ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdk05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 583 e-163
2gb|AY107212.1| Zea mays PCO081119 mRNA sequence 450 e-123
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 341 1e-90
4dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic D... 341 1e-90
5ref|NM_121306.2| Arabidopsis thaliana unknown protein AT5G13030 ... 133 7e-28
6gb|BT000882.1| Arabidopsis thaliana clone C105358 unknown protei... 133 7e-28
7gb|AF360158.1| Arabidopsis thaliana unknown protein (At5g13030) ... 133 7e-28
8emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BA... 133 7e-28
9emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, B... 133 7e-28
10dbj|AK176734.1| Arabidopsis thaliana mRNA, partial cds, clone: R... 133 7e-28
11dbj|AK176541.1| Arabidopsis thaliana mRNA, partial cds, clone: R... 133 7e-28
12dbj|AK176478.1| Arabidopsis thaliana mRNA, partial cds, clone: R... 133 7e-28
13gb|BT013208.1| Lycopersicon esculentum clone 134418R, mRNA sequence 125 2e-25
14gb|BC048849.1| Mus musculus RIKEN cDNA 1300018J18 gene, mRNA (cD... 44 0.47
15ref|XM_778517.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.47
16dbj|AK161059.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 44 0.47
17gb|AC113069.10| Mus musculus chromosome 15, clone RP23-269F24, c... 44 0.47
18dbj|AK088096.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.47
19dbj|AK054432.1| Mus musculus 2 days pregnant adult female ovary ... 44 0.47
20dbj|AK005048.1| Mus musculus adult male liver cDNA, RIKEN full-l... 44 0.47
21ref|NM_027905.2| Mus musculus RIKEN cDNA 1300018J18 gene (130001... 44 0.47
22ref|XM_235559.3| PREDICTED: Rattus norvegicus hypothetical LOC31... 44 0.47
23emb|AL451144.5| Human DNA sequence from clone RP11-151J4 on chro... 42 1.9
24emb|CR450814.4| Zebrafish DNA sequence from clone CH211-157B11 i... 42 1.9
25emb|AL831721.30| Zebrafish DNA sequence from clone CH211-211O10 ... 42 1.9
26emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 42 1.9
27emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.9
28emb|CR384099.6| Zebrafish DNA sequence from clone DKEY-266I18 in... 42 1.9
29emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in ... 42 1.9
30gb|AC010306.6| Homo sapiens chromosome 5 clone CTB-45L16, comple... 42 1.9
31emb|BX005205.17| Zebrafish DNA sequence from clone DKEY-210P14 i... 42 1.9
32emb|BX088529.6| Zebrafish DNA sequence from clone CH211-286H12, ... 42 1.9
33gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome... 42 1.9
34emb|BX293553.4| Zebrafish DNA sequence from clone CH211-256J2 in... 42 1.9
35emb|BX248135.5| Zebrafish DNA sequence from clone CH211-106J4 in... 42 1.9
36gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosom... 42 1.9
37ref|XM_641914.1| Dictyostelium discoideum hypothetical protein (... 40 7.4
38ref|XM_629528.1| Dictyostelium discoideum TFIID subunit (DDB0231... 40 7.4
39ref|XM_414240.1| PREDICTED: Gallus gallus LOC415884 (LOC415884),... 40 7.4
40gb|AC110230.12| Mus musculus chromosome 6, clone RP23-54L18, com... 40 7.4
41gb|AC112686.10| Mus musculus chromosome 6, clone RP23-354N21, co... 40 7.4
42emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 ... 40 7.4
43emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in ... 40 7.4
44emb|CR937050.2| Rattus norvegicus chromosome 5 BAC CH230-339J16,... 40 7.4
45gb|AC122341.3| Mus musculus BAC clone RP23-355F8 from chromosome... 40 7.4
46ref|XM_815500.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.4
47gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, comple... 40 7.4
48gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosom... 40 7.4
49emb|BX936327.3| Zebrafish DNA sequence from clone DKEY-21E10 in ... 40 7.4
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
51gb|AC084273.20| Mus musculus strain C57BL/6J chromosome 6 clone ... 40 7.4
52dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 7.4
53emb|BX005131.14| Zebrafish DNA sequence from clone DKEY-195B5 in... 40 7.4
54emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.4
55emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.4
56emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, co... 40 7.4
57gb|AF218567.1|AF218567 Cryphonectria parasitica putative maturas... 40 7.4
58dbj|AK073264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
59dbj|AK071849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
60emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in... 40 7.4
61emb|BX255939.3| Zebrafish DNA sequence from clone DKEY-5G7 in li... 40 7.4
62emb|CR555298.10| Zebrafish DNA sequence from clone CH211-25D12 i... 40 7.4
63emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chro... 40 7.4
64gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
65emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G... 40 7.4
66gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 7.4
67emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chr... 40 7.4 
>dbj|AK072187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145E07, full
            insert sequence
          Length = 2237

