Clone Name | basdk04 |
---|---|
Clone Library Name | barley_pub |
>gb|BT017005.1| Zea mays clone EK07D2310A10.c mRNA sequence Length = 1053 Score = 555 bits (280), Expect = e-155 Identities = 418/464 (90%) Strand = Plus / Plus Query: 75 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 134 |||||||||| ||| | || |||||||||||||||||||| | || || |||||| Sbjct: 148 ccatgttcaataggatcttcgggaagcccaaggagcaggccgactccaatgctttggcca 207 Query: 135 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 194 || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| | |||| Sbjct: 208 ctctggacaagttaaatgagacacttgatatgctggagaagaaagaaaaggtgctggaga 267 Query: 195 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 254 |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 268 aaaaagcaaacgctgagcttgagagagccaaggagttctcgaaagcaaagaataaaagag 327 Query: 255 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 314 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 328 cggctatccaatccttgaagaggaaaaaactttatgagcaacaaattgagcagcttggaa 387 Query: 315 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 374 |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 388 attttcagttgagaatccatgatcagatgatcatgttagaagcagctaaagctacaacag 447 Query: 375 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 434 ||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||||||| Sbjct: 448 agactgttgatgcattgagaactggagctgcagctatgaaagcaatgcaaaaagcaacaa 507 Query: 435 atattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaac 494 | |||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||| Sbjct: 508 acattgatgatgtcgacaagaccatggatgaaattaacgaacagactgaaaacatgaaac 567 Query: 495 aaatacaagatgctctgtcagctcctcttggagcttctgctgat 538 |||| || |||||| ||||||||||||||||||||| ||||||| Sbjct: 568 aaattcaggatgctttgtcagctcctcttggagcttttgctgat 611
>ref|XM_506643.1| PREDICTED Oryza sativa (japonica cultivar-group), B1008E06.13 patrial mRNA Length = 1223 Score = 515 bits (260), Expect = e-143 Identities = 413/464 (89%) Strand = Plus / Plus Query: 75 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 134 |||||||||||||| | ||||| ||||||||||||||||| ||||| | ||| |||||| Sbjct: 238 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgctagtgcgttggcca 297 Query: 135 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 194 | | || |||||||| ||||| ||||| |||||||||||||| |||||||| ||||||| Sbjct: 298 cgcttgataagttaaatgagacccttgacatgctggagaagaaggagaaagtcttagaga 357 Query: 195 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 254 |||| |||| || || || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 358 aaaaggcagccgcagaactggagagggctaaggagttctcaaaagcaaagaataaaagag 417 Query: 255 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 314 ||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| |||| Sbjct: 418 cggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctaggga 477 Query: 315 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 374 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 acttccagttgagaattcatgatcagatgatcatgttagaagctgcaaaagctacgacag 537 Query: 375 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 434 | || || ||||| ||||||||||||||| |||||||||||| |||||||| || |||| Sbjct: 538 aaaccgttgatgctttgaggactggagctgcagctatgaaagcaatgcaaaaggcgacaa 597 Query: 435 atattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaac 494 |||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 598 atattgatgacgttgataagactatggatgaaattaatgaacagactgaaaacatgaaac 657 Query: 495 aaatacaagatgctctgtcagctcctcttggagcttctgctgat 538 |||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 658 aaatacaagatgctttgtcagcccctcttggagcatctgctgat 701
>dbj|AK065728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036O11, full insert sequence Length = 1223 Score = 515 bits (260), Expect = e-143 Identities = 413/464 (89%) Strand = Plus / Plus Query: 75 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 134 |||||||||||||| | ||||| ||||||||||||||||| ||||| | ||| |||||| Sbjct: 238 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgctagtgcgttggcca 297 Query: 135 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 194 | | || |||||||| ||||| ||||| |||||||||||||| |||||||| ||||||| Sbjct: 298 cgcttgataagttaaatgagacccttgacatgctggagaagaaggagaaagtcttagaga 357 Query: 195 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 254 |||| |||| || || || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 358 aaaaggcagccgcagaactggagagggctaaggagttctcaaaagcaaagaataaaagag 417 Query: 255 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 314 ||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| |||| Sbjct: 418 cggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctaggga 477 Query: 315 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 374 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 acttccagttgagaattcatgatcagatgatcatgttagaagctgcaaaagctacgacag 537 Query: 375 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 434 | || || ||||| ||||||||||||||| |||||||||||| |||||||| || |||| Sbjct: 538 aaaccgttgatgctttgaggactggagctgcagctatgaaagcaatgcaaaaggcgacaa 597 Query: 435 atattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaac 494 |||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 598 atattgatgacgttgataagactatggatgaaattaatgaacagactgaaaacatgaaac 657 Query: 495 aaatacaagatgctctgtcagctcctcttggagcttctgctgat 538 |||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 658 aaatacaagatgctttgtcagcccctcttggagcatctgctgat 701
