ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdm18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
2dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
3ref|NM_191468.1| Oryza sativa (japonica cultivar-group), predic... 48 0.030
4emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chr... 48 0.030
5dbj|AK071643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.030
6dbj|AK059025.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.030
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.46
8gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 44 0.46
9ref|XM_966249.1| PREDICTED: Tribolium castaneum similar to CG475... 44 0.46
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
11gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosom... 42 1.8
12ref|XM_722820.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 1.8
13gb|AC171199.1| Mus musculus BAC clone RP24-469I17 from chromosom... 42 1.8
14gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 7.2
15gb|AC166359.3| Mus musculus BAC clone RP23-303I23 from chromosom... 40 7.2
16ref|XM_413957.1| PREDICTED: Gallus gallus similar to tumor prote... 40 7.2
17gb|AC167234.4| Mus musculus 10 BAC RP23-158E3 (Roswell Park Canc... 40 7.2
18gb|AC012645.7| Homo sapiens chromosome 16 clone RP11-455F5, comp... 40 7.2
19gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome... 40 7.2
20gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.2
21emb|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 o... 40 7.2
22emb|AJ879063.1| Capsicum chinense mRNA for metallotionein-like p... 40 7.2
23gb|AC114942.2| Homo sapiens chromosome 5 clone CTD-2327J4, compl... 40 7.2
24gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, comple... 40 7.2
25gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, com... 40 7.2
26gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, compl... 40 7.2
27gb|AC010414.8| Homo sapiens chromosome 5 clone CTD-2169P11, comp... 40 7.2
28gb|AC010254.6| Homo sapiens chromosome 5 clone CTC-434O11, compl... 40 7.2
29gb|AC158601.5| Mus musculus 10 BAC RP23-119L9 (Roswell Park Canc... 40 7.2
30gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome... 40 7.2
31gb|AC018897.4|AC018897 Homo sapiens BAC clone RP11-575J11 from 1... 40 7.2
32gb|AC153942.8| Mus musculus 10 BAC RP24-174M19 (Roswell Park Can... 40 7.2
33gb|AC125494.2| Homo sapiens 12 PAC RP4-761J14 (Roswell Park Canc... 40 7.2
34gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, com... 40 7.2
35emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chr... 40 7.2
36dbj|AP002984.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 7.2
37gb|AC102480.8| Mus musculus chromosome 3, clone RP24-423L4, comp... 40 7.2
38gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, comple... 40 7.2
39gb|AY829650.1| Capsicum annuum metallothionein-like protein type... 40 7.2
40emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chr... 40 7.2
41emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chro... 40 7.2
42emb|AL844558.6| Mouse DNA sequence from clone RP23-378I2 on chro... 40 7.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 391      cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 450
                |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 32843925 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 32843866

                     
Query: 451      aaggt 455
                 ||||
Sbjct: 32843865 gaggt 32843861
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>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413G02
          Length = 155633

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 391   cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 450
             |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 65330 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 65271

                  
Query: 451   aaggt 455
              ||||
Sbjct: 65270 gaggt 65266
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>ref|NM_191468.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1398

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 391 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 450
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 316 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 375
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>emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chromosome 4, complete
              sequence
          Length = 178426

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 189    gaatgagggagaagaagaatgggg 212
              ||||||||||||||||||||||||
Sbjct: 114590 gaatgagggagaagaagaatgggg 114567
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>dbj|AK071643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105J09, full
           insert sequence
          Length = 2008

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 391 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 450
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 588 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 647
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>dbj|AK059025.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B09, full
           insert sequence
          Length = 1536

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 391 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 450
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 135 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 194
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 176      agaaaccagagaggaatgaggg 197
                ||||||||||||||||||||||
Sbjct: 20560881 agaaaccagagaggaatgaggg 20560860
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>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete
             sequence
          Length = 101073

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 176   agaaaccagagaggaatgaggg 197
             ||||||||||||||||||||||
Sbjct: 74946 agaaaccagagaggaatgaggg 74925
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>ref|XM_966249.1| PREDICTED: Tribolium castaneum similar to CG4751-PA (LOC659985),
           mRNA
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 163 tggtatagaaaaaagaaaccagagaggaat 192
           ||||||||||||||||||  ||||||||||
Sbjct: 460 tggtatagaaaaaagaaagaagagaggaat 489
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 176      agaaaccagagaggaatgaggg 197
                ||||||||||||||||||||||
Sbjct: 20553910 agaaaccagagaggaatgaggg 20553889
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>gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosome 17, complete sequence
          Length = 211631