 Score =  583 bits (294), Expect = e-163
 Identities = 471/530 (88%)
 Strand = Plus / Plus

                                                                        
Query: 14   cactacccacatcttgaaaatattaaaaagagtgaaggtttatcatttgaggcagctata 73
            |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 947  cactacccacatctcgaaaatattaaaaagagtgaaggtttatcttttgaagcagctata 1006

                                                                        
Query: 74   ggtgactctccagcaatagatcttacttccaacaaatatgcagcctgggcagttgaggtc 133
            || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 1007 ggggactctccagcgatagatcttacttcgaacaaatatgcagcctgggcagttgaggtt 1066

                                                                        
Query: 134  gcagagcgtactgcttacttgatagccaggtggcaaggtgttggtttcacccatggtgtg 193
            |||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 1067 gcagagcgcactgctttcttgatagcaaggtggcaaggtgttggttttacccatggtgtg 1126

                                                                        
Query: 194  cttaacactgataatatgagtgtgttgggccttactattgactatggaccctttggtttc 253
            || ||||| |||||||||||||| || || || ||||||||||||||||||||||| || 
Sbjct: 1127 ctcaacacggataatatgagtgtattaggactaactattgactatggaccctttggcttt 1186

                                                                        
Query: 254  ttagatgcttttgatcctagcttcactccgaatacaactgacctaccaggtaagagatac 313
            || |||||||||||||||||||  ||||| |||||||| ||||| || || |||||||||
Sbjct: 1187 ttggatgcttttgatcctagctatactccaaatacaacagacctccctgggaagagatac 1246

                                                                        
Query: 314  tgttttgcaaatcaacctgatgttggtttgtggaatattgcccagttcactgggccattg 373
            |||||||||||||||||||||||||| |||||||||||||| ||||| ||    ||||||
Sbjct: 1247 tgttttgcaaatcaacctgatgttggcttgtggaatattgctcagtttacctcaccattg 1306

                                                                        
Query: 374  tcggctgcagatctcatcagcaaggatgaggcaaattatgtaatggagaggtatgggaca 433
             | ||||| || || |||||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 1307 acagctgccgaacttatcagcaaagatgaggcaaattatgtgatggagaggtacgggaca 1366

                                                                        
Query: 434  aagttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataac 493
            ||||| ||||| || |||||||| |||||||| | ||||||||||||  | || ||||| 
Sbjct: 1367 aagtttatggatgagtatcaatccataatgaccaggaaacttggtctacccaagtataat 1426

                                                              
Query: 494  aagcagcttattagcaagctgctgaacaacttggctgttgataaagtcga 543
            |||||||| ||  |||||||||| |||||| ||||||||||||| |||||
Sbjct: 1427 aagcagctaataggcaagctgcttaacaacctggctgttgataaggtcga 1476
to top
>gb|AY107212.1| Zea mays PCO081119 mRNA sequence
          Length = 1323

 Score =  450 bits (227), Expect = e-123
 Identities = 443/515 (86%)
 Strand = Plus / Plus

                                                                       
Query: 20  ccacatcttgaaaatattaaaaagagtgaaggtttatcatttgaggcagctataggtgac 79
           ||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||| || 
Sbjct: 174 ccacatcttgaaaatatgaaaaagagtgaaggtttgtcattcgagacagctataggagat 233

                                                                       
Query: 80  tctccagcaatagatcttacttccaacaaatatgcagcctgggcagttgaggtcgcagag 139
           || ||| |||||||||| || || |||||||||||||| |||||||||||||| || |||
Sbjct: 234 tccccaacaatagatctcacatcaaacaaatatgcagcttgggcagttgaggtggcggag 293

                                                                       
Query: 140 cgtactgcttacttgatagccaggtggcaaggtgttggtttcacccatggtgtgcttaac 199
            | ||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||
Sbjct: 294 aggactgcttacttgatagctagatggcaaggtgttggcttcacccatggtgtacttaac 353

                                                                       
Query: 200 actgataatatgagtgtgttgggccttactattgactatggaccctttggtttcttagat 259
           ||||| || ||||||||| ||||||| |||||||| |||||||| ||||| ||  | |||
Sbjct: 354 actgacaacatgagtgtgctgggcctaactattgattatggaccatttggatttctcgat 413

                                                                       
Query: 260 gcttttgatcctagcttcactccgaatacaactgacctaccaggtaagagatactgtttt 319
           || |||||||||||||  ||||| ||||| ||||| || || || ||||| |||||||||
Sbjct: 414 gcatttgatcctagctatactccaaatactactgatcttcctgggaagaggtactgtttt 473

