ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdj03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 509 bits (257), Expect = e-141 Identities = 393/438 (89%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 189 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 142 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 195 Query: 190 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 246 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 196 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 255 Query: 247 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 306 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 256 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 315 Query: 307 gcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcaca 366 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 316 gcaggatgtgactggattcatgttgatgtcatggatggacgttttgtgccaaatatcaca 375 Query: 367 attggaccattaattgttgatgctctgcgtccagtgactgatcttccattggatgtgcat 426 || ||||| || |||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 376 atcggacctttggttgttgatgctctgcggccagtcactgatcttccgttggatgtgcat 435 Query: 427 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatatt 486 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 436 ctgatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatatt 495 Query: 487 gttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagatt 546 |||||||| |||||||||||| | ||||||||||||| |||||||||||| | ||||| Sbjct: 496 gttagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatc 555 Query: 547 aaaagtctaggagcaaag 564 |||||||| ||||||||| Sbjct: 556 aaaagtcttggagcaaag 573
>dbj|AK099215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084F18, full insert sequence Length = 1122 Score = 509 bits (257), Expect = e-141 Identities = 393/438 (89%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 189 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 98 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 151 Query: 190 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 246 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 152 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 211 Query: 247 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 306 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 212 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 271 Query: 307 gcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcaca 366 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 272 gcaggatgtgactggattcatgttgatgtcatggatggacgttttgtgccaaatatcaca 331 Query: 367 attggaccattaattgttgatgctctgcgtccagtgactgatcttccattggatgtgcat 426 || ||||| || |||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 332 atcggacctttggttgttgatgctctgcggccagtcactgatcttccgttggatgtgcat 391 Query: 427 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatatt 486 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 392 ctgatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatatt 451 Query: 487 gttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagatt 546 |||||||| |||||||||||| | ||||||||||||| |||||||||||| | ||||| Sbjct: 452 gttagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatc 511 Query: 547 aaaagtctaggagcaaag 564 |||||||| ||||||||| Sbjct: 512 aaaagtcttggagcaaag 529
>dbj|AK066306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061C21, full insert sequence Length = 1276 Score = 509 bits (257), Expect = e-141 Identities = 393/438 (89%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 189 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 131 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 184 Query: 190 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 246 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 185 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 244 Query: 247 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 306 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 245 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 304 Query: 307 gcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcaca 366 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 305 gcaggatgtgactggattcatgttgatgtcatggatggacgttttgtgccaaatatcaca 364 Query: 367 attggaccattaattgttgatgctctgcgtccagtgactgatcttccattggatgtgcat 426 || ||||| || |||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 365 atcggacctttggttgttgatgctctgcggccagtcactgatcttccgttggatgtgcat 424 Query: 427 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatatt 486 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 425 ctgatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatatt 484 Query: 487 gttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagatt 546 |||||||| |||||||||||| | ||||||||||||| |||||||||||| | ||||| Sbjct: 485 gttagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatc 544 Query: 547 aaaagtctaggagcaaag 564 |||||||| ||||||||| Sbjct: 545 aaaagtcttggagcaaag 562
>dbj|AK061772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C12, full insert sequence Length = 1113 Score = 509 bits (257), Expect = e-141 Identities = 393/438 (89%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 189 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 114 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 167 Query: 190 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 246 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 168 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 227 Query: 247 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 306 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 228 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 287 Query: 307 gcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcaca 366 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 288 gcaggatgtgactggattcatgttgatgtcatggatggacgttttgtgccaaatatcaca 347 Query: 367 attggaccattaattgttgatgctctgcgtccagtgactgatcttccattggatgtgcat 426 || ||||| || |||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 348 atcggacctttggttgttgatgctctgcggccagtcactgatcttccgttggatgtgcat 407 Query: 427 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatatt 486 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 408 ctgatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatatt 467 Query: 487 gttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagatt 546 |||||||| |||||||||||| | ||||||||||||| |||||||||||| | ||||| Sbjct: 468 gttagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatc 527 Query: 547 aaaagtctaggagcaaag 564 |||||||| ||||||||| Sbjct: 528 aaaagtcttggagcaaag 545
