Clone Name | basdk19 |
---|---|
Clone Library Name | barley_pub |
>gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, complete cds Length = 768 Score = 1025 bits (517), Expect = 0.0 Identities = 520/521 (99%) Strand = Plus / Plus Query: 9 actccacctaccagccggcctcttcccaccgcccccaaattctaccgagcagctcagccg 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 actccacctaccagccggcctcttcccaccgcccccaaattctaccgagcagctcagccg 73 Query: 69 gccaacccatggcgcactgcctcgccgccgtttcctccttctcgccgtccgccgtccgcc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 gccaacccatggcgcactgcctcgccgccgtttcctccttctcgccgtccgccgtccgcc 133 Query: 129 ggcggctgtccagccaggtggctaatgtagtttcgagccggagctcagtttctttccata 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ggcggctgtccagccaggtggctaatgtagtttcgagccggagctcagtttctttccata 193 Query: 189 gccggcagatgagctttgtatccatcagttcaagaccgagttcgcttcggtttaagattt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gccggcagatgagctttgtatccatcagttcaagaccgagttcgcttcggtttaagattt 253 Query: 249 gttgtgtggccatgggagaggcacaggccaagaaagagacagtcgacaaggtttgtatga 308 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 gttgtgcggccatgggagaggcacaggccaagaaagagacagtcgacaaggtttgtatga 313 Query: 309 tagtcaagaagcagctggcagtccctgatggtacacctgtcacagcggagtcgaaattct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 tagtcaagaagcagctggcagtccctgatggtacacctgtcacagcggagtcgaaattct 373 Query: 369 ccgaacttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagt 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 ccgaacttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagt 433 Query: 429 tcaacatcactgttgatgaaacaagcgcgcaggacattgcaaccgtgcaggatgcagcga 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 tcaacatcactgttgatgaaacaagcgcgcaggacattgcaaccgtgcaggatgcagcga 493 Query: 489 accttatcgagaagcttgtgacagagaagaccgcataagcg 529 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 accttatcgagaagcttgtgacagagaagaccgcataagcg 534
>gb|M58753.1|BLYACL1 Hordeum vulgare acyl carrier protein I (Acl1) gene, complete cds Length = 3822 Score = 285 bits (144), Expect = 7e-74 Identities = 144/144 (100%) Strand = Plus / Plus Query: 256 ggccatgggagaggcacaggccaagaaagagacagtcgacaaggtttgtatgatagtcaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2578 ggccatgggagaggcacaggccaagaaagagacagtcgacaaggtttgtatgatagtcaa 2637 Query: 316 gaagcagctggcagtccctgatggtacacctgtcacagcggagtcgaaattctccgaact 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2638 gaagcagctggcagtccctgatggtacacctgtcacagcggagtcgaaattctccgaact 2697 Query: 376 tggtgccgactcactagacacggt 399 |||||||||||||||||||||||| Sbjct: 2698 tggtgccgactcactagacacggt 2721 Score = 276 bits (139), Expect = 7e-71 Identities = 139/139 (100%) Strand = Plus / Plus Query: 9 actccacctaccagccggcctcttcccaccgcccccaaattctaccgagcagctcagccg 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 actccacctaccagccggcctcttcccaccgcccccaaattctaccgagcagctcagccg 739 Query: 69 gccaacccatggcgcactgcctcgccgccgtttcctccttctcgccgtccgccgtccgcc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 gccaacccatggcgcactgcctcgccgccgtttcctccttctcgccgtccgccgtccgcc 799 Query: 129 ggcggctgtccagccaggt 147 ||||||||||||||||||| Sbjct: 800 ggcggctgtccagccaggt 818 Score = 264 bits (133), Expect = 3e-67 Identities = 133/133 (100%) Strand = Plus / Plus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2805 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 2864 Query: 457 gcaggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagcttgtgacagagaa 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2865 gcaggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagcttgtgacagagaa 2924 Query: 517 gaccgcataagcg 529 ||||||||||||| Sbjct: 2925 gaccgcataagcg 2937 Score = 222 bits (112), Expect = 9e-55 Identities = 112/112 (100%) Strand = Plus / Plus Query: 143 caggtggctaatgtagtttcgagccggagctcagtttctttccatagccggcagatgagc 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1897 caggtggctaatgtagtttcgagccggagctcagtttctttccatagccggcagatgagc 1956 Query: 203 tttgtatccatcagttcaagaccgagttcgcttcggtttaagatttgttgtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1957 tttgtatccatcagttcaagaccgagttcgcttcggtttaagatttgttgtg 2008
