ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdk23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 337 bits (170), Expect = 1e-89 Identities = 295/337 (87%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||| |||||||||||||| || ||||||||||| Sbjct: 18 gatggtgtccggctccggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacat 77 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 78 gctcggccgcctggcctcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggt 137 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 ||| || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 138 ggtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 197 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 198 ccgcttcctccgcaagcggatgaacaccaagccctcccacggccccatccacttccgcgc 257 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcgg 321 ||| | || || ||||||||||| | ||||| ||||| ||||||||||| | | || Sbjct: 258 cccggccaagatcctctggcgcaccatccgcggtatgattccgcacaagaccgcgagggg 317 Query: 322 cgaggctgcgctcgccaggcntaaggcgttcgagggc 358 |||||| ||||||||||||| ||||||| ||||||| Sbjct: 318 cgaggccgcgctcgccaggctcaaggcgtacgagggc 354
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 118 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 177 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 178 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 237 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 238 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 297 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 298 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 357 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 358 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 400
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 122 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 181 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 182 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 241 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 242 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 301 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 302 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 361 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 362 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 404
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Minus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 524644 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 524585 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 524584 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 524525 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 524524 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 524465 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 524464 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 524405 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 524404 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 524362
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Minus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 126808 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 126749 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 126748 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 126689 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126688 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 126629 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 126628 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 126569 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 126568 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 126526
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 118 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 177 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 178 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 237 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 238 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 297 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 298 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 357 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 358 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 400
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 122 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 181 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 182 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 241 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 242 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 301 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 302 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 361 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 362 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 404
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 331 bits (167), Expect = 9e-88 Identities = 254/283 (89%) Strand = Plus / Minus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 78556 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 78497 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 78496 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 78437 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 78436 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 78377 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 78376 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 78317 Query: 296 atgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 338 |||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 78316 atgatcccccacaagaccccccgcggcgaggccgccctcgcca 78274
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 315 bits (159), Expect = 5e-83 Identities = 258/291 (88%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 73 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 132 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 133 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 192 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 193 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 252 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 253 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 312 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||| | || || ||||||||||||| ||||||||||||||||||||||| Sbjct: 313 ccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaagac 363
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 315 bits (159), Expect = 5e-83 Identities = 258/291 (88%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 83 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 142 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 143 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 202 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 203 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 262 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 263 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 322 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||| | || || ||||||||||||| ||||||||||||||||||||||| Sbjct: 323 ccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaagac 373
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 315 bits (159), Expect = 5e-83 Identities = 258/291 (88%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 83 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 142 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 143 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 202 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 203 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 262 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 263 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 322 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||| | || || ||||||||||||| ||||||||||||||||||||||| Sbjct: 323 ccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaagac 373
