ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdl06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
2dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
3ref|XM_467753.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
4dbj|AK061274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5gb|AY108984.1| Zea mays PCO142910 mRNA sequence 70 8e-09
6gb|AC144531.2| Homo sapiens 3 BAC RP11-945M2 (Roswell Park Cance... 48 0.028
7gb|AC022775.16| Mus musculus chromosome 15, clone RP23-71O17, co... 44 0.44
8ref|NM_175503.2| Mus musculus alanine and arginine rich domain c... 44 0.44
9gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa,... 44 0.44
10gb|AY340971.1| Sus scrofa forkhead transcription factor L2 (FoxL... 44 0.44
11gb|AC160550.6| Mus musculus chromosome 15, clone RP23-284G10, co... 44 0.44
12dbj|AK046414.1| Mus musculus adult male corpora quadrigemina cDN... 44 0.44
13gb|AY134665.1| Mus musculus alanine and arginine rich domain con... 44 0.44
14gb|BC089505.1| Mus musculus alanine and arginine rich domain con... 44 0.44
15gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.7
16gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.7
17gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.7
18ref|NM_001786.2| Homo sapiens cell division cycle 2, G1 to S and... 42 1.7
19ref|NM_008468.2| Mus musculus karyopherin (importin) alpha 6 (Kp... 42 1.7
20gb|AY340972.1| Oryctolagus cuniculus forkhead transcription fact... 42 1.7
21emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.7
22ref|XM_571340.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.7
23gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, comple... 42 1.7
24gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
25emb|CR933728.1| Homo sapiens mRNA; cDNA DKFZp686L20222 (from clo... 42 1.7
26emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.7
27emb|CR858299.1| Pongo pygmaeus mRNA; cDNA DKFZp468D087 (from clo... 42 1.7
28gb|AF512554.1| Homo sapiens cell division cycle 2, G1 to S and G... 42 1.7
29gb|AC027678.11| Homo sapiens chromosome 10 clone RP11-97A17, com... 42 1.7
30gb|AC022390.9| Homo sapiens chromosome 10 clone RP11-131N11, com... 42 1.7
31dbj|AK154882.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.7
32dbj|AB169033.1| Macaca fascicularis testis cDNA, clone: QtsA-167... 42 1.7
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35gb|AE005020.1| Halobacterium sp. NRC-1 section 51 of 170 of the ... 42 1.7
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
38emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
39emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.7
40gb|BC107750.1| Homo sapiens cell division cycle 2, G1 to S and G... 42 1.7
41gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, comple... 42 1.7
42emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on ch... 42 1.7
43gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, comp... 40 6.9
44ref|NM_188491.1| Oryza sativa (japonica cultivar-group), predic... 40 6.9
45ref|XM_588771.2| PREDICTED: Bos taurus similar to metastasis ass... 40 6.9
46gb|BC058390.1| Mus musculus pre B-cell leukemia transcription fa... 40 6.9
47gb|AY500145.1| Craterostigma plantagineum expansin A2 (EXPA2) mR... 40 6.9
48ref|XM_974744.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.9
49ref|XM_001004150.1| PREDICTED: Mus musculus hypothetical protein... 40 6.9
50ref|XM_001003209.1| PREDICTED: Mus musculus similar to Pre-B-cel... 40 6.9
51ref|XM_001003206.1| PREDICTED: Mus musculus similar to Pre-B-cel... 40 6.9
52ref|XM_001003217.1| PREDICTED: Mus musculus similar to Pre-B-cel... 40 6.9
53ref|XM_741613.1| Aspergillus fumigatus Af293 hypothetical protei... 40 6.9
54gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosom... 40 6.9
55gb|AC112152.4| Mus musculus BAC clone RP24-93F24 from chromosome... 40 6.9
56gb|BC002244.1| Mus musculus pre B-cell leukemia transcription fa... 40 6.9
57gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, com... 40 6.9
58gb|AC183612.3| Pan troglodytes BAC clone CH251-194C16 from chrom... 40 6.9
59gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.9
60gb|BC054376.1| Mus musculus pre B-cell leukemia transcription fa... 40 6.9
61emb|AL109941.17|HSJ435K13 Human DNA sequence from clone RP3-435K... 40 6.9
62gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, co... 40 6.9
63dbj|AK146387.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 40 6.9
64dbj|AK166287.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 6.9
65dbj|AB169602.1| Macaca fascicularis brain cDNA, clone: QnpA-1623... 40 6.9
66dbj|AB168234.1| Macaca fascicularis testis cDNA clone: QtsA-1065... 40 6.9
67dbj|AK084143.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 6.9
68gb|AY052652.2| Chlamydomonas reinhardtii gamete-specific homeodo... 40 6.9
69gb|AF108140.2| Chlamydomonas reinhardtii gamete-specific homeodo... 40 6.9
70gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.9
71dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
72dbj|AB221563.1| Mus musculus cDNA pooled tissues:(tissue_type=br... 40 6.9
73ref|NM_183355.1| Mus musculus pre B-cell leukemia transcription ... 40 6.9
74ref|NM_008783.1| Mus musculus pre B-cell leukemia transcription ... 40 6.9
75gb|AC005294.1| Homo sapiens 12 BAC GSHB-410F4 (Genome Systems Hu... 40 6.9
76ref|XM_221511.2| PREDICTED: Rattus norvegicus homeo box D13 (pre... 40 6.9
77emb|BX322570.4| Zebrafish DNA sequence from clone DKEY-27H10 in ... 40 6.9
78dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
79dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
80gb|AC116554.26| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 6.9
81dbj|AK103304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
82gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19... 40 6.9
83emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on ch... 40 6.9
84gb|AF020197.1|AF020197 Mus musculus transcription factor PBX1b (... 40 6.9
85gb|AF020196.1|AF020196 Mus musculus transcription factor PBX1a (... 40 6.9
86dbj|D10480.1|RATCALAA Rat gene for calcineurin A alpha, promoter... 40 6.9
87gb|L27453.1|MUSPBX Mus musculus PBX1B mRNA, complete cds 40 6.9 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  103 bits (52), Expect = 6e-19
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                            
Query: 315      ttgcagattgcgcagtataaatcgaatctcttctcccaattgtcagttgaggggaagaac 374
                ||||||||||| ||||||||||| || ||||| |||||||||     ||  |||||||||
Sbjct: 31229657 ttgcagattgcacagtataaatcaaagctcttttcccaattgatgactgctgggaagaac 31229716

