||||||||| ||| ||| |||||| Sbjct: 1353 gaagcaaaatagctattaaacgataactttggtttactagagacatttacatcttgtttt 1412 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 |||||||||||||| ||| |||||||| ||||| Sbjct: 1413 agctcggtggaaacaaaatgcttttcctaaggat 1446 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 313 aaaagttgatttccaatcgtaactaaatcttc 344 ||||||| ||||| |||||||||||||||||| Sbjct: 1279 aaaagtttatttctaatcgtaactaaatcttc 1310
>gb|AY727505.1| Hibiscus macrophyllus trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1765 Score = 93.7 bits (47), Expect = 7e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1680 tccataaaggagccgaatgaaaccaaaatttcatgttcggttttgaattag 1730 Score = 56.0 bits (28), Expect = 2e-04 Identities = 63/72 (87%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 961 aaaactttatttctta-aaaggatttaatcctttccctctcaacgaaatatttgaggaag 1019 Query: 150 aatatacattct 161 |||||||||||| Sbjct: 1020 aatatacattct 1031 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| |||||||| |||||||||||||| ||| ||| |||||| Sbjct: 1309 gaagcaaaatagctattaaacgataactttggtttactagagacatttacatcttgtttt 1368 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||| |||||| ||| |||||||| ||||| Sbjct: 1369 agctcgggggaaacaaaatgcttttcctaaggat 1402 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 313 aaaagttgatttccaatcgtaactaaatcttct 345 ||||||| ||||| ||||||||||||||||||| Sbjct: 1230 aaaagtttatttctaatcgtaactaaatcttct 1262
>gb|AY727504.1| Hibiscus cannabinus trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1902 Score = 93.7 bits (47), Expect = 7e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1817 tccataaaggagccgaatgaaaccaaaatttcatgttcggttttgaattag 1867 Score = 63.9 bits (32), Expect = 6e-07 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 1050 aaaactttatttctta-aaaggatttaatcctttccctctcaacgaaatatttgaggaag 1108 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 1109 aatatacattctcgtgatttgtatccaa 1136 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 313 aaaagttgatttccaatcgtaactaaatcttc 344 ||||||| ||||| |||||||||||||||||| Sbjct: 1412 aaaagtttatttctaatcgtaactaaatcttc 1443
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 93.7 bits (47), Expect = 7e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9868 tccataaaggagccgaatgaaaccaaaatttcatgttcggttttgaattag 9918 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| | ||| ||||||||| ||||| |||||| || | Sbjct: 9535 gaagcaaaatagctagaaaacgacggctttagtttactagcgccatcaacatattcttcc 9594 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||||| |||||||||||||||||| Sbjct: 9595 agctcggtggaaaccaaattcttttcctcaggat 9628 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||||| ||||| | |||||| |||||| ||||||||||| || Sbjct: 9447 tatgagtaaaggatccatggataaagattc--aaaagtggatttctaatcgtaactagat 9504 Query: 341 cttc 344 |||| Sbjct: 9505 cttc 9508 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttc 25 |||||||||||||||||||||||| Sbjct: 9183 tagtggtaaaagtgtgattcgttc 9206 Score = 46.1 bits (23), Expect = 0.15 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 531 ggatcatctagaaagcagag-agctttggttccattcaaatagaaaagctgacatagatg 589 |||||||||||||||| ||| |||||| | | |||| | | ||||||||||||||||||| Sbjct: 9693 ggatcatctagaaagc-gagtagctttagatgcatttagagagaaaagctgacatagatg 9751 Query: 590 tta 592 ||| Sbjct: 9752 tta 9754 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 141 ttgaggaagaatatacattctggcgatttgta 172 ||||||||||||||| ||||| | |||||||| Sbjct: 9313 ttgaggaagaatataaattctcgtgatttgta 9344
>dbj|AB206656.1| Symplocarpus foetidus chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 847 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||||| |||| Sbjct: 305 gaagccaaatagctagaaaatgatgactttggtttactagagccatcggcatattctttc 364 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 |||||||| ||||| |||| ||||||||||||| Sbjct: 365 agctcggtagaaacaaaattattttcctcaggat 398 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 611 tccataaaggagccgaatgaaacaaaaatttcatgttcggttttgaattag 661 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||| ||| |||||| |||||| |||| ||| ||||| ||||||||||| || Sbjct: 217 tatgagtaaagaatccatggataaagatagaaaa--gtttatttctaatcgtaactagat 274 Query: 341 cttc 344 |||| Sbjct: 275 cttc 278
>dbj|AB206655.1| Lysichiton camtschatcensis chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 847 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||||| |||| Sbjct: 305 gaagccaaatagctagaaaatgatgactttggtttactagagccatcggcatattctttc 364 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 |||||||| ||||| |||| ||||||||||||| Sbjct: 365 agctcggtagaaacaaaattattttcctcaggat 398 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 611 tccataaaggagccgaatgaaacaaaaatttcatgttcggttttgaattag 661 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||| ||| |||||| |||||| |||| ||| ||||| ||||||||||| || Sbjct: 217 tatgagtaaagaatccatggataaagatagaaaa--gtttatttctaatcgtaactagat 274 Query: 341 cttc 344 |||| Sbjct: 275 cttc 278
>gb|AY796182.1| Lepidium appelianum haplotype 56 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 403 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 113 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 161
>gb|AY796181.1| Lepidium appelianum haplotype 54 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 403 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 113 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 161
>gb|AY796180.1| Lepidium propinquum haplotype 53 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796177.1| Lepidium appelianum haplotype 50 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796175.1| Lepidium appelianum haplotype 48 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796174.1| Lepidium propinquum haplotype 47 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796172.1| Lepidium appelianum haplotype 45 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 403 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 113 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 161
>gb|AY796171.1| Lepidium appelianum haplotype 44 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 401 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796165.1| Lepidium propinquum haplotype 38 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796164.1| Lepidium propinquum haplotype 37 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796162.1| Lepidium propinquum haplotype 35 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796161.1| Lepidium propinquum haplotype 34 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796144.1| Lepidium appelianum haplotype 17 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|AY796142.1| Lepidium appelianum haplotype 15 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 394 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaatcaaagtttcatgttcggttttgaattag 160
>gb|DQ352355.1| Altingia excelsa voucher E. A. Widjaja. s.n. tRNA-Gly (trnG) gene, intron; chloroplast Length = 641 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 583 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 633 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatagaaaa 247
>gb|DQ352353.1| Liquidambar orientalis voucher Aksoy 5203 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 580 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 630 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 304 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 363 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 364 agctcggtggaaagaaaattcttttcctcaggat 397 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 215 tatgagtaaaggatccatggatgaagata-gaaaagttttttttctaatcgtaactaaat 273 Query: 341 cttc 344 |||| Sbjct: 274 cttc 277
>gb|DQ352352.1| Liquidambar orientalis voucher Aksoy 5204 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 580 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 630 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 304 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 363 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 364 agctcggtggaaagaaaattcttttcctcaggat 397 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 215 tatgagtaaaggatccatggatgaagata-gaaaagttttttttctaatcgtaactaaat 273 Query: 341 cttc 344 |||| Sbjct: 274 cttc 277
>gb|DQ352351.1| Liquidambar orientalis voucher WA 138656 tRNA-Gly (trnG) gene, intron; chloroplast Length = 639 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 581 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 631 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 304 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 363 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 364 agctcggtggaaagaaaattcttttcctcaggat 397 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 215 tatgagtaaaggatccatggatgaagata-gaaaagttttttttctaatcgtaactaaat 273 Query: 341 cttc 344 |||| Sbjct: 274 cttc 277
>gb|DQ352349.1| Liquidambar formosana voucher Ickert-Bond 1291 tRNA-Gly (trnG) gene, intron; chloroplast Length = 642 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 584 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 634 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352348.1| Liquidambar macrophylla voucher Ickert-Bond 1383 tRNA-Gly (trnG) gene, intron; chloroplast Length = 639 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 581 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 631 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctcaggat 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 215 tatgagtaaaggatccatggatgaagatagaaaa 248
>gb|DQ352346.1| Liquidambar styraciflua voucher Wen 7169 tRNA-Gly (trnG) gene, intron; chloroplast Length = 639 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 581 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 631 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctcaggat 398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 215 tatgagtaaaggatccatggatgaagatagaaaagtttttttttctaatcgtaactaaat 274 Query: 341 cttc 344 |||| Sbjct: 275 cttc 278
>gb|DQ352344.1| Liquidambar acalycina voucher WA 8590 tRNA-Gly (trnG) gene, intron; chloroplast Length = 642 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 584 tccataaaggagccgaatgaaaccaaattttcatgttcggttttgaattag 634 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352343.1| Altingia sp. WP 227 tRNA-Gly (trnG) gene, intron; chloroplast Length = 642 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 584 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 634 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 214 tatgagtaaaggatccatggatgaagatagaaaagtttttttttctaatcgtaactaaat 273 Query: 341 cttc 344 |||| Sbjct: 274 cttc 277 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 304 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 363 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 364 agctcggtggaaagaaaattcttttcctca 393
>gb|DQ352342.1| Altingia siamensis voucher Ickert-Bond 1280 tRNA-Gly (trnG) gene, intron; chloroplast Length = 644 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 586 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 636 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatagaaaa 247