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 280 bits (141), Expect = 3e-72 Identities = 240/273 (87%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 30899478 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 30899537 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 30899538 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 30899597 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30899598 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30899657 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30899658 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 30899717 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 30899718 ccccgccaagatcctctggcgcaccgtccgcgg 30899750 Score = 232 bits (117), Expect = 6e-58 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 30886829 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 30886770 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 30886769 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 30886710 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30886709 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30886650 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30886649 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 30886591 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 30886590 ccccgccaagatcctctggcgcaccgtccgcgg 30886558
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 280 bits (141), Expect = 3e-72 Identities = 240/273 (87%) Strand = Plus / Minus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 43612 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 43553 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 43552 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 43493 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 43492 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 43433 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 43432 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 43373 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 43372 ccccgccaagatcctctggcgcaccgtccgcgg 43340 Score = 232 bits (117), Expect = 6e-58 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 56261 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 56320 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 56321 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 56380 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 56381 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 56440 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 56441 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 56499 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 56500 ccccgccaagatcctctggcgcaccgtccgcgg 56532
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 280 bits (141), Expect = 3e-72 Identities = 240/273 (87%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 30990001 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 30990060 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 30990061 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 30990120 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30990121 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30990180 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30990181 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 30990240 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 30990241 ccccgccaagatcctctggcgcaccgtccgcgg 30990273 Score = 232 bits (117), Expect = 6e-58 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 30977352 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 30977293 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 30977292 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 30977233 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30977232 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30977173 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30977172 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 30977114 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 30977113 ccccgccaagatcctctggcgcaccgtccgcgg 30977081
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 242 bits (122), Expect = 6e-61 Identities = 221/254 (87%) Strand = Plus / Plus Query: 59 gtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctg 118 |||||||| |||||||||||||||||||| || || | |||||| | |||||||||||| Sbjct: 96 gtggtggacgcgcgccaccacatgctgggccgtctctcctcgatcatagccaaggagctg 155 Query: 119 ctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctg 178 ||||| |||||| ||||| || || || ||||||||||| ||||| || ||||| || Sbjct: 156 ctcaatgggcagaaggtggtcgtcgtccgctgcgaggagatctgcatgtcgggcggcctc 215 Query: 179 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcc 275 Query: 239 cacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatg 298 ||||| ||||||||||||||||||||| | || || | ||||||||| | ||||| ||| Sbjct: 276 cacgggcccatccacttccgcgcccccgccaagatcctgtggcgcaccatccgcgggatg 335 Query: 299 atcccgcacaagac 312 || ||||||||||| Sbjct: 336 attccgcacaagac 349
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 242 bits (122), Expect = 6e-61 Identities = 221/254 (87%) Strand = Plus / Plus Query: 59 gtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctg 118 |||||||| |||||||||||||||||||| || || | |||||| | |||||||||||| Sbjct: 584 gtggtggacgcgcgccaccacatgctgggccgtctctcctcgatcatagccaaggagctg 643 Query: 119 ctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctg 178 ||||| |||||| |||||||| || || ||||||||||| ||||| || ||||| || Sbjct: 644 ctcaatgggcagaaggtggtggtcgtccgctgcgaggagatctgcatgtcgggcggcctc 703 Query: 179 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcc 763 Query: 239 cacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatg 298 ||||| |||||||||||||||||||| | || || | ||||||||| | ||||| ||| Sbjct: 764 cacggccccatccacttccgcgccccggccaagatcctgtggcgcaccatccgcgggatg 823 Query: 299 atcccgcacaagac 312 || ||||||||||| Sbjct: 824 attccgcacaagac 837
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 232 bits (117), Expect = 6e-58 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 54287 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 54346 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 54347 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 54406 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 54407 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 54466 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 54467 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 54525 Query: 262 cccctcgaaaattttctggcgcaccgtgcgcgg 294 |||| | || || ||||||||||||| ||||| Sbjct: 54526 ccccgccaagatcctctggcgcaccgtccgcgg 54558
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 206 bits (104), Expect = 4e-50 Identities = 209/244 (85%) Strand = Plus / Plus Query: 22 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 81 |||||| ||||||||||| |||| |||| ||| | |||||||| |||||||||||||| Sbjct: 68879 gatggtttccggctccggcgtgtgcgcgaagcgcatcgtggtggacgcgcgccaccacat 68938 Query: 82 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 141 ||| |||||||| ||||||| | |||||||||||||| || |||||| ||||| || Sbjct: 68939 gctcggacgcctgtcgtcgattatcgccaaggagctgctgaatgggcagaaggtggtcgt 68998 Query: 142 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 201 || || ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| Sbjct: 68999 cgtccgctgcgaggagatctgcatgtcgggcggcctcgtccgccagaagatgaagtacct 69058 Query: 202 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 261 |||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 69059 ccgcttcctccgcaagaggatgaacaccaagccgtctcacggccccattcacttccgtgc 69118 Query: 262 cccc 265 |||| Sbjct: 69119 cccc 69122