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 193    gagggagaagaagaatggggggagaagga 221
              ||||||||||||||||||| | |||||||
Sbjct: 101077 gagggagaagaagaatgggagaagaagga 101105
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>ref|XM_722820.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07120)
           partial mRNA
          Length = 741

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 394 tatacattctacaaatatacc 414
           |||||||||||||||||||||
Sbjct: 689 tatacattctacaaatatacc 709
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>gb|AC171199.1| Mus musculus BAC clone RP24-469I17 from chromosome 16, complete
             sequence
          Length = 146976

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 179   aaccagagaggaatgagggag 199
             |||||||||||||||||||||
Sbjct: 54322 aaccagagaggaatgagggag 54342
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 166     tatagaaaaaagaaaccaga 185
               ||||||||||||||||||||
Sbjct: 1324199 tatagaaaaaagaaaccaga 1324180
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>gb|AC166359.3| Mus musculus BAC clone RP23-303I23 from chromosome 10, complete sequence
          Length = 195865

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    cagagaggaatgagggagaa 201
              ||||||||||||||||||||
Sbjct: 162950 cagagaggaatgagggagaa 162969
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>ref|XM_413957.1| PREDICTED: Gallus gallus similar to tumor protein p53 binding
            protein, 1; tumor protein 53-binding protein, 1; tumor
            protein p53-binding protein, 1 (LOC415589), mRNA
          Length = 5871

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 181  ccagagaggaatgagggagaagaa 204
            ||||||| ||||||||||||||||
Sbjct: 1276 ccagagaagaatgagggagaagaa 1299
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>gb|AC167234.4| Mus musculus 10 BAC RP23-158E3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 184159

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   agaggaatgagggagaagaa 204
             ||||||||||||||||||||
Sbjct: 52870 agaggaatgagggagaagaa 52851
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>gb|AC012645.7| Homo sapiens chromosome 16 clone RP11-455F5, complete sequence
          Length = 192943

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aagtccttccaggtagatgt 106
             ||||||||||||||||||||
Sbjct: 19632 aagtccttccaggtagatgt 19613
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>gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome 3, complete
            sequence
          Length = 225416

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 190  aatgagggagaagaagaatggggg 213
            ||||||||||||||||||| ||||
Sbjct: 6751 aatgagggagaagaagaatagggg 6728
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 21      tagctcgccagagtcgggcg 40
               ||||||||||||||||||||
Sbjct: 1257755 tagctcgccagagtcgggcg 1257774
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>emb|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2
             Contains a novel pseudogene, a 60S Ribosomal protein L30
             (RPL30) pseudogene, H4 histone family member F pseudogene
             H4FFP and histone genes H2BFC, H2AFC, H3FK. Contains ESTs,
             STSs, GSSs and two CpG islands, complete sequence
          Length = 139904

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   gagggagaagaagaatggggggag 216
             ||||||||||||||||| ||||||
Sbjct: 39518 gagggagaagaagaatgaggggag 39541
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>emb|AJ879063.1| Capsicum chinense mRNA for metallotionein-like protein
          Length = 614

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 478 tgcttatgtttgtatgaagg 497
           ||||||||||||||||||||
Sbjct: 478 tgcttatgtttgtatgaagg 497
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>gb|AC114942.2| Homo sapiens chromosome 5 clone CTD-2327J4, complete sequence
          Length = 118067

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 198  agaagaagaatggggggagaagga 221
            |||||||||||||| |||||||||
Sbjct: 2291 agaagaagaatgggtggagaagga 2314
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>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence
          Length = 183972

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    accagagaggaatgagggag 199
              ||||||||||||||||||||
Sbjct: 119192 accagagaggaatgagggag 119173
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>gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, complete sequence
          Length = 157481

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     aagtccttccaggtagatgt 106
              ||||||||||||||||||||
Sbjct: 150315 aagtccttccaggtagatgt 150296
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>gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, complete sequence
          Length = 190346

