ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdm02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X57554.1|HVBLT14 H. vulgare BLT14 mRNA 950 0.0
2gb|L28091.1|BLYTRA Hordeum vulgare transmembrane protein mRNA fr... 950 0.0
3emb|AJ132439.1|TAE132439 Triticum aestivum mRNA for protein enco... 357 2e-95
4gb|M60733.1|BLYCLDAB Hordeum vulgare cold-regulated mRNA, partia... 172 7e-40
5gb|AF271260.1|AF271260 Triticum aestivum cold-responsive protein... 147 4e-32
6gb|L28093.1|WHTCOREG Triticum aestivum pTACR7 (tacr7) mRNA, part... 101 2e-18
7emb|Z23257.1|SCRLT141A S.cereale RLT1412 mRNA, complete CDS 101 2e-18
8emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene 100 9e-18
9emb|X97916.1|HVBLT141 H.vulgare blt14.1 gene 94 5e-16
10gb|L28092.1|BLYTRAA Hordeum vulgare transmembrane protein mRNA f... 94 5e-16
11gb|AF069331.2|AF069331 Hordeum vulgare clone BLTI-5 low temperat... 86 1e-13
12emb|Y14061.1|HVY14061 Hordeum vulgare mRNA for a cold-regulated ... 86 1e-13
13emb|Z23258.1|SCACCPROA S.cereale acclimation protein mRNA, compl... 68 3e-08
14ref|XM_414354.1| PREDICTED: Gallus gallus similar to cadherin EG... 42 1.7
15emb|AL021175.1|CEY6E2A Caenorhabditis elegans YAC Y6E2A, complet... 42 1.7
16emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chro... 42 1.7
17gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, comple... 42 1.7
18ref|NM_074515.3| Caenorhabditis elegans Seven TM Receptor family... 42 1.7
19gb|AF033703.1|AF033703 Notoacmaea petterdi histone H3 gene, part... 42 1.7
20gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Can... 40 6.9
21gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.9
22ref|XM_760214.1| Theileria parva strain Muguga hypothetical prot... 40 6.9
23emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on ch... 40 6.9
24emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chro... 40 6.9
25emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.9
26emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 6.9
27dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.9
28gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complet... 40 6.9
29gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, comple... 40 6.9
30dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.9
31dbj|AK132876.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.9
32gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Canc... 40 6.9
33gb|AC012519.9|AC012519 Homo sapiens 3 BAC RP11-1036F1 (Roswell P... 40 6.9
34emb|CR854904.9| Zebrafish DNA sequence from clone CH211-214F6 in... 40 6.9
35gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.9 
>emb|X57554.1|HVBLT14 H. vulgare BLT14 mRNA
          Length = 514

 Score =  950 bits (479), Expect = 0.0
 Identities = 495/499 (99%), Gaps = 1/499 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtctcgtcagtagtaatatcaaaacttctcagtgagcaatggcaaagagtctcgccgtcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gtctcgtcagtagtaatatcaaaacttctcagtgagcaatggcaaagagtctcgccgtcg 61

                                                                       
Query: 61  cgctcc-tgctactggtggtgctcgcgtcatgcgacgggcgggagctgaaagagaaggtt 119
           |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 62  cgctccgtgctactggtggtgctcgcgtcatgcgacgggcgggacgtgaaagagaaggtt 121

                                                                       
Query: 120 gcagcgacacacggtgccggtgccagcggtggcgtcggcgactccaaggctttggacttg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcagcgacacacggtgccggtgccagcggtggcgtcggcgactccaaggctttggacttg 181

                                                                       
Query: 180 cctctgctggggggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatc 239
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccgctgctggggggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatc 241

                                                                       
Query: 240 cctgggatccctgctatcggcccatgatcatctctacctcatgtgctggcgctacaagaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cctgggatccctgctatcggcccatgatcatctctacctcatgtgctggcgctacaagaa 301

                                                                       
Query: 300 gctaaagctcgccttgtccctttagattctataggtagcaccgccaggaagaaaaaggcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctaaagctcgccttgtccctttagattctataggtagcaccgccaggaagaaaaaggcc 361

                                                                       
Query: 360 gacgtttcgctcatgtccatgttcggtactgagcgtctgtatcaactgtcatctgtattt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gacgtttcgctcatgtccatgttcggtactgagcgtctgtatcaactgtcatctgtattt 421

                                                                       
Query: 420 atttccagttcccgtctcgtatttttcgttccttgtgcgctacatgtatcaacaatgaca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atttccagttcccgtctcgtatttttcgttccttgtgcgctacatgtatcaacaatgaca 481

