Clone Name | basdj09 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104875.1| Zea mays PCO067032 mRNA sequence Length = 1619 Score = 309 bits (156), Expect = 3e-81 Identities = 284/324 (87%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 1 tcatgtatggtaccagtatcatctgtgtttatcaaaatgaaaaagcccgctgctgccatc 60 ||||||||||||| || | ||||||||||||| |||||||| || || ||||||||||| Sbjct: 582 tcatgtatggtactag-agcatctgtgtttataaaaatgaagaaaccagctgctgccatt 640 Query: 61 cgtgatgcgaatgctgctctagagatcaacccaggactctgcaaagggctacaagacccg 120 |||||||| ||||||||||||||||||||||||| |||||||||| ||||| || || || Sbjct: 641 cgtgatgccaatgctgctctagagatcaacccag-actctgcaaaaggctataaaactcg 699 Query: 121 tggaatggctaatgccatgcttggcaagtgggaggaagctgctcgtgatctgcatgccgc 180 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||| | || Sbjct: 700 tggaatggcatatgccatgcttggcaaatgggaggaagctgctcatgatctgcacacagc 759 Query: 181 gtcaaacattgactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgc 240 || ||||| || || || || |||||||||||||| ||||||||||||||||||||||| Sbjct: 760 atctaacatggattacgacgaggagatcaatgctgtgctcaagaaggtggagcctaatgc 819 Query: 241 acacaagatagtggagcatcgcaggaagtatgataggctgaggaaagagagggaggagaa 300 |||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||| || Sbjct: 820 tcacaagatagtggaacatcgcaggaagtatgagaggttgagaaaagagagggaggaaaa 879 Query: 301 gaaagctgagcgtgacaggcttcg 324 || ||| ||||||| ||||||| Sbjct: 880 gagagcgcagcgtgatcggcttcg 903
>ref|XM_463768.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1535 Score = 301 bits (152), Expect = 7e-79 Identities = 277/316 (87%), Gaps = 2/316 (0%) Strand = Plus / Plus Query: 1 tcatgtatggtaccagtatcatctgtgtttatcaaaatgaaaaagcccgctgctgccatc 60 ||||||||||||| || | | |||||||||||||||||||| || || | |||||||||| Sbjct: 543 tcatgtatggtactag-agcttctgtgtttatcaaaatgaagaaacctgttgctgccatc 601 Query: 61 cgtgatgcgaatgctgctctagagatcaacccaggactctgcaaagggctacaagacccg 120 |||||||| ||||||||||||||||| ||||||| |||||||||| |||||||| || || Sbjct: 602 cgtgatgcaaatgctgctctagagattaacccag-actctgcaaaaggctacaaaactcg 660 Query: 121 tggaatggctaatgccatgcttggcaagtgggaggaagctgctcgtgatctgcatgccgc 180 |||||||||| |||| |||||||| || |||||||||||||| | |||||| || | || Sbjct: 661 tggaatggcttatgctatgcttggaaaatgggaggaagctgcccatgatcttcacacagc 720 Query: 181 gtcaaacattgactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgc 240 || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 721 atcgaacatggattatgatgatgagatcaatgctgtgctcaagaaggtggagcctaatgc 780 Query: 241 acacaagatagtggagcatcgcaggaagtatgataggctgaggaaagagagggaggagaa 300 |||||||||| |||| ||||||||||| ||||| ||||| | ||||||||||| || || Sbjct: 781 acacaagataatggaacatcgcaggaaatatgaacggctgcgaaaagagagggaagaaaa 840 Query: 301 gaaagctgagcgtgac 316 || ||||||||||||| Sbjct: 841 gagagctgagcgtgac 856
>dbj|AK102264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088M02, full insert sequence Length = 1534 Score = 301 bits (152), Expect = 7e-79 Identities = 277/316 (87%), Gaps = 2/316 (0%) Strand = Plus / Plus Query: 1 tcatgtatggtaccagtatcatctgtgtttatcaaaatgaaaaagcccgctgctgccatc 60 ||||||||||||| || | | |||||||||||||||||||| || || | |||||||||| Sbjct: 542 tcatgtatggtactag-agcttctgtgtttatcaaaatgaagaaacctgttgctgccatc 600 Query: 61 cgtgatgcgaatgctgctctagagatcaacccaggactctgcaaagggctacaagacccg 120 |||||||| ||||||||||||||||| ||||||| |||||||||| |||||||| || || Sbjct: 601 cgtgatgcaaatgctgctctagagattaacccag-actctgcaaaaggctacaaaactcg 659 Query: 121 tggaatggctaatgccatgcttggcaagtgggaggaagctgctcgtgatctgcatgccgc 180 |||||||||| |||| |||||||| || |||||||||||||| | |||||| || | || Sbjct: 660 tggaatggcttatgctatgcttggaaaatgggaggaagctgcccatgatcttcacacagc 719 Query: 181 gtcaaacattgactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgc 240 || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 720 atcgaacatggattatgatgatgagatcaatgctgtgctcaagaaggtggagcctaatgc 779 Query: 241 acacaagatagtggagcatcgcaggaagtatgataggctgaggaaagagagggaggagaa 300 |||||||||| |||| ||||||||||| ||||| ||||| | ||||||||||| || || Sbjct: 780 acacaagataatggaacatcgcaggaaatatgaacggctgcgaaaagagagggaagaaaa 839 Query: 301 gaaagctgagcgtgac 316 || ||||||||||||| Sbjct: 840 gagagctgagcgtgac 855