>gb|DQ352341.1| Altingia siamensis voucher Ickert-Bond 1281 tRNA-Gly (trnG) gene, intron; chloroplast Length = 643 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 585 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 635 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatagaaaa 247
>gb|DQ352340.1| Altingia yunnanensis voucher Ickert-Bond 1295 tRNA-Gly (trnG) gene, intron; chloroplast Length = 636 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 578 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 628 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 303 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 362 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 363 agctcggtggaaagaaaattcttttcctcaggat 396 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 214 tatgagtaaaggatccatggatgaagata-gaaaagttttttttctaatcgtaactaaat 272 Query: 341 cttc 344 |||| Sbjct: 273 cttc 276
>gb|DQ352339.1| Altingia poilanei voucher Ickert-Bond 1296 tRNA-Gly (trnG) gene, intron; chloroplast Length = 647 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 589 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 639 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 303 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 362 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 363 agctcggtggaaagaaaattcttttcctcaggat 396 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 214 tatgagtaaaggatccatggatgaagata-gaaaagttttttttctaatcgtaactaaat 272 Query: 341 cttc 344 |||| Sbjct: 273 cttc 276
>gb|DQ352338.1| Altingia obovata voucher Ickert-Bond 1356_5 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 580 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 630 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352337.1| Altingia obovata voucher Ickert-Bond 1372 tRNA-Gly (trnG) gene, intron; chloroplast Length = 649 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 591 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 641 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352336.1| Altingia gracilipes voucher Ickert-Bond 1379 tRNA-Gly (trnG) gene, intron; chloroplast Length = 647 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 589 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 639 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||||||||| |||| || |||| |||||||||||||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaagtttttttttctaatcgtaactaaat 273 Query: 341 cttc 344 |||| Sbjct: 274 cttc 277 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 304 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 363 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 364 agctcggtggaaagaaaattcttttcctca 393
>gb|DQ352335.1| Altingia gracilipes voucher Ickert-Bond 1344 tRNA-Gly (trnG) gene, intron; chloroplast Length = 645 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 587 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 637 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 307 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 366 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 367 agctcggtggaaagaaaattcttttcctca 396 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352333.1| Altingia obovata voucher Ickert-Bond 1366 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 580 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 630 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352332.1| Altingia chinensis voucher Ickert-Bond 1294 tRNA-Gly (trnG) gene, intron; chloroplast Length = 641 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 583 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 633 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352331.1| Altingia chinensis voucher Ickert-Bond 1261 tRNA-Gly (trnG) gene, intron; chloroplast Length = 650 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 592 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 642 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352330.1| Semiliquidambar cathayensis voucher Ickert-Bond 1323 tRNA-Gly (trnG) gene, intron; chloroplast Length = 652 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 644 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352329.1| Semiliquidambar cathayensis voucher Ickert-Bond 1322 tRNA-Gly (trnG) gene, intron; chloroplast Length = 651 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 593 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 643 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352327.1| Semiliquidambar caudata voucher Ickert-Bond 1367 tRNA-Gly (trnG) gene, intron; chloroplast Length = 649 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 591 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 641 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352326.1| Exbucklandia tonkinensis voucher Ickert-Bond 1269 tRNA-Gly (trnG) gene, intron; chloroplast Length = 650 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 592 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 642 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgacatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| ||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaatgcttttcctcaggat 399 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 562 cattcaaatagaaaagctgacatagat 588 |||||||| |||||||||||||||||| Sbjct: 495 cattcaaacagaaaagctgacatagat 521 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||| ||| ||||||||||||| |||| Sbjct: 213 tatgagtaaagtatccatggatgaagatagaaaa 246
>gb|BT013143.1| Lycopersicon esculentum clone 134137F, mRNA sequence Length = 5922 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 2084 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 2034 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 2369 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 2310 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 2309 agctcggtggaaacaaaatccttttcctcaggatc 2275 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||| Sbjct: 2456 tatgaataaaggatccatggatgaagatagaaa---gtttatttctaatcgtaactaaat 2400 Query: 341 cttc 344 |||| Sbjct: 2399 cttc 2396 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 2703 tagtggtaaaagtgtgattcgttctatta 2675 Score = 48.1 bits (24), Expect = 0.037 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 2626 aaaactttatttctta-aaaggatttcatccttttcctctcaat 2584
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 30344 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 30294 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 30977 tagtggtaaaagtgtgattcgttctattaa 30948 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 30683 atttctaatcgtaactaaatcttc 30660 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 30424 aaaagctgacatagatgtta 30405
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 10131 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 10181 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9849 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9908 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| || ||||||||||||||| Sbjct: 9909 agctcggtggaaacaaaacccttttcctcaggatc 9943 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 9762 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 9818 Query: 341 cttc 344 |||| Sbjct: 9819 cttc 9822 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9515 tagtggtaaaagtgtgattcgttctatta 9543 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 108 aaaggattaaatccttttcctctcaat 134 |||||||| |||||||||||||||||| Sbjct: 9608 aaaggatttaatccttttcctctcaat 9634 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 10048 aaaagctgacatagatgtta 10067
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 30441 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 30391 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 80 atattccgatgaaaactttagttcttataaaggattaaatccttttcctctcaat 134 |||||||||| ||||||||| ||| | |||||||||||||||||| ||| ||||| Sbjct: 31015 atattccgataaaaactttatttcatttaaaggattaaatcctttacctttcaat 30961 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 31081 tagtggtaaaagtgtgattcgttctat 31055 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 30538 aaaagctgacatagatgtta 30519
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 24281 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 24231 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 24914 tagtggtaaaagtgtgattcgttctattaa 24885 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 24620 atttctaatcgtaactaaatcttc 24597 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 24361 aaaagctgacatagatgtta 24342
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11170 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 11220 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| ||||||||| |||||||||||||| ||| ||||||| Sbjct: 10920 tttggtttactagagacatcgaaatattgttttagctcggtggaaacaaaatgcttttcc 10979 Query: 449 tcaggat 455 ||||||| Sbjct: 10980 tcaggat 10986 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 283 tgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatct 342 ||||||||||||| |||||||||||| | |||||| ||||| |||||||||||||||| Sbjct: 10797 tgagtaaaggatccatggatgaagat--agaaaagtgtatttctaatcgtaactaaatct 10854 Query: 343 tc 344 || Sbjct: 10855 tc 10856 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 10548 tagtggtaaaagtgtgattcgttctattaa 10577 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 agaaaagctgacatagatgtta 592 |||||||||||||||||||||| Sbjct: 11091 agaaaagctgacatagatgtta 11112
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11318 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 11368 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaa 39 ||||||||||||||||||||||||||||| ||||||| Sbjct: 10648 tagtggtaaaagtgtgattcgttctattaccaactgaa 10685 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 |||||||||| |||| |||||||||||||| |||||| ||||| ||||||||||| || Sbjct: 10871 tatgagtaaaagatccatggatgaagatac--aaaagtgtatttctaatcgtaactagat 10928 Query: 341 cttc 344 |||| Sbjct: 10929 cttc 10932 Score = 54.0 bits (27), Expect = 6e-04 Identities = 56/63 (88%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 531 ggatcatctagaaagcagag-agctttggttccattcaaatagaaaagctgacatagatg 589 |||||||||||||||| ||| |||||||| | |||||| | |||||||||||||||| || Sbjct: 11114 ggatcatctagaaagc-gagtagctttggatacattcagacagaaaagctgacataggtg 11172 Query: 590 tta 592 ||| Sbjct: 11173 tta 11175 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 412 atattgtttcagctcggtggaaacccaattcttttcctcaggat 455 |||||||||||||||||| |||| | ||||||||||| ||||| Sbjct: 11006 atattgtttcagctcggtagaaatcagattcttttcctaaggat 11049