                                                                            
Query: 375      attctggagcttggtgttggaacaggccccaacttaaagtactacgcaagtgctgatggg 434
                ||||| || |||||||||||||||||||| ||  | |||||||| |||| ||| ||||| 
Sbjct: 31229717 attcttgaacttggtgttggaacaggccctaatctcaagtactatgcaaatgccgatggc 31229776

                                                                        
Query: 435      gtaaatgtaattggggtggatcctaacatgtacatggaggagtattctagagcagc 490
                || ||  || |||||||||||||||| |   |||||||||||||| | ||||||||
Sbjct: 31229777 gttaacatagttggggtggatcctaataaacacatggaggagtatgccagagcagc 31229832



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 218      gtgatgcttcagcgggtgcacccagcgaggccgggctggtacgagaagctctacgcgacg 277
                ||||||||| ||||||||||||| || |||||||  |||||||||||| |||| || |||
Sbjct: 31229098 gtgatgcttgagcgggtgcaccctgccaggccggagtggtacgagaagttctatgccacg 31229157

                            
Query: 278      gccatggacaag 289
                ||||||||||||
Sbjct: 31229158 gccatggacaag 31229169
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1734_E02
          Length = 168566

 Score =  103 bits (52), Expect = 6e-19
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                          
Query: 315    ttgcagattgcgcagtataaatcgaatctcttctcccaattgtcagttgaggggaagaac 374
              ||||||||||| ||||||||||| || ||||| |||||||||     ||  |||||||||
Sbjct: 109500 ttgcagattgcacagtataaatcaaagctcttttcccaattgatgactgctgggaagaac 109559

                                                                          
Query: 375    attctggagcttggtgttggaacaggccccaacttaaagtactacgcaagtgctgatggg 434
              ||||| || |||||||||||||||||||| ||  | |||||||| |||| ||| ||||| 
Sbjct: 109560 attcttgaacttggtgttggaacaggccctaatctcaagtactatgcaaatgccgatggc 109619

                                                                      
Query: 435    gtaaatgtaattggggtggatcctaacatgtacatggaggagtattctagagcagc 490
              || ||  || |||||||||||||||| |   |||||||||||||| | ||||||||
Sbjct: 109620 gttaacatagttggggtggatcctaataaacacatggaggagtatgccagagcagc 109675