                              
Query: 480 taataaatacgtacttact 498
           |||||||||||||||||||
Sbjct: 482 taataaatacgtacttact 500
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>gb|L28091.1|BLYTRA Hordeum vulgare transmembrane protein mRNA fragment
          Length = 541

 Score =  950 bits (479), Expect = 0.0
 Identities = 485/487 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtctcgtcagtagtaatatcaaaacttctcagtgagcaatggcaaagagtctcgccgtcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32  gtctcgtcagtagtaatatcaaaacttctcagtgagcaatggcaaagagtctcgccgtcg 91

                                                                       
Query: 61  cgctcctgctactggtggtgctcgcgtcatgcgacgggcgggagctgaaagagaaggttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  cgctcctgctactggtggtgctcgcgtcatgcgacgggcgggagctgaaagagaaggttg 151

                                                                       
Query: 121 cagcgacacacggtgccggtgccagcggtggcgtcggcgactccaaggctttggacttgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cagcgacacacggtgccggtgccagcggtggcgtcggcgactccaaggctttggacttgc 211

                                                                       
Query: 181 ctctgctggggggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctctgctggggggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatcc 271

                                                                       
Query: 241 ctgggatccctgctatcggcccatgatcatctctacctcatgtgctggcgctacaagaag 300
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 272 ctgggatccctgctatcggcccatgatcatctctacctcatgtcgtggcgctacaagaag 331

                                                                       
Query: 301 ctaaagctcgccttgtccctttagattctataggtagcaccgccaggaagaaaaaggccg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctaaagctcgccttgtccctttagattctataggtagcaccgccaggaagaaaaaggccg 391

                                                                       
Query: 361 acgtttcgctcatgtccatgttcggtactgagcgtctgtatcaactgtcatctgtattta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 acgtttcgctcatgtccatgttcggtactgagcgtctgtatcaactgtcatctgtattta 451

                                                                       
Query: 421 tttccagttcccgtctcgtatttttcgttccttgtgcgctacatgtatcaacaatgacat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttccagttcccgtctcgtatttttcgttccttgtgcgctacatgtatcaacaatgacat 511

                  
Query: 481 aataaat 487
           |||||||
Sbjct: 512 aataaat 518
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>emb|AJ132439.1|TAE132439 Triticum aestivum mRNA for protein encoded by lt1.1 gene, partial
          Length = 416

 Score =  357 bits (180), Expect = 2e-95
 Identities = 335/382 (87%), Gaps = 6/382 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  gcgacgggcgggagctgaaagagaaggttgcagcgacacacggtgccggtgccagcggtg 150
           |||| ||| |||||||||| ||||||||||||||||| |  |  |  |||||  | || |
Sbjct: 4   gcgaagggagggagctgaatgagaaggttgcagcgacgcgtgtcgtaggtgcgggtggcg 63

                                                                       
Query: 151 gcgtcggcgactccaaggctttggacttgcctctgctggggggaaccggtaccggaacaa 210
           |||||||||| || ||||| |||||||||||| |||| |||||||||||||| ||||| |
Sbjct: 64  gcgtcggcgagtctaaggcgttggacttgcctttgctcgggggaaccggtacgggaacca 123

                                                                       
Query: 211 gcaccattaccggcccgctggtggtgatccctgggatccctgctatcggcccatgatcat 270
           |||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||
Sbjct: 124 gcaccattaccggcccgctggtggtgcttcctgggatccctgctattggcccatgatcat 183

                                                                       
Query: 271 ctctacctcatgtgctggcgctacaagaagctaaagctcgccttgtccctttagattcta 330
           ||||  |||||||||||||  |||||| ||||||||||||||||||| ||||||||||| 
Sbjct: 184 ctctggctcatgtgctggc-ttacaaggagctaaagctcgccttgtcgctttagattctg 242

                                                                       
Query: 331 taggtagcaccgccaggaagaaaaaggccgacgtttcgctcatgtccatgttcggtactg 390
           |||||||||||||| ||||| |||| || ||||||| |||||| ||||||||||||||||
Sbjct: 243 taggtagcaccgccgggaaggaaaaagcggacgttttgctcatttccatgttcggtactg 302

                                                                       
Query: 391 agcgtctgtatcaactgtcatctg---tatttatttccagttcccg-tctcgtatttttc 446
           |||| |||||||||||||||||||   ||| ||||||||||||  | |||||||||||||
Sbjct: 303 agcgcctgtatcaactgtcatctgtactatctatttccagttcatgttctcgtatttttc 362