                                                                       
Query: 320 gcaaatcaacctgatgttggtttgtggaatattgcccagttcactgggccattgtcggct 379
           |||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||  ||
Sbjct: 474 gcaaatcaacctgatgttggcttgtggaatattgctcagttcactggaccactgtcctct 533

                                                                       
Query: 380 gcagatctcatcagcaaggatgaggcaaattatgtaatggagaggtatgggacaaagttc 439
           || || || |||||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 534 gctgaacttatcagccaagatgaggcaaattatgtgatggagaggtatgggacaaagttc 593

                                                                       
Query: 440 atggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaagcag 499
           ||||| || || |||||||| ||||| || ||||| ||  |  | || ||||| ||||||
Sbjct: 594 atggatgagtaccaatctatcatgaccaaaaaactgggcttaactaagtataataagcag 653

                                              
Query: 500 cttattagcaagctgctgaacaacttggctgttga 534
           || ||||| |||||||| | |||| |||| |||||
Sbjct: 654 ctaattagtaagctgcttagcaacatggcagttga 688
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  341 bits (172), Expect = 1e-90
 Identities = 277/312 (88%)
 Strand = Plus / Minus

                                                                            
Query: 114      cagcctgggcagttgaggtcgcagagcgtactgcttacttgatagccaggtggcaaggtg 173
                ||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||
Sbjct: 12301381 cagcctgggcagttgaggttgcagagcgcactgctttcttgatagcaaggtggcaaggtg 12301322

                                                                            
Query: 174      ttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggccttactattg 233
                ||||||| |||||||||||||| ||||| |||||||||||||| || || || |||||||
Sbjct: 12301321 ttggttttacccatggtgtgctcaacacggataatatgagtgtattaggactaactattg 12301262

                                                                            
Query: 234      actatggaccctttggtttcttagatgcttttgatcctagcttcactccgaatacaactg 293
                |||||||||||||||| || || |||||||||||||||||||  ||||| |||||||| |
Sbjct: 12301261 actatggaccctttggctttttggatgcttttgatcctagctatactccaaatacaacag 12301202

                                                                            
Query: 294      acctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttgtggaatattg 353
                |||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12301201 acctccctgggaagagatactgttttgcaaatcaacctgatgttggcttgtggaatattg 12301142

                                                                            
Query: 354      cccagttcactgggccattgtcggctgcagatctcatcagcaaggatgaggcaaattatg 413
                | ||||| ||    |||||| | ||||| || || |||||||| ||||||||||||||||
Sbjct: 12301141 ctcagtttacctcaccattgacagctgccgaacttatcagcaaagatgaggcaaattatg 12301082

                            
Query: 414      taatggagaggt 425
                | ||||||||||
Sbjct: 12301081 tgatggagaggt 12301070



 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                            
Query: 14       cactacccacatcttgaaaatattaaaaagagtgaaggtttatcatttgaggcagctata 73
                |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 12301569 cactacccacatctcgaaaatattaaaaagagtgaaggtttatcttttgaagcagctata 12301510

                                                           
Query: 74       ggtgactctccagcaatagatcttacttccaacaaatatgcag 116
                || ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 12301509 ggggactctccagcgatagatcttacttcgaacaaatatgcag 12301467



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                            
Query: 422      aggtatgggacaaagttcatggacgaatatcaatctataatgacaaagaaacttggtctg 481
                ||||| ||||||||||| ||||| || |||||||| |||||||| | |||||||||||| 
Sbjct: 12300988 aggtacgggacaaagtttatggatgagtatcaatccataatgaccaggaaacttggtcta 12300929

                                                                            
Query: 482      tcaaaatataacaagcagcttattagcaagctgctgaacaacttggctgttgataaagtc 541
                 | || ||||| |||||||| ||  |||||||||| |||||| ||||||||||||| |||
Sbjct: 12300928 cccaagtataataagcagctaataggcaagctgcttaacaacctggctgttgataaggtc 12300869

                  
Query: 542      ga 543
                ||
Sbjct: 12300868 ga 12300867
to top
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0578B12
          Length = 151192

 Score =  341 bits (172), Expect = 1e-90
 Identities = 277/312 (88%)
 Strand = Plus / Minus

                                                                         
Query: 114   cagcctgggcagttgaggtcgcagagcgtactgcttacttgatagccaggtggcaaggtg 173
             ||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||
Sbjct: 17841 cagcctgggcagttgaggttgcagagcgcactgctttcttgatagcaaggtggcaaggtg 17782

                                                                         
Query: 174   ttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggccttactattg 233
             ||||||| |||||||||||||| ||||| |||||||||||||| || || || |||||||
Sbjct: 17781 ttggttttacccatggtgtgctcaacacggataatatgagtgtattaggactaactattg 17722