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                          
Query: 218    gtgatgcttcagcgggtgcacccagcgaggccgggctggtacgagaagctctacgcgacg 277
              ||||||||| ||||||||||||| || |||||||  |||||||||||| |||| || |||
Sbjct: 108941 gtgatgcttgagcgggtgcaccctgccaggccggagtggtacgagaagttctatgccacg 109000

                          
Query: 278    gccatggacaag 289
              ||||||||||||
Sbjct: 109001 gccatggacaag 109012
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>ref|XM_467753.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1022

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 141/172 (81%)
 Strand = Plus / Plus

                                                                       
Query: 319 agattgcgcagtataaatcgaatctcttctcccaattgtcagttgaggggaagaacattc 378
           ||||||| ||||||||||| || ||||| |||||||||     ||  |||||||||||||
Sbjct: 363 agattgcacagtataaatcaaagctcttttcccaattgatgactgctgggaagaacattc 422

                                                                       
Query: 379 tggagcttggtgttggaacaggccccaacttaaagtactacgcaagtgctgatggggtaa 438
           | || |||||||||||||||||||| ||  | |||||||| |||| ||| ||||| || |
Sbjct: 423 ttgaacttggtgttggaacaggccctaatctcaagtactatgcaaatgccgatggcgtta 482

                                                               
Query: 439 atgtaattggggtggatcctaacatgtacatggaggagtattctagagcagc 490
           |  || |||||||||||||||| |   |||||||||||||| | ||||||||
Sbjct: 483 acatagttggggtggatcctaataaacacatggaggagtatgccagagcagc 534



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 207 tcgacccggacgtgatgcttcagcgggtgcacccagcgaggccgggctggtacgagaagc 266
           ||||||| || ||||||||| ||||||||||||| || |||||||  |||||||||||| 
Sbjct: 258 tcgaccccgaagtgatgcttgagcgggtgcaccctgccaggccggagtggtacgagaagt 317

                                  
Query: 267 tctacgcgacggccatggacaag 289
           |||| || |||||||||||||||
Sbjct: 318 tctatgccacggccatggacaag 340
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>dbj|AK061274.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E04, full
           insert sequence
          Length = 1022

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 141/172 (81%)
 Strand = Plus / Plus

                                                                       
Query: 319 agattgcgcagtataaatcgaatctcttctcccaattgtcagttgaggggaagaacattc 378
           ||||||| ||||||||||| || ||||| |||||||||     ||  |||||||||||||
Sbjct: 363 agattgcacagtataaatcaaagctcttttcccaattgatgactgctgggaagaacattc 422

                                                                       
Query: 379 tggagcttggtgttggaacaggccccaacttaaagtactacgcaagtgctgatggggtaa 438
           | || |||||||||||||||||||| ||  | |||||||| |||| ||| ||||| || |
Sbjct: 423 ttgaacttggtgttggaacaggccctaatctcaagtactatgcaaatgccgatggcgtta 482

                                                               
Query: 439 atgtaattggggtggatcctaacatgtacatggaggagtattctagagcagc 490
           |  || |||||||||||||||| |   |||||||||||||| | ||||||||
Sbjct: 483 acatagttggggtggatcctaataaacacatggaggagtatgccagagcagc 534



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 207 tcgacccggacgtgatgcttcagcgggtgcacccagcgaggccgggctggtacgagaagc 266
           ||||||| || ||||||||| ||||||||||||| || |||||||  |||||||||||| 
Sbjct: 258 tcgaccccgaagtgatgcttgagcgggtgcaccctgccaggccggagtggtacgagaagt 317

                                  
Query: 267 tctacgcgacggccatggacaag 289
           |||| || |||||||||||||||
Sbjct: 318 tctatgccacggccatggacaag 340
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>gb|AY108984.1| Zea mays PCO142910 mRNA sequence
          Length = 506

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 92/111 (82%)
 Strand = Plus / Plus

                                                                       
Query: 369 aagaacattctggagcttggtgttggaacaggccccaacttaaagtactacgcaagtgct 428
           ||||||||||| ||||| |||||||| ||||| || ||||| || ||||| |||||||  
Sbjct: 395 aagaacattctcgagctcggtgttgggacagggcctaacttcaaatactatgcaagtgaa 454