>gb|BT018368.1| Zea mays clone EL01N0302C07.d mRNA sequence Length = 1451 Score = 280 bits (141), Expect = 3e-72 Identities = 282/325 (86%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 1 tcatgtatggtaccagtatcatctgtgtttatcaaaatgaaaaagcccgctgctgccatc 60 ||||||||||||| || | ||||||||||||| |||||||| || || ||||||||||| Sbjct: 971 tcatgtatggtactag-agcatctgtgtttataaaaatgaagaaaccagctgctgccatt 913 Query: 61 cgtgatgcgaatgctgctctagagatcaacccaggactctgcaaa-gggctacaagaccc 119 |||||||| ||||||||||||||||||||||||| |||||||||| |||||| || || | Sbjct: 912 cgtgatgccaatgctgctctagagatcaacccag-actctgcaaaagggctataaaactc 854 Query: 120 gtggaatggctaatgccatgcttggcaagtgggaggaagctgctcgtgatctgcatgccg 179 |||||||||| |||||||||||||||| |||||||||||||||| |||| ||| | | Sbjct: 853 gtggaatggcatatgccatgcttggcaaatgggaggaagctgctcatgataggcacacag 794 Query: 180 cgtcaaacattgactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatg 239 | || ||||| || || || || |||||||| ||||| |||||||||||||||||||||| Sbjct: 793 catctaacatggattacgacgaggagatcaaggctgtgctcaagaaggtggagcctaatg 734 Query: 240 cacacaagatagtggagcatcgcaggaagtatgataggctgaggaaagagagggaggaga 299 | |||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||| | Sbjct: 733 ctcacaagatagtggaacatcgcaggaagtatgagaggttgagaaaagagagggaggaaa 674 Query: 300 agaaagctgagcgtgacaggcttcg 324 ||| ||| ||||||| ||||||| Sbjct: 673 agagagcgcagcgtgatcggcttcg 649
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 4e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 95 gactctgcaaagggctacaagacccgtggaatggctaatgccatgcttggcaagtgggag 154 ||||||||||| |||||||| || |||||||||||| |||| |||||||| || |||||| Sbjct: 15366 gactctgcaaaaggctacaaaactcgtggaatggcttatgctatgcttggaaaatgggag 15425 Query: 155 gaagctgctcgtgatctgcatgccgcgtcaaacattgactatgatgatgagatcaatgct 214 |||||||| | |||||| || | || || ||||| || ||||||||||||||||||||| Sbjct: 15426 gaagctgcccatgatcttcacacagcatcgaacatggattatgatgatgagatcaatgct 15485 Query: 215 gtcctcaagaaggt 228 || ||||||||||| Sbjct: 15486 gtgctcaagaaggt 15499 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 225 aggtggagcctaatgcacacaagatagtggagcatcgcaggaagtatgataggctgagga 284 |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||| | | Sbjct: 15576 aggtggagcctaatgcacacaagataatggaacatcgcaggaaatatgaacggctgcgaa 15635 Query: 285 aagagagggaggagaagaaagctgagcgtgac 316 |||||||||| || |||| ||||||||||||| Sbjct: 15636 aagagagggaagaaaagagagctgagcgtgac 15667 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaaaaagcccgctgctgccatccgtgatgcgaatgctgctcta 81 |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 14982 tctgtgtttatcaaaatgaagaaacctgttgctgccatccgtgatgcaaatgctgctcta 15041 Query: 82 gag 84 ||| Sbjct: 15042 gag 15044 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tggaatggctaatgccatgc 140 |||||||||||||||||||| Sbjct: 23031342 tggaatggctaatgccatgc 23031323
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 123 bits (62), Expect = 4e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 95 gactctgcaaagggctacaagacccgtggaatggctaatgccatgcttggcaagtgggag 154 ||||||||||| |||||||| || |||||||||||| |||| |||||||| || |||||| Sbjct: 9975 gactctgcaaaaggctacaaaactcgtggaatggcttatgctatgcttggaaaatgggag 10034 Query: 155 gaagctgctcgtgatctgcatgccgcgtcaaacattgactatgatgatgagatcaatgct 214 |||||||| | |||||| || | || || ||||| || ||||||||||||||||||||| Sbjct: 10035 gaagctgcccatgatcttcacacagcatcgaacatggattatgatgatgagatcaatgct 10094 Query: 215 gtcctcaagaaggt 228 || ||||||||||| Sbjct: 10095 gtgctcaagaaggt 10108 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 225 aggtggagcctaatgcacacaagatagtggagcatcgcaggaagtatgataggctgagga 284 |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||| | | Sbjct: 10185 aggtggagcctaatgcacacaagataatggaacatcgcaggaaatatgaacggctgcgaa 10244 Query: 285 aagagagggaggagaagaaagctgagcgtgac 316 |||||||||| || |||| ||||||||||||| Sbjct: 10245 aagagagggaagaaaagagagctgagcgtgac 10276 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaaaaagcccgctgctgccatccgtgatgcgaatgctgctcta 81 |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 9591 tctgtgtttatcaaaatgaagaaacctgttgctgccatccgtgatgcaaatgctgctcta 9650 Query: 82 gag 84 ||| Sbjct: 9651 gag 9653