                                                                         
Query: 234   actatggaccctttggtttcttagatgcttttgatcctagcttcactccgaatacaactg 293
             |||||||||||||||| || || |||||||||||||||||||  ||||| |||||||| |
Sbjct: 17721 actatggaccctttggctttttggatgcttttgatcctagctatactccaaatacaacag 17662

                                                                         
Query: 294   acctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttgtggaatattg 353
             |||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 17661 acctccctgggaagagatactgttttgcaaatcaacctgatgttggcttgtggaatattg 17602

                                                                         
Query: 354   cccagttcactgggccattgtcggctgcagatctcatcagcaaggatgaggcaaattatg 413
             | ||||| ||    |||||| | ||||| || || |||||||| ||||||||||||||||
Sbjct: 17601 ctcagtttacctcaccattgacagctgccgaacttatcagcaaagatgaggcaaattatg 17542

                         
Query: 414   taatggagaggt 425
             | ||||||||||
Sbjct: 17541 tgatggagaggt 17530



 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                         
Query: 14    cactacccacatcttgaaaatattaaaaagagtgaaggtttatcatttgaggcagctata 73
             |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 18029 cactacccacatctcgaaaatattaaaaagagtgaaggtttatcttttgaagcagctata 17970

                                                        
Query: 74    ggtgactctccagcaatagatcttacttccaacaaatatgcag 116
             || ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 17969 ggggactctccagcgatagatcttacttcgaacaaatatgcag 17927



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                         
Query: 422   aggtatgggacaaagttcatggacgaatatcaatctataatgacaaagaaacttggtctg 481
             ||||| ||||||||||| ||||| || |||||||| |||||||| | |||||||||||| 
Sbjct: 17448 aggtacgggacaaagtttatggatgagtatcaatccataatgaccaggaaacttggtcta 17389

                                                                         
Query: 482   tcaaaatataacaagcagcttattagcaagctgctgaacaacttggctgttgataaagtc 541
              | || ||||| |||||||| ||  |||||||||| |||||| ||||||||||||| |||
Sbjct: 17388 cccaagtataataagcagctaataggcaagctgcttaacaacctggctgttgataaggtc 17329

               
Query: 542   ga 543
             ||
Sbjct: 17328 ga 17327
to top
>ref|NM_121306.2| Arabidopsis thaliana unknown protein AT5G13030 mRNA, complete cds
          Length = 2359

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 1114 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 1173

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 1174 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 1233

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 1234 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 1293

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 1294 tggaatattgc 1304



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 1387 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 1446

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 1447 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 1490
to top
>gb|BT000882.1| Arabidopsis thaliana clone C105358 unknown protein (At5g13030) mRNA,
            complete cds
          Length = 1933

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 1114 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 1173

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 1174 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 1233

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 1234 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 1293

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 1294 tggaatattgc 1304



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 1387 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 1446

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 1447 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 1490
to top
>gb|AF360158.1| Arabidopsis thaliana unknown protein (At5g13030) mRNA, complete cds
          Length = 2074

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 1109 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 1168

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 1169 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 1228

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 1229 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 1288

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 1289 tggaatattgc 1299



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 1382 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 1441

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 1442 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 1485
to top
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project)
          Length = 82207

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 8751 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 8810

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 8811 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 8870

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 8871 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 8930

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 8931 tggaatattgc 8941



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 9118 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 9177

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 9178 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 9221
to top
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
          Length = 90020

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                         
Query: 164   tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
             ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 87242 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 87301

                                                                         
Query: 224   cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
             |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 87302 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 87361

                                                                         
Query: 284   aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
             || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 87362 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 87421

                        
Query: 344   tggaatattgc 354
             |||||||||||
Sbjct: 87422 tggaatattgc 87432



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                         
Query: 437   ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
             |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 87609 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 87668

                                                         
Query: 497   cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
              || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 87669 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 87712
to top
>dbj|AK176734.1| Arabidopsis thaliana mRNA, partial cds, clone: RAFL25-27-N17
          Length = 2066

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 1112 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 1171

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 1172 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 1231

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 1232 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 1291

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 1292 tggaatattgc 1302



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 1385 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 1444

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 1445 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 1488
to top
>dbj|AK176541.1| Arabidopsis thaliana mRNA, partial cds, clone: RAFL25-06-C11
          Length = 2064

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 1112 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 1171

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 1172 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 1231

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 1232 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 1291

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 1292 tggaatattgc 1302



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 1385 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 1444

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 1445 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 1488
to top
>dbj|AK176478.1| Arabidopsis thaliana mRNA, partial cds, clone: RAFL24-27-O06
          Length = 2066