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 186 bits (94), Expect = 3e-44 Identities = 214/254 (84%) Strand = Plus / Plus Query: 59 gtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctg 118 |||||||| |||||||||||||||||||| ||||| |||| || | |||||||| ||| Sbjct: 85 gtggtggacgcgcgccaccacatgctgggccgcctgtcgtccattattgccaaggaactg 144 Query: 119 ctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctg 178 ||||| |||||| ||||| || || || ||||||||||| || || || || ||||| Sbjct: 145 ctcaatgggcagaaggtggtcgtcgtccgctgcgaggagatctgtatgtcgggtgggctc 204 Query: 179 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcg 238 || || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 205 gtacgccagaagatgaagtacctccgctttctccgcaagcggatgaacaccaagccatcc 264 Query: 239 cacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatg 298 || || |||||||||||||||||||| || || || | ||||||||| | ||||| ||| Sbjct: 265 catgggcccatccacttccgcgccccgtccaagatcctgtggcgcaccatccgcgggatg 324 Query: 299 atcccgcacaagac 312 || ||||||||||| Sbjct: 325 attccgcacaagac 338
>gb|DQ099054.1| Arachis stenosperma clone AS1RN3B12 microsatellite sequence Length = 758 Score = 121 bits (61), Expect = 2e-24 Identities = 208/257 (80%) Strand = Plus / Minus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| || | ||||||||||| || || || |||||||| ||||| |||||| Sbjct: 641 gtggtggtggacgcaaggcaccacatgcttggtcgtctggcgtcgatagtggcgaaggag 582 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || ||||| || ||| || ||||||||| ||||||||||||| ||||| ||||| ||| Sbjct: 581 cttctcaatggtcagaaggttgtggtggttaggtgcgaggagatctgcatttccggtggg 522 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || || | ||||| |||||||| | | |||||||| ||| |||||||||| ||||| Sbjct: 521 ctcgtgagacagaaaatgaagtatatgaggttcctccgtaagaggatgaacactaagccc 462 Query: 236 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 295 || || ||||||||||| ||||| || || || || || |||||||||||||| || || Sbjct: 461 tctcatggtcccatccatttccgtgctccttctaagatcttctggcgcaccgttcgaggt 402 Query: 296 atgatcccgcacaagac 312 ||||| || |||||||| Sbjct: 401 atgataccacacaagac 385
>gb|AF521144.1| Kandelia candel 60S ribosomal protein mRNA, partial cds Length = 236 Score = 119 bits (60), Expect = 6e-24 Identities = 174/212 (82%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||||||||| |||||||||||||||||||| | || |||||||| | ||||| ||| Sbjct: 13 gtggtggtggacgcgcgccaccacatgctggggaggctcgcgtcgataatagccaaagag 72 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 ||||| ||||| ||| ||||||||||| ||||||| ||||| ||| | || || || Sbjct: 73 ctgctgaacggtcagaaagtggtggtggtgaggtgcgaagagatatgcttgtcgggaggc 132 Query: 176 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 235 || || | ||||||||||||||||| | ||||| ||||| || |||||||||||||| Sbjct: 133 cttgtgaggcagaagatgaagtacctgaggttccttcgcaaacgcatgaacaccaagcct 192 Query: 236 tcgcacggtcccatccacttccgcgccccctc 267 || ||||| |||||||| |||||||| ||||| Sbjct: 193 tctcacggacccatccatttccgcgctccctc 224
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 23 atggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacatg 82 ||||||||||||||||| |||| ||||| ||||| |||||||| ||||||||||||||| Sbjct: 1 atggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatg 60 Query: 83 ctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtg 139 || | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||| Sbjct: 61 ctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtg 117 Score = 99.6 bits (50), Expect = 6e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 219 ggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttct 278 |||||||||||||||| || || || ||||||||||||||| ||||| | || || ||| Sbjct: 119 ggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctct 178 Query: 279 ggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||| ||||||||||||||||||||||| Sbjct: 179 ggcgcaccgtccgcggcatgatcccgcacaagac 212
>ref|NM_111591.2| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.1 mRNA, complete cds Length = 881 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 95 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 154 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 155 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 214 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 215 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 274 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 275 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 334 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 335 ggtatgattccacacaagac 354
>ref|NM_001035577.1| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.2 mRNA, complete cds Length = 893 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 104 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 163 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 164 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 223 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 224 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 283 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 284 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 343 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 344 ggtatgattccacacaagac 363
>gb|AY114589.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110) mRNA, complete cds Length = 667 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 31 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 90 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 91 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 150 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 151 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 210 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 211 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 270 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 271 ggtatgattccacacaagac 290
>gb|AY062793.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110; T1B9.24) mRNA, complete cds Length = 811 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 94 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 153 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 154 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 213 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 214 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 273 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 274 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 333 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 334 ggtatgattccacacaagac 353
>gb|AY057551.1| Arabidopsis thaliana AT3g07110/T1B9_24 mRNA, complete cds Length = 831 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 94 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 153 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 154 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 213 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 214 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 273 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 274 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 333 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 334 ggtatgattccacacaagac 353
>gb|AF325041.2|AF325041 Arabidopsis thaliana AT3g07110 (AT3g07110/T1B9_24) mRNA, complete cds Length = 829 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 94 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 153 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 154 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 213 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 214 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 273 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 274 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 333 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 334 ggtatgattccacacaagac 353