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 8800 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 8850 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 8168 tagtggtaaaagtgtgattcgttctatta 8196 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/54 (87%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 292 gatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatcttct 345 |||| ||||||||||||| |||||| | |||| ||||||||||||||||||| Sbjct: 8430 gatccatggatgaagatataaaaaaa--ggtttctaatcgtaactaaatcttct 8481 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 415 ttgtttcagctcggtggaaacccaattcttttcctcaggat 455 |||||| |||||||||||||| ||| |||||||| ||||| Sbjct: 8565 ttgttttagctcggtggaaacaaaatacttttccttaggat 8605 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 8715 aaaagctgacatagatgtta 8734
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9907 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9957 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9627 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9686 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 9687 agctcggtggaaacaaaatccttttcctcaggatc 9721 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 9540 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 9596 Query: 341 cttc 344 |||| Sbjct: 9597 cttc 9600 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9293 tagtggtaaaagtgtgattcgttctatta 9321 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| |||||||||||||||||| Sbjct: 9370 aaaactttatttctta-aaaggatttaatccttttcctctcaat 9412 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 9826 aaaagctgacatagatgtta 9845
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9813 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9863 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9531 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9590 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| || ||||||||||||||| Sbjct: 9591 agctcggtggaaacaaaacccttttcctcaggatc 9625 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||| Sbjct: 9444 tatgaataaaggatccatggatgaagatagaaa---gtttatttctaatcgtaactaaat 9500 Query: 341 cttc 344 |||| Sbjct: 9501 cttc 9504 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9197 tagtggtaaaagtgtgattcgttctatta 9225 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| |||||||||||||||||| Sbjct: 9274 aaaactttatttctta-aaaggatttaatccttttcctctcaat 9316 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 9730 aaaagctgacatagatgtta 9749
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 17924 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 17874 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 18539 tagtggtaaaagtgtgattcgttctat 18513 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 524 tctataaggatcatctagaaagca 547 |||| ||||||||||||||||||| Sbjct: 18053 tctagaaggatcatctagaaagca 18030 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 18000 aaaagctgacatagatgtta 17981
>emb|AJ577577.1|OEU577577 Olea europaea subsp. cuspidata chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2967 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 2618 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 2668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 2353 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgacatattgtttt 2412 Query: 422 agctcggtggaaacccaattcttttcct 449 |||||||||||||| ||| |||||||| Sbjct: 2413 agctcggtggaaacaaaatccttttcct 2440 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||| |||||||| ||| || |||||| |||||||||||||| Sbjct: 2265 tatgagtaaaggatccatggctgaagatagaaa---gtagatttctaatcgtaactaaat 2321 Query: 341 cttc 344 |||| Sbjct: 2322 cttc 2325 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 2017 tagtggtaaaagtgtgattcgttctatta 2045
>emb|AJ577576.1|OEU577576 Olea europaea subsp. cuspidata chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2967 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 2619 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 2669 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 2354 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgacatattgtttt 2413 Query: 422 agctcggtggaaacccaattcttttcct 449 |||||||||||||| ||| |||||||| Sbjct: 2414 agctcggtggaaacaaaatccttttcct 2441 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||| |||||||| ||| || |||||| |||||||||||||| Sbjct: 2266 tatgagtaaaggatccatggctgaagatagaaa---gtagatttctaatcgtaactaaat 2322 Query: 341 cttc 344 |||| Sbjct: 2323 cttc 2326 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 2018 tagtggtaaaagtgtgattcgttctatta 2046
>emb|AJ577575.1|OEU577575 Olea europaea subsp. laperrinei chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2959 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 2611 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 2661 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||||||||||| | ||||| |||||| |||||||||||||| Sbjct: 2258 tatgagtaaaggatccatggatgaagat---agaaagtagatttctaatcgtaactaaat 2314 Query: 341 cttc 344 |||| Sbjct: 2315 cttc 2318 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 2346 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgacatattgtttt 2405 Query: 422 agctcggtggaaacccaattcttttcct 449 |||||||||||||| ||| |||||||| Sbjct: 2406 agctcggtggaaacaaaatccttttcct 2433 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 2009 tagtggtaaaagtgtgattcgttctatta 2037
>gb|AY727221.1| Trilisa paniculata tRNA-Gly (trnG), intron; chloroplast Length = 709 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 624 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 674 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 548 aaaagctgacatagatgtta 567
>gb|AY727220.1| Carphephorus corymbosus tRNA-Gly (trnG), intron; chloroplast Length = 709 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 624 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 674 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 548 aaaagctgacatagatgtta 567
>gb|AY727219.1| Eupatorium hyssopifolium tRNA-Gly (trnG), intron; chloroplast Length = 717 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 632 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 682 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Plus Query: 393 gtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcctcag 452 |||||||||| |||| |||||| ||| ||||||||||||| | ||| |||||||| || Sbjct: 368 gtttactagagacatcgacatattattttagctcggtggaaatcaaatccttttccttag 427 Query: 453 ga 454 || Sbjct: 428 ga 429 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 541 aaaagctgacatagatgtta 560 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 282 atttctaatcgtaactaaatcttc 305
>gb|AY727218.1| Eupatorium capillifolium tRNA-Gly (trnG) gene, intron; chloroplast Length = 725 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 640 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 690 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 541 aaaagctgacatagatgtta 560 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 282 atttctaatcgtaactaaatcttc 305
>gb|AY727518.1| Liriodendron tulipifera trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1484 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1399 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1449 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaa 39 |||||||||||||||||||||||||||||| ||||||| Sbjct: 699 tagtggtaaaagtgtgattcgttctattaacaactgaa 736 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 531 ggatcatctagaaagcagagagctttggttccattcaaatagaaaagctgacatagatgt 590 ||||||||||||||||| | | ||||| | |||||| | |||||||||||||||||||| Sbjct: 1214 ggatcatctagaaagcaaatcgttttggatgcattcagacagaaaagctgacatagatgt 1273 Query: 591 ta 592 || Sbjct: 1274 ta 1275 Score = 60.0 bits (30), Expect = 1e-05 Identities = 77/90 (85%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatattg-aggaag 149 ||||||||| |||||| ||||| || |||||||| || |||||| |||||| |||||| Sbjct: 777 aaaactttatttctta-aaagggtttaatcctttacccctcaatgctatattggaggaag 835 Query: 150 aatatacattctggcgatttgtacccaaaa 179 |||||||||||| | |||||||| |||||| Sbjct: 836 aatatacattctcgtgatttgtatccaaaa 865 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/134 (82%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatc----cg-catatt 416 ||||||||||||||| ||||||| ||| |||||||||| ||||| || |||||| Sbjct: 1050 gaagccaaatagctattaaacgatgactttagtttactagagccatcgcatcgacatatt 1109 Query: 417 gtttcagctcggtggaaacccaattcttttcctcagga-tctcttgaatgaaattaggga 475 ||||||||||||||||| |||||||||||||| || |||| ||| | || |||||| Sbjct: 1110 ttttcagctcggtggaaagaaaattcttttcctcaagattctcgtgagtagaaataggga 1169 Query: 476 acgaagtaagtaga 489 ||||||||| |||| Sbjct: 1170 acgaagtaactaga 1183 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 285 agtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||| |||||||||||| | |||||| ||||| ||||||||||| |||||| Sbjct: 966 agtaaaggatccatggatgaagatcc--aaaagtgtatttctaatcgtaactagatcttc 1023
>gb|AY727517.1| Magnolia tripetala trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1463 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1378 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1428 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaa 39 |||||||||||||||||||||||||||||| ||||||| Sbjct: 682 tagtggtaaaagtgtgattcgttctattaacaactgaa 719 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 285 agtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||| ||||||||||||||||||| || ||||| ||||||||||| |||||| Sbjct: 947 agtaaaggatccatggatgaagatacaaaaatgt--atttctaatcgtaactagatcttc 1004 Score = 61.9 bits (31), Expect = 2e-06 Identities = 72/83 (86%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| || |||||||| || |||||| |||||| ||||||| Sbjct: 760 aaaactttatttctta-aaagggtttaatcctttacccctcaatgccatattcgaggaag 818 Query: 150 aatatacattctggcgatttgta 172 |||||||||||| | |||||||| Sbjct: 819 aatatacattctcgtgatttgta 841 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 411 catattgtttcagctcggtggaaacccaattcttttcctcaggat 455 |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1087 catattttttcagctcggtggaaagaaaattcttttcctcaggat 1131 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 1228 cattcagacagaaaagctgacatagatgtta 1258
>gb|AY727516.1| Magnolia acuminata trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1460 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1375 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1425 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataactgaa 39 |||||||||||||||||||||||||||||| ||||||| Sbjct: 683 tagtggtaaaagtgtgattcgttctattaacaactgaa 720 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 285 agtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||| ||||||||||||||||||| || ||||| ||||||||||| |||||| Sbjct: 945 agtaaaggatccatggatgaagatacaaaaatgt--atttctaatcgtaactagatcttc 1002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 72/83 (86%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| || |||||||| || |||||| |||||| ||||||| Sbjct: 761 aaaactttatttctta-aaagggtttaatcctttacccctcaatgccatattcgaggaag 819 Query: 150 aatatacattctggcgatttgta 172 |||||||||||| | |||||||| Sbjct: 820 aatatacattctcgtgatttgta 842 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 411 catattgtttcagctcggtggaaacccaattcttttcctcaggat 455 |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1083 catattttttcagctcggtggaaagaaaattcttttcctcaggat 1127