                                 
Query: 447 gttccttg-tgcgctacatgta 467
           |||||||| || ||||||||||
Sbjct: 363 gttccttgatgtgctacatgta 384
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>gb|M60733.1|BLYCLDAB Hordeum vulgare cold-regulated mRNA, partial cds
          Length = 770

 Score =  172 bits (87), Expect = 7e-40
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 36  gcaatggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgac 95
           |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 253 gcaatggcaaagtgtctcgccgtcgcgctcctgctagtggtgctgctcgcgtcctgcgac 312

                                                                       
Query: 96  gggcgggagctgaaagagaaggttgcagcgacacacggtgccggtgccagcggtggcgtc 155
           ||| |||||||||| ||||||| ||||||||||| ||||||||||| | |||| ||||||
Sbjct: 313 gggagggagctgaacgagaaggctgcagcgacacgcggtgccggtgtcggcggcggcgtc 372

                          
Query: 156 ggcgactccaaggct 170
           ||||| |||||||||
Sbjct: 373 ggcgagtccaaggct 387



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 accattaccggcccgctggtggtg 236
           ||||||||||||||| ||||||||
Sbjct: 523 accattaccggcccggtggtggtg 546
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>gb|AF271260.1|AF271260 Triticum aestivum cold-responsive protein (Wlt10) mRNA, complete
           cds
          Length = 548

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Plus

                                                                       
Query: 30  cagtgagcaatggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtca 89
           |||| ||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||| 
Sbjct: 40  cagttagcaatggcgaagtgtctcgccgccgcgctcctgctactggcggtgctcgcgtcc 99

                                                             
Query: 90  tgcgacgggcgggagctgaaagagaaggttgcagcgacacacggtgccgg 139
           ||||||||| |||||||||| ||||||||||||||||||| |||||||||
Sbjct: 100 tgcgacgggagggagctgaacgagaaggttgcagcgacacgcggtgccgg 149
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>gb|L28093.1|WHTCOREG Triticum aestivum pTACR7 (tacr7) mRNA, partial cds
          Length = 292

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 192 ggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatccctgggatccct 251
           ||||||| |||||| || ||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 218 ggaaccgttaccggtaccagcaccattaccggcccgctggtggtgcttcctgggatccct 277

                          
Query: 252 gctatcggcccatga 266
           ||| |||||||||||
Sbjct: 278 gctctcggcccatga 292



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                       
Query: 39  atggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgacggg 98
           ||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||
Sbjct: 50  atggcaaagagtctcgccgtcgcgctcctcctactggtggcgctcgcgtactgcgacggg 109

                      
Query: 99  cgggagctgaa 109
            ||||||||||
Sbjct: 110 agggagctgaa 120
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>emb|Z23257.1|SCRLT141A S.cereale RLT1412 mRNA, complete CDS
          Length = 525

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                       
Query: 39  atggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgacggg 98
           ||||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||||
Sbjct: 46  atggcaaagtgtctcgccgccgcgctcctgctactggtggtgctcgcgtactgcgacggg 105

                      
Query: 99  cgggagctgaa 109
            ||||||||||
Sbjct: 106 agggagctgaa 116



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 362 cgtttcgctcatgtccatgttcggtactgagcgtctgtatcaact 406
           ||||||||||||   |||||||  || ||||||||||||||||||
Sbjct: 384 cgtttcgctcattagcatgttccttaatgagcgtctgtatcaact 428
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>emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene
          Length = 687

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 35  agcaatggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcga 94
           ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 224 agcaatggcgaagtgtcttgccgtcgcgctcctgctactggtggtgctcgcgtcctgcga 283

                         
Query: 95  cgggcgggagctga 108
            ||| |||||||||
Sbjct: 284 tgggagggagctga 297



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 191 gggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatccctggg 245
           ||||||||||||||| || || ||||||| |||||||||||||||||| ||||||
Sbjct: 404 gggaaccggtaccggtaccagtaccattaacggcccgctggtggtgattcctggg 458
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>emb|X97916.1|HVBLT141 H.vulgare blt14.1 gene
          Length = 963

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 39  atggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgacggg 98
           ||||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||| 
Sbjct: 421 atggcaaagtgtctcgccgccgcgctcctgctactggtggtgctcgcgtactgcgacggt 480

                      
Query: 99  cgggagctgaa 109
            ||||||||||
Sbjct: 481 agggagctgaa 491



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 131 cggtgccggtgccagcggtggcgtcggcga 160
           ||||||||||||| | ||||||||||||||
Sbjct: 528 cggtgccggtgccggtggtggcgtcggcga 557
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>gb|L28092.1|BLYTRAA Hordeum vulgare transmembrane protein mRNA fragment
          Length = 642