>gb|BT016724.1| Zea mays clone Contig557 mRNA sequence Length = 833 Score = 507 bits (256), Expect = e-140 Identities = 412/464 (88%) Strand = Plus / Plus Query: 75 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 134 |||||||||||||| | || |||||||||||||||||||| || | | || |||||| Sbjct: 327 ccatgttcaacaggatcttcgggaagcccaaggagcaggccaactctagtgccttggcca 386 Query: 135 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 194 | | ||||||||||| |||||||||||||||||||||||||||||||| ||| | || | Sbjct: 387 cactcgacaagttaaatgagactcttgatatgctggagaagaaagagaaggtgctggaca 446 Query: 195 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 254 ||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 447 aaaaagcagccgctgagcttgagagagccaaggagttctccaaagctaagaataaaagag 506 Query: 255 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 314 ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| || | Sbjct: 507 cggctatccaatccttgaagaggaaaaaactttatgaacaacaaattgagcagctcggaa 566 Query: 315 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 374 |||| |||||||| || |||||||||||||||||||||||||| ||||||||||| || | Sbjct: 567 attttcagttgagaattcatgatcagatgatcatgttagaagcagctaaagctacaacgg 626 Query: 375 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 434 ||||||| ||||| ||||| ||||||||| |||||||||||| |||||||||||||||| Sbjct: 627 agactgttgatgcgttgagaactggagctgcagctatgaaagcaatgcaaaaagcaacaa 686 Query: 435 atattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaac 494 | |||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 687 acattgatgatgtcgacaagaccatggatgaaattaatgaacagactgaaaatatgaaac 746 Query: 495 aaatacaagatgctctgtcagctcctcttggagcttctgctgat 538 |||| ||||||||| || || || |||||||||||| ||||||| Sbjct: 747 aaattcaagatgctttgccaactgctcttggagcttatgctgat 790
>dbj|AK061983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A12, full insert sequence Length = 918 Score = 458 bits (231), Expect = e-126 Identities = 348/387 (89%) Strand = Plus / Plus Query: 152 gagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgag 211 ||||| ||||| |||||||||||||| |||||||| ||||||||||| |||| || || Sbjct: 3 gagacccttgacatgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaa 62 Query: 212 cttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattg 271 || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 63 ctggagagggctaaggagttctcaaaagcaaagaataaaagagcggctatccaatccttg 122 Query: 272 aagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatc 331 ||||| ||||| |||||||| || |||||||||||||| ||||| ||||||||||| || Sbjct: 123 aagagaaaaaagctttatgaacaacaaattgagcagctagggaacttccagttgagaatt 182 Query: 332 catgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattg 391 ||||||||||||||||||||||||||||| |||||||||||||| || || ||||| ||| Sbjct: 183 catgatcagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttg 242 Query: 392 aggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgac 451 |||||||||||| |||||||||||| |||||||| || |||||||||||||| || || Sbjct: 243 aggactggagctgcagctatgaaagcaatgcaaaaggcgacaaatattgatgacgttgat 302 Query: 452 aagactatggacgaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctg 511 ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||| || Sbjct: 303 aagactatggatgaaattaatgaacagactgaaaacatgaaacaaacacaagatgctttg 362 Query: 512 tcagctcctcttggagcttctgctgat 538 ||||| ||||||||||| ||||||||| Sbjct: 363 tcagcccctcttggagcatctgctgat 389
>gb|BT012766.1| Lycopersicon esculentum clone 113715R, mRNA sequence Length = 984 Score = 192 bits (97), Expect = 8e-46 Identities = 241/289 (83%) Strand = Plus / Plus Query: 213 ttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattga 272 |||||| |||||| || || ||| ||||||||| |||||||| || || || | |||| Sbjct: 197 ttgagaaggccaaagattttacaagagcaaagaacaaaagagctgcaatacagtgtttga 256 Query: 273 agaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatcc 332 ||||||| | || || || || ||||||||||||||||| ||||||||| | | |||| Sbjct: 257 agaggaagaggctctacgaacaacaaattgagcagcttggcaatttccagcttcgcatcc 316 Query: 333 atgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattga 392 ||||||||||||| ||| |||||| || |||||||| || || ||||| ||||| ||| Sbjct: 317 atgatcagatgataatgctagaaggcgcaaaagctacaactgaaactgttgatgctttgc 376 Query: 393 ggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgaca 452 ||||||||||| || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 377 ggactggagcttctgcaatgaaagcaatgcagaaagcaacaaatattgatgatgtagaca 436 Query: 453 agactatggacgaaattaatgaacagacagaaaacatgaaacaaataca 501 |||| ||||| ||||| |||||||||||||| || |||||||||||||| Sbjct: 437 agacaatggatgaaataaatgaacagacagagaatatgaaacaaataca 485
>gb|AY106783.1| Zea mays PCO103251 mRNA sequence Length = 1172 Score = 180 bits (91), Expect = 3e-42 Identities = 202/239 (84%) Strand = Plus / Plus Query: 236 aaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaactttatgagcag 295 ||||| |||||||||||||| || || || | ||||||||||||| ||| || ||||| Sbjct: 353 aaagccaagaataaaagagctgcaatacagtgcttgaagaggaaaagactatacgagcaa 412 Query: 296 caaattgagcagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaa 355 || |||||||||||||| ||||||||| | ||||| |||||||||||||| ||| | ||| Sbjct: 413 cagattgagcagcttggaaatttccagcttaggatacatgatcagatgattatgctggaa 472 Query: 356 gctgctaaagctacgacagagactgtggatgcattgaggactggagctaaagctatgaaa 415 || || |||||||| |||||||| |||||||||||||| |||||||| ||| |||||| Sbjct: 473 gcagcaaaagctacaacagagaccgtggatgcattgagaactggagcatcagcaatgaaa 532 Query: 416 gcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatga 474 || ||||| || ||||||||||||||||||| || || || ||||| ||||||||||| Sbjct: 533 gctatgcataagtcaacaaatattgatgatgttgataaaaccatggatgaaattaatga 591
>dbj|AK070667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056L17, full insert sequence Length = 1366 Score = 174 bits (88), Expect = 2e-40 Identities = 265/324 (81%) Strand = Plus / Plus Query: 151 cgagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctga 210 |||||||||||| |||||||| |||||||| || || ||| ||| ||||| | ||| Sbjct: 305 cgagactcttgaaatgctggaaaagaaagaaaatttgctagtgaagaaagcgaatcttga 364 Query: 211 gcttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcatt 270 | |||||| ||||||| ||| | ||||| |||||||||||||| || || |||| || Sbjct: 365 ggttgagaaggccaagaccttcactaaagcgaagaataaaagagctgcaatacaatgctt 424 Query: 271 gaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggat 330 |||||||| | | | |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 425 aaagaggaagagattatatgagcaacagattgagcagcttggtaatttccaattaaggat 484 Query: 331 ccatgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcatt 390 |||||||||||||| ||| | |||| ||| || ||||| ||||||||||| |||||||| Sbjct: 485 acatgatcagatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcatt 544 Query: 391 gaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcga 450 ||| |||||||| || |||||||| ||||| ||||| ||||||||||| || || || Sbjct: 545 gagaactggagcatcggcgatgaaagcaatgcacaaagcgacaaatattgacgacgttga 604 Query: 451 caagactatggacgaaattaatga 474 |||||| ||||| ||||||||||| Sbjct: 605 caagacaatggatgaaattaatga 628