>emb|BX822336.1|CNS0A5ZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 788 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 78 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 137 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 138 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 197 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 198 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 257 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 258 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 317 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 318 ggtatgattccacacaagac 337
>emb|BX824368.1|CNS0A5OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 103 bits (52), Expect = 4e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 72 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 131 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 132 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 191 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 192 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 251 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 252 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 311 Query: 293 ggcatgatcccgcacaagac 312 || ||||| || |||||||| Sbjct: 312 ggtatgattccacacaagac 331
>emb|BX822519.1|CNS0A5UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 95.6 bits (48), Expect = 9e-17 Identities = 144/176 (81%) Strand = Plus / Plus Query: 137 gtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaag 196 ||||| || |||||||||||||| || |||||||||| || || ||||||||||||||| Sbjct: 140 gtggttgtccggtgcgaggagatttgtctctccggcggacttgttcgtcagaagatgaag 199 Query: 197 tacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttc 256 ||| | | || ||||| ||||| |||||||| || || || ||||| || || |||||| Sbjct: 200 tacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcacttc 259 Query: 257 cgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 || || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 260 cgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 315
>emb|BX822098.1|CNS0A5TD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 95.6 bits (48), Expect = 9e-17 Identities = 144/176 (81%) Strand = Plus / Plus Query: 137 gtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaag 196 ||||| || |||||||||||||| || |||||||||| || || ||||||||||||||| Sbjct: 30 gtggttgtccggtgcgaggagatttgtctctccggcggacttgttcgtcagaagatgaag 89 Query: 197 tacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttc 256 ||| | | || ||||| ||||| |||||||| || || || ||||| || || |||||| Sbjct: 90 tacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcacttc 149 Query: 257 cgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 || || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 150 cgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 205
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 91.7 bits (46), Expect = 1e-15 Identities = 193/242 (79%) Strand = Plus / Minus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 82661 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 82602 Query: 113 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 172 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 82601 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 82542 Query: 173 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 232 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 82541 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 82482 Query: 233 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 292 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 82481 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 82422 Query: 293 gg 294 || Sbjct: 82421 gg 82420
>gb|AF051212.1|AF051212 Picea mariana probable 60s ribosomal protein L13a (Sb16) mRNA, complete cds Length = 918 Score = 87.7 bits (44), Expect = 2e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 115 ||||| ||||||||||||||||||||||| || ||||| || || ||| ||||||||||| Sbjct: 84 gtggttgtggatgcgcgccaccacatgcttggccgcctcgcctctatcttggccaaggag 143 Query: 116 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 175 || ||| | || ||||| ||||| ||||| || || || ||||| ||||| || || || Sbjct: 144 cttctccatggccagcgagtggttgtggtgcgttgtgaagagatatgcatgtctggtgga 203 Query: 176 ctggtccgtcagaagatgaa 195 || || |||||||||||||| Sbjct: 204 cttgttcgtcagaagatgaa 223
>ref|NM_124253.2| Arabidopsis thaliana structural constituent of ribosome AT5G48760 mRNA, complete cds Length = 834 Score = 67.9 bits (34), Expect = 2e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 68 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 127 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 82 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 141 Query: 128 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 187 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 142 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 201 Query: 188 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 247 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 202 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 261 Query: 248 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 307 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 262 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 321 Query: 308 aagacg 313 |||||| Sbjct: 322 aagacg 327
>gb|AY090359.1| Arabidopsis thaliana AT5g48760/K24G6_9 mRNA, complete cds Length = 677 Score = 67.9 bits (34), Expect = 2e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 68 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 127 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 75 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 134 Query: 128 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 187 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 135 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 194 Query: 188 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 247 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 195 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 254 Query: 248 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 307 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 255 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 314 Query: 308 aagacg 313 |||||| Sbjct: 315 aagacg 320
>gb|AY088191.1| Arabidopsis thaliana clone 4275 mRNA, complete sequence Length = 814 Score = 67.9 bits (34), Expect = 2e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 68 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 127 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 75 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 134 Query: 128 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 187 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 135 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 194 Query: 188 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 247 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 195 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 254 Query: 248 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 307 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 255 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 314 Query: 308 aagacg 313 |||||| Sbjct: 315 aagacg 320
>gb|AY122902.1| Arabidopsis thaliana At5g48760/K24G6_9 mRNA, complete cds Length = 621 Score = 67.9 bits (34), Expect = 2e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 68 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 127 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 46 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 105 Query: 128 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 187 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 106 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 165 Query: 188 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 247 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 166 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 225 Query: 248 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 307 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 226 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 285 Query: 308 aagacg 313 |||||| Sbjct: 286 aagacg 291
