>gb|AC146424.3| Pan troglodytes BAC clone RP43-26H22 from 7, complete sequence
          Length = 195194

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 69    ttgcccttctgtctactcctgt 90
             ||||||||||||||||||||||
Sbjct: 75114 ttgcccttctgtctactcctgt 75093

>gb|AC145771.1| Pan troglodytes BAC clone RP43-14A5 from 7, complete sequence
          Length = 155040

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 69     ttgcccttctgtctactcctgt 90
              ||||||||||||||||||||||
Sbjct: 154842 ttgcccttctgtctactcctgt 154821

>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence
          Length = 203437

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     ttgcccttctgtctactcctgttg 92
              ||||||||||||||||| ||||||
Sbjct: 199946 ttgcccttctgtctactgctgttg 199923

>gb|AC166347.2| Mus musculus BAC clone RP24-87G12 from chromosome 6, complete sequence
          Length = 193181

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     tactcctgttgctgctcgtcagcc 105
              ||||||||||||||||| ||||||
Sbjct: 112854 tactcctgttgctgctcctcagcc 112877

>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence
          Length = 228402

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     ttgcccttctgtctactcctgttg 92
              ||||||||||||||||| ||||||
Sbjct: 144376 ttgcccttctgtctactgctgttg 144353

>gb|AC141891.3| Mus musculus BAC clone RP23-378A8 from 6, complete sequence
          Length = 152261

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    tactcctgttgctgctcgtcagcc 105
             ||||||||||||||||| ||||||
Sbjct: 47820 tactcctgttgctgctcctcagcc 47797

>gb|U37008.1|MXU37008 Myxococcus xanthus socD (socD500 allele) and kefC genes, complete cds
          Length = 3780

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 85   tcctgttgctgctcgtcagcctgg 108
            ||||||||||| ||||||||||||
Sbjct: 2090 tcctgttgctgttcgtcagcctgg 2113

>ref|XM_979488.1| PREDICTED: Mus musculus similar to alpha 3 type VI collagen isoform 1
            precursor (LOC675101), mRNA
          Length = 2130

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 91   tgctgctcgtcagcctggg 109
            |||||||||||||||||||
Sbjct: 1532 tgctgctcgtcagcctggg 1550

>gb|AC121826.3| Mus musculus BAC clone RP23-470O13 from chromosome 3, complete sequence
          Length = 187184

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    tgggcttaggactgagatt 70
             |||||||||||||||||||
Sbjct: 46270 tgggcttaggactgagatt 46288

>ref|XM_696282.1| PREDICTED: Danio rerio similar to cryopyrin isoform b (LOC572555),
            partial mRNA
          Length = 2768

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 62   actgagattgcccttctgt 80
            |||||||||||||||||||
Sbjct: 2415 actgagattgcccttctgt 2433

>dbj|AP003067.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-397P10, complete
             sequence
          Length = 190381

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    ctgagattgcccttctgtc 81
             |||||||||||||||||||
Sbjct: 83049 ctgagattgcccttctgtc 83031

>gb|AC171642.3| Rhesus Macaque  BAC CH250-405K12 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 138125

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     tgagattgcccttctgtct 82
              |||||||||||||||||||
Sbjct: 136212 tgagattgcccttctgtct 136230


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 680,281
Number of Sequences: 3902068
Number of extensions: 680281
Number of successful extensions: 42134
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42118
Number of HSP's gapped (non-prelim): 16
length of query: 131
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 110
effective length of database: 17,151,101,840
effective search space: 1886621202400
effective search space used: 1886621202400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)