>gb|AY727512.1| Gratiola virginiana trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1520 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1435 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1485 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 800 tagtggtaaaagtgtgattcgttctattaa 829 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||| | |||| | |||||||| Sbjct: 1148 gaagcaaaatagctattaaacgatgactttggtttactaaagacatcgccttattgtttt 1207 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||| ||||||||| ||| |||||||| |||||| Sbjct: 1208 agcttggtggaaacaaaatacttttccttaggatc 1242 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 1092 atttctaatcgtaactaaatcttc 1115
>gb|AY727511.1| Gratiola neglecta trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1537 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1451 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1501 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||| | |||| | |||||||| Sbjct: 1160 gaagcaaaatagctattaaacgatgtctttggtttactaaagacatcgccttattgtttt 1219 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||| ||||||||| |||| |||||||| |||||| Sbjct: 1220 agcttggtggaaacacaatccttttccttaggatc 1254 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 aaaagtgtgattcgttctattaa 31 ||||||||||||||||||||||| Sbjct: 818 aaaagtgtgattcgttctattaa 840 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 1103 atttctaatcgtaactaaatcttc 1126
>gb|AY727510.1| Gratiola brevifolia trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1500 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1414 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1464 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 770 tagtggtaaaagtgtgattcgttctattaa 799 Score = 44.1 bits (22), Expect = 0.57 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttt 124 ||||||||| |||||| ||||||||||||||||| Sbjct: 848 aaaactttatttctta-aaaggattaaatccttt 880 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 1063 atttctaatcgtaactaaatcttc 1086
>gb|AY727509.1| Solanum physalifolium trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1383 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1298 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1348 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 1010 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 1069 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 1070 agctcggtggaaacaaaatccttttcctcaggatc 1104 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 923 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 979 Query: 341 cttc 344 |||| Sbjct: 980 cttc 983 Score = 63.9 bits (32), Expect = 6e-07 Identities = 42/44 (95%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 753 aaaactttatttctta-aaaggattaaatccttttcctctcaat 795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 676 tagtggtaaaagtgtgattcgttctatta 704 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 1216 aaaagctgacatagatgtta 1235
>gb|AY727508.1| Solanum americanum trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1384 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1299 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1349 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 1010 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 1069 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 1070 agctcggtggaaacaaaatccttttcctcaggatc 1104 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 923 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 979 Query: 341 cttc 344 |||| Sbjct: 980 cttc 983 Score = 63.9 bits (32), Expect = 6e-07 Identities = 42/44 (95%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 753 aaaactttatttctta-aaaggattaaatccttttcctctcaat 795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 676 tagtggtaaaagtgtgattcgttctatta 704 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 1216 aaaagctgacatagatgtta 1235
>gb|AY727507.1| Solanum ptychanthum trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1384 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1299 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 1349 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 1010 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 1069 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 1070 agctcggtggaaacaaaatccttttcctcaggatc 1104 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 923 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 979 Query: 341 cttc 344 |||| Sbjct: 980 cttc 983 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 676 tagtggtaaaagtgtgattcgttctatta 704 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| |||||||||||||||||| Sbjct: 753 aaaactttatttctta-aaaggatttaatccttttcctctcaat 795 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 1216 aaaagctgacatagatgtta 1235
>emb|AJ577578.2|OEU577578 Olea europaea subsp. europaea chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2963 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 2615 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 2665 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||||||||||| | ||||| |||||| |||||||||||||| Sbjct: 2262 tatgagtaaaggatccatggatgaagat---agaaagtagatttctaatcgtaactaaat 2318 Query: 341 cttc 344 |||| Sbjct: 2319 cttc 2322 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 2350 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgacatattgtttt 2409 Query: 422 agctcggtggaaacccaattcttttcct 449 |||||||||||||| ||| |||||||| Sbjct: 2410 agctcggtggaaacaaaatccttttcct 2437 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 2013 tagtggtaaaagtgtgattcgttctatta 2041
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 10396 tccataaaggagccgaatgaaaccaaaatctcatgttcggttttgaattag 10446 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaataact 36 |||||||||||||||||||||||||||||| |||| Sbjct: 9785 tagtggtaaaagtgtgattcgttctattaacaact 9819 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 368 aaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttcagctcg 427 |||||||| |||| ||| ||||||||||||||||||| || | | || ||| |||||| Sbjct: 10136 aaatagctctaaaatgatggttttggtttactagaaccctcgactttttatttgagctcg 10195 Query: 428 gtggaaacccaattcttttcctcaggatc 456 || ||||| |||| ||||||| |||||| Sbjct: 10196 gtagaaacaaaattattttccttaggatc 10224 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 10338 aaaagctgacatagatgtta 10357
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 10876 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 10926 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| ||||||| ||||| |||| || |||||| |||||||||||||| Sbjct: 10503 tatgagtaaaggatccatggatggagatagaaaa--gtagatttctaatcgtaactaaat 10560 Query: 341 cttc 344 |||| Sbjct: 10561 cttc 10564 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgtt 24 ||||||||||||||||||||||| Sbjct: 10255 tagtggtaaaagtgtgattcgtt 10277 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 10800 aaaagctgacatagatgtta 10819
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9715 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9765 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9430 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9489 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 9490 agctcggtggaaacaaaatccttttcctcaggatc 9524 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||| Sbjct: 9343 tatgaataaaggatccatggatgaagatagaaa---gtttatttctaatcgtaactaaat 9399 Query: 341 cttc 344 |||| Sbjct: 9400 cttc 9403 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9096 tagtggtaaaagtgtgattcgttctatta 9124 Score = 48.1 bits (24), Expect = 0.037 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 9173 aaaactttatttctta-aaaggatttcatccttttcctctcaat 9215
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9712 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9762 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9427 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9486 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 9487 agctcggtggaaacaaaatccttttcctcaggatc 9521 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||| Sbjct: 9340 tatgaataaaggatccatggatgaagatagaaa---gtttatttctaatcgtaactaaat 9396 Query: 341 cttc 344 |||| Sbjct: 9397 cttc 9400 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9093 tagtggtaaaagtgtgattcgttctatta 9121 Score = 48.1 bits (24), Expect = 0.037 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 9170 aaaactttatttctta-aaaggatttcatccttttcctctcaat 9212
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9723 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9773 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9442 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9501 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 9502 agctcggtggaaacaaaatccttttcctcaggatc 9536 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||| Sbjct: 9355 tatgaataaaggatccatggatgaagatagaaa---gtttatttctaatcgtaactaaat 9411 Query: 341 cttc 344 |||| Sbjct: 9412 cttc 9415 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9108 tagtggtaaaagtgtgattcgttctatta 9136 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| |||||||||||||||||| Sbjct: 9185 aaaactttatttctta-aaaggatttaatccttttcctctcaat 9227 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 9641 aaaagctgacatagatgtta 9660
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 10129 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 10179 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9847 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9906 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| || ||||||||||||||| Sbjct: 9907 agctcggtggaaacaaaacccttttcctcaggatc 9941 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 9760 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 9816 Query: 341 cttc 344 |||| Sbjct: 9817 cttc 9820 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9513 tagtggtaaaagtgtgattcgttctatta 9541 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 108 aaaggattaaatccttttcctctcaat 134 |||||||| |||||||||||||||||| Sbjct: 9606 aaaggatttaatccttttcctctcaat 9632 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 10046 aaaagctgacatagatgtta 10065
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 30344 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 30294 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 30977 tagtggtaaaagtgtgattcgttctattaa 30948 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 30683 atttctaatcgtaactaaatcttc 30660 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 30424 aaaagctgacatagatgtta 30405
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 10067 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 10117 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9787 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9846 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| ||| ||||||||||||||| Sbjct: 9847 agctcggtggaaacaaaatccttttcctcaggatc 9881 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 9700 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 9756 Query: 341 cttc 344 |||| Sbjct: 9757 cttc 9760 Score = 63.9 bits (32), Expect = 6e-07 Identities = 42/44 (95%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 9530 aaaactttatttctta-aaaggattaaatccttttcctctcaat 9572 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9453 tagtggtaaaagtgtgattcgttctatta 9481 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 9986 aaaagctgacatagatgtta 10005