                                                              
Query: 429 gatggggtaaatgtaattggggtggatcctaacatgtacatggaggagtat 479
           ||||| || ||||| || || ||||| ||||||| | |||||||| |||||
Sbjct: 455 gatggcgttaatgtgatcggagtggaccctaacaagcacatggagaagtat 505
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>gb|AC144531.2| Homo sapiens 3 BAC RP11-945M2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127580

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 360   gttgaggggaagaacattctggag 383
             ||||||||||||||||||||||||
Sbjct: 52667 gttgaggggaagaacattctggag 52690
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>gb|AC022775.16| Mus musculus chromosome 15, clone RP23-71O17, complete sequence
          Length = 223532

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 114   gctgccgctgcggccgccgcca 135
             ||||||||||||||||||||||
Sbjct: 15263 gctgccgctgcggccgccgcca 15242
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>ref|NM_175503.2| Mus musculus alanine and arginine rich domain containing protein
           (Aard), mRNA
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 114 gctgccgctgcggccgccgcca 135
           ||||||||||||||||||||||
Sbjct: 364 gctgccgctgcggccgccgcca 343
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>gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa, partial sequence
          Length = 67651

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 157   cgccggcctcctccatctcgtc 178
             ||||||||||||||||||||||
Sbjct: 31403 cgccggcctcctccatctcgtc 31382
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>gb|AY340971.1| Sus scrofa forkhead transcription factor L2 (FoxL2) gene, complete
           cds
          Length = 1134

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 117 gccgctgcggccgccgccatct 138
           ||||||||||||||||||||||
Sbjct: 680 gccgctgcggccgccgccatct 659
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>gb|AC160550.6| Mus musculus chromosome 15, clone RP23-284G10, complete sequence
          Length = 232182

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    gctgccgctgcggccgccgcca 135
              ||||||||||||||||||||||
Sbjct: 183197 gctgccgctgcggccgccgcca 183176
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>dbj|AK046414.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230381K07
           product:A5D3 PROTEIN homolog [Rattus norvegicus], full
           insert sequence
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 114 gctgccgctgcggccgccgcca 135
           ||||||||||||||||||||||
Sbjct: 364 gctgccgctgcggccgccgcca 343
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>gb|AY134665.1| Mus musculus alanine and arginine rich domain containing protein
           mRNA, complete cds
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 114 gctgccgctgcggccgccgcca 135
           ||||||||||||||||||||||
Sbjct: 302 gctgccgctgcggccgccgcca 281
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>gb|BC089505.1| Mus musculus alanine and arginine rich domain containing protein,
           mRNA (cDNA clone MGC:107188 IMAGE:6772439), complete cds
          Length = 1329

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 114 gctgccgctgcggccgccgcca 135
           ||||||||||||||||||||||
Sbjct: 317 gctgccgctgcggccgccgcca 296
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 114     gctgccgctgcggccgccgcc 134
               |||||||||||||||||||||
Sbjct: 1119818 gctgccgctgcggccgccgcc 1119798
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 18      gcctcgtcgcgctcccggcgg 38
               |||||||||||||||||||||
Sbjct: 3105821 gcctcgtcgcgctcccggcgg 3105841
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 157    cgccggcctcctccatctcgt 177
              |||||||||||||||||||||
Sbjct: 705961 cgccggcctcctccatctcgt 705941
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>ref|NM_001786.2| Homo sapiens cell division cycle 2, G1 to S and G2 to M (CDC2),
           transcript variant 1, mRNA
          Length = 1235

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 agctgccgctgcggccgccgc 133
           |||||||||||||||||||||
Sbjct: 69  agctgccgctgcggccgccgc 89
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>ref|NM_008468.2| Mus musculus karyopherin (importin) alpha 6 (Kpna6), mRNA
          Length = 5692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 111 gaagctgccgctgcggccgccgcca 135
           |||||| ||||||||||||||||||
Sbjct: 26  gaagctaccgctgcggccgccgcca 50
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>gb|AY340972.1| Oryctolagus cuniculus forkhead transcription factor L2 (FoxL2)
           gene, complete cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 114 gctgccgctgcggccgccgcc 134
           |||||||||||||||||||||
Sbjct: 701 gctgccgctgcggccgccgcc 681
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     gcctcgtcgcgctcccggcgg 38
              |||||||||||||||||||||
Sbjct: 250154 gcctcgtcgcgctcccggcgg 250174
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>ref|XM_571340.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNF03820) partial mRNA
          Length = 2379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 114  gctgccgctgcggccgccgcc 134
            |||||||||||||||||||||
Sbjct: 1115 gctgccgctgcggccgccgcc 1135
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>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence
          Length = 179881