 Score =  133 bits (67), Expect = 7e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                        
Query: 164  tggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtgttgggc 223
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 1106 tggcaaggtgtaggtttcacccatggtgtgctcaacactgacaatatgagcattttgggt 1165

                                                                        
Query: 224  cttactattgactatggaccctttggtttcttagatgcttttgatcctagcttcactccg 283
            |  || ||||||||||| || ||||||||||| |||||||||||||| || | ||| || 
Sbjct: 1166 caaaccattgactatggcccatttggtttcttggatgcttttgatccaagttacacccca 1225

                                                                        
Query: 284  aatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgttggtttg 343
            || || || || || ||||| |  |||||||||||||||||||| |||||  | || |||
Sbjct: 1226 aacacgacagatctcccaggaagaagatactgttttgcaaatcagcctgacatcggcttg 1285

                       
Query: 344  tggaatattgc 354
            |||||||||||
Sbjct: 1286 tggaatattgc 1296



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                        
Query: 437  ttcatggacgaatatcaatctataatgacaaagaaacttggtctgtcaaaatataacaag 496
            |||||||| || |||||| | |||||| | ||||| ||||||||  | || |||||||||
Sbjct: 1379 ttcatggatgagtatcaagccataatgtctaagaagcttggtcttaccaagtataacaag 1438

                                                        
Query: 497  cagcttattagcaagctgctgaacaacttggctgttgataaagt 540
             || | |||||||| ||  |||||||  || |||||||||||||
Sbjct: 1439 gaggtcattagcaaacttttgaacaatatgtctgttgataaagt 1482
to top
>gb|BT013208.1| Lycopersicon esculentum clone 134418R, mRNA sequence
          Length = 2078

 Score =  125 bits (63), Expect = 2e-25
 Identities = 213/263 (80%)
 Strand = Plus / Plus

                                                                        
Query: 98   acttccaacaaatatgcagcctgggcagttgaggtcgcagagcgtactgcttacttgata 157
            ||||| |||||||||||||| |||||||| || || |||||||  ||||||| |   || 
Sbjct: 954  acttcaaacaaatatgcagcatgggcagtggaagttgcagagcagactgcttccacaatt 1013

                                                                        
Query: 158  gccaggtggcaaggtgttggtttcacccatggtgtgcttaacactgataatatgagtgtg 217
            || ||||||||||||||||||||||| || || ||| | || || ||||| |||||||||
Sbjct: 1014 gcgaggtggcaaggtgttggtttcacacacggagtgatgaataccgataacatgagtgtg 1073

                                                                        
Query: 218  ttgggccttactattgactatggaccctttggtttcttagatgcttttgatcctagcttc 277
            || ||||| || ||||| ||||| || ||||| || ||||| || |||||||| || |||
Sbjct: 1074 ttaggcctcaccattgattatggcccttttggatttttagacgcgtttgatcccagtttc 1133

                                                                        
Query: 278  actccgaatacaactgacctaccaggtaagagatactgttttgcaaatcaacctgatgtt 337
            || || ||||| ||||| ||||| || |  |||||||| ||||| ||||| || ||| | 
Sbjct: 1134 acacccaataccactgatctacctggcagaagatactgctttgcgaatcagccggatata 1193

                                   
Query: 338  ggtttgtggaatattgcccagtt 360
            ||||| |||||| |||| |||||
Sbjct: 1194 ggtttatggaatgttgctcagtt 1216
to top
>gb|BC048849.1| Mus musculus RIKEN cDNA 1300018J18 gene, mRNA (cDNA clone
           IMAGE:5102351), partial cds
          Length = 1418

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 184 ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
           |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 27  ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 86

                 
Query: 244 ctttgg 249
           ||||||
Sbjct: 87  ctttgg 92
to top
>ref|XM_778517.1| PREDICTED: Strongylocentrotus purpuratus similar to selenoprotein O
           (LOC578344), mRNA
          Length = 1647

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 227 actattgactatggaccctttggtttcttagatg 260
           |||||||||||||| || | ||||||||||||||
Sbjct: 604 actattgactatggtccttatggtttcttagatg 637
to top
>dbj|AK161059.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
            library, clone:4632415L16 product:Selenoprotein O homolog
            [Mus musculus], full insert sequence
          Length = 2674

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
            |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 955  ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 1014

                  
Query: 244  ctttgg 249
            ||||||
Sbjct: 1015 ctttgg 1020
to top
>gb|AC113069.10| Mus musculus chromosome 15, clone RP23-269F24, complete sequence
          Length = 192825

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                          
Query: 184    ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
              |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 116658 ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 116717