>dbj|AP006851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa183H18 Length = 38313 Score = 123 bits (62), Expect = 4e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 95 gactctgcaaagggctacaagacccgtggaatggctaatgccatgcttggcaagtgggag 154 ||||||||||| |||||||| || |||||||||||| |||| |||||||| || |||||| Sbjct: 15366 gactctgcaaaaggctacaaaactcgtggaatggcttatgctatgcttggaaaatgggag 15425 Query: 155 gaagctgctcgtgatctgcatgccgcgtcaaacattgactatgatgatgagatcaatgct 214 |||||||| | |||||| || | || || ||||| || ||||||||||||||||||||| Sbjct: 15426 gaagctgcccatgatcttcacacagcatcgaacatggattatgatgatgagatcaatgct 15485 Query: 215 gtcctcaagaaggt 228 || ||||||||||| Sbjct: 15486 gtgctcaagaaggt 15499 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 225 aggtggagcctaatgcacacaagatagtggagcatcgcaggaagtatgataggctgagga 284 |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||| | | Sbjct: 15576 aggtggagcctaatgcacacaagataatggaacatcgcaggaaatatgaacggctgcgaa 15635 Query: 285 aagagagggaggagaagaaagctgagcgtgac 316 |||||||||| || |||| ||||||||||||| Sbjct: 15636 aagagagggaagaaaagagagctgagcgtgac 15667 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaaaaagcccgctgctgccatccgtgatgcgaatgctgctcta 81 |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 14982 tctgtgtttatcaaaatgaagaaacctgttgctgccatccgtgatgcaaatgctgctcta 15041 Query: 82 gag 84 ||| Sbjct: 15042 gag 15044
>ref|NM_118393.2| Arabidopsis thaliana unknown protein AT4G22670 mRNA, complete cds Length = 1721 Score = 46.1 bits (23), Expect = 0.070 Identities = 68/83 (81%) Strand = Plus / Plus Query: 191 gactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgcacacaagata 250 ||||||||||| || || | |||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 817 gactatgatgaggaaattagtgctgttctcaaaaaggttgaacctaatgcacataagctt 876 Query: 251 gtggagcatcgcaggaagtatga 273 | |||||| || || |||||||| Sbjct: 877 gaggagcaccgtagaaagtatga 899
>gb|AY059803.1| Arabidopsis thaliana HSP associated protein like (At4g22670; T12H17.60) mRNA, complete cds Length = 1646 Score = 46.1 bits (23), Expect = 0.070 Identities = 68/83 (81%) Strand = Plus / Plus Query: 191 gactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgcacacaagata 250 ||||||||||| || || | |||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 817 gactatgatgaggaaattagtgctgttctcaaaaaggttgaacctaatgcacataagctt 876 Query: 251 gtggagcatcgcaggaagtatga 273 | |||||| || || |||||||| Sbjct: 877 gaggagcaccgtagaaagtatga 899
>gb|BT003349.1| Arabidopsis thaliana HSP associated protein like (At4g22670) mRNA, complete cds Length = 1359 Score = 46.1 bits (23), Expect = 0.070 Identities = 68/83 (81%) Strand = Plus / Plus Query: 191 gactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgcacacaagata 250 ||||||||||| || || | |||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 661 gactatgatgaggaaattagtgctgttctcaaaaaggttgaacctaatgcacataagctt 720 Query: 251 gtggagcatcgcaggaagtatga 273 | |||||| || || |||||||| Sbjct: 721 gaggagcaccgtagaaagtatga 743
>gb|AY087472.1| Arabidopsis thaliana clone 35786 mRNA, complete sequence Length = 1636 Score = 46.1 bits (23), Expect = 0.070 Identities = 68/83 (81%) Strand = Plus / Plus Query: 191 gactatgatgatgagatcaatgctgtcctcaagaaggtggagcctaatgcacacaagata 250 ||||||||||| || || | |||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 804 gactatgatgaggaaattagtgctgttctcaaaaaggttgaacctaatgcacataagctt 863 Query: 251 gtggagcatcgcaggaagtatga 273 | |||||| || || |||||||| Sbjct: 864 gaggagcaccgtagaaagtatga 886
>emb|CR731575.2|CNS0GRFG Tetraodon nigroviridis full-length cDNA Length = 1458 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 277 gctgaggaaagagagggaggagaaga 302 ||||||| |||||||||||||||||| Sbjct: 32 gctgagggaagagagggaggagaaga 7
>emb|AJ705026.1| Botryotinia narcissicola partial g3pdh gene for glyceraldehyde 3-phosphate dehydrogenase, exons 2-3, strain MUCL2120 Length = 886 Score = 44.1 bits (22), Expect = 0.27 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 atgatgagatcaatgctgtcctcaagaagg 227 ||||||||||||| |||||| ||||||||| Sbjct: 699 atgatgagatcaaggctgtcatcaagaagg 728
>emb|AJ705025.1| Botryotinia narcissicola partial g3pdh gene for glyceraldehyde 3-phosphate dehydrogenase, exons 2-3, strain MUCL18857 Length = 886 Score = 44.1 bits (22), Expect = 0.27 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 atgatgagatcaatgctgtcctcaagaagg 227 ||||||||||||| |||||| ||||||||| Sbjct: 699 atgatgagatcaaggctgtcatcaagaagg 728
>emb|CR858659.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1333 (from clone DKFZp459J1333) Length = 2770 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 aaagagagggaggagaagaaag 305 |||||||||||||||||||||| Sbjct: 920 aaagagagggaggagaagaaag 899