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 10491 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 10541 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||||| |||||||||||||||||||||| Sbjct: 10391 cattcaaacagaaaagctgacatagatgtta 10421 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaat 32 ||||||||||||||||||||||| ||||||| Sbjct: 9824 tagtggtaaaagtgtgattcgttttattaat 9854 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/60 (85%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 285 agtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||| |||||| || ||| |||| || ||||| |||||||||||||||||| Sbjct: 10084 agtaaaggatccatggataaatatagaaaagcgt--atttctaatcgtaactaaatcttc 10141
>gb|K02396.1|TOBCPTGG Tobacco chloroplast Gly-tRNA and Arg-tRNA genes and the 3' end of the proton-translocating ATPase alpha-subunit Length = 1553 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 917 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 967 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 636 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 695 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| || ||||||||||||||| Sbjct: 696 agctcggtggaaacaaaacccttttcctcaggatc 730 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 549 tatgaataaaggatccatggatgaagatagaaa---gttgatttctaatcgtaactaaat 605 Query: 341 cttc 344 |||| Sbjct: 606 cttc 609 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 302 tagtggtaaaagtgtgattcgttctatta 330 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 108 aaaggattaaatccttttcctctcaat 134 |||||||| |||||||||||||||||| Sbjct: 395 aaaggatttaatccttttcctctcaat 421 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 834 aaaagctgacatagatgtta 853
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaatta 655 |||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 9814 tccataaaggagccgaatgaaaccaaagtttcatgttcggttttgaatta 9863 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 9532 gaagcaaaatagctattaaacgatgactttggtttactagagacatcaacatattgtttt 9591 Query: 422 agctcggtggaaacccaattcttttcctcaggatc 456 |||||||||||||| || ||||||||||||||| Sbjct: 9592 agctcggtggaaacaaaacccttttcctcaggatc 9626 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||| Sbjct: 9445 tatgaataaaggatccatggatgaagatagaaa---gtttatttctaatcgtaactaaat 9501 Query: 341 cttc 344 |||| Sbjct: 9502 cttc 9505 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 9198 tagtggtaaaagtgtgattcgttctatta 9226 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaat 134 ||||||||| |||||| |||||||| |||||||||||||||||| Sbjct: 9275 aaaactttatttctta-aaaggatttaatccttttcctctcaat 9317 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 9731 aaaagctgacatagatgtta 9750
>gb|AY796183.1| Lepidium draba haplotype 57 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796179.1| Lepidium draba haplotype 52 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796178.1| Lepidium draba haplotype 51 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796176.1| Lepidium draba haplotype 49 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796173.1| Lepidium draba haplotype 46 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796170.1| Lepidium draba haplotype 43 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 396 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796169.1| Lepidium draba haplotype 42 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796168.1| Lepidium draba haplotype 41 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796167.1| Lepidium draba haplotype 40 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796166.1| Lepidium draba haplotype 39 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796163.1| Lepidium draba haplotype 36 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796160.1| Lepidium draba haplotype 33 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796159.1| Lepidium draba haplotype 32 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796158.1| Lepidium draba haplotype 31 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796157.1| Lepidium draba haplotype 30 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 386 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796156.1| Lepidium draba haplotype 29 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796155.1| Lepidium draba haplotype 28 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796154.1| Lepidium draba haplotype 27 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796153.1| Lepidium draba haplotype 26 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796152.1| Lepidium draba haplotype 25 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796151.1| Lepidium draba haplotype 24 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796150.1| Lepidium draba haplotype 23 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796149.1| Lepidium draba haplotype 22 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796148.1| Lepidium draba haplotype 21 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796147.1| Lepidium draba haplotype 20 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796146.1| Lepidium draba haplotype 19 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796145.1| Lepidium draba haplotype 18 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796143.1| Lepidium draba haplotype 16 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796141.1| Lepidium draba haplotype 14 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796140.1| Lepidium draba haplotype 12 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796139.1| Lepidium draba haplotype 11 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796138.1| Lepidium draba haplotype 10 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796137.1| Lepidium draba haplotype 9 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796136.1| Lepidium draba haplotype 8 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796135.1| Lepidium draba haplotype 7 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796134.1| Lepidium draba haplotype 6 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796133.1| Lepidium draba haplotype 5 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796132.1| Lepidium draba haplotype 4 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796131.1| Lepidium draba haplotype 3 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796130.1| Lepidium draba haplotype 2 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|AY796129.1| Lepidium draba haplotype 1 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112 cataaaggagccgaatgaaattaaagtttcatgttcggttttgaattag 160
>gb|U48233.1|OHU48233 Oenothera elata subsp. hookeri chloroplast spacer between (trnG) and (trnH) genes Length = 540 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 133 cataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 181 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 attcaaatagaaaagctgacatagat 588 ||||||| |||||||||||||||||| Sbjct: 27 attcaaagagaaaagctgacatagat 52
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 12412 cataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 12460 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||| ||||| ||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 11979 tatgagtaagggatccatggatgaagatacaaaaa--tctatttctaatcgtaactaaat 12036 Query: 341 cttc 344 |||| Sbjct: 12037 cttc 12040 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttct 26 ||||||||||||||||||||||||| Sbjct: 11706 tagtggtaaaagtgtgattcgttct 11730 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 12253 cattcatacagaaaagctgacatagatgtta 12283
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 56866 cataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 56818 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 |||||||||| |||| |||||| |||||| ||| || |||||| |||||||||||||| Sbjct: 57339 tatgagtaaaagatccatggataaagatagaaag--gtggatttctaatcgtaactaaat 57282 Query: 341 cttc 344 |||| Sbjct: 57281 cttc 57278 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgtt 24 ||||||||||||||||||||||| Sbjct: 57589 tagtggtaaaagtgtgattcgtt 57567 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 563 attcaaatagaaaagctgacatagat 588 ||||||| |||||||||||||||||| Sbjct: 56972 attcaaagagaaaagctgacatagat 56947
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9038 cataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9086 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 412 atattgtttcagctcggtggaaacccaattcttttcctcaggat 455 ||||||||| |||||||||||||| ||| |||||||| ||||| Sbjct: 8799 atattgttttagctcggtggaaacaaaatacttttcctaaggat 8842 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttc 25 |||||||||||||||||||||||| Sbjct: 8403 tagtggtaaaagtgtgattcgttc 8426 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 313 aaaagttgatttccaatcgtaactaaatcttc 344 ||||||| |||| |||||||||||||||||| Sbjct: 8680 aaaagtttctttctaatcgtaactaaatcttc 8711
>dbj|AB111731.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 43 Length = 242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111724.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 42 Length = 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111717.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 33 Length = 242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111710.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 1 Length = 242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111703.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 2 Length = 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111696.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 46 Length = 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111689.1| Alpinia japonica chloroplast trnG gene, intron 2, partial sequence, isolate: 12 Length = 242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AB111680.1| Alpinia japonica chloroplast trnG gene, intron 1, partial sequence, isolate: 5 Length = 242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 79/89 (88%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct: 39 aaaactttatttcttaaaaaggtttaa-tcctttacctctcaatagcatatttgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaa 178 || ||||||||| ||||||||| ||||| Sbjct: 98 aacatacattctcacgatttgtatccaaa 126
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 9291 cataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 9339 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttc 25 |||||||||||||||||||||||| Sbjct: 8658 tagtggtaaaagtgtgattcgttc 8681 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 524 tctataaggatcatctagaaagca 547 |||| ||||||||||||||||||| Sbjct: 9161 tctagaaggatcatctagaaagca 9184
