>dbj|AK102332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090N02, full
           insert sequence
          Length = 2117

 Score =  452 bits (228), Expect = e-124
 Identities = 312/340 (91%)
 Strand = Plus / Plus

                                                                       
Query: 100 gcgagatgctggtcccgtggggcggggtcgggtgctgcctcagcgccgcggcgctctatc 159
           |||||||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 183 gcgagatgttgatcccatggggcggagtcgggtgctgcctcagcgccgcggcgctgtatc 242

                                                                       
Query: 160 tcctcgggaggagcagcgggagggacgcggaggtgctgcgatcggtggcgaggacaggca 219
           ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | || |
Sbjct: 243 tcctcgggaggagcagcggcagggatgcggaggtgctgcgatcggtggcgagggccggaa 302

                                                                       
Query: 220 gcctgaaggatttggctgctatcttggacactgcaagtaaagtcctgccacttgtagtgg 279
           ||  |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 303 gcacgaaggatttggctgctatattggacactgcaagtaaggtcctgccacttgtagtgg 362

                                                                       
Query: 280 cagtttctgggcgagttagttcagatacgccacttatatgccaacaaagtggtatgagag 339
           |||| ||||| || ||| |||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 363 cagtctctggacgggttggttcagatacaccacttatctgccaacaaagtggcatgagag 422

                                                                       
Query: 340 gtgtgatagtcgaggaaacggcagagcaacacttcctgaagcacaatgatgctggatcct 399
           |||| ||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| |
Sbjct: 423 gtgtaatagtagaggaaacggcagaacaacacttcctaaagcacaacgatgctggatcat 482

                                                   
Query: 400 ggattcaagattctgctgtgatgctttctgttagcaaaga 439
           ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 483 ggattcaagattccgctgtgatgctttctgttagcaaaga 522

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  165 bits (83), Expect = 1e-37
 Identities = 116/127 (91%)
 Strand = Plus / Minus

                                                                            
Query: 234      gctgctatcttggacactgcaagtaaagtcctgccacttgtagtggcagtttctgggcga 293
                |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || 
Sbjct: 27000303 gctgctatattggacactgcaagtaaggtcctgccacttgtagtggcagtctctggacgg 27000244

                                                                            
Query: 294      gttagttcagatacgccacttatatgccaacaaagtggtatgagaggtgtgatagtcgag 353
                ||| |||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |||
Sbjct: 27000243 gttggttcagatacaccacttatctgccaacaaagtggcatgagaggtgtaatagtagag 27000184

                       
Query: 354      gaaacgg 360
                |||||||
Sbjct: 27000183 gaaacgg 27000177



 Score =  121 bits (61), Expect = 2e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                            
Query: 359      ggcagagcaacacttcctgaagcacaatgatgctggatcctggattcaagattctgctgt 418
                |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 27000085 ggcagaacaacacttcctaaagcacaacgatgctggatcatggattcaagattccgctgt 27000026

                                     
Query: 419      gatgctttctgttagcaaaga 439
                |||||||||||||||||||||
Sbjct: 27000025 gatgctttctgttagcaaaga 27000005



 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                            
Query: 100      gcgagatgctggtcccgtggggcggggtcgggtgctgcctcagcgccgcggcgctctatc 159
                |||||||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 27001025 gcgagatgttgatcccatggggcggagtcgggtgctgcctcagcgccgcggcgctgtatc 27000966

                                   
Query: 160      tcctcgggaggagcagcgg 178
                |||||||||||||||||||
Sbjct: 27000965 tcctcgggaggagcagcgg 27000947



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 180      agggacgcggaggtgctgcgatcggtggcgaggacaggcagcctgaaggatttgg 234
                ||||| ||||||||||||||||||||||||||| | || |||  |||||||||||
Sbjct: 27000861 agggatgcggaggtgctgcgatcggtggcgagggccggaagcacgaaggatttgg 27000807