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   gctgccgctgcggccgccgcc 134
             |||||||||||||||||||||
Sbjct: 24418 gctgccgctgcggccgccgcc 24438
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>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03,
              complete sequence
          Length = 157178

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 110    ggaagctgccgctgcggccgccgcc 134
              ||||||||||||||| |||||||||
Sbjct: 106288 ggaagctgccgctgccgccgccgcc 106264
to top
>emb|CR933728.1| Homo sapiens mRNA; cDNA DKFZp686L20222 (from clone DKFZp686L20222)
          Length = 3537

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 agctgccgctgcggccgccgc 133
           |||||||||||||||||||||
Sbjct: 40  agctgccgctgcggccgccgc 60
to top
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     gcctcgtcgcgctcccggcgg 38
              |||||||||||||||||||||
Sbjct: 338066 gcctcgtcgcgctcccggcgg 338086
to top
>emb|CR858299.1| Pongo pygmaeus mRNA; cDNA DKFZp468D087 (from clone DKFZp468D087)
          Length = 1890

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 agctgccgctgcggccgccgc 133
           |||||||||||||||||||||
Sbjct: 59  agctgccgctgcggccgccgc 79
to top
>gb|AF512554.1| Homo sapiens cell division cycle 2, G1 to S and G2 to M (CDC2) gene,
            complete cds
          Length = 18516

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  agctgccgctgcggccgccgc 133
            |||||||||||||||||||||
Sbjct: 1377 agctgccgctgcggccgccgc 1397
to top
>gb|AC027678.11| Homo sapiens chromosome 10 clone RP11-97A17, complete sequence
          Length = 150468

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   agctgccgctgcggccgccgc 133
             |||||||||||||||||||||
Sbjct: 15866 agctgccgctgcggccgccgc 15886
to top
>gb|AC022390.9| Homo sapiens chromosome 10 clone RP11-131N11, complete sequence
          Length = 161223

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    agctgccgctgcggccgccgc 133
              |||||||||||||||||||||
Sbjct: 111536 agctgccgctgcggccgccgc 111556
to top
>dbj|AK154882.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630110I06
           product:karyopherin (importin) alpha 6, full insert
           sequence
          Length = 5692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 111 gaagctgccgctgcggccgccgcca 135
           |||||| ||||||||||||||||||
Sbjct: 26  gaagctaccgctgcggccgccgcca 50
to top
>dbj|AB169033.1| Macaca fascicularis testis cDNA, clone: QtsA-16794, similar to
           human cell division cycle 2, G1 to S and G2 to M
           (CDC2),transcript variant 1, mRNA, RefSeq: NM_001786.2
          Length = 1278

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 agctgccgctgcggccgccgc 133
           |||||||||||||||||||||
Sbjct: 48  agctgccgctgcggccgccgc 68
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 123      gcggccgccgccatctcctcggtgc 147
                ||||||||||||| |||||||||||
Sbjct: 11037319 gcggccgccgccacctcctcggtgc 11037295
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 110     ggaagctgccgctgcggccgccgcc 134
               ||||||||||||||| |||||||||
Sbjct: 6323010 ggaagctgccgctgccgccgccgcc 6322986
to top
>gb|AE005020.1| Halobacterium sp. NRC-1 section 51 of 170 of the complete genome
          Length = 9823

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 202  agccatcgacccggacgtgat 222
            |||||||||||||||||||||
Sbjct: 6285 agccatcgacccggacgtgat 6265
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 110     ggaagctgccgctgcggccgccgcc 134
               ||||||||||||||| |||||||||
Sbjct: 6389477 ggaagctgccgctgccgccgccgcc 6389453
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 123      gcggccgccgccatctcctcggtgc 147
                ||||||||||||| |||||||||||
Sbjct: 11037018 gcggccgccgccacctcctcggtgc 11036994
to top
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 157771

