>ref|XM_658500.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5988.2) partial
            mRNA
          Length = 3429

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 209  tttcatcggcaaactctcgaagcttt 234
            ||||||||||||| ||||||||||||
Sbjct: 2179 tttcatcggcaaagtctcgaagcttt 2154

>gb|AC164554.2| Mus musculus BAC clone RP23-351O14 from chromosome 17, complete
             sequence
          Length = 192632

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   aacatggaggacaactttttg 377
             |||||||||||||||||||||
Sbjct: 34760 aacatggaggacaactttttg 34780

>gb|AC129302.3| Mus musculus BAC clone RP24-441C24 from chromosome 2, complete sequence
          Length = 186647

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 357    aacatggaggacaactttttg 377
              |||||||||||||||||||||
Sbjct: 173514 aacatggaggacaactttttg 173534

>emb|AL008633.1|HS345B16 Human DNA sequence from clone RP3-345B16 on chromosome Xq24-26.1,
             complete sequence
          Length = 121131

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 509   tgtacaccctacagaaccatg 529
             |||||||||||||||||||||
Sbjct: 72480 tgtacaccctacagaaccatg 72500

>gb|AC008655.7| Homo sapiens chromosome 19 clone CTB-191K22, complete sequence
          Length = 123149

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 85     tccctcaggaccagcttcgcttccc 109
              |||||||||||||||| ||||||||
Sbjct: 101742 tccctcaggaccagctgcgcttccc 101766

>dbj|AP001880.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-3110P2, complete
              sequences
          Length = 169776

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 455    gatccagtcacaaataaagat 475
              |||||||||||||||||||||
Sbjct: 131442 gatccagtcacaaataaagat 131422

>emb|CT009630.16| Mouse DNA sequence from clone RP23-12B13 on chromosome 17, complete
              sequence
          Length = 240447

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    aacatggaggacaactttttg 377
              |||||||||||||||||||||
Sbjct: 148097 aacatggaggacaactttttg 148077

>emb|AL928739.5| Mouse DNA sequence from clone RP23-409L24 on chromosome 2, complete
             sequence
          Length = 153028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   aacatggaggacaactttttg 377
             |||||||||||||||||||||
Sbjct: 58816 aacatggaggacaactttttg 58796

>ref|XM_822648.1| Trypanosoma brucei TREU927 variant surface glycoprotein
           (Tb09.244.1830) partial mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 gagagacgatccagtcacaa 467
           ||||||||||||||||||||
Sbjct: 816 gagagacgatccagtcacaa 835

>gb|AC147546.1| Rattus norvegicus chromosome 1 clone RP32-323A19 map q33, complete
             sequence
          Length = 118946

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   tgcaggaaatcagagaacaa 395
             ||||||||||||||||||||
Sbjct: 87475 tgcaggaaatcagagaacaa 87456

>gb|AC154577.2| Mus musculus BAC clone RP23-375G9 from chromosome 17, complete sequence
          Length = 189549

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   aactttttgcaggaaatcagagaa 392
             ||||||||||||||||||| ||||
Sbjct: 84857 aactttttgcaggaaatcatagaa 84834

>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   ttgcaggaaatcagagaacaagtt 398
             ||||||||| ||||||||||||||
Sbjct: 40028 ttgcaggaagtcagagaacaagtt 40051

>emb|BX927073.7| Zebrafish DNA sequence from clone DKEYP-78C2 in linkage group 23,
             complete sequence
          Length = 85724

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   ctaacaatacaaatgatcat 173
             ||||||||||||||||||||
Sbjct: 34563 ctaacaatacaaatgatcat 34544

>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome
          Length = 1166239

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    ccagagaacatagaaaaaat 313
              ||||||||||||||||||||
Sbjct: 277728 ccagagaacatagaaaaaat 277747

>gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, complete sequence
          Length = 200105

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 509    tgtacaccctacagaaccat 528
              ||||||||||||||||||||
Sbjct: 123434 tgtacaccctacagaaccat 123415

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 212     catcggcaaactctcgaagc 231
               ||||||||||||||||||||
Sbjct: 1952207 catcggcaaactctcgaagc 1952226

>ref|NM_001027951.1| Caenorhabditis elegans F08G5.7 (F08G5.7) mRNA, complete cds
          Length = 1164

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 158 caatacaaatgatcatattg 177
           ||||||||||||||||||||
Sbjct: 48  caatacaaatgatcatattg 67

>gb|AC073875.6| Homo sapiens BAC clone RP11-594C24 from 2, complete sequence
          Length = 145028

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ccagacaaggatgtcttctc 139
              ||||||||||||||||||||
Sbjct: 113765 ccagacaaggatgtcttctc 113746

>dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19
          Length = 48420

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   agagaacatagaaaaaattg 315
             ||||||||||||||||||||
Sbjct: 29834 agagaacatagaaaaaattg 29853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,611,910
Number of Sequences: 3902068
Number of extensions: 4611910
Number of successful extensions: 89634
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89588
Number of HSP's gapped (non-prelim): 46
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)