>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239, complete sequence Length = 106506 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 56 gtggtggtggatgcgcgccaccacatgctgggacgcct 93 ||||||||||||||||||||||||||| |||| ||||| Sbjct: 83567 gtggtggtggatgcgcgccaccacatgttgggtcgcct 83604
>emb|AJ223363.1|LLAJ3363 Lupinus luteus mRNA for ribosomal protein L13a Length = 766 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 53 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 112 |||||||| || || ||||||||||||||||| || || ||||| || |||||||| ||| Sbjct: 57 cgcgtggtagtcgacgcgcgccaccacatgcttggtcgtcttgcttcaatcgtggcaaag 116 Query: 113 gagct 117 ||||| Sbjct: 117 gagct 121
>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205952 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 94900 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 94939
>ref|XM_944672.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648462), mRNA Length = 1590 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154
>ref|XM_944670.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648462), mRNA Length = 1547 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1040 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1079
>ref|XM_940589.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648462), mRNA Length = 1642 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154
>ref|XM_944666.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648462), mRNA Length = 1542 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154
>ref|XM_933780.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC441632), mRNA Length = 1589 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153
>ref|XM_497335.2| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC441632), mRNA Length = 1546 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1039 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1078
>ref|XM_929566.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC441632), mRNA Length = 1641 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153
>ref|XM_933775.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA Length = 1541 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153
>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 162200 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 ||||||||||| |||||||||||||||||||||||||| Sbjct: 94438 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 94399
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 56.0 bits (28), Expect = 8e-05 Identities = 106/132 (80%) Strand = Plus / Minus Query: 68 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 127 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 27678 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 27619 Query: 128 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 187 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 27618 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 27559 Query: 188 aagatgaagtac 199 || ||||||||| Sbjct: 27558 aaaatgaagtac 27547
>emb|AJ388525.1|CFA388525 Canis familiaris mRNA for partial Ribosomal protein L13A (rpL13 gene) Length = 427 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 205 cttcctccgcaagcggatgaacaccaa 231 ||||||||||||||||||||||||||| Sbjct: 166 cttcctccgcaagcggatgaacaccaa 192
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 40 ttcctccgcaagcggatgaacaccaa 65
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 757 ttcctccgcaagcggatgaacaccaa 782
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 316 ttcctccgcaagcggatgaacaccaa 341
>ref|XM_512656.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456029), mRNA Length = 570 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 90 ttcctccgcaagcggatgaacaccaa 115
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaa 217
>ref|XM_509803.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452746), mRNA Length = 713 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 197 ttcctccgcaagcggatgaacaccaa 222
>ref|XM_508036.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC450737), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 196 ttcctccgcaagcggatgaacaccaa 221
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 169 ttcctccgcaagcggatgaacaccaa 194
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 179 ttcctccgcaagcggatgaacaccaa 204
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 174 ttcctccgcaagcggatgaacaccaa 199
>gb|AC146032.2| Pan troglodytes BAC clone RP43-14B10 from 7, complete sequence Length = 181694 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 30189 ttcctccgcaagcggatgaacaccaa 30164
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 167 ttcctccgcaagcggatgaacaccaa 192
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 165 ttcctccgcaagcggatgaacaccaa 190
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 840 ttcctccgcaagcggatgaacaccaa 865
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 2045 ttcctccgcaagcggatgaacaccaa 2070
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 50271 tgaagtacctgggctttctccgcaagcggatgaacacc 50308
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 56692 tgaagtacctgggctttctccgcaagcggatgaacacc 56729
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 33564 tgaagtacctgggctttctccgcaagcggatgaacacc 33601
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 81036 ttcctccgcaagcggatgaacaccaa 81061
>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3' end of the PDCD4 gene for programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047), a novel gene (LOC92482), the SHOC2 gene for soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic, alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR, ZNF32, ADRA2R) and two CpG islands, complete sequence Length = 204908 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 54593 ttcctccgcaagcggatgaacaccaa 54568
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacaccaa 211
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 28590 tgaagtacctgggctttctccgcaagcggatgaacacc 28627
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 5416 tgaagtacctgggctttctccgcaagcggatgaacacc 5453
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 53975 tgaagtacctgggctttctccgcaagcggatgaacacc 54012
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 643 ttcctccgcaagcggatgaacaccaa 668
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 147 ttcctccgcaagcggatgaacaccaa 172
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 677 ttcctccgcaagcggatgaacaccaa 702
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 155 ttcctccgcaagcggatgaacaccaa 180
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 77660 ttcctccgcaagcggatgaacaccaa 77685
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182
>ref|XM_931056.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC284821), mRNA Length = 1132 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 178 tgaagtacctgggtttcctccgcaagcggatgaacacc 215
>ref|XM_931051.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC284821), mRNA Length = 679 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 178 tgaagtacctgggtttcctccgcaagcggatgaacacc 215
>ref|XM_931046.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC284821), mRNA Length = 1050 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 96 tgaagtacctgggtttcctccgcaagcggatgaacacc 133