                    
Query: 244    ctttgg 249
              ||||||
Sbjct: 116718 ctttgg 116723
to top
>dbj|AK088096.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430004B18
            product:weakly similar to DJ402G11.5 (NOVEL PROTEIN
            SIMILAR TO YEAST AND BACTERIAL PREDICTED PROTEINS) [Homo
            sapiens], full insert sequence
          Length = 2688

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
            |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 971  ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 1030

                  
Query: 244  ctttgg 249
            ||||||
Sbjct: 1031 ctttgg 1036
to top
>dbj|AK054432.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330024P20
            product:weakly similar to DJ402G11.5 (NOVEL PROTEIN
            SIMILAR TO YEAST AND BACTERIAL PREDICTED PROTEINS) [Homo
            sapiens], full insert sequence
          Length = 2523

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
            |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 966  ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 1025

                  
Query: 244  ctttgg 249
            ||||||
Sbjct: 1026 ctttgg 1031
to top
>dbj|AK005048.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched
            library, clone:1300018J18 product:hypothetical
            Uncharacterized protein family UPF0061 containing
            protein, full insert sequence
          Length = 2360

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
            |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 1004 ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 1063

                  
Query: 244  ctttgg 249
            ||||||
Sbjct: 1064 ctttgg 1069
to top
>ref|NM_027905.2| Mus musculus RIKEN cDNA 1300018J18 gene (1300018J18Rik), mRNA
          Length = 2360

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
            |||||| ||||| |||||||| || |||||  |  |||| || ||||| |||||||||||
Sbjct: 1004 ccatggcgtgctcaacactgacaacatgagcattgtggggctcactatcgactatggacc 1063

                  
Query: 244  ctttgg 249
            ||||||
Sbjct: 1064 ctttgg 1069
to top
>ref|XM_235559.3| PREDICTED: Rattus norvegicus hypothetical LOC315216 (predicted)
            (LOC315216), mRNA
          Length = 2070

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  ccatggtgtgcttaacactgataatatgagtgtgttgggccttactattgactatggacc 243
            |||||| ||||| |||||||| || |||||  |  ||||||| || || |||||||||||
Sbjct: 1071 ccatggagtgctcaacactgacaacatgagcatcgtgggcctcacgatcgactatggacc 1130

                  
Query: 244  ctttgg 249
            ||||||
Sbjct: 1131 ctttgg 1136
to top
>emb|AL451144.5| Human DNA sequence from clone RP11-151J4 on chromosome X Contains part
             of the DMD gene for dystrophin (muscular dystrophy,
             Duchenne and Becker types) and a tubulin-specific
             chaperone a (TBCA) pseudogene, complete sequence
          Length = 100207

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    atcttgaaaatattaaaaaga 44
             |||||||||||||||||||||
Sbjct: 38584 atcttgaaaatattaaaaaga 38604
to top
>emb|CR450814.4| Zebrafish DNA sequence from clone CH211-157B11 in linkage group 6,
            complete sequence
          Length = 158142

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 454  atctataatgacaaagaaact 474
            |||||||||||||||||||||
Sbjct: 5436 atctataatgacaaagaaact 5416
to top
>emb|AL831721.30| Zebrafish DNA sequence from clone CH211-211O10 in linkage group 1,
             complete sequence
          Length = 88708

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    agagtgaaggtttatcatttg 62
             |||||||||||||||||||||
Sbjct: 60160 agagtgaaggtttatcatttg 60140
to top
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 509    aagctgctgaacaacttggct 529
              |||||||||||||||||||||
Sbjct: 131813 aagctgctgaacaacttggct 131833
to top
>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII project)
          Length = 94315

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 509   aagctgctgaacaacttggct 529
             |||||||||||||||||||||
Sbjct: 11053 aagctgctgaacaacttggct 11073
to top
>emb|CR384099.6| Zebrafish DNA sequence from clone DKEY-266I18 in linkage group 24,
             complete sequence
          Length = 121857

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 38    aaaaagagtgaaggtttatcatttg 62
             |||||||||||| ||||||||||||
Sbjct: 11220 aaaaagagtgaaagtttatcatttg 11244
to top
>emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in linkage group 20 Contains
              the gene for a novel protein similar to mouse and human
              integrin beta 1 binding protein 1 (ITGB1BP1), the gene for
              a novel protein similar to vertebrate development and
              differentiation enhancing factor 2 (DDEF2) and three CpG
              islands, complete sequence
          Length = 209698

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     agagtgaaggtttatcatttg 62
              |||||||||||||||||||||
Sbjct: 143579 agagtgaaggtttatcatttg 143599
to top
>gb|AC010306.6| Homo sapiens chromosome 5 clone CTB-45L16, complete sequence
          Length = 110695

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    tctccagcaatagatcttact 100
             |||||||||||||||||||||
Sbjct: 23501 tctccagcaatagatcttact 23481
to top
>emb|BX005205.17| Zebrafish DNA sequence from clone DKEY-210P14 in linkage group 16,
             complete sequence
          Length = 164219