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 39  atggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgacggg 98
           ||||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||| 
Sbjct: 112 atggcaaagtgtctcgccgccgcgctcctgctactggtggtgctcgcgtactgcgacggt 171

                      
Query: 99  cgggagctgaa 109
            ||||||||||
Sbjct: 172 agggagctgaa 182



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 131 cggtgccggtgccagcggtggcgtcggcga 160
           ||||||||||||| | ||||||||||||||
Sbjct: 219 cggtgccggtgccggtggtggcgtcggcga 248
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>gb|AF069331.2|AF069331 Hordeum vulgare clone BLTI-5 low temperature induced protein mRNA,
           complete cds
          Length = 546

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 39  atggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgacggg 98
           ||||||||| | ||||||||||||||||| |||||||||| ||||||||  |||||||||
Sbjct: 101 atggcaaagtgcctcgccgtcgcgctcctcctactggtggcgctcgcgtactgcgacggg 160

                      
Query: 99  cgggagctgaa 109
            ||||||||||
Sbjct: 161 agggagctgaa 171



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 82/99 (82%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                       
Query: 191 gggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatccctgggatccc 250
           |||||| | |||||| || ||||||| || ||||||| |||||||| | |||||||||||
Sbjct: 259 gggaacagttaccggtaccagcaccactaacggcccgttggtggtgcttcctgggatccc 318

                                                  
Query: 251 tgctatcggcccatgatcatctctacctcatgtgctggc 289
           ||||     |||||||||||| |||  ||||||||||||
Sbjct: 319 tgct---cacccatgatcatcactagttcatgtgctggc 354
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>emb|Y14061.1|HVY14061 Hordeum vulgare mRNA for a cold-regulated protein
          Length = 484

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 39  atggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtcatgcgacggg 98
           ||||||||| | ||||||||||||||||| |||||||||| ||||||||  |||||||||
Sbjct: 24  atggcaaagtgcctcgccgtcgcgctcctcctactggtggcgctcgcgtactgcgacggg 83

                      
Query: 99  cgggagctgaa 109
            ||||||||||
Sbjct: 84  agggagctgaa 94



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 82/99 (82%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                       
Query: 191 gggaaccggtaccggaacaagcaccattaccggcccgctggtggtgatccctgggatccc 250
           |||||||| ||| || || ||||||| || ||||||| |||||||| | |||||||||||
Sbjct: 182 gggaaccgttactggtaccagcaccactaacggcccgttggtggtgcttcctgggatccc 241

                                                  
Query: 251 tgctatcggcccatgatcatctctacctcatgtgctggc 289
           ||||     |||||||||||| |||  ||||||||||||
Sbjct: 242 tgct---cacccatgatcatcactagttcatgtgctggc 277
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>emb|Z23258.1|SCACCPROA S.cereale acclimation protein mRNA, complete CDS
          Length = 479

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 64  tcctgctactggtggtgctcgcgtcatgcgacgggcgggagctgaaagagaagg 117
           |||||||||||||||||||||| || ||||| ||| |||||||||| |||||||
Sbjct: 1   tcctgctactggtggtgctcgcctcctgcgaagggagggagctgaacgagaagg 54



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 200 taccggaacaagcaccattaccggcccgctggtggtgatccctgggatccctg 252
           ||||||||| || ||||||| |||||||||||||||||| |||||||| ||||
Sbjct: 152 taccggaaccagtaccattaacggcccgctggtggtgattcctgggattcctg 204
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>ref|XM_414354.1| PREDICTED: Gallus gallus similar to cadherin EGF LAG seven-pass
            G-type receptor 3; multiple EGF-like domains 2;
            EGF-like-domain, multiple 1; epidermal growth factor-like
            1; cadherin EGF LAG seven-pass G-type receptor 3,
            flamingo (Drosophila) homolog (LOC416011), mRNA
          Length = 12274

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  taccggcccgctggtggtgat 238
            |||||||||||||||||||||
Sbjct: 3655 taccggcccgctggtggtgat 3635
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>emb|AL021175.1|CEY6E2A Caenorhabditis elegans YAC Y6E2A, complete sequence
          Length = 22377

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    aaacttctcagtgagcaatgg 42
             |||||||||||||||||||||
Sbjct: 22192 aaacttctcagtgagcaatgg 22172
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>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
              sequence
          Length = 158069