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   gaagggaaatcatttgcagtatac 398
             ||||||||||||||||||| ||||
Sbjct: 56595 gaagggaaatcatttgcagcatac 56618
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>gb|AC010414.8| Homo sapiens chromosome 5 clone CTD-2169P11, complete sequence
          Length = 145156

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   gaagggaaatcatttgcagtatac 398
             ||||||||||||||||||| ||||
Sbjct: 82548 gaagggaaatcatttgcagcatac 82571
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>gb|AC010254.6| Homo sapiens chromosome 5 clone CTC-434O11, complete sequence
          Length = 172300

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  gaagggaaatcatttgcagtatac 398
            ||||||||||||||||||| ||||
Sbjct: 7072 gaagggaaatcatttgcagcatac 7049
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>gb|AC158601.5| Mus musculus 10 BAC RP23-119L9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 249420

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   agaggaatgagggagaagaa 204
             ||||||||||||||||||||
Sbjct: 49414 agaggaatgagggagaagaa 49433
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>gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome 9, complete sequence
          Length = 156478

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   cagagaggaatgagggagaa 201
             ||||||||||||||||||||
Sbjct: 58470 cagagaggaatgagggagaa 58451
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>gb|AC018897.4|AC018897 Homo sapiens BAC clone RP11-575J11 from 11, complete sequence
          Length = 164472

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   agaaaaaagaaaccagagag 188
             ||||||||||||||||||||
Sbjct: 82539 agaaaaaagaaaccagagag 82558
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>gb|AC153942.8| Mus musculus 10 BAC RP24-174M19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 146201

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   cagagaggaatgagggagaa 201
             ||||||||||||||||||||
Sbjct: 78078 cagagaggaatgagggagaa 78059
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>gb|AC125494.2| Homo sapiens 12 PAC RP4-761J14 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 143979

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   gttgaaggttaccggtctgt 466
             ||||||||||||||||||||
Sbjct: 76611 gttgaaggttaccggtctgt 76630
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>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence
          Length = 159371

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   aagcaatgtgctttacatga 346
             ||||||||||||||||||||
Sbjct: 83712 aagcaatgtgctttacatga 83693
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>emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chromosome 9, complete
             sequence
          Length = 193947

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   cagagaggaatgagggagaa 201
             ||||||||||||||||||||
Sbjct: 83099 cagagaggaatgagggagaa 83080
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>dbj|AP002984.3| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2198F5, complete
              sequence
          Length = 153042

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    agaaaaaagaaaccagagag 188
              ||||||||||||||||||||
Sbjct: 140130 agaaaaaagaaaccagagag 140149
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>gb|AC102480.8| Mus musculus chromosome 3, clone RP24-423L4, complete sequence
          Length = 189940

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 190   aatgagggagaagaagaatggggg 213
             ||||||||||||||||||| ||||
Sbjct: 30482 aatgagggagaagaagaatagggg 30505
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>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence
          Length = 201846

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   agaagataatctcaactgtt 370
             ||||||||||||||||||||
Sbjct: 47493 agaagataatctcaactgtt 47474
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>gb|AY829650.1| Capsicum annuum metallothionein-like protein type 2 mRNA, complete
           cds
          Length = 523

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 478 tgcttatgtttgtatgaagg 497
           ||||||||||||||||||||
Sbjct: 459 tgcttatgtttgtatgaagg 478
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>emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chromosome 4, complete
              sequence
          Length = 204428

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 165    gtatagaaaaaagaaaccagagag 188
              ||||||| ||||||||||||||||
Sbjct: 139289 gtatagagaaaagaaaccagagag 139312
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>emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chromosome 2, complete
            sequence
          Length = 198627

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  agatgtgggcctccattgct 120
            ||||||||||||||||||||
Sbjct: 9870 agatgtgggcctccattgct 9851
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>emb|AL844558.6| Mouse DNA sequence from clone RP23-378I2 on chromosome 2, complete
              sequence
          Length = 149164

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    aataatcacatgtgtgacaacagt 314
              ||||||||||||||| ||||||||
Sbjct: 125534 aataatcacatgtgtaacaacagt 125511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,829,104
Number of Sequences: 3902068
Number of extensions: 4829104
Number of successful extensions: 94277
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94089
Number of HSP's gapped (non-prelim): 188
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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