>emb|X54725.1|CHSATRNG Sinapis alba chloroplast trnG gene for transfer RNA-Gly Length = 996 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 771 cataaaggagccgaatgaaaccaaagtttcatgttcggttttgaattag 819 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttc 25 |||||||||||||||||||||||| Sbjct: 136 tagtggtaaaagtgtgattcgttc 159 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 412 atattgtttcagctcggtggaaacccaattcttttcctcaggat 455 ||||||||| ||||||||||||| ||| |||||||| ||||| Sbjct: 532 atattgttttagctcggtggaaaaaaaatacttttcctaaggat 575 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 313 aaaagttgatttccaatcgtaactaaatcttc 344 ||||||| |||| |||||||||||||||||| Sbjct: 413 aaaagtttctttctaatcgtaactaaatcttc 444
>gb|DQ352354.1| Altingia excelsa voucher J. F. Maxwell s.n. tRNA-Gly (trnG) gene, intron; chloroplast Length = 645 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 587 tccataaaggagccgaatgaaaccaatgtttcatgttcggttttgaattag 637 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 307 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 366 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 367 agctcggtggaaagaaaattcttttcctca 396 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagata 309 ||||||||||||||| ||||||||||||| Sbjct: 214 tatgagtaaaggatccatggatgaagata 242
>gb|DQ352350.1| Liquidambar formosana voucher Ickert-Bond 1363 tRNA-Gly (trnG) gene, intron; chloroplast Length = 649 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 591 tccataaaggagccgaatgaaaccgaagtttcatgttcggttttgaattag 641 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctca 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>gb|DQ352345.1| Liquidambar acalycina voucher Wen 8146_11 tRNA-Gly (trnG) gene, intron; chloroplast Length = 649 Score = 77.8 bits (39), Expect = 4e-11 Identities = 49/51 (96%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 592 tccataaaggagccgaatgaaaccaaa-tttcatgttcggttttgaattag 641 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||||||||| |||||||||||||| Sbjct: 365 agctcggtggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 10103 tccataaaggagccgaatgaaaccaaagtttcacgttcggttttgaattag 10153 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaat 32 |||||||||||||| |||||||||||||||| Sbjct: 9499 tagtggtaaaagtgcgattcgttctattaat 9529
>gb|AY727222.1| Eupatorium rotundifolium tRNA-Gly (trnG), intron; chloroplast Length = 727 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||||| ||||||||||||||| Sbjct: 643 tccataaaggagccgaatgaaaccaaagtttcatgctcggttttgaattag 693 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 542 aaaagctgacatagatgtta 561 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 283 atttctaatcgtaactaaatcttc 306
>gb|AY727515.1| Minuartia glabra trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1297 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1212 tccataaaggagccgaatgaaactaaagtttcatgttcggttttgaattag 1262 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 589 tagtggtaaaagtgtgattcgttctatta 617
>gb|AY727514.1| Minuartia cumberlandensis trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1284 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1199 tccataaaggagccgaatgaaactaaagtttcatgttcggttttgaattag 1249 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatta 30 ||||||||||||||||||||||||||||| Sbjct: 576 tagtggtaaaagtgtgattcgttctatta 604
>gb|AY727513.1| Minuartia uniflora trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1353 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1268 tccataaaggagccgaatgaaactaaagtttcatgttcggttttgaattag 1318 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctatt 29 |||||||||||||||||||||||||||| Sbjct: 625 tagtggtaaaagtgtgattcgttctatt 652
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 10093 tccataaaggagccgaatgaaaccaaagtttcacgttcggttttgaattag 10143 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaat 32 |||||||||||||| |||||||||||||||| Sbjct: 9486 tagtggtaaaagtgcgattcgttctattaat 9516
>emb|AM085576.1| Carex bigelowii chloroplast trnS-trnG intergenic spacer, isolate 24 Length = 653 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 593 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 643 Score = 58.0 bits (29), Expect = 4e-05 Identities = 99/119 (83%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagatacaa--aaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| ||||||||||||||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgtaaaagctgatttccaatcgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 375 ttcagctcggtagaaactcaattcttttcct 405
>emb|AM085575.1| Carex bigelowii chloroplast trnS-trnG intergenic spacer, isolate 22 Length = 653 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 593 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 643 Score = 58.0 bits (29), Expect = 4e-05 Identities = 99/119 (83%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagatacaa--aaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| ||||||||||||||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgtaaaagctgatttccaatcgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 375 ttcagctcggtagaaactcaattcttttcct 405
>emb|AM085574.1| Carex bigelowii chloroplast trnS-trnG intergenic spacer, isolate 14 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 58.0 bits (29), Expect = 4e-05 Identities = 99/119 (83%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagatacaa--aaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| ||||||||||||||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaatcgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085573.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA23 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085572.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA22 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085571.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA21 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085570.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA20 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085569.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA19 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085568.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA18 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085567.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA14 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085566.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA11 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085565.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA10 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085564.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA9 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085563.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA8 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085562.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA7 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085561.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA6 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085560.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA5 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085559.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA4 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085558.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA3 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085557.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA2 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>emb|AM085556.1| Carex atrofusca chloroplast trnS-trnG intergenic spacer, isolate CA1 Length = 654 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 594 tccataaaggagccgaatgaaaaaaaaatctcatgttcggttttgaattag 644 Score = 50.1 bits (25), Expect = 0.009 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 231 agtcgcgaagcataattttgcattggatttaagtat-tccaattttgaaaa--tatgagt 287 ||||| |||||||||||| | |||||||| || ||| |||| ||| |||| ||| ||| Sbjct: 170 agtcgtgaagcataatttggaattggattgaactatatccagtttataaaaagtataagt 229 Query: 288 aaaggatctatggatgaagataca--aaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||||||| |||| | | ||||| |||||||||| |||||||| |||||| Sbjct: 230 aaaggatctatggataaagaaagatgcaaaagctgatttccaaccgtaactagatcttc 288 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 ttcagctcggtggaaacccaattcttttcct 449 ||||||||||| ||||| ||||||||||||| Sbjct: 376 ttcagctcggtagaaactcaattcttttcct 406
>dbj|AB168040.1| Alnus sieboldiana chloroplast trnG gene, partial sequence, haplotype:B Length = 1019 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 605 cataaaggagccgaatgaaaccaaagtttcacgttcggttttgaattag 653 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 524 tctataaggatcatctagaaagcagagagctttggttccattcaaatagaaaagctgaca 583 |||||| |||||||||||||||| | | |||| | |||||||| ||||||||||||| Sbjct: 464 tctatagggatcatctagaaagcgggttgttttgaatgcattcaaacagaaaagctgaca 523 Query: 584 tagatgtta 592 ||||||||| Sbjct: 524 tagatgtta 532 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| |||||||||| |||||||||||||| ||| ||||||| Sbjct: 340 tttggtttactagagacatcgacatattgttttagctcggtggaaacaaaatgcttttcc 399 Query: 449 t 449 | Sbjct: 400 t 400 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||||||||||||||| ||| ||||| | ||| ||||||| Sbjct: 39 aaaactttatttctta-aaaggattaaatcctttacctatcaatgaaagattcgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaaa 179 |||| ||||||| | ||||| || |||||| Sbjct: 98 aatagacattctcgtgatttatatccaaaa 127 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 258 atttctaatcgtaactaaatcttc 281
>dbj|AB168039.1| Alnus sieboldiana chloroplast trnG gene, partial sequence, haplotype:A Length = 1019 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 605 cataaaggagccgaatgaaaccaaagtttcacgttcggttttgaattag 653 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 524 tctataaggatcatctagaaagcagagagctttggttccattcaaatagaaaagctgaca 583 |||||| |||||||||||||||| | | |||| | |||||||| ||||||||||||| Sbjct: 464 tctatagggatcatctagaaagcgggttgttttgaatgcattcaaacagaaaagctgaca 523 Query: 584 tagatgtta 592 ||||||||| Sbjct: 524 tagatgtta 532 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| |||||||||| |||||||||||||| ||| ||||||| Sbjct: 340 tttggtttactagagacatcgacatattgttttagctcggtggaaacaaaatgcttttcc 399 Query: 449 t 449 | Sbjct: 400 t 400 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||||||||||||||| ||| ||||| | ||| ||||||| Sbjct: 39 aaaactttatttctta-aaaggattaaatcctttacctatcaatgaaagattcgaggaag 97 Query: 150 aatatacattctggcgatttgtacccaaaa 179 |||| ||||||| | ||||| || |||||| Sbjct: 98 aatagacattctcgtgatttatatccaaaa 127 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 atttccaatcgtaactaaatcttc 344 ||||| |||||||||||||||||| Sbjct: 258 atttctaatcgtaactaaatcttc 281
>gb|AY608172.1| Dumortiera hirsuta tRNA-Gly (trnG) gene, intron; chloroplast Length = 586 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 609 ataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 ||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 53 ataaaggagccgaatgaaagaaaactttcatgttcggttttgaattag 6 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgt 23 |||||||||||||||||||||| Sbjct: 586 tagtggtaaaagtgtgattcgt 565