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 229    tggtggtgatccctgggatcc 249
              |||||||||||||||||||||
Sbjct: 152929 tggtggtgatccctgggatcc 152949
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>gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, complete sequence
          Length = 178780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     tagtaatatcaaaacttctca 31
              |||||||||||||||||||||
Sbjct: 136945 tagtaatatcaaaacttctca 136925
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>ref|NM_074515.3| Caenorhabditis elegans Seven TM Receptor family member (str-38)
           (str-38) mRNA, complete cds
          Length = 1825

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 22  aaacttctcagtgagcaatgg 42
           |||||||||||||||||||||
Sbjct: 805 aaacttctcagtgagcaatgg 825
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>gb|AF033703.1|AF033703 Notoacmaea petterdi histone H3 gene, partial cds
          Length = 274

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gcgctcctgctactggtggtg 80
          |||||||||||||||||||||
Sbjct: 45 gcgctcctgctactggtggtg 65
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>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 192392

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    atgatcatctctacctcatg 282
              ||||||||||||||||||||
Sbjct: 173201 atgatcatctctacctcatg 173220



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    atgatcatctctacctcatg 282
              ||||||||||||||||||||
Sbjct: 163063 atgatcatctctacctcatg 163082
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>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1
             of 11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   aacaatgacataataaatac 489
             ||||||||||||||||||||
Sbjct: 68283 aacaatgacataataaatac 68264
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>ref|XM_760214.1| Theileria parva strain Muguga hypothetical protein (TP02_0740)
           partial mRNA
          Length = 771

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 468 tcaacaatgacataataaat 487
           ||||||||||||||||||||
Sbjct: 680 tcaacaatgacataataaat 699
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>emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on chromosome 9 Contains a
             novel gene (FLJ33868) and 2 CpG islands, complete sequence
          Length = 174911

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   tggacttgcctctgctgggg 191
             ||||||||||||||||||||
Sbjct: 16353 tggacttgcctctgctgggg 16334
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>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the
             SLC10A2 gene for solute carrier family 10 (sodium/bile
             acid cotransporter family, member 2, complete sequence
          Length = 171132

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   aacaatgacataataaatac 489
             ||||||||||||||||||||
Sbjct: 49463 aacaatgacataataaatac 49444
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    cggtgccggtgccagcggtg 150
              ||||||||||||||||||||
Sbjct: 118069 cggtgccggtgccagcggtg 118088
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>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             3/8
          Length = 347625

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   cggtgccagcggtggcgtcggcga 160
             ||||||||||||||||| ||||||
Sbjct: 84873 cggtgccagcggtggcgacggcga 84896
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 137     cggtgccagcggtggcgtcggcga 160
               ||||||| ||||||||||||||||
Sbjct: 3131621 cggtgcccgcggtggcgtcggcga 3131598
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>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence
          Length = 48498

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  cacggtgccggtgccagcgg 148
            ||||||||||||||||||||
Sbjct: 9292 cacggtgccggtgccagcgg 9273
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>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    cacggtgccggtgccagcgg 148
              ||||||||||||||||||||
Sbjct: 156807 cacggtgccggtgccagcgg 156788
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     caccattaccggcccgctgg 231
               ||||||||||||||||||||
Sbjct: 2825839 caccattaccggcccgctgg 2825820
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>dbj|AK132876.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930473F20 product:unclassifiable, full
            insert sequence
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  atgatcatctctacctcatg 282
            ||||||||||||||||||||
Sbjct: 1190 atgatcatctctacctcatg 1171
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>gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 183269

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   atgatcatctctacctcatg 282
             ||||||||||||||||||||
Sbjct: 23157 atgatcatctctacctcatg 23176



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   atgatcatctctacctcatg 282
             ||||||||||||||||||||
Sbjct: 13019 atgatcatctctacctcatg 13038
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>gb|AC012519.9|AC012519 Homo sapiens 3 BAC RP11-1036F1 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 184447

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 406  tgtcatctgtatttatttcc 425
            ||||||||||||||||||||
Sbjct: 1432 tgtcatctgtatttatttcc 1413
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>emb|CR854904.9| Zebrafish DNA sequence from clone CH211-214F6 in linkage group 10,
             complete sequence
          Length = 116150

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   gcgctacaagaagctaaagctcgc 311
             |||||||||||||||||| |||||
Sbjct: 32908 gcgctacaagaagctaaaactcgc 32931
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 137     cggtgccagcggtggcgtcggcga 160
               ||||||| ||||||||||||||||
Sbjct: 3138929 cggtgcccgcggtggcgtcggcga 3138906


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,027,731
Number of Sequences: 3902068
Number of extensions: 4027731
Number of successful extensions: 72099
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71878
Number of HSP's gapped (non-prelim): 218
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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