>dbj|AK120370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J18, full insert sequence Length = 826 Score = 188 bits (95), Expect = 1e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 278 aagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtccctgat 337 |||||||||||||||||||||||||| | ||||| |||| ||||||||| ||||||| Sbjct: 273 aagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactccctgag 332 Query: 338 ggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcactagacacg 397 || || ||||||| | || || |||||||| ||||| ||||| || ||||| || ||| Sbjct: 333 ggaactgctgtcactggtgaatcaaaattctctgaactcggtgctgattcactggatacg 392 Query: 398 gttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgcg 457 |||||||||||||||||||||||||| || |||||||||||||| || |||||||| ||| Sbjct: 393 gttgagattgtgatgggcctcgaggaggaattcaacatcactgtcgacgaaacaagtgcg 452 Query: 458 caggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 |||||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 453 caggacatcgcaactgttcaagatgcagcaaacctgatcgagaagct 499 Score = 79.8 bits (40), Expect = 8e-12 Identities = 93/110 (84%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 74 cccatggcgcactgcctcgccgccgtttcctc---cttctcgccgtccgccgtccgccgg 130 ||||||||||||| ||||||||||| |||| |||||||||| |||||| |||||| Sbjct: 84 cccatggcgcactccctcgccgccgccgcctcgtccttctcgccgcccgccgcacgccgg 143 Query: 131 cggctgtccagccaggtggctaatgtagtttcgagccggagctcagtttc 180 || ||| || | |||||| |||||||| ||||||| |||||||||||||| Sbjct: 144 cgactgcccggacaggtgactaatgtaatttcgagacggagctcagtttc 193
>dbj|AK060472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E08, full insert sequence Length = 820 Score = 188 bits (95), Expect = 1e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 278 aagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtccctgat 337 |||||||||||||||||||||||||| | ||||| |||| ||||||||| ||||||| Sbjct: 260 aagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactccctgag 319 Query: 338 ggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcactagacacg 397 || || ||||||| | || || |||||||| ||||| ||||| || ||||| || ||| Sbjct: 320 ggaactgctgtcactggtgaatcaaaattctctgaactcggtgctgattcactggatacg 379 Query: 398 gttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgcg 457 |||||||||||||||||||||||||| || |||||||||||||| || |||||||| ||| Sbjct: 380 gttgagattgtgatgggcctcgaggaggaattcaacatcactgtcgacgaaacaagtgcg 439 Query: 458 caggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 |||||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 440 caggacatcgcaactgttcaagatgcagcaaacctgatcgagaagct 486 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/109 (83%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 74 cccatggcgcactgcctcgccgccgtttcctccttct--cgccgtccgccgtccgccggc 131 ||||||||||||| ||||||||||| |||| | || ||||| |||||| ||||||| Sbjct: 72 cccatggcgcactccctcgccgccgccgcctcgtcctttcgccgcccgccgcacgccggc 131 Query: 132 ggctgtccagccaggtggctaatgtagtttcgagccggagctcagtttc 180 | ||| || | |||||| |||||||| ||||||| |||||||||||||| Sbjct: 132 gactgcccggacaggtgactaatgtaatttcgagacggagctcagtttc 180
>gb|AY110717.1| Zea mays CL8824_1 mRNA sequence Length = 900 Score = 141 bits (71), Expect = 3e-30 Identities = 188/227 (82%) Strand = Plus / Minus Query: 278 aagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtccctgat 337 ||||| ||||||||||||||||| |||| ||||| ||| |||||||||| | || ||| Sbjct: 619 aagaaggagacagtcgacaaggtctgtagtatagtgaaggagcagctggctcttcccgat 560 Query: 338 ggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcactagacacg 397 || || || |||| | || || |||||| ||||||||||||| || ||||| || ||| Sbjct: 559 gggactgctatcactggtgaatcaaaattcgccgaacttggtgctgattcactggatacg 500 Query: 398 gttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgcg 457 |||||||||||||||||||||||||| | ||||||||| || || || ||||||||||| Sbjct: 499 gttgagattgtgatgggcctcgaggaggcgttcaacataaccgtcgacgaaacaagcgca 440 Query: 458 caggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 |||||||| || || |||||||| || || |||| ||||||||||| Sbjct: 439 caggacatcgcgacggtgcaggacgctgcagacctcatcgagaagct 393 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 159 tttcgagccggagctcagtttctttccatagccggcagatgagctttgtatccatcagtt 218 |||| ||||||||||| ||||| ||||| |||| ||||| | |||||||||| ||| Sbjct: 720 tttcaagccggagctcggtttccttccagagccacaggatgacttctgtatccatccgtt 661 Query: 219 caagaccgagttcgcttcggtttaagatttg 249 ||||||| ||||| |||||||| |||||||| Sbjct: 660 caagaccaagttctcttcggttcaagatttg 630
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 4e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 ||||||||||||||||||||||||||| || |||||||||||||| || |||||||| || Sbjct: 21276720 ggttgagattgtgatgggcctcgaggaggaattcaacatcactgtcgacgaaacaagtgc 21276661 Query: 457 gcaggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 ||||||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 21276660 gcaggacatcgcaactgttcaagatgcagcaaacctgatcgagaagct 21276613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 272 caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 331 ||||| |||||||||||||||||||||||||| | ||||| |||| ||||||||| || Sbjct: 21276923 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 21276864 Query: 332 cctgatggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcacta 391 ||||| || || ||||||| | || || |||||||| ||||| ||||| || ||||| Sbjct: 21276863 cctgagggaactgctgtcactggtgaatcaaaattctctgaactcggtgctgattcactg 21276804 Query: 392 gacacggt 399 || ||||| Sbjct: 21276803 gatacggt 21276796 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 143 caggtggctaatgtagtttcgagccggagctcagtttc 180 |||||| |||||||| ||||||| |||||||||||||| Sbjct: 21277538 caggtgactaatgtaatttcgagacggagctcagtttc 21277501 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 cccatggcgcactgcctcgccgccg 98 ||||||||||||| ||||||||||| Sbjct: 21279191 cccatggcgcactccctcgccgccg 21279167 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tctcgccgtccgccgtccgc 127 |||||||||||||||||||| Sbjct: 14550416 tctcgccgtccgccgtccgc 14550435
