>BACH_HALHM (P33970) Halorhodopsin (HR) (Fragment)|
          Length = 206

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +3

Query: 69  GSAARRTISPREMLVPWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARTGSLKDLAAIL 245
           G AA  T S   +   W G+ C      LY+L     +DAEV  +     +LK L  +L
Sbjct: 118 GLAAALTTSSYLLRWVWYGISCAFFVVVLYILLAEWAKDAEVAGTADIFNTLKVLTVVL 176

>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
           (AtRSW1)
          Length = 1081

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 407 LNPGSSIIVLQEVLLCRFLDYHTSHTTLLAY 315
           L P   +I+L+ ++LC FL Y T+H    AY
Sbjct: 271 LTPYRVVIILRLIILCFFLQYRTTHPVKNAY 301

>NU4M_ASTPE (P11992) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 460

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 346 ITPLIPLCWHISGVSELTRPETATTSGRTLLAVSKIAAKSFRLPVL 209
           +TPL+ L W I+ V+ L  P T    G  L+ V+ I   +   P++
Sbjct: 354 VTPLLTLWWTITCVANLGLPPTPNLIGELLILVAIIDWNTLSAPII 399

>HEN1_HUMAN (Q02575) Helix-loop-helix protein 1 (HEN1) (Nescient helix loop|
           helix 1) (NSCL-1)
          Length = 133

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 128 DPAPRD-QHLARRNRPASSRSGARERTAGGIPARLELRIFNL 6
           +P  +D QHL+R  R    R+ A+ RTA     R+ +  FNL
Sbjct: 52  EPGRKDLQHLSREERRRRRRATAKYRTAHATRERIRVEAFNL 93

>AMPA_DESPS (Q6AJZ3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 502

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = +3

Query: 144 AAALYLLGRSSG-RDAEVLRSVAR-TGSLKDLAAILDTASKVLPLVVAVSGRVSSDT--P 311
           A  + LLG   G +D+++ R + R TG L    A    A++VL ++  ++GR S+DT  P
Sbjct: 72  AERILLLGLGKGDKDSDLQRDLLRQTGGLVAQKAAEIKATEVLVVIPTLAGRKSADTLEP 131

Query: 312 LICQQSGMRGVIVEETAEQHFLKHNDA 392
           L+       GV++ +     ++   DA
Sbjct: 132 LV------EGVLLGDYRFLKYMSKKDA 152

>TM16E_MOUSE (Q75UR0) Transmembrane protein 16E (Gnathodiaphyseal dysplasia 1|
           protein homolog)
          Length = 904

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -1

Query: 388 SLCFRKCCSAVSSTITPLIPLC----WH-ISGVSELTRPETATTSGRTLLAVSKIAAKSF 224
           ++C  K  + V+  + P +PLC    W+ +SG        T  T G  LL  S ++   +
Sbjct: 423 AMCKHKKMNPVTKEMEPHMPLCHRIPWYFVSG--------TTVTFGMALLLSSMVSILIY 474

Query: 223 RLPVLAT 203
           RL V AT
Sbjct: 475 RLSVFAT 481

>ADA22_XENLA (O42596) ADAM 22 precursor (A disintegrin and metalloproteinase|
            domain 22) (Metalloprotease-disintegrin MDC11b) (MDC11.2)
          Length = 935

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/87 (21%), Positives = 32/87 (36%)
 Frame = -1

Query: 379  FRKCCSAVSSTITPLIPLCWHISGVSELTRPETATTSGRTLLAVSKIAAKSFRLPVLATD 200
            F +  + +S + +  IP   H+S V E  RP + +  G    +  K+  K FR    +T+
Sbjct: 829  FCRRSNGLSHSWSERIPDTKHVSDVCENGRPRSNSWQGNVTSSRKKLRGKRFRPRSNSTE 888

Query: 199  XXXXXXXXXXXXXXXXXXXXRQHPTPP 119
                                  +P PP
Sbjct: 889  TLSPAKSPSSSTGSIASSRRYPYPMPP 915

>CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3.6.3.-)|
          Length = 1625

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = +3

Query: 93  SPREMLVPWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARTGSLKDLAAILDTASKVLPL 272
           +P  +LVP       L+AAA+ L+   +     V R  A   + + LAA+++   +++ L
Sbjct: 175 NPLAILVP-------LTAAAMDLVAMGATVTGWVARLPAAPQTTRALAALINHQPRMVSL 227

Query: 273 VVAVSGRVSSDTPLICQQSGMRGV 344
           + +  GRV +D  L    +   G+
Sbjct: 228 MESRLGRVGTDIALAATTAAANGL 251

>HEN1_MOUSE (Q02576) Helix-loop-helix protein 1 (HEN1) (Nescient helix loop|
           helix 1) (NSCL-1)
          Length = 133

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 110 QHLARRNRPASSRSGARERTAGGIPARLELRIFNL 6
           QHL+R  R    R+ A+ RTA     R+ +  FNL
Sbjct: 59  QHLSREERRRRRRATAKYRTAHATRERIRVEAFNL 93

>RUVA_STRAW (Q820F4) Holliday junction ATP-dependent DNA helicase ruvA (EC|
           3.6.1.-)
          Length = 203

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 90  ISPREMLVPWGGVGCCLSAAALYLLGRSSGRDAEVLRS-VARTGSLKDLAAILDTASKVL 266
           ++P   +V  GG+G  +      L G   GR+A++  S V R  SL     + D   +V 
Sbjct: 12  LAPDSAVVEVGGIGIAVQCTPNTLSGLRMGREAKLATSLVVREDSLTLYGFVDDDERQVF 71

Query: 267 PLVVAVSG 290
            L+   SG
Sbjct: 72  ELLQTASG 79

>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC|
           3.4.21.75) (Furin-1) (Kex2-like endoprotease 1)
           (dKLIP-1)
          Length = 1101

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 23  APASPESRPPSVPARRICCSPDDFSARDAGPVGRGRVLP 139
           +PA+P S P S P   +   P   SA    P G+  VLP
Sbjct: 155 SPAAPSSAPSSPPTVAVPPPPPPSSALKVDPNGQSPVLP 193

>FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 precursor (EC|
           3.4.21.75) (Furin-1) (Kex2-like endoprotease 1)
           (dKLIP-1)
          Length = 1269

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 23  APASPESRPPSVPARRICCSPDDFSARDAGPVGRGRVLP 139
           +PA+P S P S P   +   P   SA    P G+  VLP
Sbjct: 155 SPAAPSSAPSSPPTVAVPPPPPPSSALKVDPNGQSPVLP 193


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,504,511
Number of Sequences: 219361
Number of extensions: 1035376
Number of successful extensions: 3419
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3414
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)