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    agagtgaaggtttatcatttg 62
             |||||||||||||||||||||
Sbjct: 34093 agagtgaaggtttatcatttg 34113
to top
>emb|BX088529.6| Zebrafish DNA sequence from clone CH211-286H12, complete sequence
          Length = 178667

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    agagtgaaggtttatcatttg 62
             |||||||||||||||||||||
Sbjct: 26022 agagtgaaggtttatcatttg 26002
to top
>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence
          Length = 169417

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 466   aaagaaacttggtctgtcaaaatataaca 494
             ||||||||| |||||||||||||||||||
Sbjct: 96611 aaagaaact-ggtctgtcaaaatataaca 96638
to top
>emb|BX293553.4| Zebrafish DNA sequence from clone CH211-256J2 in linkage group 9,
             complete sequence
          Length = 74678

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    agagtgaaggtttatcatttg 62
             |||||||||||||||||||||
Sbjct: 18198 agagtgaaggtttatcatttg 18218
to top
>emb|BX248135.5| Zebrafish DNA sequence from clone CH211-106J4 in linkage group 17,
              complete sequence
          Length = 152463

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     agagtgaaggtttatcatttg 62
              |||||||||||||||||||||
Sbjct: 148641 agagtgaaggtttatcatttg 148661
to top
>gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosome 13, complete sequence
          Length = 205673

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 466    aaagaaacttggtctgtcaaaatataaca 494
              ||||||||| |||||||||||||||||||
Sbjct: 150812 aaagaaact-ggtctgtcaaaatataaca 150785
to top
>ref|XM_641914.1| Dictyostelium discoideum hypothetical protein (DDB0202354), partial
            mRNA
          Length = 8541

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 28   tgaaaatattaaaaagagtgaagg 51
            |||||||||||||||||| |||||
Sbjct: 6966 tgaaaatattaaaaagagagaagg 6989
to top
>ref|XM_629528.1| Dictyostelium discoideum TFIID subunit (DDB0231041), partial mRNA
          Length = 9015

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   ttgaaaatattaaaaagagt 46
            ||||||||||||||||||||
Sbjct: 1568 ttgaaaatattaaaaagagt 1587
to top
>ref|XM_414240.1| PREDICTED: Gallus gallus LOC415884 (LOC415884), mRNA
          Length = 1975

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 agatctcatcagcaaggatg 401
           ||||||||||||||||||||
Sbjct: 803 agatctcatcagcaaggatg 784
to top
>gb|AC110230.12| Mus musculus chromosome 6, clone RP23-54L18, complete sequence
          Length = 216521

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ttaacactgataatatgagt 214
              ||||||||||||||||||||
Sbjct: 192053 ttaacactgataatatgagt 192072
to top
>gb|AC112686.10| Mus musculus chromosome 6, clone RP23-354N21, complete sequence
          Length = 222603

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    ttaacactgataatatgagt 214
              ||||||||||||||||||||
Sbjct: 205049 ttaacactgataatatgagt 205030
to top
>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3,
             complete sequence
          Length = 194437

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    agagtgaaggtttatcattt 61
             ||||||||||||||||||||
Sbjct: 50141 agagtgaaggtttatcattt 50160
to top
>emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2, complete
              sequence
          Length = 223248

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     aaaagagtgaaggtttatcatttg 62
              |||||||||||||||||| |||||
Sbjct: 133371 aaaagagtgaaggtttataatttg 133348
to top
>emb|CR937050.2| Rattus norvegicus chromosome 5 BAC CH230-339J16, complete sequence
          Length = 163260

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    aacctgatgttggtttgtgg 346
              ||||||||||||||||||||
Sbjct: 130291 aacctgatgttggtttgtgg 130272
to top
>gb|AC122341.3| Mus musculus BAC clone RP23-355F8 from chromosome 15, complete sequence
          Length = 198612

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   ctgttttgcaaatcaacctg 332
             ||||||||||||||||||||
Sbjct: 93882 ctgttttgcaaatcaacctg 93901
to top
>ref|XM_815500.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506855.360) partial mRNA
          Length = 4866

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 393 gcaaggatgaggcaaattat 412
           ||||||||||||||||||||
Sbjct: 428 gcaaggatgaggcaaattat 447
to top
>gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, complete sequence
          Length = 141166

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    gtaagagatactgttttgca 322
              ||||||||||||||||||||
Sbjct: 131476 gtaagagatactgttttgca 131457
to top
>gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosome 7, complete sequence
          Length = 200983

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    gtaagagatactgttttgca 322
              ||||||||||||||||||||
Sbjct: 115511 gtaagagatactgttttgca 115492
to top
>emb|BX936327.3| Zebrafish DNA sequence from clone DKEY-21E10 in linkage group 3,
             complete sequence
          Length = 105845