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 123    gcggccgccgccatctcctcggtgc 147
              ||||||||||||| |||||||||||
Sbjct: 148856 gcggccgccgccacctcctcggtgc 148880
to top
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134082

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 123   gcggccgccgccatctcctcggtgc 147
             ||||||||||||| |||||||||||
Sbjct: 68256 gcggccgccgccacctcctcggtgc 68280
to top
>gb|BC107750.1| Homo sapiens cell division cycle 2, G1 to S and G2 to M, mRNA (cDNA
           clone MGC:111195 IMAGE:6710672), complete cds
          Length = 2010

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 agctgccgctgcggccgccgc 133
           |||||||||||||||||||||
Sbjct: 43  agctgccgctgcggccgccgc 63
to top
>gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, complete sequence
          Length = 207909

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 468   atggaggagtattctagagcagcag 492
             |||||||||| ||||||||||||||
Sbjct: 99624 atggaggagtgttctagagcagcag 99648
to top
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete
              sequence
          Length = 141790

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 111    gaagctgccgctgcggccgccgcca 135
              |||||| ||||||||||||||||||
Sbjct: 102704 gaagctaccgctgcggccgccgcca 102680
to top
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence
          Length = 203580

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   gctgccgctgcggccgccgc 133
             ||||||||||||||||||||
Sbjct: 10967 gctgccgctgcggccgccgc 10986
to top
>ref|NM_188491.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 cggccgccgccatctcctcg 143
           ||||||||||||||||||||
Sbjct: 334 cggccgccgccatctcctcg 315
to top
>ref|XM_588771.2| PREDICTED: Bos taurus similar to metastasis associated 1 (LOC511438),
            mRNA
          Length = 2919

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ctgccgctgcggccgccgcc 134
            ||||||||||||||||||||
Sbjct: 2396 ctgccgctgcggccgccgcc 2415
to top
>gb|BC058390.1| Mus musculus pre B-cell leukemia transcription factor 1, transcript
           variant a, mRNA (cDNA clone MGC:67002 IMAGE:5701148),
           complete cds
          Length = 2103

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 800 gaagctgccgctgccgccgccgcc 777
to top
>gb|AY500145.1| Craterostigma plantagineum expansin A2 (EXPA2) mRNA, partial cds
          Length = 657

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 tgcagattgcgcagtataaa 335
           ||||||||||||||||||||
Sbjct: 308 tgcagattgcgcagtataaa 327
to top
>ref|XM_974744.1| PREDICTED: Mus musculus hypothetical protein LOC669386 (LOC669386),
           mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 gctgccgctgcggccgccgc 133
           ||||||||||||||||||||
Sbjct: 136 gctgccgctgcggccgccgc 155
to top
>ref|XM_001004150.1| PREDICTED: Mus musculus hypothetical protein LOC668869 (LOC668869),
           mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 gctgccgctgcggccgccgc 133
           ||||||||||||||||||||
Sbjct: 136 gctgccgctgcggccgccgc 155
to top
>ref|XM_001003209.1| PREDICTED: Mus musculus similar to Pre-B-cell leukemia
           transcription factor 1 (Homeobox protein PBX1),
           transcript variant 2 (LOC676870), mRNA
          Length = 6284

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 203 gaagctgccgctgccgccgccgcc 180
to top
>ref|XM_001003206.1| PREDICTED: Mus musculus similar to Pre-B-cell leukemia
           transcription factor 1 (Homeobox protein PBX1),
           transcript variant 1 (LOC676870), mRNA
          Length = 6273

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 216 gaagctgccgctgccgccgccgcc 193
to top
>ref|XM_001003217.1| PREDICTED: Mus musculus similar to Pre-B-cell leukemia
           transcription factor 1 (Homeobox protein PBX1),
           transcript variant 3 (LOC676870), mRNA
          Length = 6297

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 216 gaagctgccgctgccgccgccgcc 193
to top
>ref|XM_741613.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g02260) partial
            mRNA
          Length = 2355

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  gctgccgctgcggccgccgc 133
            ||||||||||||||||||||
Sbjct: 1939 gctgccgctgcggccgccgc 1958
to top
>gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosome 3, complete sequence
          Length = 175131

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    gctgccgctgcggccgccgc 133
              ||||||||||||||||||||
Sbjct: 122433 gctgccgctgcggccgccgc 122452
to top
>gb|AC112152.4| Mus musculus BAC clone RP24-93F24 from chromosome 1, complete sequence
          Length = 198308