>gb|DQ304785.1| Vitex negundo haplotype 2 tRNA-Gly (trnG) gene, intron; chloroplast Length = 603 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| ||||||||||| |||||||||||||| ||| ||||||| Sbjct: 299 tttggtttactagagacatcggcatattgttttagctcggtggaaacaaaatccttttcc 240 Query: 449 tcaggatc 456 | |||||| Sbjct: 239 ttaggatc 232 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/64 (85%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||| ||||||| | ||||| ||||| |||||||||||||| Sbjct: 415 tatgagtaaaggatccatggctgaagat---agaaagtcaatttctaatcgtaactaaat 359 Query: 341 cttc 344 |||| Sbjct: 358 cttc 355 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaa 627 |||||||||||||||||||||| Sbjct: 53 tccataaaggagccgaatgaaa 32
>gb|DQ304784.1| Vitex negundo haplotype 1 tRNA-Gly (trnG) gene, intron; chloroplast Length = 595 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| ||||||||||| |||||||||||||| ||| ||||||| Sbjct: 291 tttggtttactagagacatcggcatattgttttagctcggtggaaacaaaatccttttcc 232 Query: 449 tcaggatc 456 | |||||| Sbjct: 231 ttaggatc 224 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/64 (85%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 281 tatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaat 340 ||||||||||||||| |||| ||||||| | ||||| ||||| |||||||||||||| Sbjct: 407 tatgagtaaaggatccatggctgaagat---agaaagtcaatttctaatcgtaactaaat 351 Query: 341 cttc 344 |||| Sbjct: 350 cttc 347 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaa 627 |||||||||||||||||||||| Sbjct: 53 tccataaaggagccgaatgaaa 32
>gb|AY608168.1| Andreaea rothii tRNA-Gly (trnG) gene, intron; chloroplast Length = 715 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaa 652 |||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 56 tccataaaggagccgaatgaaaaaaaattttcatgttcggttttgaa 10
>gb|AY500742.1| Physocarpus opulifolius voucher JSh1015 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1372 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 86 tccataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 63.9 bits (32), Expect = 6e-07 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| ||||||| Sbjct: 625 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaag 567 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 566 aatatacattctcgtgatttgtatccaa 539 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 706 tagtggtaaaagtgtgattcgttctat 680 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 338 tttggtttactagagacatcgacaaattgttttagctcggtggaaacaaaatgcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 174 cattcatacagaaaagctgacatagatgtta 144 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 281 tatgagtaaaggatctatggatgaagata 309 ||||||||||||||| |||||| |||||| Sbjct: 452 tatgagtaaaggatccatggataaagata 424
>gb|AY500741.1| Prunus caroliniana voucher E.Lickey tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1361 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 86 tccataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| || ||||||| |||||||||||||| ||||||||||| Sbjct: 337 tttggtttactagagacatcgacaaattgttttagctcggtggaaacaaaattcttttcc 278 Query: 449 tcaggat 455 | ||||| Sbjct: 277 taaggat 271 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 623 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 565 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 564 aatatacattctcgtgatttgtatccaa 537 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 704 tagtggtaaaagtgtgattcgttctat 678 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 172 cattcagacagaaaagctgacatagatgtta 142
>gb|AY500740.1| Prunus laurocerasus voucher JSh1014 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1344 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 86 tccataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| || ||||||| |||||||||||||| ||||||||||| Sbjct: 339 tttggtttactagagacatcgacaaattgttttagctcggtggaaacaaaattcttttcc 280 Query: 449 tcaggat 455 | ||||| Sbjct: 279 taaggat 273 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 707 tagtggtaaaagtgtgattcgttctat 681 Score = 48.1 bits (24), Expect = 0.037 Identities = 74/88 (84%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| || ||||| |||||||| ||||||||| | ||| |||||| Sbjct: 626 aaaactttatttctta-aagggatttaatcctttacctctcaatgaaaaattcgaggaat 568 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 567 aatatacattctcgtgatttgtatccaa 540 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 174 cattcagacagaaaagctgacatagatgtta 144
>gb|AY500739.1| Prunus virginiana voucher JSh871 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1353 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 86 tccataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| || ||||||| |||||||||||||| ||||||||||| Sbjct: 338 tttggtttactagagacatcgacaaattgttttagctcggtggaaacaaaattcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 625 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 567 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 566 aatatacattctcgtgatttgtatccaa 539 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 706 tagtggtaaaagtgtgattcgttctat 680 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500738.1| Prunus serotina voucher JSh1013 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1349 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 86 tccataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| |||| || ||||||| |||||||||||||| ||||||||||| Sbjct: 338 tttggtttactagagacatcgacaaattgttttagctcggtggaaacaaaattcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 625 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 567 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 566 aatatacattctcgtgatttgtatccaa 539 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 706 tagtggtaaaagtgtgattcgttctat 680 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|DQ352328.1| Semiliquidambar cathayensis voucher Ickert-Bond 1376 tRNA-Gly (trnG) gene, intron; chloroplast Length = 648 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttt 648 |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 591 tccataaaggagccgaatgaaaccaaagtttcatgttcggttt 633 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 305 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 364 Query: 422 agctcggtggaaacccaattcttttcctca 451 ||||||| ||||| |||||||||||||| Sbjct: 365 agctcgggggaaagaaaattcttttcctca 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 214 tatgagtaaaggatccatggatgaagatataaaa 247 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 562 cattcaaatagaaaagctgacatagat 588 |||||||| |||||||||||||||||| Sbjct: 494 cattcaaacagaaaagctgacatagat 520
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 10109 tccataaaggagccgaatgaaacgaaaaattcatgttcggttttgtattag 10159 Score = 60.0 bits (30), Expect = 1e-05 Identities = 77/90 (85%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| ||||| || |||||||| ||||||||| || || ||||||| Sbjct: 9489 aaaactttatttctta-aaagggtttaatcctttacctctcaatgccacgtttgaggaag 9547 Query: 150 aatatacattctggcgatttgtacccaaaa 179 |||||||||||| | |||||||| |||||| Sbjct: 9548 aatatacattctcgtgatttgtatccaaaa 9577 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 2 tagtggtaaaagtgtgattcgttctattaa 31 |||||||||||||||||||||||||||||| Sbjct: 9411 tagtggtaaaagtgtgattcgttctattaa 9440 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||||||||||||| |||||| |||||||||| ||| || || ||||||||||| Sbjct: 9766 gaagccaaatagctattgaacgatgactttggtttaccagagccgtcgacatattgtttc 9825 Query: 422 agctcggtggaaa 434 ||||||||||||| Sbjct: 9826 agctcggtggaaa 9838 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 285 agtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaaatcttc 344 ||||||||||| ||||||||||| || |||||| ||||| ||||||||||| |||||| Sbjct: 9682 agtaaaggatccatggatgaagagac--aaaagtatatttctaatcgtaactagatcttc 9739 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aaaagctgacatagatgtta 592 |||||||||||||||||||| Sbjct: 9967 aaaagctgacatagatgtta 9986
>gb|DQ352347.1| Liquidambar macrophylla voucher Ickert-Bond 1390 tRNA-Gly (trnG) gene, intron; chloroplast Length = 608 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||| Sbjct: 306 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgatatattgtttt 365 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| |||||||||||||||||| Sbjct: 366 agctcggtggaaagaaaattcttttcctcaggat 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 tatgagtaaaggatctatggatgaagatacaaaa 314 ||||||||||||||| ||||||||||||| |||| Sbjct: 215 tatgagtaaaggatccatggatgaagatagaaaa 248 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 606 tccataaaggagccgaatgaaatcaaa 632 |||||||||||||||||||||| |||| Sbjct: 581 tccataaaggagccgaatgaaaccaaa 607
>gb|DQ352325.1| Rhodoleia championii voucher Ickert-Bond 1293 tRNA-Gly (trnG) gene, intron; chloroplast Length = 612 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 362 gaagccaaatagctaaaaaacgatagttttggtttactagaaccatccgcatattgtttc 421 ||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 307 gaagcaaaatagctattaaacgatgactttggtttactagagacatcgacatattgtttt 366 Query: 422 agctcggtggaaacccaattcttttcctcaggat 455 ||||||||||||| ||| |||||||||||||| Sbjct: 367 agctcggtggaaataaaatgcttttcctcaggat 400 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 496 cattcagacagaaaagctgacatagatgtta 526
>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence Length = 89884 Score = 67.9 bits (34), Expect = 4e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 279 aatatgagtaaaggatctatggatgaagatacaaaaaagttgatttccaatcgtaactaa 338 ||||||||||||||||||||||| | |||| | |||| ||| ||||||||||||||||| Sbjct: 56764 aatatgagtaaaggatctatggagaatgatatagaaaatttg-tttccaatcgtaactaa 56822 Query: 339 atcttc 344 |||||| Sbjct: 56823 atcttc 56828
>gb|AY608171.1| Dendrohypopterygium arbuscula tRNA-Gly (trnG) gene, intron; chloroplast Length = 563 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaa 652 ||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 54 cataaaggagccgtatgatattaaaatttcatgttcggttttgaa 10 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgtt 24 ||||||||||||||||||||||| Sbjct: 563 tagtggtaaaagtgtgattcgtt 541