>dbj|AK060097.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G05, full insert sequence Length = 1139 Score = 174 bits (88), Expect = 2e-40 Identities = 265/324 (81%) Strand = Plus / Plus Query: 151 cgagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctga 210 |||||||||||| |||||||| |||||||| || || ||| ||| ||||| | ||| Sbjct: 322 cgagactcttgaaatgctggaaaagaaagaaaatttgctagtgaagaaagcgaatcttga 381 Query: 211 gcttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcatt 270 | |||||| ||||||| ||| | ||||| |||||||||||||| || || |||| || Sbjct: 382 ggttgagaaggccaagaccttcactaaagcgaagaataaaagagctgcaatacaatgctt 441 Query: 271 gaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggat 330 |||||||| | | | |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 442 aaagaggaagagattatatgagcaacagattgagcagcttggtaatttccaattaaggat 501 Query: 331 ccatgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcatt 390 |||||||||||||| ||| | |||| ||| || ||||| ||||||||||| |||||||| Sbjct: 502 acatgatcagatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcatt 561 Query: 391 gaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcga 450 ||| |||||||| || |||||||| ||||| ||||| ||||||||||| || || || Sbjct: 562 gagaactggagcatcggcgatgaaagcaatgcacaaagcgacaaatattgacgacgttga 621 Query: 451 caagactatggacgaaattaatga 474 |||||| ||||| ||||||||||| Sbjct: 622 caagacaatggatgaaattaatga 645
>ref|NM_127541.2| Arabidopsis thaliana unknown protein AT2G19830 mRNA, complete cds Length = 928 Score = 172 bits (87), Expect = 8e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 254 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 313 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 304 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 363 Query: 314 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 373 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 364 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 423 Query: 374 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 433 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 424 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 483 Query: 434 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 493 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 484 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 543 Query: 494 caaatacaaga 504 || || ||||| Sbjct: 544 cagatccaaga 554
>gb|AY079421.1| Arabidopsis thaliana putative copia retroelement pol polyprotein (At2g19830) mRNA, complete cds Length = 673 Score = 172 bits (87), Expect = 8e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 254 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 313 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 175 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 234 Query: 314 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 373 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 235 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 294 Query: 374 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 433 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 295 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 354 Query: 434 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 493 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 355 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 414 Query: 494 caaatacaaga 504 || || ||||| Sbjct: 415 cagatccaaga 425
>gb|AY045911.1| Arabidopsis thaliana putative copia retroelement pol polyprotein (At2g19830) mRNA, complete cds Length = 946 Score = 172 bits (87), Expect = 8e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 254 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 313 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 306 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 365 Query: 314 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 373 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 366 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 425 Query: 374 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 433 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 426 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 485 Query: 434 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 493 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 486 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 545 Query: 494 caaatacaaga 504 || || ||||| Sbjct: 546 cagatccaaga 556
>emb|BX818948.1|CNS0A9WC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 829 Score = 172 bits (87), Expect = 8e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 254 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 313 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 208 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 267 Query: 314 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 373 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 268 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 327 Query: 374 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 433 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 328 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 387 Query: 434 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 493 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 388 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 447 Query: 494 caaatacaaga 504 || || ||||| Sbjct: 448 cagatccaaga 458