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    gaagctgccgctgcggccgccgcc 134
              |||||||||||||| |||||||||
Sbjct: 161305 gaagctgccgctgccgccgccgcc 161282
to top
>gb|BC002244.1| Mus musculus pre B-cell leukemia transcription factor 1, mRNA (cDNA
           clone MGC:7546 IMAGE:3492658), complete cds
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 298 gaagctgccgctgccgccgccgcc 275
to top
>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence
          Length = 216320

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    gaagctgccgctgcggccgccgcc 134
              |||||||||||||| |||||||||
Sbjct: 185520 gaagctgccgctgccgccgccgcc 185543
to top
>gb|AC183612.3| Pan troglodytes BAC clone CH251-194C16 from chromosome 12, complete
             sequence
          Length = 135756

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   tgctgatggggtaaatgtaa 444
             ||||||||||||||||||||
Sbjct: 72988 tgctgatggggtaaatgtaa 73007
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      cgtcgcgctcccggcggtcg 41
               ||||||||||||||||||||
Sbjct: 1327250 cgtcgcgctcccggcggtcg 1327269
to top
>gb|BC054376.1| Mus musculus pre B-cell leukemia transcription factor 1, mRNA (cDNA
            clone IMAGE:6314913), partial cds
          Length = 3884

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 111  gaagctgccgctgcggccgccgcc 134
            |||||||||||||| |||||||||
Sbjct: 1033 gaagctgccgctgccgccgccgcc 1010
to top
>emb|AL109941.17|HSJ435K13 Human DNA sequence from clone RP3-435K13 on chromosome 6q14.1-16.1
              Contains a novel pseudogene, complete sequence
          Length = 151301

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    tgctgatggggtaaatgtaa 444
              ||||||||||||||||||||
Sbjct: 103630 tgctgatggggtaaatgtaa 103611
to top
>gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, complete sequence
          Length = 166863

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    ctgccgctgcggccgccgcc 134
              ||||||||||||||||||||
Sbjct: 152960 ctgccgctgcggccgccgcc 152941
to top
>dbj|AK146387.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
           clone:I730068O08 product:protein phosphatase 3,
           catalytic subunit, alpha isoform, full insert sequence
          Length = 2813

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 gctgccgctgcggccgccgc 133
           ||||||||||||||||||||
Sbjct: 211 gctgccgctgcggccgccgc 192
to top
>dbj|AK166287.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
           full-length enriched library, clone:G830031G01
           product:protein phosphatase 3, catalytic subunit, alpha
           isoform, full insert sequence
          Length = 2683

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 gctgccgctgcggccgccgc 133
           ||||||||||||||||||||
Sbjct: 42  gctgccgctgcggccgccgc 23
to top
>dbj|AB169602.1| Macaca fascicularis brain cDNA, clone: QnpA-16235, similar to human
           NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,
           2,8kDa (NDUFA2), mRNA, RefSeq: NM_002488.2
          Length = 474

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 cgctgcggccgccgccatct 138
           ||||||||||||||||||||
Sbjct: 64  cgctgcggccgccgccatct 45
to top
>dbj|AB168234.1| Macaca fascicularis testis cDNA clone: QtsA-10650, similar to human
           NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,
           2,8kDa (NDUFA2), mRNA, RefSeq: NM_002488.2
          Length = 465

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 cgctgcggccgccgccatct 138
           ||||||||||||||||||||
Sbjct: 45  cgctgcggccgccgccatct 26
to top
>dbj|AK084143.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230003C07 product:pre B-cell
           leukemia transcription factor 1, full insert sequence
          Length = 1675

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 564 gaagctgccgctgccgccgccgcc 541
to top
>gb|AY052652.2| Chlamydomonas reinhardtii gamete-specific homeodomain protein (gsp1)
            gene, complete cds
          Length = 6112

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  gctgccgctgcggccgccgc 133
            ||||||||||||||||||||
Sbjct: 5719 gctgccgctgcggccgccgc 5700
to top
>gb|AF108140.2| Chlamydomonas reinhardtii gamete-specific homeodomain protein GSP1
            mRNA, complete cds
          Length = 3470

