>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  333 bits (168), Expect = 3e-88
 Identities = 285/324 (87%)
 Strand = Plus / Plus

                                                                            
Query: 153      tttcatttctccggtgctggcacaaaggatcctcggaacagggaagtcaatcaactttct 212
                |||||||||||| || ||||| |||||||| ||  |||| ||||||||||||||||||||
Sbjct: 16579926 tttcatttctccagtactggcgcaaaggattcttagaaccgggaagtcaatcaactttct 16579985

                                                                            
Query: 213      cagagtttgatgtgatgataatggttgggatgaggctgccactgaggccgcggcctatgt 272
                 | |||||| |||||||||||||||||||  || ||||| |||||||| || | || |||
Sbjct: 16579986 taaagtttgctgtgatgataatggttgggcagatgctgctactgaggctgctgtctgtgt 16580045

                                                                            
Query: 273      tggcaccacaacaagtcgaggtgggcttggttatgggcagattgacgctttggaggcatt 332
                |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 16580046 tggcaccacaactagtcgaggtgggcttggttatgggcagattgatgctttggaggcact 16580105

                                                                            
Query: 333      ggtggtagaagcagccaagaggattgatcaacgtttgatggatgtgatccataaacgata 392
                 ||||| ||||||||||||||||||||||  | ||||||||||||||||||||| || ||
Sbjct: 16580106 agtggttgaagcagccaagaggattgatcggcatttgatggatgtgatccataagcggta 16580165

                                                                            
Query: 393      ccgatttaaagaccattgtcttgctatcaagagatatttgcttctcgggaagggtgattt 452
                 ||||| ||||| ||||||||||| || ||||| ||||||||||| ||| ||||||| ||
Sbjct: 16580166 tcgattcaaagatcattgtcttgcgattaagaggtatttgcttcttgggcagggtgactt 16580225

                                        
Query: 453      tgtacagtatctgatggatgttgt 476
                 || ||||||||||||||||||||
Sbjct: 16580226 cgtccagtatctgatggatgttgt 16580249



 Score =  141 bits (71), Expect = 2e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                            
Query: 5        tttgaaatggtccgaagctgggtgcttgaaggtgaattggaggatgtatttggcgagttc 64
                |||||||||||||||||||||||| | ||||| || ||||||||||| ||||  || |||
Sbjct: 16579789 tttgaaatggtccgaagctgggtgttagaaggggagttggaggatgtgtttgcagaattc 16579848

                                                                            
Query: 65       ttcatcgttgggcagccagtcaaggctgaatcattgtggcgggagggctaccttattcag 124
                ||||| ||||||||||||||||||||||| ||  |||||| ||||||||| ||| |||||
Sbjct: 16579849 ttcattgttgggcagccagtcaaggctgagtctctgtggcaggagggctatcttcttcag 16579908

                           
Query: 125      tctgatatgct 135
                |||||||||||
Sbjct: 16579909 tctgatatgct 16579919

>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1123_B08
          Length = 134028

 Score =  333 bits (168), Expect = 3e-88
 Identities = 285/324 (87%)
 Strand = Plus / Plus

                                                                          
Query: 153    tttcatttctccggtgctggcacaaaggatcctcggaacagggaagtcaatcaactttct 212
              |||||||||||| || ||||| |||||||| ||  |||| ||||||||||||||||||||
Sbjct: 112151 tttcatttctccagtactggcgcaaaggattcttagaaccgggaagtcaatcaactttct 112210

                                                                          
Query: 213    cagagtttgatgtgatgataatggttgggatgaggctgccactgaggccgcggcctatgt 272
               | |||||| |||||||||||||||||||  || ||||| |||||||| || | || |||
Sbjct: 112211 taaagtttgctgtgatgataatggttgggcagatgctgctactgaggctgctgtctgtgt 112270

                                                                          
Query: 273    tggcaccacaacaagtcgaggtgggcttggttatgggcagattgacgctttggaggcatt 332
              |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 112271 tggcaccacaactagtcgaggtgggcttggttatgggcagattgatgctttggaggcact 112330

                                                                          
Query: 333    ggtggtagaagcagccaagaggattgatcaacgtttgatggatgtgatccataaacgata 392
               ||||| ||||||||||||||||||||||  | ||||||||||||||||||||| || ||
Sbjct: 112331 agtggttgaagcagccaagaggattgatcggcatttgatggatgtgatccataagcggta 112390

                                                                          
Query: 393    ccgatttaaagaccattgtcttgctatcaagagatatttgcttctcgggaagggtgattt 452
               ||||| ||||| ||||||||||| || ||||| ||||||||||| ||| ||||||| ||
Sbjct: 112391 tcgattcaaagatcattgtcttgcgattaagaggtatttgcttcttgggcagggtgactt 112450

                                      
Query: 453    tgtacagtatctgatggatgttgt 476
               || ||||||||||||||||||||
Sbjct: 112451 cgtccagtatctgatggatgttgt 112474



 Score =  141 bits (71), Expect = 2e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                          
Query: 5      tttgaaatggtccgaagctgggtgcttgaaggtgaattggaggatgtatttggcgagttc 64
              |||||||||||||||||||||||| | ||||| || ||||||||||| ||||  || |||
Sbjct: 112014 tttgaaatggtccgaagctgggtgttagaaggggagttggaggatgtgtttgcagaattc 112073