>emb|CR861165.1| Pongo pygmaeus mRNA; cDNA DKFZp459P0616 (from clone DKFZp459P0616) Length = 2517 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 aaagagagggaggagaagaaag 305 |||||||||||||||||||||| Sbjct: 741 aaagagagggaggagaagaaag 720
>gb|BC035610.1| Homo sapiens, Similar to glutamate receptor, ionotrophic, AMPA 4, clone IMAGE:5199898, mRNA Length = 2570 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 aaagagagggaggagaagaaag 305 |||||||||||||||||||||| Sbjct: 741 aaagagagggaggagaagaaag 720
>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete sequences Length = 195800 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 aaagagagggaggagaagaaag 305 |||||||||||||||||||||| Sbjct: 83025 aaagagagggaggagaagaaag 83004
>emb|AL670292.9| Mouse DNA sequence from clone RP23-231H22 on chromosome X, complete sequence Length = 217063 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaagaaag 305 |||||||||||||||||| ||||||| Sbjct: 73948 gaggaaagagagggaggaaaagaaag 73923
>emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on chromosome 3, complete sequence Length = 207366 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaagaaag 305 ||||||||||||| |||||||||||| Sbjct: 42732 gaggaaagagaggaaggagaagaaag 42707
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cccaggactctgcaaagggct 110 ||||||||||||||||||||| Sbjct: 102398 cccaggactctgcaaagggct 102418
>gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, complete sequence Length = 227679 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gagggaggagaagaaagctga 309 ||||||||||||||||||||| Sbjct: 112752 gagggaggagaagaaagctga 112772
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaagaaa 304 ||||||||||||||||| ||||||| Sbjct: 9235 gaggaaagagagggaggggaagaaa 9259
>gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, complete sequence Length = 268826 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gagggaggagaagaaagctga 309 ||||||||||||||||||||| Sbjct: 194203 gagggaggagaagaaagctga 194223
>gb|AC142110.4| Mus musculus BAC clone RP24-104I11 from chromosome 7, complete sequence Length = 177085 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaa 300 ||||||||||||||||||||| Sbjct: 108619 gaggaaagagagggaggagaa 108599 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaa 300 ||||||||||||||||||||| Sbjct: 70443 gaggaaagagagggaggagaa 70423
>gb|AC124196.4| Mus musculus BAC clone RP23-296L12 from chromosome 13, complete sequence Length = 193553 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gaaagagagggaggagaagaa 303 ||||||||||||||||||||| Sbjct: 157015 gaaagagagggaggagaagaa 156995
>gb|AC145209.2| Homo sapiens chromosome 17, clone XXfos-85688H6, complete sequence Length = 41001 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agagggaggagaagaaagctg 308 ||||||||||||||||||||| Sbjct: 16984 agagggaggagaagaaagctg 16964
>gb|AC117254.3| Mus musculus BAC clone RP24-418D1 from 6, complete sequence Length = 172656 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaa 300 ||||||||||||||||||||| Sbjct: 89168 gaggaaagagagggaggagaa 89148
>emb|AL359373.21| Human DNA sequence from clone RP11-5L19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ31862, FLJ22091, FLJ10597) and two CpG islands, complete sequence Length = 117638 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 ggctgaggaaagagagggaggagaa 300 ||||||||| ||||||||||||||| Sbjct: 53533 ggctgaggacagagagggaggagaa 53509
>emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chromosome 13 Contains a novel FLJ31073 containing gene, six novel genes and a CpG island, complete sequence Length = 176930 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaa 300 ||||||||||||||||||||| Sbjct: 175089 gaggaaagagagggaggagaa 175109
>gb|AC164610.3| Mus musculus BAC clone RP23-422D16 from chromosome 6, complete sequence Length = 200529 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaa 300 ||||||||||||||||||||| Sbjct: 31137 gaggaaagagagggaggagaa 31117
>ref|XM_784181.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein KIAA0256 (LOC584318), mRNA Length = 2610 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gaaagagagggaggagaagaa 303 ||||||||||||||||||||| Sbjct: 2547 gaaagagagggaggagaagaa 2567
>ref|XM_782754.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein KIAA0256 (LOC582816), partial mRNA Length = 2778 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gaaagagagggaggagaagaa 303 ||||||||||||||||||||| Sbjct: 2343 gaaagagagggaggagaagaa 2363