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 433 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 492 |||||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 5050591 aaatattgatgacgttgataagactatggatgaaattaatgaacagactgaaaacatgaa 5050650 Query: 493 acaaatacaagatgctctgtcagctcctcttggagcttctgctgat 538 |||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 5050651 acaaatacaagatgctttgtcagcccctcttggagcatctgctgat 5050696 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 153 agactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagc 212 |||| ||||| |||||||||||||| |||||||| ||||||||||| |||| || || | Sbjct: 5049975 agacccttgacatgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaac 5050034 Query: 213 ttgagagggccaaggagttctcaaaagcaaagaataaaagag 254 | |||||||| ||||||||||||||||||||||||||||||| Sbjct: 5050035 tggagagggctaaggagttctcaaaagcaaagaataaaagag 5050076 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 338 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 397 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 5050391 cagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggact 5050450 Query: 398 ggagctaaagctatgaaagcgatgcaaaa 426 |||||| |||||||||||| |||||||| Sbjct: 5050451 ggagctgcagctatgaaagcaatgcaaaa 5050479 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 253 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 312 ||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 5050226 agcggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctagg 5050285 Query: 313 gaatttccagttgaggatccatgatcag 340 ||| ||||||||||| || ||||||||| Sbjct: 5050286 gaacttccagttgagaattcatgatcag 5050313 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 75 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgc 120 |||||||||||||| | ||||| ||||||||||||||||| ||||| Sbjct: 5049712 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgc 5049757
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 433 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 492 |||||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 52708 aaatattgatgacgttgataagactatggatgaaattaatgaacagactgaaaacatgaa 52767 Query: 493 acaaatacaagatgctctgtcagctcctcttggagcttctgctgat 538 |||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 52768 acaaatacaagatgctttgtcagcccctcttggagcatctgctgat 52813 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 153 agactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagc 212 |||| ||||| |||||||||||||| |||||||| ||||||||||| |||| || || | Sbjct: 52092 agacccttgacatgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaac 52151 Query: 213 ttgagagggccaaggagttctcaaaagcaaagaataaaagag 254 | |||||||| ||||||||||||||||||||||||||||||| Sbjct: 52152 tggagagggctaaggagttctcaaaagcaaagaataaaagag 52193 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 338 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 397 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 52508 cagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggact 52567 Query: 398 ggagctaaagctatgaaagcgatgcaaaa 426 |||||| |||||||||||| |||||||| Sbjct: 52568 ggagctgcagctatgaaagcaatgcaaaa 52596 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 253 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 312 ||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 52343 agcggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctagg 52402 Query: 313 gaatttccagttgaggatccatgatcag 340 ||| ||||||||||| || ||||||||| Sbjct: 52403 gaacttccagttgagaattcatgatcag 52430 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 75 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgc 120 |||||||||||||| | ||||| ||||||||||||||||| ||||| Sbjct: 51829 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgc 51874
>gb|BT013152.1| Lycopersicon esculentum clone 134156F, mRNA sequence Length = 1035 Score = 139 bits (70), Expect = 1e-29 Identities = 283/354 (79%) Strand = Plus / Plus Query: 140 gacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaa 199 ||||||||||||||||||||||| ||||| ||||| || ||||| || ||| ||| || Sbjct: 158 gacaagttaaacgagactcttgagatgcttgagaaaaaggagaaggttttactgaagaag 217 Query: 200 gcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagagcggct 259 || | |||||| |||| | || ||||| || | | |||||| || ||||| || || Sbjct: 218 gctgcagctgaggttgaaaaagcaaaggaatttactagagcaaaaaacaaaagggctgca 277 Query: 260 atccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttc 319 || |||| ||||| ||||||| ||||| ||||||||||| |||||||| || || ||| Sbjct: 278 atacaatgtttgaaaaggaaaaggctttacgagcagcaaatcgagcagctcggaaacttc 337 Query: 320 cagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacagagact 379 || ||| | || |||||||||||||| |||||||||| ||| ||||| || || |||||| Sbjct: 338 caattgcgtattcatgatcagatgataatgttagaaggtgcaaaagccacaacggagact 397 Query: 380 gtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatatt 439 || ||||| || || |||||||| || |||||||| |||||||| ||||| |||||| Sbjct: 398 gttgatgctttaagaactggagcagctgcaatgaaagctatgcaaaaggcaacgaatatt 457 Query: 440 gatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 493 || ||||||||||| || ||||| || || ||||| ||||| || || |||||| Sbjct: 458 gacgatgtcgacaaaacaatggatgagatcaatgagcagactgagaatatgaaa 511
>ref|NM_119060.3| Arabidopsis thaliana unknown protein AT4G29160 transcript variant AT4G29160.1 mRNA, complete cds Length = 1007 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 305 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 364 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 345 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 404 Query: 365 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 424 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 405 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 464 Query: 425 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 484 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 465 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 524 Query: 485 aacatgaaacaaatacaaga 504 ||||||||||| || ||||| Sbjct: 525 aacatgaaacagatccaaga 544
>ref|NM_202906.1| Arabidopsis thaliana unknown protein AT4G29160 transcript variant AT4G29160.2 mRNA, complete cds Length = 1350 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 305 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 364 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 688 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 747 Query: 365 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 424 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 748 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 807 Query: 425 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 484 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 808 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 867 Query: 485 aacatgaaacaaatacaaga 504 ||||||||||| || ||||| Sbjct: 868 aacatgaaacagatccaaga 887