>ref|XM_931040.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC284821), mRNA Length = 1067 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 177 tgaagtacctgggtttcctccgcaagcggatgaacacc 214
>ref|XM_926157.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC284821), mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 177 tgaagtacctgggtttcctccgcaagcggatgaacacc 214
>ref|XM_945323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649250), mRNA Length = 655 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215
>ref|XM_941634.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649250), mRNA Length = 667 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215
>ref|XM_945318.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649250), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaacaccaa 210
>ref|XM_944191.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC648326), mRNA Length = 703 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 193 ttcctccgcaagcggatgaacaccaa 218
>ref|XM_944188.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648326), mRNA Length = 622 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 112 ttcctccgcaagcggatgaacaccaa 137
>ref|XM_944185.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648326), mRNA Length = 595 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 85 ttcctccgcaagcggatgaacaccaa 110
>ref|XM_944181.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648326), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 187 ttcctccgcaagcggatgaacaccaa 212
>ref|XM_939484.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648326), mRNA Length = 711 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 201 ttcctccgcaagcggatgaacaccaa 226
>ref|XM_930133.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC644511), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215
>ref|XM_934381.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC644511), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaacaccaa 210
>ref|XM_932924.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC283340), mRNA Length = 700 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 193 ttcctccgcaagcggatgaacaccaa 218
>ref|XM_932919.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA Length = 590 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 85 ttcctccgcaagcggatgaacaccaa 110
>ref|XM_932916.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC283340), mRNA Length = 610 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacaccaa 130
>ref|XM_208072.6| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC283340), mRNA Length = 708 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 201 ttcctccgcaagcggatgaacaccaa 226
>ref|XM_932910.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC283340), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 187 ttcctccgcaagcggatgaacaccaa 212
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 74632 tgaagtacctgggctttctccgcaagcggatgaacacc 74595
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 76592 tgaagtacctgggctttctccgcaagcggatgaacacc 76629
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaa 196
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 10861 ttcctccgcaagcggatgaacaccaa 10886
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaa 217
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaa 196
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 175 ttcctccgcaagcggatgaacaccaa 200
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 108023 tgaagtacctgggtttcctccgcaagcggatgaacacc 108060
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 24 ttcctccgcaagcggatgaacaccaa 49
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| |||| ||||||||||||||||||||| Sbjct: 78972 tgaagtacctgggctttctccgcaagcggatgaacacc 79009
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaa 197
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaa 197
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacacc 229 |||||||||| | |||||||||||||||||||||||| Sbjct: 44832 tgaagtacctgggtttcctccgcaagcggatgaacacc 44869
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||||||||||||||| Sbjct: 3669 ttcctccgcaagcggatgaacaccaa 3694
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 68752 ttcctccgcaagcggatgaacacca 68776
>emb|AL356120.10| Human DNA sequence from clone RP11-365K22 on chromosome 13 Contains a novel gene similar to ribosomal protein L13a (RPL13A), complete sequence Length = 83727 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 13610 ttcctccgcaagcggatgaacacca 13586
>emb|CR859183.1| Pongo pygmaeus mRNA; cDNA DKFZp469O181 (from clone DKFZp469O181) Length = 772 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacca 216
>ref|XR_000921.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNA Length = 590 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacacca 129
>ref|XR_000922.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 2 (LOC387930), misc RNA Length = 688 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 194 ttcctccgcaagcggatgaacacca 218
>ref|XR_000923.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 3 (LOC387930), misc RNA Length = 605 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacacca 210
>ref|XM_942899.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC642209), mRNA Length = 590 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacacca 129
>ref|XM_936630.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC642209), mRNA Length = 688 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 194 ttcctccgcaagcggatgaacacca 218
>ref|XM_942891.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC642209), mRNA Length = 605 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacca 230 ||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacacca 210
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 192 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 231 |||||||||| |||||||||||||| |||||||||||| Sbjct: 58387 tgaagtacctggtcttcctccgcaagcagatgaacaccaa 58426
>ref|XM_945533.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC649564), mRNA Length = 1112 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 170 ttcctccgcaagcggatgaacacc 193
>ref|XM_945532.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC649564), mRNA Length = 671 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215
>ref|XM_945529.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC649564), mRNA Length = 681 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215
>ref|XM_945527.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC649564), mRNA Length = 688 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215
>ref|XM_945523.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC649564), mRNA Length = 1052 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 110 ttcctccgcaagcggatgaacacc 133
>ref|XM_945522.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649564), mRNA Length = 1134 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215
>ref|XM_941896.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649564), mRNA Length = 668 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacacc 214
>ref|XM_945517.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649564), mRNA Length = 1067 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacacc 229 |||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacacc 214
>emb|Y09971.1|CPRPL13A C.paradoxa mRNA for ribosomal protein L13a Length = 710 Score = 46.1 bits (23), Expect = 0.077 Identities = 29/31 (93%) Strand = Plus / Plus Query: 293 ggcatgatcccgcacaagacgccccgcggcg 323 ||||||||||| |||||||| |||||||||| Sbjct: 269 ggcatgatcccccacaagaccccccgcggcg 299