>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1316_A04
          Length = 87144

 Score =  165 bits (83), Expect = 1e-37
 Identities = 116/127 (91%)
 Strand = Plus / Minus

                                                                         
Query: 234   gctgctatcttggacactgcaagtaaagtcctgccacttgtagtggcagtttctgggcga 293
             |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || 
Sbjct: 64781 gctgctatattggacactgcaagtaaggtcctgccacttgtagtggcagtctctggacgg 64722

                                                                         
Query: 294   gttagttcagatacgccacttatatgccaacaaagtggtatgagaggtgtgatagtcgag 353
             ||| |||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |||
Sbjct: 64721 gttggttcagatacaccacttatctgccaacaaagtggcatgagaggtgtaatagtagag 64662

                    
Query: 354   gaaacgg 360
             |||||||
Sbjct: 64661 gaaacgg 64655



 Score =  121 bits (61), Expect = 2e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                         
Query: 359   ggcagagcaacacttcctgaagcacaatgatgctggatcctggattcaagattctgctgt 418
             |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 64563 ggcagaacaacacttcctaaagcacaacgatgctggatcatggattcaagattccgctgt 64504

                                  
Query: 419   gatgctttctgttagcaaaga 439
             |||||||||||||||||||||
Sbjct: 64503 gatgctttctgttagcaaaga 64483



 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                         
Query: 100   gcgagatgctggtcccgtggggcggggtcgggtgctgcctcagcgccgcggcgctctatc 159
             |||||||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 65503 gcgagatgttgatcccatggggcggagtcgggtgctgcctcagcgccgcggcgctgtatc 65444

                                
Query: 160   tcctcgggaggagcagcgg 178
             |||||||||||||||||||
Sbjct: 65443 tcctcgggaggagcagcgg 65425



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 180   agggacgcggaggtgctgcgatcggtggcgaggacaggcagcctgaaggatttgg 234
             ||||| ||||||||||||||||||||||||||| | || |||  |||||||||||
Sbjct: 65339 agggatgcggaggtgctgcgatcggtggcgagggccggaagcacgaaggatttgg 65285

>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0427D10
          Length = 154192

 Score =  165 bits (83), Expect = 1e-37
 Identities = 116/127 (91%)
 Strand = Plus / Minus

                                                                        
Query: 234  gctgctatcttggacactgcaagtaaagtcctgccacttgtagtggcagtttctgggcga 293
            |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || 
Sbjct: 3544 gctgctatattggacactgcaagtaaggtcctgccacttgtagtggcagtctctggacgg 3485

                                                                        
Query: 294  gttagttcagatacgccacttatatgccaacaaagtggtatgagaggtgtgatagtcgag 353
            ||| |||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |||
Sbjct: 3484 gttggttcagatacaccacttatctgccaacaaagtggcatgagaggtgtaatagtagag 3425

                   
Query: 354  gaaacgg 360
            |||||||
Sbjct: 3424 gaaacgg 3418



 Score =  121 bits (61), Expect = 2e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                        
Query: 359  ggcagagcaacacttcctgaagcacaatgatgctggatcctggattcaagattctgctgt 418
            |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 3326 ggcagaacaacacttcctaaagcacaacgatgctggatcatggattcaagattccgctgt 3267

                                 
Query: 419  gatgctttctgttagcaaaga 439
            |||||||||||||||||||||
Sbjct: 3266 gatgctttctgttagcaaaga 3246



 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                        
Query: 100  gcgagatgctggtcccgtggggcggggtcgggtgctgcctcagcgccgcggcgctctatc 159
            |||||||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 4266 gcgagatgttgatcccatggggcggagtcgggtgctgcctcagcgccgcggcgctgtatc 4207

                               
Query: 160  tcctcgggaggagcagcgg 178
            |||||||||||||||||||
Sbjct: 4206 tcctcgggaggagcagcgg 4188