>gb|AY072490.1| Arabidopsis thaliana putative protein (At4g29160; F19B15.190) mRNA, complete cds Length = 782 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 305 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 364 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 223 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 282 Query: 365 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 424 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 283 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 342 Query: 425 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 484 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 343 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 402 Query: 485 aacatgaaacaaatacaaga 504 ||||||||||| || ||||| Sbjct: 403 aacatgaaacagatccaaga 422
>gb|AY042853.1| Arabidopsis thaliana putative protein (F19B15.190) mRNA, complete cds Length = 942 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 305 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 364 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 328 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 387 Query: 365 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 424 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 388 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 447 Query: 425 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 484 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 448 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 507 Query: 485 aacatgaaacaaatacaaga 504 ||||||||||| || ||||| Sbjct: 508 aacatgaaacagatccaaga 527
>gb|AY088519.1| Arabidopsis thaliana clone 7471 mRNA, complete sequence Length = 956 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 305 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 364 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 320 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 379 Query: 365 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 424 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 380 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 439 Query: 425 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 484 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 440 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 499 Query: 485 aacatgaaacaaatacaaga 504 ||||||||||| || ||||| Sbjct: 500 aacatgaaacagatccaaga 519
>gb|BT016875.1| Zea mays clone Contig708 mRNA sequence Length = 740 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 458 atggacgaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtcagct 517 ||||| ||||||||||||||||| ||||| ||||||||||| ||||||||| ||||| || Sbjct: 740 atggatgaaattaatgaacagactgaaaatatgaaacaaattcaagatgctttgtcaact 681 Query: 518 cctcttggagcttctgctgat 538 ||||||||||||||||||||| Sbjct: 680 cctcttggagcttctgctgat 660
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 338 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 397 |||||||| |||||||||| ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 64719 cagatgattatgttagaaggtgctaaagcaacaacagagactgtagatgctttgaggact 64778 Query: 398 ggagctaaagctatgaaagcgatgcaaaaagcaac 432 |||||| || |||||||| ||||| |||||||| Sbjct: 64779 ggagcttctgcaatgaaagctatgcagaaagcaac 64813 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 437 attgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaacaa 496 ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||||| Sbjct: 64915 attgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaacag 64974 Query: 497 atacaaga 504 || ||||| Sbjct: 64975 atccaaga 64982 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Plus Query: 253 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 312 ||||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| || Sbjct: 64540 agcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcgg 64599 Query: 313 gaatttccag 322 |||||||||| Sbjct: 64600 gaatttccag 64609
>emb|BX827870.1|CNS0A30O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 85.7 bits (43), Expect = 1e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 305 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 364 |||||||||||||||||| | | || |||||||| ||||| ||||||| || ||| ||| Sbjct: 689 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagcaggtgcaaaa 748 Query: 365 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 424 || || || || ||||| ||||||||||| | ||||||| || || || | ||||| Sbjct: 749 gcaacaaccgacactgttgatgcattgagcagtggagcttctgcaatcaaggaaatgcag 808 Query: 425 aaagcaacaaatattgatgatgtcgacaagactatggac 463 ||||||||||||||||||||||| || ||||| |||||| Sbjct: 809 aaagcaacaaatattgatgatgtggataagaccatggac 847
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 338 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 397 |||||||| |||||||||| ||| ||||| || || || ||||| ||||||||||||| | Sbjct: 109769 cagatgattatgttagaaggtgcaaaagcaacaaccgaaactgttgatgcattgaggagt 109828 Query: 398 ggagctaaagctatgaaagcgatgcaaaaagcaac 432 |||||| || ||||| || ||||| |||||||| Sbjct: 109829 ggagcttctgcaatgaaggcaatgcagaaagcaac 109863 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 433 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 492 ||||||||||||||| || ||||| |||||||| || ||||| || || || |||||||| Sbjct: 110034 aaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgagaacatgaa 110093 Query: 493 acaaatacaaga 504 ||| || ||||| Sbjct: 110094 acagatccaaga 110105
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 338 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 397 |||||||| |||||||||| ||| ||||| || || || ||||| ||||||||||||| | Sbjct: 93296 cagatgattatgttagaaggtgcaaaagcaacaaccgaaactgttgatgcattgaggagt 93355 Query: 398 ggagctaaagctatgaaagcgatgcaaaaagcaac 432 |||||| || ||||| || ||||| |||||||| Sbjct: 93356 ggagcttctgcaatgaaggcaatgcagaaagcaac 93390 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 433 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 492 ||||||||||||||| || ||||| |||||||| || ||||| || || || |||||||| Sbjct: 93561 aaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgagaacatgaa 93620 Query: 493 acaaatacaaga 504 ||| || ||||| Sbjct: 93621 acagatccaaga 93632