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 4e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 ||||||||||||||||||||||||||| || |||||||||||||| || |||||||| || Sbjct: 21202939 ggttgagattgtgatgggcctcgaggaggaattcaacatcactgtcgacgaaacaagtgc 21202880 Query: 457 gcaggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 ||||||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 21202879 gcaggacatcgcaactgttcaagatgcagcaaacctgatcgagaagct 21202832 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 272 caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 331 ||||| |||||||||||||||||||||||||| | ||||| |||| ||||||||| || Sbjct: 21203142 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 21203083 Query: 332 cctgatggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcacta 391 ||||| || || ||||||| | || || |||||||| ||||| ||||| || ||||| Sbjct: 21203082 cctgagggaactgctgtcactggtgaatcaaaattctctgaactcggtgctgattcactg 21203023 Query: 392 gacacggt 399 || ||||| Sbjct: 21203022 gatacggt 21203015 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 143 caggtggctaatgtagtttcgagccggagctcagtttc 180 |||||| |||||||| ||||||| |||||||||||||| Sbjct: 21203757 caggtgactaatgtaatttcgagacggagctcagtttc 21203720 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 cccatggcgcactgcctcgccgccg 98 ||||||||||||| ||||||||||| Sbjct: 21205410 cccatggcgcactccctcgccgccg 21205386 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tctcgccgtccgccgtccgc 127 |||||||||||||||||||| Sbjct: 14504700 tctcgccgtccgccgtccgc 14504719
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 127 bits (64), Expect = 4e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 ||||||||||||||||||||||||||| || |||||||||||||| || |||||||| || Sbjct: 13480 ggttgagattgtgatgggcctcgaggaggaattcaacatcactgtcgacgaaacaagtgc 13539 Query: 457 gcaggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 ||||||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 13540 gcaggacatcgcaactgttcaagatgcagcaaacctgatcgagaagct 13587 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 272 caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 331 ||||| |||||||||||||||||||||||||| | ||||| |||| ||||||||| || Sbjct: 13277 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 13336 Query: 332 cctgatggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcacta 391 ||||| || || ||||||| | || || |||||||| ||||| ||||| || ||||| Sbjct: 13337 cctgagggaactgctgtcactggtgaatcaaaattctctgaactcggtgctgattcactg 13396 Query: 392 gacacggt 399 || ||||| Sbjct: 13397 gatacggt 13404 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 143 caggtggctaatgtagtttcgagccggagctcagtttc 180 |||||| |||||||| ||||||| |||||||||||||| Sbjct: 12662 caggtgactaatgtaatttcgagacggagctcagtttc 12699 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 cccatggcgcactgcctcgccgccg 98 ||||||||||||| ||||||||||| Sbjct: 11009 cccatggcgcactccctcgccgccg 11033
>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 95132 Score = 127 bits (64), Expect = 4e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 ||||||||||||||||||||||||||| || |||||||||||||| || |||||||| || Sbjct: 84558 ggttgagattgtgatgggcctcgaggaggaattcaacatcactgtcgacgaaacaagtgc 84617 Query: 457 gcaggacattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 ||||||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 84618 gcaggacatcgcaactgttcaagatgcagcaaacctgatcgagaagct 84665 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 272 caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 331 ||||| |||||||||||||||||||||||||| | ||||| |||| ||||||||| || Sbjct: 84355 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 84414 Query: 332 cctgatggtacacctgtcacagcggagtcgaaattctccgaacttggtgccgactcacta 391 ||||| || || ||||||| | || || |||||||| ||||| ||||| || ||||| Sbjct: 84415 cctgagggaactgctgtcactggtgaatcaaaattctctgaactcggtgctgattcactg 84474 Query: 392 gacacggt 399 || ||||| Sbjct: 84475 gatacggt 84482 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 143 caggtggctaatgtagtttcgagccggagctcagtttc 180 |||||| |||||||| ||||||| |||||||||||||| Sbjct: 83740 caggtgactaatgtaatttcgagacggagctcagtttc 83777 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 cccatggcgcactgcctcgccgccg 98 ||||||||||||| ||||||||||| Sbjct: 82087 cccatggcgcactccctcgccgccg 82111
>emb|X95895.1|ZMACP Z.mays mRNA for acyl carrier protein Length = 400 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 359 tcgaaattctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctc 418 ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||| Sbjct: 43 tcgaaattctctgaacttggtgcggattcgctggacacggttgagattgtgatgggcctt 102 Query: 419 gaggaa 424 |||||| Sbjct: 103 gaggaa 108