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 180  agggacgcggaggtgctgcgatcggtggcgaggacaggcagcctgaaggatttgg 234
            ||||| ||||||||||||||||||||||||||| | || |||  |||||||||||
Sbjct: 4102 agggatgcggaggtgctgcgatcggtggcgagggccggaagcacgaaggatttgg 4048

>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence
          Length = 133324

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 359  ggcagagcaacacttcctgaagcacaatgatgctggatcctggattcaagattctgc 415
            |||||||||||| || || || |||| ||||||||| |||||||| |||||||||||
Sbjct: 4565 ggcagagcaacattttctcaaacacagtgatgctggttcctggatacaagattctgc 4509

>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3'
              end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B,
              two novel genes, the 5' end of the HARS2 gene for
              histidyl-tRNA synthetase 2, a pseudogene similar to part of
              homeobox proteins and two CpG islands, complete sequence
          Length = 149933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 400    ggattcaagattctgctgtgatgct 424
              |||||||||||||||| ||||||||
Sbjct: 104014 ggattcaagattctgcggtgatgct 104038

>emb|AL031291.3|HS796F18 Human DNA sequence from clone RP4-796F18 on chromosome 1p36.11-36.33
             Contains the gene for transitional epithelia response
             protein (TERE1) and a ubiquitin-conjugating enzyme E2
             variant 2 (UBE2V2) pseudogene, complete sequence
          Length = 118968

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   ggaggagcagcgggagggacg 186
             |||||||||||||||||||||
Sbjct: 96610 ggaggagcagcgggagggacg 96630

>gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152449

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 321    caacaaagtggtatgagaggtgtgatagt 349
              ||||||||||| | |||||||||||||||
Sbjct: 141578 caacaaagtgggaagagaggtgtgatagt 141550

>gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, complete sequence
          Length = 206936

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   aatgatgctggatcctggat 403
             ||||||||||||||||||||
Sbjct: 55878 aatgatgctggatcctggat 55859

>ref|XM_752615.1| Ustilago maydis 521 hypothetical protein (UM01561.1) partial mRNA
          Length = 1293

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   cgcgccggatctgctgctcg 82
            ||||||||||||||||||||
Sbjct: 1091 cgcgccggatctgctgctcg 1072

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   cgcgccggatctgctgctcg 82
            ||||||||||||||||||||
Sbjct: 2456 cgcgccggatctgctgctcg 2475

>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2
          Length = 180915

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    acaaagtggtatgagaggtg 342
              ||||||||||||||||||||
Sbjct: 112857 acaaagtggtatgagaggtg 112876

>gb|AC018452.11| Homo sapiens chromosome 3 BAC RP11-23D24 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 171523

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    gcgggagggacgcggaggtg 194
              ||||||||||||||||||||
Sbjct: 160334 gcgggagggacgcggaggtg 160315

>ref|XM_678018.1| PREDICTED: Danio rerio similar to cyclin K (LOC555493), mRNA
          Length = 2468

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  cgggaggagcagcgggaggg 183
            ||||||||||||||||||||
Sbjct: 1791 cgggaggagcagcgggaggg 1772

>gb|AY051143.1| Homo sapiens Gal beta 1,3(4) GlcNAc alpha 2,3-sialyltransferase
           (ST3GalIII) mRNA, complete cds
          Length = 2221

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 taaagtcctgccacttgtag 276
           ||||||||||||||||||||
Sbjct: 837 taaagtcctgccacttgtag 818

>gb|AC171018.2| Gallus gallus BAC clone CH261-11F14 from chromosome ul, complete
             sequence
          Length = 216886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   acacttcctgaagcacaatg 387
             ||||||||||||||||||||
Sbjct: 21307 acacttcctgaagcacaatg 21326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,412,145
Number of Sequences: 3902068
Number of extensions: 3412145
Number of successful extensions: 69224
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69162
Number of HSP's gapped (non-prelim): 62
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)