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 287 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgat 345 |||||||| || |||||||||||||| |||||||| || ||||| ||||||||| |||| Sbjct: 23837717 tatgagcaacagattgagcagcttggtaatttccaattaaggatacatgatcaggtgat 23837775 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 339 agatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactg 398 ||||||| ||| | |||| ||| || ||||| ||||||||||| ||||||||||| |||| Sbjct: 23837865 agatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcattgagaactg 23837924 Query: 399 gagc 402 |||| Sbjct: 23837925 gagc 23837928 Score = 44.1 bits (22), Expect = 0.47 Identities = 37/42 (88%) Strand = Plus / Plus Query: 433 aaatattgatgatgtcgacaagactatggacgaaattaatga 474 ||||||||| || || |||||||| ||||| ||||||||||| Sbjct: 23838659 aaatattgacgacgttgacaagacaatggatgaaattaatga 23838700
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 287 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgat 345 |||||||| || |||||||||||||| |||||||| || ||||| ||||||||| |||| Sbjct: 77382 tatgagcaacagattgagcagcttggtaatttccaattaaggatacatgatcaggtgat 77440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 339 agatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactg 398 ||||||| ||| | |||| ||| || ||||| ||||||||||| ||||||||||| |||| Sbjct: 77530 agatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcattgagaactg 77589 Query: 399 gagc 402 |||| Sbjct: 77590 gagc 77593 Score = 44.1 bits (22), Expect = 0.47 Identities = 37/42 (88%) Strand = Plus / Plus Query: 433 aaatattgatgatgtcgacaagactatggacgaaattaatga 474 ||||||||| || || |||||||| ||||| ||||||||||| Sbjct: 78324 aaatattgacgacgttgacaagacaatggatgaaattaatga 78365
>gb|AF111147.1|AF111147 Ipomoea cordatotriloba granule-bound starch synthase (waxy) gene, partial cds Length = 513 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 289 tgagcagcaaattgagcagcttg 311 ||||||||||||||||||||||| Sbjct: 393 tgagcagcaaattgagcagcttg 415
>gb|AF111145.1|AF111145 Ipomoea lacunosa granule-bound starch synthase (waxy) gene, partial cds Length = 585 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 289 tgagcagcaaattgagcagcttg 311 ||||||||||||||||||||||| Sbjct: 434 tgagcagcaaattgagcagcttg 456
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 ctcttgatatgctggagaagaa 177 |||||||||||||||||||||| Sbjct: 7321231 ctcttgatatgctggagaagaa 7321252 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 agactcttgatatgctggagaagaaagag 181 ||||||| || |||||||||||||||||| Sbjct: 1013090 agactctagaaatgctggagaagaaagag 1013062
>dbj|AK070935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B07, full insert sequence Length = 967 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 152 gagactcttgatatgctggagaagaaagag 181 |||||||| || |||||||||||||||||| Sbjct: 271 gagactctagaaatgctggagaagaaagag 300
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 ctcttgatatgctggagaagaa 177 |||||||||||||||||||||| Sbjct: 7321110 ctcttgatatgctggagaagaa 7321131 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 agactcttgatatgctggagaagaaagag 181 ||||||| || |||||||||||||||||| Sbjct: 1013090 agactctagaaatgctggagaagaaagag 1013062
>emb|AL732648.3|CNS08C9N Oryza sativa chromosome 12, . BAC OSJNBb0020J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133575 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 ctcttgatatgctggagaagaa 177 |||||||||||||||||||||| Sbjct: 36241 ctcttgatatgctggagaagaa 36262
>gb|AC170188.2| Mus musculus BAC clone RP24-195M20 from chromosome 13, complete sequence Length = 165687 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 45765 aaagagaaagtgttagtgaaaaaag 45741
>gb|BC019183.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:5010155), containing frame-shift errors Length = 2219 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1794 aaagagaaagtgttagtgaaaaaag 1818
>emb|Z82271.1|CEF54E12 Caenorhabditis elegans Cosmid F54E12, complete sequence Length = 13877 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tggagaagaaagagaaagtgt 188 ||||||||||||||||||||| Sbjct: 173 tggagaagaaagagaaagtgt 153
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 agactcttgatatgctggagaagaaagag 181 ||||||| || |||||||||||||||||| Sbjct: 79340 agactctagaaatgctggagaagaaagag 79312
>gb|AC131888.1| Homo sapiens chromosome 16 clone RP11-626G3, complete sequence Length = 162957 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 agaaagagaaagtgttagagaaaaa 198 |||||||||||| |||||||||||| Sbjct: 70689 agaaagagaaagagttagagaaaaa 70665
>ref|NM_008634.1| Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA Length = 8818 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1800 aaagagaaagtgttagtgaaaaaag 1824
>dbj|AK143169.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130206H16 product:microtubule-associated protein 1 B, full insert sequence Length = 1759 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1595 aaagagaaagtgttagtgaaaaaag 1619
>dbj|AK157749.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130017F22 product:microtubule-associated protein 1 B, full insert sequence Length = 1849 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1634 aaagagaaagtgttagtgaaaaaag 1658
>gb|AC111220.6| Rattus norvegicus Chr BAC CH230-122K11 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 237466 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 aaaaagcaacaaatattgatg 443 ||||||||||||||||||||| Sbjct: 198906 aaaaagcaacaaatattgatg 198926
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aaaagcaacaaatattgatga 444 ||||||||||||||||||||| Sbjct: 525511 aaaagcaacaaatattgatga 525491
>gb|AC109037.6| Rattus norvegicus 18 BAC CH230-178G23 (Children's Hospital Oakland Research Institute) complete sequence Length = 208650 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 aaaaagcaacaaatattgatg 443 ||||||||||||||||||||| Sbjct: 147112 aaaaagcaacaaatattgatg 147092
>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence Length = 171058 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aaaagcaacaaatattgatga 444 ||||||||||||||||||||| Sbjct: 23246 aaaagcaacaaatattgatga 23226
>gb|BC037105.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:5366028), partial cds Length = 2133 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1807 aaagagaaagtgttagtgaaaaaag 1831
>dbj|AK038690.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230055D22 product:microtubule-associated protein 1 B, full insert sequence Length = 1191 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 683 aaagagaaagtgttagtgaaaaaag 707
