>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
 Frame = +1

Query: 1   SPRQXFDLSGLFEERGE---QLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFEAT 171
           S  Q  +L  LFE + E   + RF S  P   II+K+EE A  + F  + K+ ++  E  
Sbjct: 325 SLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENL 384

Query: 172 RNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF 288
           + G KG L ++T++FQ+ P L +V++ K  GDT E+++F
Sbjct: 385 KAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKF 423

>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = +1

Query: 10  QXFDLSGLFEERGE----QLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFEATRN 177
           Q  +LS LF+ R +    Q RFVS    + II+ +E +A  + F + T++ +   E   +
Sbjct: 320 QGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSS 379

Query: 178 GHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF---CGSELKPGLRGLVDGLPEDG 348
              G LA+  +I+++ P L MV V K AG+T EY +F     S+L+  +    +G+P+  
Sbjct: 380 IKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWRATEGIPKSE 439

Query: 349 LPPTV 363
           +  T+
Sbjct: 440 ILRTI 444

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
 Frame = +1

Query: 16  FDLSGLFE--ERGEQLRFVSSAPVNTIISKLEEIAGQVSFTARTKD----CQVSFEATRN 177
           FDLSGLFE  E  E++RF S+   + I  KL EI   +    R K+     ++S EAT  
Sbjct: 316 FDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAEAT-- 373

Query: 178 GHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELKPGL 315
                  +  ++F++ P   MV + K  GDTAEY++     ++P L
Sbjct: 374 ------VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPAL 413

>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
 Frame = +1

Query: 19  DLSGLFEERG---EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFEATRNGHKG 189
           DLSG FE+      ++RF S++    ++ K+E    ++ F+ + K  ++  +      KG
Sbjct: 331 DLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHAKLRVKQEERNQKG 390

Query: 190 --ALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELK 306
              L+++ ++F++ P L +V++ K  GD+  YRQ     LK
Sbjct: 391 QVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERLLK 431

>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1272

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -2

Query: 279 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 124
           +FS  +  + +L+HD+  R L  +G   QR  VP+  R EA +   G  REA
Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643

>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1273

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -2

Query: 279 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 124
           +FS  +  + +L+HD+  R L  +G   QR  VP+  R EA +   G  REA
Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643

>DYIN_DROME (Q24246) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic|
           dynein intermediate chain) (Protein short wing)
          Length = 663

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 49  EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFEATRNGHKG 189
           E L  +  APV+ ++S L  +    S  + T+    S +AT NG  G
Sbjct: 56  EMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQSG 102

>P5CS_VIGAC (P32296) Delta 1-pyrroline-5-carboxylate synthetase (P5CS)|
           [Includes: Glutamate 5-kinase (EC 2.7.2.11)
           (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate
           reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde
           dehydrogenase) (Glutamyl-gamm
          Length = 671

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = -2

Query: 213 YLGGYGQRSLVPISCRLEAHLAILGARREANLPRDLLQLGDDGVHRRAGHETQLLAALLK 34
           YL   G + L+ I+  LEA+  I+    EA++             + AG+E  L+A L  
Sbjct: 313 YLQRKGNKILLKIADALEANEKIIRIENEADVT----------AAQEAGYEKSLVARLAL 362

Query: 33  QPGQIEXLA 7
           +PG+I  LA
Sbjct: 363 KPGKIASLA 371

>GLNA_GIBFU (Q9C2U9) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 353

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 315 SRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 413
           +R  GWPA G+P+P GE        YCGV + +
Sbjct: 141 NRPYGWPAGGFPAPQGE-------YYCGVGTGK 166

>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)|
          Length = 1401

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -2

Query: 351  KAILRQAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDELRRELEYLGGYGQRSLV 181
            K +++  I  T +   + TA ++ + +  S  + YL     +   EY   YG+RSL+
Sbjct: 1155 KLLIKYGIDVTIRNAYDKTALDIAIDAKFSNIVEYLKTKSGKFRREYKSSYGERSLL 1211

>GLNA_COLGL (Q12613) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 360

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 312 SSRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 413
           S+R  GWPA G+P+P G         YCGV + +
Sbjct: 142 SNRPFGWPANGFPAPQGP-------YYCGVGTGK 168

>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
 Frame = -2

Query: 336  QAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDE---LRRELEY 211
            ++IHE  K R +L A +L + S++    A L+H+E   LR +LE+
Sbjct: 1521 KSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEF 1565

>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = -2

Query: 336  QAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDE---LRRELEY 211
            + IHE  K R +L A +L + S++    A L+H+E   LR +LE+
Sbjct: 1521 KTIHELEKVRKQLEAEKLELQSALEESEASLEHEEGKILRAQLEF 1565

>CYSK2_BRAJU (O23735) Cysteine synthase (EC 2.5.1.47) (O-acetylserine|
           sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase)
           (OAS-TL) (OAS-TL6)
          Length = 324

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 178 GHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELKPGLRGLVDG 333
           G KGA+A + +I   TP   M+Q  +   +   + +  G E+  G  G +DG
Sbjct: 126 GMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDG 177

>REX_THEAQ (Q9X2V5) Redox-sensing transcriptional repressor rex|
          Length = 211

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -2

Query: 336 QAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDELRRELEYLGGYGQRSL---VPISCR 166
           Q +H TS  +L              G LA +   ++R++L Y G YG R +   VP+  R
Sbjct: 24  QGVHRTSSEQL--------------GELAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKR 69

Query: 165 LEAHLAILGARREANL 118
              H  ILG  R+  L
Sbjct: 70  ELRH--ILGLNRKWGL 83

>MOEA_SALTY (Q56066) Molybdopterin biosynthesis protein moeA|
          Length = 413

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -2

Query: 381 KISSNIHRRGKAILRQAIHETSKTRLELTAAELPVFSSV 265
           +   NI RRG+ I + A+   + TR  LT AELPV +S+
Sbjct: 133 RCGQNIRRRGEDIRQDAVVFPAGTR--LTTAELPVLASL 169

>GLNA_FUSSH (Q9UUN6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 356

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 315 SRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 413
           +R  GWP  G+P+P GE        YCGV + +
Sbjct: 143 NRPYGWPTGGFPAPQGE-------YYCGVGTGK 168

>RPOB_CARHZ (Q3A9Q7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1132

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 30/93 (32%), Positives = 41/93 (44%)
 Frame = -2

Query: 402 SPHNKFSKISSNIHRRGKAILRQAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDELRR 223
           SP  KF     N  R G  IL     E SK    +  +   VFS  +  + +L+HD+  R
Sbjct: 517 SPEGKFLDEMVNA-RHGSEILHV---EPSKVDF-VDVSPKQVFSVATSLIPFLEHDDANR 571

Query: 222 ELEYLGGYGQRSLVPISCRLEAHLAILGARREA 124
            L  +G   QR  VP+  R EA +   G   +A
Sbjct: 572 AL--MGANMQRQAVPL-IRTEAPVVGTGIEYKA 601


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,008,740
Number of Sequences: 219361
Number of extensions: 1361239
Number of successful extensions: 4102
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4100
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)