>ref|XM_483668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 724 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 365 ttctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaa 424 ||||| || |||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 288 ttctcagatcttggtgctgattcactggacacggttgagattgtgatgggtctcgaggag 347 Query: 425 gagttcaacatca 437 |||||| |||||| Sbjct: 348 gagttccacatca 360
>gb|BT019098.1| Zea mays clone Contig697.F mRNA sequence Length = 702 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 359 tcgaaattctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctc 418 ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||| Sbjct: 368 tcgaaattctctgaacttggtgcggattcgctggacacggttgagattgtgatgggcctt 309 Query: 419 gagga 423 ||||| Sbjct: 308 gagga 304
>dbj|AK120938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037A21, full insert sequence Length = 724 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 365 ttctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaa 424 ||||| || |||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 288 ttctcagatcttggtgctgattcactggacacggttgagattgtgatgggtctcgaggag 347 Query: 425 gagttcaacatca 437 |||||| |||||| Sbjct: 348 gagttccacatca 360
>gb|AY104707.1| Zea mays PCO060889 mRNA sequence Length = 777 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 359 tcgaaattctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctc 418 ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||| Sbjct: 335 tcgaaattctctgaacttggtgcggattcgctggacacggttgagattgtgatgggcctt 394 Query: 419 gagga 423 ||||| Sbjct: 395 gagga 399
>gb|BT016215.1| Zea mays clone Contig48 mRNA sequence Length = 766 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 359 tcgaaattctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctc 418 ||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||| | ||| Sbjct: 354 tcgaaattctctgaactcggtgcagattcactggacacggttgagattgtgatgagtctc 413 Query: 419 gagga 423 ||||| Sbjct: 414 gagga 418
>emb|X57956.1|ZMACPAA Z.mays acp mRNA for acyl carrier protein Length = 492 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 359 tcgaaattctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctc 418 ||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||| | ||| Sbjct: 217 tcgaaattctctgaactcggtgcagattcactggacacggttgagattgtgatgagtctc 276 Query: 419 gagga 423 ||||| Sbjct: 277 gagga 281
>gb|AY104517.1| Zea mays PCO060888 mRNA sequence Length = 805 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 359 tcgaaattctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctc 418 ||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||| | ||| Sbjct: 352 tcgaaattctctgaactcggtgcagattcactggacacggttgagattgtgatgagtctc 411 Query: 419 gagga 423 ||||| Sbjct: 412 gagga 416
>gb|M24426.1|BLYACPIII Barley acyl carrier protein III (ACP III) mRNA, complete cds Length = 520 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 365 ttctccgaacttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaa 424 ||||| || ||||| || || ||||| |||||||||||||||||||||||||| ||||| Sbjct: 173 ttctctgaccttggagctgattcactggacacggttgagattgtgatgggccttgaggag 232 Query: 425 gagttc 430 |||||| Sbjct: 233 gagttc 238
>gb|AF428256.1|AF428256 Olea europaea acyl carrier protein (ACP) mRNA, complete cds Length = 763 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagtt 429 ||||||||| || || || ||||||||||||||||| ||||| |||||||||||||| Sbjct: 387 acttggtgctgattcccttgacacggttgagattgtcatgggactcgaggaagagtt 443
>ref|XM_470475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 374 cttggtgccgactcactagacacggttgagattgtgatgggcctcgagga 423 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 328 cttggtgctgattcacttgacacggttgaaattgtgatgggccttgagga 377
>dbj|AK108342.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B02, full insert sequence Length = 651 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 374 cttggtgccgactcactagacacggttgagattgtgatgggcctcgagga 423 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 328 cttggtgctgattcacttgacacggttgaaattgtgatgggccttgagga 377
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatca 437 |||||||||||||||||| |||||||| |||||| |||||| Sbjct: 64055 ggttgagattgtgatgggtctcgaggaggagttccacatca 64015
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatca 437 |||||||||||||||||| |||||||| |||||| |||||| Sbjct: 27559016 ggttgagattgtgatgggtctcgaggaggagttccacatca 27558976
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatca 437 |||||||||||||||||| |||||||| |||||| |||||| Sbjct: 41306 ggttgagattgtgatgggtctcgaggaggagttccacatca 41266