>gb|AY036906.1| Vitis labrusca Hsp70 interacting protein/thioredoxin chimera mRNA, complete cds Length = 1405 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 224 aaggtggagcctaatgcacacaagatagtggagcatcgcag 264 ||||| || |||||||||| |||||| | |||||||||||| Sbjct: 706 aaggttgaacctaatgcacgcaagattgaggagcatcgcag 746
>gb|AC105415.2| Homo sapiens BAC clone RP11-265O12 from 4, complete sequence Length = 185848 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 tttatcaaaatgaaaaagcccgctg 52 ||||||||||||| ||||||||||| Sbjct: 89114 tttatcaaaatgataaagcccgctg 89090
>gb|AC011744.8| Homo sapiens BAC clone RP11-324I10 from 4, complete sequence Length = 191596 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 tttatcaaaatgaaaaagcccgctg 52 ||||||||||||| ||||||||||| Sbjct: 130221 tttatcaaaatgataaagcccgctg 130197
>dbj|AK162946.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330069J16 product:Weakly similar to TRIPARTITE motif protein TRIM12, full insert sequence Length = 4290 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaa 300 ||||||||||||||||||||| Sbjct: 990 gaggaaagagagggaggagaa 1010
>dbj|AK040923.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530045M22 product:solute carrier family 27 (fatty acid transporter), member 1, full insert sequence Length = 2730 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cccaggactctgcaaagggct 110 ||||||||||||||||||||| Sbjct: 25 cccaggactctgcaaagggct 45
>emb|CT030655.7| Mouse DNA sequence from clone RP23-259C9 on chromosome 13, complete sequence Length = 120944 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agagggaggagaagaaagctg 308 ||||||||||||||||||||| Sbjct: 35357 agagggaggagaagaaagctg 35337
>gb|AF023256.1|MMFATP1 Mus musculus fatty acid transport protein (FATP) gene, exons 1-3 Length = 2403 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cccaggactctgcaaagggct 110 ||||||||||||||||||||| Sbjct: 297 cccaggactctgcaaagggct 317
>gb|AC139099.2| Homo sapiens chromosome 17, clone G549, complete sequence Length = 125104 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agagggaggagaagaaagctg 308 ||||||||||||||||||||| Sbjct: 68097 agagggaggagaagaaagctg 68117
>gb|AC139848.4| Mus musculus BAC clone RP23-358O17 from 8, complete sequence Length = 241809 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaagaaa 304 ||||||||||||||||| ||||||| Sbjct: 70959 gaggaaagagagggaggggaagaaa 70935
>gb|AC162033.11| Mus musculus chromosome 8, clone RP23-162M13, complete sequence Length = 217343 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cccaggactctgcaaagggct 110 ||||||||||||||||||||| Sbjct: 24508 cccaggactctgcaaagggct 24528
>emb|AL645666.10| Mouse DNA sequence from clone RP23-356E21 on chromosome 4, complete sequence Length = 155103 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 aagagagggaggagaagaaag 305 ||||||||||||||||||||| Sbjct: 129894 aagagagggaggagaagaaag 129874
>ref|NM_124237.1| Arabidopsis thaliana unknown protein AT5G48610 mRNA, complete cds Length = 1413 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ggaggagaagaaagctgagc 311 |||||||||||||||||||| Sbjct: 204 ggaggagaagaaagctgagc 223
>gb|AC160761.6| Mus musculus BAC clone RP24-163J22 from chromosome 7, complete sequence Length = 199480 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 84107 gaggaaagagagggaggaga 84126
>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence Length = 249571 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 87590 gaggaaagagagggaggaga 87571
>gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced KIT protein (KIT) gene, complete cds Length = 89603 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaagaa 303 |||||||||||| ||||||||||| Sbjct: 63786 gaggaaagagagagaggagaagaa 63809
>gb|AY372431.1| Oncorhynchus mykiss CC chemokine CK-2.1 (CK-2.1) mRNA, complete cds Length = 1163 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 653 gaggaaagagagggaggaga 634
>gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosome 16, complete sequence Length = 130390 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 aggaaagagagggaggagaa 300 |||||||||||||||||||| Sbjct: 79695 aggaaagagagggaggagaa 79676