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaa 231 ||||||||||||||||||||||| Sbjct: 195 ctccgcaagcggatgaacaccaa 217
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaa 231 ||||||||||||||||||||||| Sbjct: 980 ctccgcaagcggatgaacaccaa 1002
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Plus Query: 205 cttcctccgcaagcggatgaacaccaa 231 |||||||||||||| |||||||||||| Sbjct: 90261 cttcctccgcaagcagatgaacaccaa 90287
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaa 231 ||||||||||||||||||||||| Sbjct: 170 ctccgcaagcggatgaacaccaa 192
>ref|XM_520754.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465300), mRNA Length = 680 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaaca 212
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||| ||||||||||||||||||| Sbjct: 169 ttcctctgcaagcggatgaacaccaa 194
>ref|XM_866179.1| PREDICTED: Bos taurus similar to ribosomal protein L13a (LOC614617), mRNA Length = 911 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 210 tccgcaagcggatgaacaccaa 231 |||||||||||||||||||||| Sbjct: 308 tccgcaagcggatgaacaccaa 329
>gb|DQ084040.1| Oxyuranus scutellatus 60S ribosomal protein L13a mRNA, partial cds Length = 664 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||||||||||| ||||||||||| Sbjct: 118 ttcctccgcaagcgtatgaacaccaa 143
>ref|XR_002869.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) (LOC547166), mRNA Length = 631 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagacg 313 |||||||||||||| ||||| |||||| | || ||||||||| Sbjct: 235 attttctggcgcactgtgcgaggcatgctgccccacaagacg 276
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 131727 ttcctccgcaagcggatgaaca 131706
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||| ||||||||||||||||||| Sbjct: 101 ttcctcggcaagcggatgaacaccaa 126
>gb|AC093286.3| Homo sapiens chromosome 5 clone RP11-456A14, complete sequence Length = 145047 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaacaccaa 231 ||||||| |||||||||||||||||| Sbjct: 9206 ttcctccacaagcggatgaacaccaa 9181
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||| ||||||||||||||||||||| Sbjct: 59816 ttcccccgcaagcggatgaacaccaa 59841
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||| ||||||||||||||||||| Sbjct: 100 ttcctcggcaagcggatgaacaccaa 125
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||| ||||||||||||||||||| Sbjct: 100 ttcctcggcaagcggatgaacaccaa 125
>ref|XM_945137.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 14 (LOC387841), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaaca 206
>ref|XM_945135.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 13 (LOC387841), mRNA Length = 1053 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaaca 212
>ref|XM_945132.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 12 (LOC387841), mRNA Length = 1054 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaaca 213
>ref|XM_945129.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 11 (LOC387841), mRNA Length = 1831 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 969 ttcctccgcaagcggatgaaca 990
>ref|XM_941323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC387841), mRNA Length = 1899 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 1037 ttcctccgcaagcggatgaaca 1058
>ref|XM_945122.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 10 (LOC387841), mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 1037 ttcctccgcaagcggatgaaca 1058
>ref|XM_932701.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC387841), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaaca 206
>ref|XM_932698.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC387841), mRNA Length = 1053 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaaca 212
>ref|XM_932693.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC387841), mRNA Length = 1054 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaaca 213
>ref|XM_932689.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC387841), mRNA Length = 1831 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 969 ttcctccgcaagcggatgaaca 990
>ref|XM_370681.3| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC387841), mRNA Length = 1899 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 1037 ttcctccgcaagcggatgaaca 1058
>ref|XM_932682.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC387841), mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ttcctccgcaagcggatgaaca 227 |||||||||||||||||||||| Sbjct: 1037 ttcctccgcaagcggatgaaca 1058
>gb|AC020899.6| Homo sapiens chromosome 5 clone CTC-484M2, complete sequence Length = 164286 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaacaccaa 231 ||||||| |||||||||||||||||| Sbjct: 143483 ttcctccacaagcggatgaacaccaa 143458
>emb|AL512597.11| Mouse DNA sequence from clone RP23-132G2 on chromosome X, complete sequence Length = 174367 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Minus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagacg 313 |||||||||||||| ||||| |||||| | || ||||||||| Sbjct: 79329 attttctggcgcactgtgcgaggcatgctgccccacaagacg 79288
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 206 ttcctccgcaagcggatgaacaccaa 231 |||||| ||||||||||||||||||| Sbjct: 125285 ttcctcggcaagcggatgaacaccaa 125260
>gb|BC086382.1| Rattus norvegicus ribosomal protein L13A, mRNA (cDNA clone MGC:105295 IMAGE:7301486), complete cds Length = 690 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 249 attttttggcgcactgtgcgaggcatgctgccgcacaagac 289 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaagccgtc 237 ||||| ||||||||||||||||| ||||| Sbjct: 186 ctccgaaagcggatgaacaccaacccgtc 214
>ref|NM_173340.2| Rattus norvegicus ribosomal protein L13A (Rpl13a), mRNA Length = 690 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 249 attttttggcgcactgtgcgaggcatgctgccgcacaagac 289 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaagccgtc 237 ||||| ||||||||||||||||| ||||| Sbjct: 186 ctccgaaagcggatgaacaccaacccgtc 214
>gb|BC082289.1| Mus musculus ribosomal protein L13a, mRNA (cDNA clone MGC:102485 IMAGE:6486177), complete cds Length = 658 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 242 attttctggcgcactgtgcgaggcatgctgccccacaagac 282
>ref|NM_009438.3| Mus musculus ribosomal protein L13a (Rpl13a), mRNA Length = 803 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 256 attttctggcgcactgtgcgaggcatgctgccccacaagac 296
>emb|CT010169.1| Mus musculus full open reading frame cDNA clone RZPDo836A1250D for gene Rpl13a, Ribosomal protein L13a; complete cds, incl. stopcodon Length = 612 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 235 attttctggcgcactgtgcgaggcatgctgccccacaagac 275
>gb|BC093376.1| Rattus norvegicus cDNA clone IMAGE:7387955, **** WARNING: chimeric clone **** Length = 1502 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 1070 attttttggcgcactgtgcgaggcatgctgccgcacaagac 1110 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaagccgtc 237 ||||| ||||||||||||||||| ||||| Sbjct: 1007 ctccgaaagcggatgaacaccaacccgtc 1035
>emb|X68282.1|RNRPL13A R.norvegicus mRNA for ribosomal protein L13a Length = 653 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 250 attttttggcgcactgtgcgaggcatgctgccgcacaagac 290 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaagccgtc 237 ||||| ||||||||||||||||| ||||| Sbjct: 187 ctccgaaagcggatgaacaccaacccgtc 215
>gb|BC086896.1| Mus musculus ribosomal protein L13a, mRNA (cDNA clone MGC:107571 IMAGE:6776320), complete cds Length = 676 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 258 attttctggcgcactgtgcgaggcatgctgccccacaagac 298
>emb|AL592222.11| Mouse DNA sequence from clone RP23-366M19 on chromosome 11 Contains a ribosomal protein L13a (Rpl13a) pseudogene, the 5' end of a novel gene, the gene for peptidyl-tRNA hydrolase 2, mitochondrial precursor (PTH2), the Cltc gene for clathrin heavy polypeptide (Hc) and the 3' end of the Dhx40 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 40, complete sequence Length = 160796 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 5606 attttctggcgcactgtgcgaggcatgctgccccacaagac 5566