>emb|AJ584698.1| Cicer arietinum partial mRNA for acyl carrier protein 1 (acp1 gene), clone CanACP1 Length = 528 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 345 ctgtcacagcggagtcgaaattctccgaacttggtgccgactcactagacacggttgaga 404 ||||||| | |||||| ||||| || | |||||| || || || || ||||||||||||| Sbjct: 104 ctgtcaccggggagtccaaattttctgcacttggagctgattctcttgacacggttgaga 163 Query: 405 ttgtgatgggcctcgagga 423 |||||||||| || ||||| Sbjct: 164 ttgtgatgggacttgagga 182
>gb|M17636.1|SPIACPI Spinach acyl carrier protein I (ACP-I) mRNA, complete cds Length = 664 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagttc 430 |||||||||||||| |||||| |||||||||||||||| Sbjct: 346 gacacggttgagatagtgatgaacctcgaggaagagttc 384
>ref|NM_104336.3| Arabidopsis thaliana ACP2 (ACYL CARRIER PROTEIN 2) AT1G54580 (ACP2) mRNA, complete cds Length = 795 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||| || || || || ||||| |||||||||||||| || |||||||||||| Sbjct: 397 acttggtgctgattcccttgatacggtggagattgtgatgggactagaggaagagttc 454
>emb|X13127.1|BNACP22C Brassica napus 22C01 mRNA for seed acyl-carrier protein (ACP) Length = 291 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 ||||||||||||||||||||||| | ||||||||||| Sbjct: 160 gacacggttgagattgtgatgggtttggaggaagagtt 197
>emb|X13124.1|BNACP04F Brassica napus 04F05/05E01 mRNA for seed acyl-carrier protein (ACP) Length = 319 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 ||||||||||||||||||||||| | ||||||||||| Sbjct: 274 gacacggttgagattgtgatgggtttagaggaagagtt 311
>emb|X13123.1|BNACP34F Brassica napus 34F12 mRNA for seed acyl-carrier protein (ACP) Length = 368 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 ||||||||||||||||||||||| | ||||||||||| Sbjct: 237 gacacggttgagattgtgatgggtttagaggaagagtt 274
>gb|AY081661.1| Arabidopsis thaliana acyl carrier protein isoform 2 (At1g54580) mRNA, complete cds Length = 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||| || || || || ||||| |||||||||||||| || |||||||||||| Sbjct: 258 acttggtgctgattcccttgatacggtggagattgtgatgggactagaggaagagttc 315
>gb|AY062773.1| Arabidopsis thaliana tissue-specific acyl carrier protein isoform 2 from A (At1g54580; T22H22.3) mRNA, complete cds Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||| || || || || ||||| |||||||||||||| || |||||||||||| Sbjct: 344 acttggtgctgattcccttgatacggtggagattgtgatgggactagaggaagagttc 401
>emb|BX814818.1|CNS0AEA5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 692 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||| || || || || ||||| |||||||||||||| || |||||||||||| Sbjct: 294 acttggtgctgattcccttgatacggtggagattgtgatgggactagaggaagagttc 351
>gb|AY088071.1| Arabidopsis thaliana clone 40893 mRNA, complete sequence Length = 731 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||| || || || || ||||| |||||||||||||| || |||||||||||| Sbjct: 399 acttggtgctgattcccttgatacggtggagattgtgatgggactagaggaagagttc 456
>gb|AF041386.1|AF041386 Fragaria x ananassa clone FANR3 acyl carrier protein mRNA, complete cds Length = 674 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 463 cattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 |||||||||||| |||||||| ||| | |||||||||||||| Sbjct: 389 cattgcaaccgttcaggatgctgcggatcttatcgagaagct 430
>gb|L14814.1|ATHCARPRO Arabidopsis thaliana tissue-specific acyl carrier protein isoform 2 cDNA Length = 716 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||| || || || || ||||| |||||||||||||| || |||||||||||| Sbjct: 318 acttggtgctgattcccttgatacggtggagattgtgatgggactagaggaagagttc 375
>gb|M58754.1|BLYACL3 Hordeum vulgare acyl carrier protein III (Acl3) gene, complete cds Length = 4830 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 397 ggttgagattgtgatgggcctcgaggaagagttc 430 ||||||||||||||||||||| ||||| |||||| Sbjct: 3850 ggttgagattgtgatgggccttgaggaggagttc 3883
>gb|M63799.1|BLYACL2 Barley acyl carrier protein II (Ac12) mRNA, complete cds Length = 706 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 374 cttggtgccgactcactagacacggttgagattgtgatgggcctcgagga 423 ||||||||||| || | || |||||||||||||| |||||||||||||| Sbjct: 344 cttggtgccgattctttggatacggttgagattgttatgggcctcgagga 393
>gb|BT012821.1| Lycopersicon esculentum clone 113870R, mRNA sequence Length = 827 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaag 425 ||||||||| || || || ||||||||||||||||| ||||| || ||||||| Sbjct: 399 acttggtgctgattctcttgacacggttgagattgtcatgggacttgaggaag 451
>gb|AF127796.1|AF127796 Capsicum chinense acyl carrier protein (Acl1) mRNA, complete cds Length = 683 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 373 acttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaag 425 ||||||||| || || || ||||||||||||||||| ||||| || ||||||| Sbjct: 284 acttggtgctgattctcttgacacggttgagattgtcatgggacttgaggaag 336
>emb|Y10994.1|CGACP C.glauca mRNA for acyl carrier protein Length = 738 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgagga 423 ||||||||||||||||||||||| || ||||| Sbjct: 394 gacacggttgagattgtgatgggacttgagga 425