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  gctgccgctgcggccgccgc 133
            ||||||||||||||||||||
Sbjct: 3045 gctgccgctgcggccgccgc 3026
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     gctgccgctgcggccgccgc 133
               ||||||||||||||||||||
Sbjct: 2454148 gctgccgctgcggccgccgc 2454167
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     cggccgccgccatctcctcg 143
               ||||||||||||||||||||
Sbjct: 6566614 cggccgccgccatctcctcg 6566633
to top
>dbj|AB221563.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12
           days
           neonate,strain=BALB/c),(tissue_type=testis,
           dev_stage=adult, strain=C57BL/6J), clone:V01X006A13
          Length = 1044

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 407 gaagctgccgctgccgccgccgcc 384
to top
>ref|NM_183355.1| Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1),
           transcript variant a, mRNA
          Length = 2379

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 763 gaagctgccgctgccgccgccgcc 740
to top
>ref|NM_008783.1| Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1),
           transcript variant b, mRNA
          Length = 3145

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 981 gaagctgccgctgccgccgccgcc 958
to top
>gb|AC005294.1| Homo sapiens 12 BAC GSHB-410F4 (Genome Systems Human Bac Library)
              complete sequence
          Length = 113762

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    tgctgatggggtaaatgtaa 444
              ||||||||||||||||||||
Sbjct: 106582 tgctgatggggtaaatgtaa 106601
to top
>ref|XM_221511.2| PREDICTED: Rattus norvegicus homeo box D13 (predicted)
           (Hoxd13_predicted), mRNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 gctgccgctgcggccgccgc 133
           ||||||||||||||||||||
Sbjct: 176 gctgccgctgcggccgccgc 157
to top
>emb|BX322570.4| Zebrafish DNA sequence from clone DKEY-27H10 in linkage group 1,
             complete sequence
          Length = 185032

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 474   gagtattctagagcagcagc 493
             ||||||||||||||||||||
Sbjct: 75955 gagtattctagagcagcagc 75936
to top
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489G09
          Length = 148707

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    cggccgccgccatctcctcg 143
              ||||||||||||||||||||
Sbjct: 134094 cggccgccgccatctcctcg 134113
to top
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483F08
          Length = 148985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   cggccgccgccatctcctcg 143
             ||||||||||||||||||||
Sbjct: 46785 cggccgccgccatctcctcg 46804
to top
>gb|AC116554.26| Mus musculus strain C57BL/6J chromosome 1 clone rp23-139k14, complete
              sequence
          Length = 240923

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    gaagctgccgctgcggccgccgcc 134
              |||||||||||||| |||||||||
Sbjct: 112326 gaagctgccgctgccgccgccgcc 112349
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>dbj|AK103304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125D14, full
           insert sequence
          Length = 2320

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 cggccgccgccatctcctcg 143
           ||||||||||||||||||||
Sbjct: 432 cggccgccgccatctcctcg 413
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>gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 154685

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   tgctgatggggtaaatgtaa 444
             ||||||||||||||||||||
Sbjct: 81694 tgctgatggggtaaatgtaa 81675
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>emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on chromosome 2, complete
            sequence
          Length = 153645

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 434  ggtaaatgtaattggggtggatcc 457
            ||||||||||| ||||||||||||
Sbjct: 9404 ggtaaatgtaaatggggtggatcc 9427
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>gb|AF020197.1|AF020197 Mus musculus transcription factor PBX1b (PBX1b) mRNA, complete cds
          Length = 3145

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 981 gaagctgccgctgccgccgccgcc 958
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>gb|AF020196.1|AF020196 Mus musculus transcription factor PBX1a (PBX1a) mRNA, complete cds
          Length = 2379

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 763 gaagctgccgctgccgccgccgcc 740
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>dbj|D10480.1|RATCALAA Rat gene for calcineurin A alpha, promoter region and exon 1
          Length = 1833

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 gctgccgctgcggccgccgc 133
           ||||||||||||||||||||
Sbjct: 384 gctgccgctgcggccgccgc 365
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>gb|L27453.1|MUSPBX Mus musculus PBX1B mRNA, complete cds
          Length = 1634

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 gaagctgccgctgcggccgccgcc 134
           |||||||||||||| |||||||||
Sbjct: 451 gaagctgccgctgccgccgccgcc 428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,804,721
Number of Sequences: 3902068
Number of extensions: 3804721
Number of successful extensions: 76518
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75740
Number of HSP's gapped (non-prelim): 778
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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