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cgtgcgcggcatgatcccgca 306 ||||||||||||||||||||| Sbjct: 98173 cgtgcgcggcatgatcccgca 98193
>dbj|AK146318.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730051F21 product:ribosomal protein L13a, full insert sequence Length = 1016 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 258 attttctggcgcactgtgcgaggcatgctgccccacaagac 298
>gb|U73859.1|RNU73859 Rattus norvegicus hexokinase type III mRNA, complete cds Length = 3692 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 3273 attttttggcgcactgtgcgaggcatgctgccgcacaagac 3313 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ctccgcaagcggatgaacaccaagccgtc 237 ||||| ||||||||||||||||| ||||| Sbjct: 3210 ctccgaaagcggatgaacaccaacccgtc 3238
>dbj|AK156035.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830005C02 product:ribosomal protein L13a, full insert sequence Length = 658 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 258 attttctggcgcactgtgcgaggcatgctgccccacaagac 298
>dbj|AK168903.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920063P05 product:ribosomal protein L13a, full insert sequence Length = 658 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 258 attttctggcgcactgtgcgaggcatgctgccccacaagac 298
>dbj|AK159882.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420036H07 product:ribosomal protein L13a, full insert sequence Length = 656 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 256 attttctggcgcactgtgcgaggcatgctgccccacaagac 296
>dbj|AK168784.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920055C13 product:ribosomal protein L13a, full insert sequence Length = 658 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 258 attttctggcgcactgtgcgaggcatgctgccccacaagac 298
>dbj|AK170030.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630010M18 product:ribosomal protein L13a, full insert sequence Length = 934 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 259 attttctggcgcactgtgcgaggcatgctgccccacaagac 299
>dbj|AK077512.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730433A16 product:ribosomal protein L13a, full insert sequence Length = 1016 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 258 attttctggcgcactgtgcgaggcatgctgccccacaagac 298
>dbj|AK007609.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810026N22 product:ribosomal protein L13a, full insert sequence Length = 803 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 256 attttctggcgcactgtgcgaggcatgctgccccacaagac 296
>gb|BC065799.1| Mus musculus ribosomal protein L13a, mRNA (cDNA clone IMAGE:574251) Length = 1267 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 attttctggcgcaccgtgcgcggcatgatcccgcacaagac 312 |||||||||||||| ||||| |||||| | || |||||||| Sbjct: 658 attttctggcgcactgtgcgaggcatgctgccccacaagac 698
>emb|BX931917.1| Gallus gallus finished cDNA, clone ChEST790c21 Length = 758 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cttcctccgcaagcggatgaacaccaagccgtc 237 |||||| || ||||||||||||||||| ||||| Sbjct: 183 cttcctgcggaagcggatgaacaccaacccgtc 215
>ref|NM_117386.3| Arabidopsis thaliana structural constituent of ribosome AT4G13170 mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 4.8 Identities = 74/92 (80%) Strand = Plus / Plus Query: 221 atgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctgg 280 |||||||| ||||| || || ||||| || ||||| || || || || || || |||||| Sbjct: 222 atgaacactaagccttctcatggtcctattcactttcgtgctccttccaagatcttctgg 281 Query: 281 cgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| || ||||| ||||| || |||||||| Sbjct: 282 cgcactgttcgcgggatgattccacacaagac 313
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 40.1 bits (20), Expect = 4.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 219 ggatgaacaccaagccgtcgcacggtcccatccacttccg 258 ||||||||||||| || |||| |||||| |||||||||| Sbjct: 186 ggatgaacaccaacccctcgcggggtcccttccacttccg 225
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ggatgcgcgccaccacatgctggg 87 |||||||||||| ||||||||||| Sbjct: 421750 ggatgcgcgccagcacatgctggg 421727
>gb|AE011661.1| Xanthomonas axonopodis pv. citri str. 306, section 39 of 469 of the complete genome Length = 11012 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ggatgcgcgccaccacatgctggg 87 |||||||||||| ||||||||||| Sbjct: 7274 ggatgcgcgccagcacatgctggg 7251
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 cttcctccgcaagcggatgaacac 228 |||| ||||||||||||||||||| Sbjct: 206657 cttcttccgcaagcggatgaacac 206680
>gb|AY060518.1| Arabidopsis thaliana AT4g13170/F17N18_60 mRNA, complete cds Length = 621 Score = 40.1 bits (20), Expect = 4.8 Identities = 74/92 (80%) Strand = Plus / Plus Query: 221 atgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctgg 280 |||||||| ||||| || || ||||| || ||||| || || || || || || |||||| Sbjct: 199 atgaacactaagccttctcatggtcctattcactttcgtgctccttccaagatcttctgg 258 Query: 281 cgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| || ||||| ||||| || |||||||| Sbjct: 259 cgcactgttcgcgggatgattccacacaagac 290
>gb|AY052263.1| Arabidopsis thaliana AT4g13170/F17N18_60 mRNA, complete cds Length = 828 Score = 40.1 bits (20), Expect = 4.8 Identities = 74/92 (80%) Strand = Plus / Plus Query: 221 atgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctgg 280 |||||||| ||||| || || ||||| || ||||| || || || || || || |||||| Sbjct: 220 atgaacactaagccttctcatggtcctattcactttcgtgctccttccaagatcttctgg 279 Query: 281 cgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| || ||||| ||||| || |||||||| Sbjct: 280 cgcactgttcgcgggatgattccacacaagac 311
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgccccgcggcgaggctgcg 331 |||||||||||||||||||| Sbjct: 17522606 cgccccgcggcgaggctgcg 17522625
>emb|BX828350.1|CNS0A3Y6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 821 Score = 40.1 bits (20), Expect = 4.8 Identities = 74/92 (80%) Strand = Plus / Plus Query: 221 atgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctgg 280 |||||||| ||||| || || ||||| || ||||| || || || || || || |||||| Sbjct: 214 atgaacactaagccttctcatggtcctattcactttcgtgctccttccaagatcttctgg 273 Query: 281 cgcaccgtgcgcggcatgatcccgcacaagac 312 ||||| || ||||| ||||| || |||||||| Sbjct: 274 cgcactgttcgcgggatgattccacacaagac 305
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgccccgcggcgaggctgcg 331 |||||||||||||||||||| Sbjct: 153647 cgccccgcggcgaggctgcg 153666
>dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075M17 Length = 91422 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgccccgcggcgaggctgcg 331 |||||||||||||||||||| Sbjct: 27052 cgccccgcggcgaggctgcg 27071
>dbj|AB049716.1| Pisum sativum ssa-6 mRNA for putative senescence-associated protein, complete cds Length = 918 Score = 40.1 bits (20), Expect = 4.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 74 caccacatgctgggacgccttgcgtcgatcgtggccaaggagct 117 ||||||||||| || || ||||| || ||||| ||||||||||| Sbjct: 46 caccacatgctcggccgtcttgcctccatcgtcgccaaggagct 89 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,349,580 Number of Sequences: 3902068 Number of extensions: 2349580 Number of successful extensions: 37210 Number of sequences better than 10.0: 228 Number of HSP's better than 10.0 without gapping: 227 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 36760 Number of HSP's gapped (non-prelim): 426 length of query: 358 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 336 effective length of database: 17,147,199,772 effective search space: 5761459123392 effective search space used: 5761459123392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