>gb|AE006326.1| Lactococcus lactis subsp. lactis IL1403 section 88 of 218 of the complete genome Length = 13885 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tgtttatcaaaatgaaaaag 45 |||||||||||||||||||| Sbjct: 9094 tgtttatcaaaatgaaaaag 9113
>gb|BC052753.1| Danio rerio reticulon 1b, mRNA (cDNA clone IMAGE:5915483), containing frame-shift errors Length = 1761 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aaagagagggaggagaagaaagct 307 |||||||||||||||||| ||||| Sbjct: 1579 aaagagagggaggagaaggaagct 1602
>gb|AC158349.5| Mus musculus chromosome 8, clone RP24-229D22, complete sequence Length = 163656 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ggaaagagagggaggagaag 301 |||||||||||||||||||| Sbjct: 64127 ggaaagagagggaggagaag 64108
>gb|AC166368.3| Mus musculus BAC clone RP23-63I1 from chromosome 7, complete sequence Length = 242362 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 237790 gaggaaagagagggaggaga 237771
>gb|AC151974.3| Mus musculus BAC clone RP24-370L8 from chromosome 7, complete sequence Length = 199179 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 123670 gaggaaagagagggaggaga 123651
>gb|AC134548.5| Mus musculus BAC clone RP24-258K6 from chromosome 15, complete sequence Length = 177331 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gagatcaatgctgtcctcaa 222 |||||||||||||||||||| Sbjct: 17548 gagatcaatgctgtcctcaa 17567
>ref|NM_001029948.1| Danio rerio reticulon 1b (rtn1b), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aaagagagggaggagaagaaagct 307 |||||||||||||||||| ||||| Sbjct: 1669 aaagagagggaggagaaggaagct 1692
>gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aggaaagagagggaggagaa 300 |||||||||||||||||||| Sbjct: 36298 aggaaagagagggaggagaa 36317
>gb|AC104296.4| Mus Musculus Strain 129S6/SvEvTac chromosome 2 BAC, RP22-161J17, complete sequence Length = 161984 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 73208 gaggaaagagagggaggaga 73227
>emb|AL031116.2|HS878O8 Human DNA sequence from clone RP5-878O8 on chromosome Xq21.1-21.33 Contains the CPXCR1 gene for CPX chromosome region, candidate 1, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gaaagagagggaggagaagaaagc 306 ||||||||||||||| |||||||| Sbjct: 23975 gaaagagagggaggaaaagaaagc 23998
>emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 on chromosome 22q11.22-12.1, complete sequence Length = 134205 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 78024 gaggaaagagagggaggaga 78043
>gb|AC129888.3| Atelerix albiventris clone LB4-495B20, complete sequence Length = 149724 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gaaagagagggaggagaagaaagc 306 |||||||||||||||| ||||||| Sbjct: 86117 gaaagagagggaggaggagaaagc 86094
>gb|AC109142.7| Mus musculus chromosome 8, clone RP23-168D5, complete sequence Length = 207544 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 ctgaggaaagagagggaggagaag 301 ||||||| |||||||||||||||| Sbjct: 81436 ctgaggagagagagggaggagaag 81459
>emb|AL663055.13| Mouse DNA sequence from clone RP23-102H8 on chromosome 11 Contains the 5' end of the Gria1 gene for glutamate receptor, ionotropic, AMPA1 (alpha 1), complete sequence Length = 202981 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 142649 gaggaaagagagggaggaga 142668
>gb|AC010857.8| Homo sapiens chromosome 8, clone RP11-301G7, complete sequence Length = 155064 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 atgctgtcctcaagaaggtg 229 |||||||||||||||||||| Sbjct: 31259 atgctgtcctcaagaaggtg 31240
>gb|AY555036.1| Danio rerio reticulon 1-c (rtn1) mRNA, complete cds, alternatively spliced Length = 1832 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aaagagagggaggagaagaaagct 307 |||||||||||||||||| ||||| Sbjct: 1666 aaagagagggaggagaaggaagct 1689
>gb|AY555034.1| Danio rerio reticulon 1-a1 (rtn1) mRNA, complete cds, alternatively spliced Length = 3527 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aaagagagggaggagaagaaagct 307 |||||||||||||||||| ||||| Sbjct: 3361 aaagagagggaggagaaggaagct 3384
>emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in linkage group 20, complete sequence Length = 177570 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aaagagagggaggagaagaaagct 307 |||||||||||||||||| ||||| Sbjct: 113685 aaagagagggaggagaaggaagct 113708
>gb|AF165142.2| Homo sapiens chromosome 8 clone CTA-392C11 map cen, complete sequence Length = 105496 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 atgctgtcctcaagaaggtg 229 |||||||||||||||||||| Sbjct: 103269 atgctgtcctcaagaaggtg 103250