>gb|BC078457.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:30360897) Length = 2112 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1788 aaagagaaagtgttagtgaaaaaag 1812
>gb|BC052016.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:6404340) Length = 2112 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1783 aaagagaaagtgttagtgaaaaaag 1807
>gb|BC046287.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:6468810) Length = 2110 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1783 aaagagaaagtgttagtgaaaaaag 1807
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 agactcttgatatgctggagaagaaagag 181 ||||||| || |||||||||||||||||| Sbjct: 1081058 agactctagaaatgctggagaagaaagag 1081030
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 aatctcgactcctccgccgcc 40 ||||||||||||||||||||| Sbjct: 9180712 aatctcgactcctccgccgcc 9180692
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aaaagcaacaaatattgatga 444 ||||||||||||||||||||| Sbjct: 552782 aaaagcaacaaatattgatga 552762
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 aatctcgactcctccgccgcc 40 ||||||||||||||||||||| Sbjct: 81094 aatctcgactcctccgccgcc 81074
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in Acinetobacter baumannii Length = 100001 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaggtgccaccatgttcaaca 86 ||||||||||||||||||||| Sbjct: 84763 gaggtgccaccatgttcaaca 84783
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 agactcttgatatgctggagaagaaagag 181 ||||||| || |||||||||||||||||| Sbjct: 1078779 agactctagaaatgctggagaagaaagag 1078751
>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 agactcttgatatgctggagaagaaagag 181 ||||||| || |||||||||||||||||| Sbjct: 8361 agactctagaaatgctggagaagaaagag 8333
>gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, complete sequence Length = 242105 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 225690 aaagagaaagtgttagtgaaaaaag 225714
>emb|X51396.1|MMMAP1B Mus musculus mRNA for microtubule-associated protein 1B (MAP1B gene) Length = 8818 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 aaagagaaagtgttagagaaaaaag 200 |||||||||||||||| |||||||| Sbjct: 1800 aaagagaaagtgttagtgaaaaaag 1824
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 tctcaaaagcaaagaataaaagag 254 |||||||||||||||| ||||||| Sbjct: 13899 tctcaaaagcaaagaacaaaagag 13876
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 atgaaagcgatgcaaaaagc 429 |||||||||||||||||||| Sbjct: 391070 atgaaagcgatgcaaaaagc 391051
>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence Length = 198404 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aaaagcaaagaataaaagag 254 |||||||||||||||||||| Sbjct: 163290 aaaagcaaagaataaaagag 163309
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence Length = 202580 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 tccatgatcagatgatcatg 349 |||||||||||||||||||| Sbjct: 40660 tccatgatcagatgatcatg 40679
>gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, complete sequence Length = 213628 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tcaaaagcaaagaataaaag 252 |||||||||||||||||||| Sbjct: 200193 tcaaaagcaaagaataaaag 200212
>ref|XM_742552.1| Aspergillus fumigatus Af293 DEAH-box RNA helicase (Afu6g04330) partial mRNA Length = 3636 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 tcagctcctcttggagcttctgct 535 ||||||||||| |||||||||||| Sbjct: 148 tcagctcctctcggagcttctgct 125
>gb|AY465182.1| Nematostella vectensis tropomyosin mRNA, complete cds Length = 1175 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 gctgagcttgagagggccaaggag 229 ||||||||||||| |||||||||| Sbjct: 725 gctgagcttgagaaggccaaggag 748
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 tccatgatcagatgatcatg 349 |||||||||||||||||||| Sbjct: 204375 tccatgatcagatgatcatg 204394
>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence Length = 184032 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 aaaacatgaaacaaatacaa 502 |||||||||||||||||||| Sbjct: 146731 aaaacatgaaacaaatacaa 146712
>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence Length = 149166 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 tgcaaaaagcaacaaatatt 439 |||||||||||||||||||| Sbjct: 138005 tgcaaaaagcaacaaatatt 138024
>gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 tgcaaaaagcaacaaatatt 439 |||||||||||||||||||| Sbjct: 88358 tgcaaaaagcaacaaatatt 88377
>emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chromosome 6q25.1-25.3 Contains a high mobility group (nonhistone chromosomal) protein 4 (HMG4) pseudogene, complete sequence Length = 156667 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 attaatgaacagacagaaaa 486 |||||||||||||||||||| Sbjct: 141338 attaatgaacagacagaaaa 141357
>gb|AC163999.3| Mus musculus chromosome 15, clone RP24-387E19, complete sequence Length = 163830 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tgatatgctggagaagaaag 179 |||||||||||||||||||| Sbjct: 68600 tgatatgctggagaagaaag 68581
>gb|AY954921.1| Mythimna unipuncta farnesyl diphosphate synthase mRNA, complete cds Length = 1862 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atgctggagaagaaagagaa 183 |||||||||||||||||||| Sbjct: 443 atgctggagaagaaagagaa 462
>emb|AL844494.41| Mouse DNA sequence from clone RP23-304I1 on chromosome 4, complete sequence Length = 147961 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 93311 tgtcagctcctcttggagct 93292
>emb|BX548253.31| Mouse DNA sequence from clone RP23-382I12 on chromosome 4, complete sequence Length = 73646 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 6966 tgtcagctcctcttggagct 6985
>emb|BX666061.27| Mouse DNA sequence from clone RP24-427A22 on chromosome 4, complete sequence Length = 208482 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 117292 tgtcagctcctcttggagct 117273 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 1801 tgtcagctcctcttggagct 1820
>emb|AL824709.35| Mouse DNA sequence from clone RP23-388P16 on chromosome 4, complete sequence Length = 211610 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 123860 tgtcagctcctcttggagct 123879 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 27537 tgtcagctcctcttggagct 27518