>gb|AY500737.1| Prunus pensylvanica voucher JSh865 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1093 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 63.9 bits (32), Expect = 6e-07 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| |||||||||| | ||| |||||| Sbjct: 644 aaaactttatttctta-aaaggatttaatcctttacctctcaataaaaaattcgaggaat 586 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 585 aatatacattctcgtgatttgtatccaa 558 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 725 tagtggtaaaagtgtgattcgttctat 699 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 338 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500736.1| Prunus mahaleb voucher JSh966 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1094 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 63.9 bits (32), Expect = 6e-07 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| |||||||||| | ||| |||||| Sbjct: 643 aaaactttatttctta-aaaggatttaatcctttacctctcaataaaaaattcgaggaat 585 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 584 aatatacattctcgtgatttgtatccaa 557 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 724 tagtggtaaaagtgtgattcgttctat 698 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 338 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500735.1| Prunus fasciculata voucher DPRU2033 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1397 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 726 tagtggtaaaagtgtgattcgttctat 700 Score = 54.0 bits (27), Expect = 6e-04 Identities = 71/83 (85%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 645 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 587 Query: 150 aatatacattctggcgatttgta 172 |||||||||||| | |||||||| Sbjct: 586 aatatacattctcgtgatttgta 564 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 339 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 280 Query: 449 tcaggat 455 | ||||| Sbjct: 279 taaggat 273 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 174 cattcagacagaaaagctgacatagatgtta 144
>gb|AY500734.1| Prunus tenella voucher DPRU2225.6 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1414 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 646 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 588 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 587 aatatacattctcgtgatttgtatccaa 560 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 727 tagtggtaaaagtgtgattcgttctat 701 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 175 cattcagacagaaaagctgacatagatgtta 145
>gb|AY500733.1| Prunus persica voucher JSh992 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1129 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 642 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 584 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 583 aatatacattctcgtgatttgtatccaa 556 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 723 tagtggtaaaagtgtgattcgttctat 697 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 337 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 278 Query: 449 tcaggat 455 | ||||| Sbjct: 277 taaggat 271 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 172 cattcagacagaaaagctgacatagatgtta 142
>gb|AY500732.1| Prunus mira voucher DPRU2228.3 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1129 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 642 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 584 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 583 aatatacattctcgtgatttgtatccaa 556 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 723 tagtggtaaaagtgtgattcgttctat 697 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 337 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 278 Query: 449 tcaggat 455 | ||||| Sbjct: 277 taaggat 271 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 172 cattcagacagaaaagctgacatagatgtta 142
>gb|AY500731.1| Prunus davidiana voucher DPRU581 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1422 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 658 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 600 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 599 aatatacattctcgtgatttgtatccaa 572 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 739 tagtggtaaaagtgtgattcgttctat 713 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 339 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 280 Query: 449 tcaggat 455 | ||||| Sbjct: 279 taaggat 273 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 174 cattcagacagaaaagctgacatagatgtta 144
>gb|AY500730.1| Prunus dulcis voucher DPRU1463.5 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1410 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 640 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 582 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 581 aatatacattctcgtgatttgtatccaa 554 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 721 tagtggtaaaagtgtgattcgttctat 695 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 169 cattcagacagaaaagctgacatagatgtta 139 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 414 attgtttcagctcggtggaaacccaattcttttcctcaggat 455 ||||||| |||||||||||||| ||| |||||||| ||||| Sbjct: 309 attgttttagctcggtggaaacaaaatgcttttcctaaggat 268
>gb|AY500729.1| Prunus tomentosa voucher DPRU2316.4 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1446 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 644 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 586 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 585 aatatacattctcgtgatttgtatccaa 558 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 725 tagtggtaaaagtgtgattcgttctat 699 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 338 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500728.1| Prunus pumila voucher Horn 2001-02 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1420 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 645 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 587 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 586 aatatacattctcgtgatttgtatccaa 559 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 726 tagtggtaaaagtgtgattcgttctat 700 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 339 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 280 Query: 449 tcaggat 455 | ||||| Sbjct: 279 taaggat 273 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 174 cattcagacagaaaagctgacatagatgtta 144
>gb|AY500727.1| Prunus glandulosa voucher DPRU403.1 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1418 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 645 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 587 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 586 aatatacattctcgtgatttgtatccaa 559 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 726 tagtggtaaaagtgtgattcgttctat 700 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 339 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 280 Query: 449 tcaggat 455 | ||||| Sbjct: 279 taaggat 273 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 174 cattcagacagaaaagctgacatagatgtta 144
>gb|AY500726.1| Prunus mume voucher DPRU1588 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1420 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 643 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 585 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 584 aatatacattctcgtgatttgtatccaa 557 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 724 tagtggtaaaagtgtgattcgttctat 698 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 337 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 278 Query: 449 tcaggat 455 | ||||| Sbjct: 277 taaggat 271 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 172 cattcagacagaaaagctgacatagatgtta 142
>gb|AY500725.1| Prunus armeniaca voucher DPRU1372.2 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1415 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 644 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 586 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 585 aatatacattctcgtgatttgtatccaa 558 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 725 tagtggtaaaagtgtgattcgttctat 699 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 338 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500724.1| Prunus mandshurica voucher DPRU2311.1 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1418 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 646 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 588 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 587 aatatacattctcgtgatttgtatccaa 560 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 727 tagtggtaaaagtgtgattcgttctat 701 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 340 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 281 Query: 449 tcaggat 455 | ||||| Sbjct: 280 taaggat 274 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 175 cattcagacagaaaagctgacatagatgtta 145
>gb|AY500723.1| Prunus simonii voucher DPRU545 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1415 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 644 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 586 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 585 aatatacattctcgtgatttgtatccaa 558 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 725 tagtggtaaaagtgtgattcgttctat 699 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 338 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 279 Query: 449 tcaggat 455 | ||||| Sbjct: 278 taaggat 272 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500722.1| Prunus salicina voucher DPRU791 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1419 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 650 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 592 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 591 aatatacattctcgtgatttgtatccaa 564 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 731 tagtggtaaaagtgtgattcgttctat 705 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 344 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 285 Query: 449 tcaggat 455 | ||||| Sbjct: 284 taaggat 278 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 173 cattcagacagaaaagctgacatagatgtta 143
>gb|AY500721.1| Prunus cerasifera voucher DPRU563 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1442 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 608 cataaaggagccgaatgaaatcaaaatttcatgttcggttttgaattag 656 |||||||||||||||||||| |||| ||||| |||| |||||||||||| Sbjct: 84 cataaaggagccgaatgaaaccaaagtttcacgttcagttttgaattag 36 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 91 aaaactttagttcttataaaggattaaatccttttcctctcaatagcatatt-gaggaag 149 ||||||||| |||||| |||||||| |||||||| ||||||||| | ||| |||||| Sbjct: 649 aaaactttatttctta-aaaggatttaatcctttacctctcaatgaaaaattcgaggaat 591 Query: 150 aatatacattctggcgatttgtacccaa 177 |||||||||||| | |||||||| |||| Sbjct: 590 aatatacattctcgtgatttgtatccaa 563 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 tagtggtaaaagtgtgattcgttctat 28 ||||||||||||||||||||||||||| Sbjct: 730 tagtggtaaaagtgtgattcgttctat 704 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 389 tttggtttactagaaccatccgcatattgtttcagctcggtggaaacccaattcttttcc 448 |||||||||||||| ||| || ||||||| |||||||||||||| ||| ||||||| Sbjct: 343 tttggtttactagagacattgacaaattgttttagctcggtggaaacaaaatgcttttcc 284 Query: 449 tcaggat 455 | ||||| Sbjct: 283 taaggat 277 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 cattcaaatagaaaagctgacatagatgtta 592 |||||| | |||||||||||||||||||||| Sbjct: 178 cattcagacagaaaagctgacatagatgtta 148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,511,801 Number of Sequences: 3902068 Number of extensions: 8511801 Number of successful extensions: 197285 Number of sequences better than 10.0: 839 Number of HSP's better than 10.0 without gapping: 832 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 192251 Number of HSP's gapped (non-prelim): 4785 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)