>gb|AC092500.2| Homo sapiens chromosome 3 clone RP11-111P21, complete sequence Length = 182569 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaagaa 303 |||||||||||||||| ||||||| Sbjct: 117612 gaggaaagagagggagaagaagaa 117635
>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 223542 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaagaa 303 |||||||||||||||| ||||||| Sbjct: 165679 gaggaaagagagggagaagaagaa 165656
>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gaaagagagggaggagaagaaagc 306 |||||||||||||| ||||||||| Sbjct: 131348 gaaagagagggaggggaagaaagc 131325
>gb|AC105999.4| Homo sapiens chromosome 8, clone CTA-392C11, complete sequence Length = 105495 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atgctgtcctcaagaaggtg 229 |||||||||||||||||||| Sbjct: 2229 atgctgtcctcaagaaggtg 2248
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tttatcaaaatgaaaaagcc 47 |||||||||||||||||||| Sbjct: 2248842 tttatcaaaatgaaaaagcc 2248861
>gb|AF418561.1| Oncorhynchus mykiss CC chemokine with stalk CK2 mRNA, complete cds Length = 981 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 494 gaggaaagagagggaggaga 475
>dbj|AK132104.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110021G05 product:unclassifiable, full insert sequence Length = 1072 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aggaaagagagggaggagaa 300 |||||||||||||||||||| Sbjct: 558 aggaaagagagggaggagaa 577
>gb|AC092545.3| Homo sapiens BAC clone RP11-586A2 from 4, complete sequence Length = 96638 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaagaa 303 |||||||||||| ||||||||||| Sbjct: 17840 gaggaaagagagagaggagaagaa 17863
>gb|AC156984.9| Mus musculus chromosome 5, clone RP23-418H8, complete sequence Length = 171080 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaagaa 303 ||||||||||||||||||| |||| Sbjct: 21647 gaggaaagagagggaggaggagaa 21624
>ref|XM_693851.1| PREDICTED: Danio rerio similar to fibrillin 1 (LOC570376), mRNA Length = 4056 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ggaaagagagggaggagaag 301 |||||||||||||||||||| Sbjct: 27 ggaaagagagggaggagaag 46
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gaaagagagggaggagaagaaagc 306 |||||||||||||||| ||||||| Sbjct: 1657317 gaaagagagggaggaggagaaagc 1657294 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gaaagagagggaggagaagaaagc 306 |||||||||||||| ||||||||| Sbjct: 152031 gaaagagagggaggggaagaaagc 152054
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gagaagaaagctgagcgtga 315 |||||||||||||||||||| Sbjct: 1542665 gagaagaaagctgagcgtga 1542646
>gb|AC127466.3| Atelerix albiventris clone LB4-197A24, complete sequence Length = 163018 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gaaagagagggaggagaagaaagc 306 |||||||||||||| ||||||||| Sbjct: 86925 gaaagagagggaggggaagaaagc 86948
>gb|AC149218.7| Mus musculus BAC clone RP24-96C7 from chromosome 7, complete sequence Length = 154419 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 105257 gaggaaagagagggaggaga 105276
>dbj|AK089798.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830022O08 product:hypothetical Glutamic acid-rich region containing protein, full insert sequence Length = 1563 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggagaagaa 303 ||||||||||||||||||| |||| Sbjct: 645 gaggaaagagagggaggaggagaa 668
>gb|AF195272.1|AF195272 Mus musculus serine/threonine kinase AIE1 gene, complete cds Length = 14045 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 3226 gaggaaagagagggaggaga 3207
>gb|AC105430.2| Homo sapiens chromosome 16 clone RP11-2C15, complete sequence Length = 105731 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 ctgtcctcaagaaggtggagccta 236 ||||||||||| |||||||||||| Sbjct: 35348 ctgtcctcaaggaggtggagccta 35371
>gb|AC068987.38| Homo sapiens 12 BAC RP11-923I11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 75663 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagagggaggagaagaaag 305 |||||||||||||||||||| Sbjct: 44049 agagagggaggagaagaaag 44030
>gb|AC068120.6| Homo sapiens BAC clone RP11-12E9 from 2, complete sequence Length = 104268 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 aggaaagagagggaggagaagaaa 304 |||||||||||||||| ||||||| Sbjct: 92497 aggaaagagagggaggtgaagaaa 92520