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    agagtgaaggtttatcattt 61
             ||||||||||||||||||||
Sbjct: 91714 agagtgaaggtttatcattt 91733
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 448      atatcaatctataatgacaaagaa 471
                |||||||||| |||||||||||||
Sbjct: 13745049 atatcaatctttaatgacaaagaa 13745072
to top
>gb|AC084273.20| Mus musculus strain C57BL/6J chromosome 6 clone rp23-313e8, complete
              sequence
          Length = 182818

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    caggtaagagatactgtttt 319
              ||||||||||||||||||||
Sbjct: 123623 caggtaagagatactgtttt 123642
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 459     taatgacaaagaaacttggt 478
               ||||||||||||||||||||
Sbjct: 3893825 taatgacaaagaaacttggt 3893844
to top
>emb|BX005131.14| Zebrafish DNA sequence from clone DKEY-195B5 in linkage group 2,
             complete sequence
          Length = 147345

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    aaaagagtgaaggtttatcatttg 62
             |||||||||||||||||| |||||
Sbjct: 81315 aaaagagtgaaggtttataatttg 81338
to top
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 87778

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 448  atatcaatctataatgacaaagaa 471
            |||||||||| |||||||||||||
Sbjct: 8357 atatcaatctttaatgacaaagaa 8380
to top
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145118

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 448   atatcaatctataatgacaaagaa 471
             |||||||||| |||||||||||||
Sbjct: 78650 atatcaatctttaatgacaaagaa 78673
to top
>emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, complete sequence
          Length = 198368

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     aaaagagtgaaggtttatcatttg 62
              ||||||||||| ||||||||||||
Sbjct: 109816 aaaagagtgaaagtttatcatttg 109793
to top
>gb|AF218567.1|AF218567 Cryphonectria parasitica putative maturase (maturase) gene, complete
            cds; mitochondrial gene for mitochondrial product
          Length = 2385

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 255  tagatgcttttgatcctagcttca 278
            |||||||||||||||||| |||||
Sbjct: 1445 tagatgcttttgatcctaacttca 1468
to top
>dbj|AK073264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K01, full
            insert sequence
          Length = 2905

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 448  atatcaatctataatgacaaagaa 471
            |||||||||| |||||||||||||
Sbjct: 2022 atatcaatctttaatgacaaagaa 2045
to top
>dbj|AK071849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O04, full
           insert sequence
          Length = 1143

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 448 atatcaatctataatgacaaagaa 471
           |||||||||| |||||||||||||
Sbjct: 207 atatcaatctttaatgacaaagaa 230
to top
>emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in linkage group 5,
             complete sequence
          Length = 172861

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    aaaagagtgaaggtttatcatttg 62
             ||||||||||| ||||||||||||
Sbjct: 71072 aaaagagtgaaagtttatcatttg 71095
to top
>emb|BX255939.3| Zebrafish DNA sequence from clone DKEY-5G7 in linkage group 20, complete
              sequence
          Length = 168897

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 490    taacaagcagcttattagca 509
              ||||||||||||||||||||
Sbjct: 130920 taacaagcagcttattagca 130939
to top
>emb|CR555298.10| Zebrafish DNA sequence from clone CH211-25D12 in linkage group 11,
              complete sequence
          Length = 183135

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     aaaagagtgaaggtttatcatttg 62
              |||||||||||||||||| |||||
Sbjct: 158748 aaaagagtgaaggtttataatttg 158725
to top
>emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chromosome 2, complete
             sequence
          Length = 181372

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   catcagcaaggatgaggcaa 407
             ||||||||||||||||||||
Sbjct: 94948 catcagcaaggatgaggcaa 94967
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 448      atatcaatctataatgacaaagaa 471
                |||||||||| |||||||||||||
Sbjct: 13699329 atatcaatctttaatgacaaagaa 13699352
to top
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 155451

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 448   atatcaatctataatgacaaagaa 471
             |||||||||| |||||||||||||
Sbjct: 60708 atatcaatctttaatgacaaagaa 60731
to top
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH097M21, complete sequence
          Length = 131063

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   atcttgaaaatattaaaaag 43
            ||||||||||||||||||||
Sbjct: 9301 atcttgaaaatattaaaaag 9320
to top
>emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chromosome 4, complete
              sequence
          Length = 211998

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     cttgaaaatattaaaaagag 45
              ||||||||||||||||||||
Sbjct: 136076 cttgaaaatattaaaaagag 136095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,874,025
Number of Sequences: 3902068
Number of extensions: 5874025
Number of successful extensions: 98348
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 98100
Number of HSP's gapped (non-prelim): 230
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top