>gb|AC087559.69| Mus musculus strain C57BL/6J clone rp23-355o11 map 4, complete sequence Length = 227966 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 175296 tgtcagctcctcttggagct 175277 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 59802 tgtcagctcctcttggagct 59821
>dbj|AK001582.1| Homo sapiens cDNA FLJ10720 fis, clone NT2RP3001116 Length = 3591 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aaagagaaagtgttagagaa 195 |||||||||||||||||||| Sbjct: 1666 aaagagaaagtgttagagaa 1647
>gb|AC079464.5| Homo sapiens chromosome 5 clone CTB-12O2, complete sequence Length = 55687 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aaagagaaagtgttagagaa 195 |||||||||||||||||||| Sbjct: 21439 aaagagaaagtgttagagaa 21420
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ttgatatgctggagaagaaagaga 182 ||||| |||||||||||||||||| Sbjct: 121823 ttgatgtgctggagaagaaagaga 121800
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 attgaagaggaaaaaacttt 287 |||||||||||||||||||| Sbjct: 20461 attgaagaggaaaaaacttt 20480
>gb|AC104059.5| Homo sapiens BAC clone RP13-514E23 from 4, complete sequence Length = 165223 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 catgaaacaaatacaagatgctct 510 ||||||||||||| |||||||||| Sbjct: 65589 catgaaacaaatagaagatgctct 65566
>gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete sequence Length = 82505 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 aagagaaagtgttagagaaa 196 |||||||||||||||||||| Sbjct: 36202 aagagaaagtgttagagaaa 36221
>gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence Length = 169540 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atgctggagaagaaagagaa 183 |||||||||||||||||||| Sbjct: 1471 atgctggagaagaaagagaa 1490
>gb|AC149502.2| Xenopus tropicalis clone CH216-11H14, complete sequence Length = 196315 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 agaaagtgttagagaaaaaagcag 203 ||||||||||||||||| |||||| Sbjct: 91128 agaaagtgttagagaaagaagcag 91105
>dbj|AK048701.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230011E24 product:unclassifiable, full insert sequence Length = 3228 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 350 tgtcagctcctcttggagct 331
>emb|BX649314.6| Zebrafish DNA sequence from clone DKEYP-111A3 in linkage group 23, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 aaaaagcaacaaatattgat 442 |||||||||||||||||||| Sbjct: 117243 aaaaagcaacaaatattgat 117262
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cagctcctcttggagcttct 532 |||||||||||||||||||| Sbjct: 7192137 cagctcctcttggagcttct 7192156
>emb|BX820442.1|CNS0A9L1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 40.1 bits (20), Expect = 7.3 Identities = 92/116 (79%) Strand = Plus / Plus Query: 287 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgatc 346 |||||||| ||| |||| ||||| |||||| ||||| | | || |||||||| || ||| Sbjct: 246 tatgagcaacaagttgaacagctcgggaatgtccagctccgtattcatgatcaaatcatc 305 Query: 347 atgttagaagctgctaaagctacgacagagactgtggatgcattgaggactggagc 402 | | |||| |||||| || || ||||||| ||| ||||| || ||||||||||| Sbjct: 306 ctctccgaaggtgctaacgcaacaacagagaatgtagatgcgtttaggactggagc 361
>gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complete sequence Length = 167941 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aacaaatattgatgatgtcg 449 |||||||||||||||||||| Sbjct: 128374 aacaaatattgatgatgtcg 128355
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atgctggagaagaaagagaa 183 |||||||||||||||||||| Sbjct: 171199 atgctggagaagaaagagaa 171218
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cagctcctcttggagcttct 532 |||||||||||||||||||| Sbjct: 92074 cagctcctcttggagcttct 92093
>gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, complete sequence Length = 203229 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tcaaaagcaaagaataaaag 252 |||||||||||||||||||| Sbjct: 169694 tcaaaagcaaagaataaaag 169675
>emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 in linkage group 18, complete sequence Length = 164570 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 atgcaaaaagcaacaaatattgat 442 ||||||||||||| |||||||||| Sbjct: 147206 atgcaaaaagcaataaatattgat 147183
>gb|AC090655.63| Mus musculus strain C57BL/6J clone rp23-382i12 map 4, complete sequence Length = 264975 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 200175 tgtcagctcctcttggagct 200156 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 113229 tgtcagctcctcttggagct 113248
>gb|AF111141.1|AF111141 Ipomoea gracilis granule-bound starch synthase (waxy) gene, partial cds Length = 593 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tgagcagcaaattgagcagcttgg 312 ||||||||| |||||||||||||| Sbjct: 438 tgagcagcagattgagcagcttgg 461
>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete sequences Length = 215225 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggagaagaaagagaaagtgt 188 |||||||||||||||||||| Sbjct: 88655 ggagaagaaagagaaagtgt 88674
>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence Length = 170192 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 atgaaagcgatgcaaaaagcaaca 433 ||||||||||||||| |||||||| Sbjct: 85359 atgaaagcgatgcaagaagcaaca 85382
>emb|AL772334.16| Mouse DNA sequence from clone RP23-411B7 on chromosome 4, complete sequence Length = 150841 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgtcagctcctcttggagct 529 |||||||||||||||||||| Sbjct: 22245 tgtcagctcctcttggagct 22226
>gb|U17896.1|XMU17896 Xiphophorus maculatus ERCC2/XPD gene, complete cds Length = 16840 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 aattaatgaacagacagaaaacat 489 |||||||||||||| ||||||||| Sbjct: 3369 aattaatgaacagaaagaaaacat 3392
>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gctggagaagaaagagaaag 185 |||||||||||||||||||| Sbjct: 132583 gctggagaagaaagagaaag 132602
>emb|AL805959.11| Mouse DNA sequence from clone RP23-391H10 on chromosome 2, complete sequence Length = 217595 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 gctctgtcagctcctcttgg 525 |||||||||||||||||||| Sbjct: 42633 gctctgtcagctcctcttgg 42652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,571,090 Number of Sequences: 3902068 Number of extensions: 6571090 Number of successful extensions: 147476 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 146756 Number of HSP's gapped (non-prelim): 718 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)