>emb|X13126.1|BNACP10C Brassica napus 10C04 mRNA for seed acyl-carrier protein (ACP) Length = 337 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 374 cttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagtt 429 ||||| || ||||| || |||||||||||||| |||||||| | ||||||||||| Sbjct: 185 cttggagcagactctctcgacacggttgagatagtgatgggtttagaggaagagtt 240
>dbj|AK058903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-B10, full insert sequence Length = 414 Score = 48.1 bits (24), Expect = 0.029 Identities = 75/92 (81%) Strand = Plus / Plus Query: 369 ccgaacttggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagt 428 |||| |||||||| || || || || |||||||||||||| ||||| || || || | | Sbjct: 67 ccgatcttggtgctgattccctggatacggttgagattgttatgggtcttgaagaggctt 126 Query: 429 tcaacatcactgttgatgaaacaagcgcgcag 460 |||| |||| ||| |||||| ||||||||||| Sbjct: 127 tcaagatcagtgtcgatgaatcaagcgcgcag 158
>ref|NM_122602.1| Arabidopsis thaliana ACP5; acyl carrier AT5G27200 (ACP5) mRNA, complete cds Length = 420 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagttc 430 |||||||||||||| |||||||| | |||||||||||| Sbjct: 286 gacacggttgagatagtgatgggtttggaggaagagttc 324
>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence Length = 132140 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 414 gcctcgaggaagagttcaacatc 436 ||||||||||||||||||||||| Sbjct: 24226 gcctcgaggaagagttcaacatc 24204
>gb|AF083950.1|AF083950 Coriandrum sativum acyl carrier protein (ACP-1) mRNA, complete cds Length = 566 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 395 acggttgagattgtgatgggcctcgaggaagagtt 429 |||||||||||||||||||| || ||||| ||||| Sbjct: 362 acggttgagattgtgatgggactagaggaggagtt 396
>emb|X77622.1|CLACP13 C.lanceolata ACP1-3 mRNA for acyl carrier protein Length = 688 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 331 gacacggtggagattgtcatgggactagaggaagagtt 368
>emb|X57698.1|ATACPA1 Arabidopsis thaliana A1 gene for acyl carrier protein, exons 1 to 4 Length = 1927 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 gagattgtgatgggcctcgaggaagagttc 430 |||||||||||||| || |||||||||||| Sbjct: 1635 gagattgtgatgggactagaggaagagttc 1664
>emb|X13125.1|BNACP34C Brassica napus 34C02 mRNA for seed acyl-carrier protein (ACP) Length = 405 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 |||||||||||||| |||||||| | ||||||||||| Sbjct: 274 gacacggttgagatagtgatgggtttagaggaagagtt 311
>emb|X13122.1|BNACP10H Brassica napus 10H11/11D11 mRNA for seed acyl-carrier protein (ACP) Length = 405 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 |||||||||||||| |||||||| | ||||||||||| Sbjct: 274 gacacggttgagatagtgatgggtttagaggaagagtt 311
>emb|X07970.1|BNACP28F Brassica napus 28F10 mRNA for seed acyl-carrier protein (ACP) Length = 671 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagtt 429 |||||||||||||| |||||||| | ||||||||||| Sbjct: 334 gacacggttgagatagtgatgggtttagaggaagagtt 371
>emb|AJ001446.1|FVAJ1446 Fragaria vesca mRNA for putative acyl carrier protein Length = 700 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 463 cattgcaaccgtgcaggatgcagcgaaccttatcgagaagct 504 ||||||||| || |||||||| ||| | |||||||||||||| Sbjct: 412 cattgcaactgttcaggatgctgcggatcttatcgagaagct 453 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 acggttgagattgtgatggg 414 |||||||||||||||||||| Sbjct: 344 acggttgagattgtgatggg 363
>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 87768 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 gagattgtgatgggcctcgaggaagagttc 430 |||||||||||||| || |||||||||||| Sbjct: 19157 gagattgtgatgggactagaggaagagttc 19186
>emb|BX814165.1|CNS0AC63 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1330 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 gagattgtgatgggcctcgaggaagagttc 430 |||||||||||||| || |||||||||||| Sbjct: 1103 gagattgtgatgggactagaggaagagttc 1132
>ref|NM_111374.1| Arabidopsis thaliana ACP1 AT3G05020 (ACP1) mRNA, complete cds Length = 701 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagttcaacatc 436 |||||||||||||| || ||||| | ||||||||||| |||||| Sbjct: 359 gacacggttgagatagtaatgggtttagaggaagagtttaacatc 403
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 tatgatagtcaagaagcagct 324 ||||||||||||||||||||| Sbjct: 2097152 tatgatagtcaagaagcagct 2097132
>gb|AY770500.1| Coriandrum sativum acyl carrier protein gene, complete cds Length = 1753 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 397 ggttgagattgtgatgggcctcgaggaagagtt 429 |||||||||||||||||| || ||||| ||||| Sbjct: 1617 ggttgagattgtgatgggactagaggaggagtt 1649
>emb|X16115.1|BNACP09 Brassica napus ACP09 DNA for acyl carrier protein Length = 1083 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 397 ggttgagattgtgatgggcctcgaggaagagtt 429 |||||||||||||||||| | ||||||||||| Sbjct: 813 ggttgagattgtgatgggtttggaggaagagtt 845
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 tatgatagtcaagaagcagct 324 ||||||||||||||||||||| Sbjct: 2055575 tatgatagtcaagaagcagct 2055555