>gb|AC026205.6|AC026205 Homo sapiens chromosome 3 clone RP11-61I9 map 3p, complete sequence Length = 176669 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tctgtgtttatcaaaatgaa 41 |||||||||||||||||||| Sbjct: 139056 tctgtgtttatcaaaatgaa 139037
>gb|AC024159.4|AC024159 Homo sapiens chromosome 3 clone RP11-255K15 map 3p, complete sequence Length = 195544 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaa 41 |||||||||||||||||||| Sbjct: 78920 tctgtgtttatcaaaatgaa 78939
>gb|AC026197.3|AC026197 Homo sapiens chromosome 3 clone RP11-483G20 map 3p, complete sequence Length = 202083 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaa 41 |||||||||||||||||||| Sbjct: 147858 tctgtgtttatcaaaatgaa 147877
>gb|AC020755.3|AC020755 Homo sapiens chromosome 3 clone RP11-3D22 map 3p, complete sequence Length = 166076 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaa 41 |||||||||||||||||||| Sbjct: 112861 tctgtgtttatcaaaatgaa 112880
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tggaatggctaatgccatgc 140 |||||||||||||||||||| Sbjct: 55739 tggaatggctaatgccatgc 55720
>emb|BX649220.6| Chicken DNA sequence from clone WAG-14F8, complete sequence Length = 87646 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 aagagagggaggagaagaaa 304 |||||||||||||||||||| Sbjct: 59942 aagagagggaggagaagaaa 59923
>emb|AL833805.11| Mouse DNA sequence from clone RP23-158L19 on chromosome X, complete sequence Length = 118691 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 33437 gaggaaagagagggaggaga 33418
>dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15N18 Length = 66084 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ggaggagaagaaagctgagc 311 |||||||||||||||||||| Sbjct: 35163 ggaggagaagaaagctgagc 35182
>gb|AC149278.3| Mus musculus BAC clone RP24-101G17 from 7, complete sequence Length = 194766 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 163636 gaggaaagagagggaggaga 163617
>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20, complete sequence Length = 195359 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aaagagagggaggagaagaaagct 307 |||||||||||||||||| ||||| Sbjct: 130676 aaagagagggaggagaaggaagct 130699
>emb|BX323850.16| Zebrafish DNA sequence from clone DKEY-156A5 in linkage group 11, complete sequence Length = 156989 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgtttatcaaaatgaaaa 43 |||||||||||||||||||| Sbjct: 121575 tgtgtttatcaaaatgaaaa 121556
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 taccagtatcatctgtgttt 30 |||||||||||||||||||| Sbjct: 1074527 taccagtatcatctgtgttt 1074546
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gagatcaatgctgtcctcaa 222 |||||||||||||||||||| Sbjct: 16290 gagatcaatgctgtcctcaa 16271
>gb|AC079445.28| Mus musculus strain C57BL/6J chromosome 5 clone rp23-403l21, complete sequence Length = 189517 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggagaagaa 303 ||||||||||||||||||| |||| Sbjct: 101387 gaggaaagagagggaggaggagaa 101364
>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence Length = 217178 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 59429 gaggaaagagagggaggaga 59410
>gb|AC024162.5| Homo sapiens chromosome 3 clone RP11-320K1 map 3p, complete sequence Length = 173370 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaa 41 |||||||||||||||||||| Sbjct: 166511 tctgtgtttatcaaaatgaa 166530
>gb|AC026167.5| Homo sapiens chromosome 3 clone RP11-140B10 map 3p, complete sequence Length = 188867 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctgtgtttatcaaaatgaa 41 |||||||||||||||||||| Sbjct: 4640 tctgtgtttatcaaaatgaa 4659
>emb|AL844481.5| Mouse DNA sequence from clone RP23-44H23 on chromosome 2, complete sequence Length = 109532 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gaggaaagagagggaggaga 299 |||||||||||||||||||| Sbjct: 57007 gaggaaagagagggaggaga 57026 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,625,881 Number of Sequences: 3902068 Number of extensions: 3625881 Number of successful extensions: 115019 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114654 Number of HSP's gapped (non-prelim): 359 length of query: 325 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 303 effective length of database: 17,147,199,772 effective search space: 5195601530916 effective search space used: 5195601530916 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)