                                                                          
Query: 65     ttcatcgttgggcagccagtcaaggctgaatcattgtggcgggagggctaccttattcag 124
              ||||| ||||||||||||||||||||||| ||  |||||| ||||||||| ||| |||||
Sbjct: 112074 ttcattgttgggcagccagtcaaggctgagtctctgtggcaggagggctatcttcttcag 112133

                         
Query: 125    tctgatatgct 135
              |||||||||||
Sbjct: 112134 tctgatatgct 112144

>gb|AC069523.15| Homo sapiens 3 BAC RP11-1K20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 145593

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 321    tttggaggcattggtggtaga 341
              |||||||||||||||||||||
Sbjct: 131817 tttggaggcattggtggtaga 131797

>emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 in linkage group 10,
             complete sequence
          Length = 247227

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 319   gctttggaggcattggtggta 339
             |||||||||||||||||||||
Sbjct: 40062 gctttggaggcattggtggta 40042

>gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosome 8, complete sequence
          Length = 224322

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   gggaagggtgattttgtaca 458
             ||||||||||||||||||||
Sbjct: 41607 gggaagggtgattttgtaca 41588

>ref|XM_608638.2| PREDICTED: Bos taurus similar to Deubiquitylating with USP/UBP and
            OTU domains family member (duo-1) (LOC530173), mRNA
          Length = 2675

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   atttggcgagttcttcatcg 71
            ||||||||||||||||||||
Sbjct: 1393 atttggcgagttcttcatcg 1374

>ref|XM_502913.1| Yarrowia lipolytica CLIB122, YALI0D16841g predicted mRNA
          Length = 3111

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 429  tttgcttctcgggaagggtg 448
            ||||||||||||||||||||
Sbjct: 2155 tttgcttctcgggaagggtg 2136

>emb|AL109823.23|HS1057B20 Human DNA sequence from clone RP5-1057B20 on chromosome 20q11.21-12
              Contains part of the gene for KIAA0406 protein, the gene
              for a novel protein similar to D. melanogaster CG9018
              protein and a CpG island, complete sequence
          Length = 138675

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    tacagtatctgatggatgtt 474
              ||||||||||||||||||||
Sbjct: 101403 tacagtatctgatggatgtt 101384

>gb|AC087407.27| Homo sapiens 3 BAC CTC-269B10 (CalTech Clone Library C) complete sequence
          Length = 102326

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    catttctccggtgctggcacaaag 179
              ||||||||||||| ||||||||||
Sbjct: 101906 catttctccggtggtggcacaaag 101883

>gb|AC155810.5| Mus musculus BAC clone RP24-181I18 from chromosome 8, complete sequence
          Length = 168291

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   gggaagggtgattttgtaca 458
             ||||||||||||||||||||
Sbjct: 41642 gggaagggtgattttgtaca 41661

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 385      aaacgataccgatttaaaga 404
                ||||||||||||||||||||
Sbjct: 16052325 aaacgataccgatttaaaga 16052306

>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence
          Length = 171653

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cttgaaggtgaattggagga 48
             ||||||||||||||||||||
Sbjct: 97920 cttgaaggtgaattggagga 97939

>dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0475C12
          Length = 140863

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    aaacgataccgatttaaaga 404
              ||||||||||||||||||||
Sbjct: 124364 aaacgataccgatttaaaga 124345

>emb|AL845349.13| Mouse DNA sequence from clone RP23-311F6 on chromosome 2, complete
              sequence
          Length = 180824

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    tgatgataatggttgggatg 244
              ||||||||||||||||||||
Sbjct: 141877 tgatgataatggttgggatg 141858

>emb|CT571249.11| Mouse DNA sequence from clone RP24-92E16 on chromosome 13, complete
              sequence
          Length = 125655

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    ttttgtacagtatctgatgg 469
              ||||||||||||||||||||
Sbjct: 110941 ttttgtacagtatctgatgg 110922

>emb|CT030194.5| Mouse DNA sequence from clone RP23-463F7 on chromosome 13, complete
             sequence
          Length = 195497

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   ttttgtacagtatctgatgg 469
             ||||||||||||||||||||
Sbjct: 36814 ttttgtacagtatctgatgg 36795

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 429     tttgcttctcgggaagggtg 448
               ||||||||||||||||||||
Sbjct: 2078104 tttgcttctcgggaagggtg 2078123

>gb|AC026191.4| Homo sapiens chromosome 3 clone RP11-380O24 map 3p, complete sequence
          Length = 164528

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   catttctccggtgctggcacaaag 179
             ||||||||||||| ||||||||||
Sbjct: 50474 catttctccggtggtggcacaaag 50451

>gb|AC018506.5| Homo sapiens chromosome 3 clone RP11-58B17 map 3p, complete sequence
          Length = 191575

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    catttctccggtgctggcacaaag 179
              ||||||||||||| ||||||||||
Sbjct: 177267 catttctccggtggtggcacaaag 177244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,734,253
Number of Sequences: 3902068
Number of extensions: 3734253
Number of successful extensions: 67063
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66973
Number of HSP's gapped (non-prelim): 90
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)