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 tatgatagtcaagaagcagct 324 ||||||||||||||||||||| Sbjct: 2082360 tatgatagtcaagaagcagct 2082340
>emb|BX294133.1| Pirellula sp. strain 1 complete genome; segment 1/24 Length = 311050 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 377 ggtgccgactcactagacacggttgagattgtgatgggcctcgaggaagagttcaacatc 436 ||||||||||| || ||||| ||||| | ||||||| ||||| ||||||||| ||||| Sbjct: 159027 ggtgccgactcgctcgacactgttgaattggtgatggagctcgaagaagagttcgacatc 159086 Query: 437 a 437 | Sbjct: 159087 a 159087
>gb|AY623761.1| Rattus norvegicus defensin alpha 9 (Defa9) gene, complete cds Length = 4197 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 tgatagtcaagaagcagctgg 326 ||||||||||||||||||||| Sbjct: 3673 tgatagtcaagaagcagctgg 3653
>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete sequence Length = 176432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gctgtccagccaggtggctaa 153 ||||||||||||||||||||| Sbjct: 103336 gctgtccagccaggtggctaa 103316
>gb|BT006397.1| Arabidopsis thaliana At3g05020 gene, complete cds Length = 414 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagttcaacatc 436 |||||||||||||| || ||||| | ||||||||||| |||||| Sbjct: 283 gacacggttgagatagtaatgggtttagaggaagagtttaacatc 327
>gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome 13, complete sequence Length = 204262 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gctgtccagccaggtggctaa 153 ||||||||||||||||||||| Sbjct: 31357 gctgtccagccaggtggctaa 31337
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cgccgtccgccgtccgccggc 131 ||||||||||||||||||||| Sbjct: 21031268 cgccgtccgccgtccgccggc 21031248 Score = 40.1 bits (20), Expect = 7.2 Identities = 53/64 (82%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 |||||||||||| ||||| || || || | ||||| |||| ||| |||||| ||||||| Sbjct: 20953262 ggttgagattgttatgggtcttgaagaggctttcaagatcagtgtcgatgaatcaagcgc 20953203 Query: 457 gcag 460 |||| Sbjct: 20953202 gcag 20953199
>gb|AY085288.1| Arabidopsis thaliana clone 14291 mRNA, complete sequence Length = 703 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 392 gacacggttgagattgtgatgggcctcgaggaagagttcaacatc 436 |||||||||||||| || ||||| | ||||||||||| |||||| Sbjct: 360 gacacggttgagatagtaatgggtttagaggaagagtttaacatc 404
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cgccgtccgccgtccgccggc 131 ||||||||||||||||||||| Sbjct: 123357 cgccgtccgccgtccgccggc 123337 Score = 40.1 bits (20), Expect = 7.2 Identities = 53/64 (82%) Strand = Plus / Minus Query: 397 ggttgagattgtgatgggcctcgaggaagagttcaacatcactgttgatgaaacaagcgc 456 |||||||||||| ||||| || || || | ||||| |||| ||| |||||| ||||||| Sbjct: 45351 ggttgagattgttatgggtcttgaagaggctttcaagatcagtgtcgatgaatcaagcgc 45292 Query: 457 gcag 460 |||| Sbjct: 45291 gcag 45288
>dbj|AK060244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G05, full insert sequence Length = 724 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cgccgtccgccgtccgccggc 131 ||||||||||||||||||||| Sbjct: 68 cgccgtccgccgtccgccggc 88
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cgccgtccgccgtccgccggc 131 ||||||||||||||||||||| Sbjct: 52568 cgccgtccgccgtccgccggc 52548
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 aagaaagagacagtcgacaa 297 |||||||||||||||||||| Sbjct: 286784 aagaaagagacagtcgacaa 286765
>ref|NM_052843.2| Homo sapiens obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (OBSCN), mRNA Length = 20431 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 tttcgagccggagctcagtttctt 182 |||||||| ||||||||||||||| Sbjct: 4781 tttcgagctggagctcagtttctt 4758
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcgccgtccgccgtccgccg 129 |||||||||||||||||||| Sbjct: 50449 tcgccgtccgccgtccgccg 50430
>gb|AY487232.1| Arabidopsis arenosa isolate Aren3 RPP13-like protein gene, partial cds Length = 1816 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 gaagcttgtgacagagaaga 518 |||||||||||||||||||| Sbjct: 122 gaagcttgtgacagagaaga 141
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence Length = 170409 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 acaggccaagaaagagacag 290 |||||||||||||||||||| Sbjct: 129237 acaggccaagaaagagacag 129256
>emb|CT010574.8| Mouse DNA sequence from clone RP23-269E16 on chromosome 16, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 gaggcacaggccaagaaagagaca 289 |||||||||||||||| ||||||| Sbjct: 4750 gaggcacaggccaagacagagaca 4773
>emb|CR388163.10| Zebrafish DNA sequence from clone CH211-247L8 in linkage group 15, complete sequence Length = 182247 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gcttcggtttaagatttgtt 251 |||||||||||||||||||| Sbjct: 169846 gcttcggtttaagatttgtt 169865
>emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on chromosome 1q42.1-43 Contains part of the OBSCN gene for obscurin cytoskeletal calmodulin and titin-interacting RhoGEF protein and four CpG islands, complete sequence Length = 135964 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 tttcgagccggagctcagtttctt 182 |||||||| ||||||||||||||| Sbjct: 51594 tttcgagctggagctcagtttctt 51571
>emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chromosome 9 Contains the 3' end of a novel gene (SHC3) and a novel gene, complete sequence Length = 113051 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gtttgtatgatagtcaagaa 318 |||||||||||||||||||| Sbjct: 22129 gtttgtatgatagtcaagaa 22148
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccttctcgccgtccgccgtc 124 |||||||||||||||||||| Sbjct: 187318 ccttctcgccgtccgccgtc 187337
>emb|AJ002535.1|HSAJ2535 Homo sapiens mRNA for obscurin (OBSCN gene) Length = 20435 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 tttcgagccggagctcagtttctt 182 |||||||| ||||||||||||||| Sbjct: 4808 tttcgagctggagctcagtttctt 4785
>gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosome 16, complete sequence Length = 193598 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 gaggcacaggccaagaaagagaca 289 |||||||||||||||| ||||||| Sbjct: 107824 gaggcacaggccaagacagagaca 107847
>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence Length = 200787 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 gaggcacaggccaagaaagagaca 289 |||||||||||||||| ||||||| Sbjct: 13768 gaggcacaggccaagacagagaca 13745
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcgccgtccgccgtccgccg 129 |||||||||||||||||||| Sbjct: 29271792 tcgccgtccgccgtccgccg 29271773
>emb|BX816559.1|CNS0ABKW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 643 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 395 acggttgagattgtgatgggcctcgaggaagagttc 430 ||||| |||||||||||||| | |||||||||||| Sbjct: 363 acggtggagattgtgatgggacgagaggaagagttc 398
>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence Length = 130466 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 acaggccaagaaagagacag 290 |||||||||||||||||||| Sbjct: 127650 acaggccaagaaagagacag 127669
>dbj|AK107074.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F02, full insert sequence Length = 1927 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tcgccgtccgccgtccgccg 129 |||||||||||||||||||| Sbjct: 60 tcgccgtccgccgtccgccg 79
>emb|AJ314901.1|HSA314901 Homo sapiens partial OBSCN gene for obscurin, exons B and 17 Length = 10091 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 tttcgagccggagctcagtttctt 182 |||||||| ||||||||||||||| Sbjct: 6031 tttcgagctggagctcagtttctt 6008
>dbj|AK062360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H04, full insert sequence Length = 461 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tcgccgtccgccgtccgccg 129 |||||||||||||||||||| Sbjct: 19 tcgccgtccgccgtccgccg 38
>gb|AY107648.1| Zea mays PCO091217 mRNA sequence Length = 1343 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cctccttctcgccgtccgccgtcc 125 ||||| |||||||||||||||||| Sbjct: 50 cctccctctcgccgtccgccgtcc 73
>gb|AF075251.1|AF075251 Venezuelan equine encephalitis virus strain Everglades Fe3-7c, complete genome Length = 11395 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tggcagtccctgatggtaca 343 |||||||||||||||||||| Sbjct: 10963 tggcagtccctgatggtaca 10944
>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158261 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tctcgccgtccgccgtccgc 127 |||||||||||||||||||| Sbjct: 110877 tctcgccgtccgccgtccgc 110858
>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence Length = 205819 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cacaggccaagaaagagaca 289 |||||||||||||||||||| Sbjct: 126782 cacaggccaagaaagagaca 126801
>gb|U48777.1|GHU48777 Gossypium hirsutum fiber-specific acyl carrier protein (ACP1) mRNA, complete cds Length = 713 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 395 acggttgagattgtgatgggcctcgaggaaga 426 ||||||||||||||| |||| || |||||||| Sbjct: 316 acggttgagattgtgttgggacttgaggaaga 347
>emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-66E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 148068 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gaagcagctggcagtccctg 335 |||||||||||||||||||| Sbjct: 44951 gaagcagctggcagtccctg 44970
>gb|L04598.1|EEVE321X Venezuelan equine encephalitis (VEE) virus nucleocapsid protein; structural protein; glycopeptide cleavage byproduct (E3); envelope glycoprotein (E2 and E1) and polyprotein precursor mRNA Length = 3910 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tggcagtccctgatggtaca 343 |||||||||||||||||||| Sbjct: 3478 tggcagtccctgatggtaca 3459 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,108,289 Number of Sequences: 3902068 Number of extensions: 4108289 Number of successful extensions: 70547 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70134 Number of HSP's gapped (non-prelim): 409 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)