>gb|AF047444.1|AF047444 Oryza sativa ribulose-5-phosphate-3-epimerase (RPE) mRNA, complete cds Length = 1050 Score = 509 bits (257), Expect = e-141 Identities = 393/438 (89%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 189 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 142 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 195 Query: 190 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 246 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 196 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 255 Query: 247 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 306 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 256 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 315 Query: 307 gcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcaca 366 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 316 gcaggatgtgactggattcatgttgatgtcatggatggacgttttgtgccaaatatcaca 375 Query: 367 attggaccattaattgttgatgctctgcgtccagtgactgatcttccattggatgtgcat 426 || ||||| || |||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 376 atcggacctttggttgttgatgctctgcggccagtcactgatcttccgttggatgtgcat 435 Query: 427 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatatt 486 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 436 ctgatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatatt 495 Query: 487 gttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagatt 546 |||||||| |||||||||||| | ||||||||||||| |||||||||||| | ||||| Sbjct: 496 gttagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatc 555 Query: 547 aaaagtctaggagcaaag 564 |||||||| ||||||||| Sbjct: 556 aaaagtcttggagcaaag 573
>gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 Score = 494 bits (249), Expect = e-136 Identities = 425/483 (87%), Gaps = 3/483 (0%) Strand = Plus / Plus Query: 85 cagatggcgtcgccctcctcctcgctctgctccagcctcggctacccgcgcgccgcctcc 144 ||||||||| |||| || || ||||| ||||||||| ||| || || ||| |||||||| Sbjct: 259 cagatggcgacgccgtcgtcgtcgctttgctccagcttcgcctccctgcggaccgcctcc 318 Query: 145 ctcggcggccgccgccgcgtcggcttctcctcgtccaggaagctattccaagtgagggca 204 ||||| || ||| || ||| || |||| || |||||||| |||||| ||||||||| Sbjct: 319 atcggccacccccgtggcatcgcctcctccacgcccaggaaggcattccatgtgagggca 378 Query: 205 tcaa---gggtcgacaagttctccaagagcgacatcattgtgtccccttccattctctct 261 ||| |||| ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 379 tcagctcgggttgacaaattctcaaagagtgacatcatcgtgtccccttcgattctgtct 438 Query: 262 gcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactgg 321 ||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 439 gcaaactttgcgaagcttggtgatcaggtaaaagctgtggaggtggcaggatgcgactgg 498 Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct: 499 attcatgttgatgtcatggatgggcgctttgtgccaaacatcacaattggacccttggtt 558 Query: 382 gttgatgctctgcgtccagtgactgatcttccattggatgtgcatctgatgattgtggaa 441 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 559 gttgatgctctgcgtccagtgactgatcttccgttggatgtacatctgatgattgtggaa 618 Query: 442 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 501 |||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 619 cctgagcagcgagtccctgattttatcaaggcaggtgctgatattgttagtgtccactgt 678 Query: 502 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 561 || || ||| | ||||||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 679 gaacagacatcgaccatccatttgcaccgaacagtcaatcagattaaaagtctaggagca 738 Query: 562 aag 564 ||| Sbjct: 739 aag 741
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 133/143 (93%) Strand = Plus / Plus Query: 287 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3696633 aggtaaaagctgtggaggtggcaggatgtgactggattcatgttgatgtcatggatggac 3696692 Query: 347 gctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactg 406 | |||||||||||||||||||| ||||| || |||||||||||||||| ||||| |||| Sbjct: 3696693 gttttgtgccaaatatcacaatcggacctttggttgttgatgctctgcggccagtcactg 3696752 Query: 407 atcttccattggatgtgcatctg 429 ||||||| ||||||||||||||| Sbjct: 3696753 atcttccgttggatgtgcatctg 3696775 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 429 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 488 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 3696874 gatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatattgt 3696933 Query: 489 tagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 537 |||||| |||||||||||| | ||||||||||||| |||||||||||| Sbjct: 3696934 tagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtc 3696982 Score = 109 bits (55), Expect = 1e-20 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 189 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 245 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 3696384 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 3696443 Query: 246 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 290 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 3696444 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 3696488 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgcc 157 ||||||||||||||||||||| |||||| Sbjct: 3695794 ccgcgcgccgcctccctcggccgccgcc 3695821
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 204 bits (103), Expect = 2e-49 Identities = 133/143 (93%) Strand = Plus / Minus Query: 287 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 84744 aggtaaaagctgtggaggtggcaggatgtgactggattcatgttgatgtcatggatggac 84685 Query: 347 gctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactg 406 | |||||||||||||||||||| ||||| || |||||||||||||||| ||||| |||| Sbjct: 84684 gttttgtgccaaatatcacaatcggacctttggttgttgatgctctgcggccagtcactg 84625 Query: 407 atcttccattggatgtgcatctg 429 ||||||| ||||||||||||||| Sbjct: 84624 atcttccgttggatgtgcatctg 84602 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 429 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 488 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 84503 gatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatattgt 84444 Query: 489 tagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 537 |||||| |||||||||||| | ||||||||||||| |||||||||||| Sbjct: 84443 tagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtc 84395 Score = 109 bits (55), Expect = 1e-20 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 189 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 245 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 84993 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 84934 Query: 246 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 290 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 84933 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 84889 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 130 ccgcgcgccgcctccctcggcggccgcc 157 ||||||||||||||||||||| |||||| Sbjct: 85583 ccgcgcgccgcctccctcggccgccgcc 85556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 133/143 (93%) Strand = Plus / Plus Query: 287 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3696744 aggtaaaagctgtggaggtggcaggatgtgactggattcatgttgatgtcatggatggac 3696803 Query: 347 gctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactg 406 | |||||||||||||||||||| ||||| || |||||||||||||||| ||||| |||| Sbjct: 3696804 gttttgtgccaaatatcacaatcggacctttggttgttgatgctctgcggccagtcactg 3696863 Query: 407 atcttccattggatgtgcatctg 429 ||||||| ||||||||||||||| Sbjct: 3696864 atcttccgttggatgtgcatctg 3696886 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 429 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 488 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 3696985 gatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatattgt 3697044 Query: 489 tagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 537 |||||| |||||||||||| | ||||||||||||| |||||||||||| Sbjct: 3697045 tagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtc 3697093 Score = 109 bits (55), Expect = 1e-20 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 189 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 245 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 3696495 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 3696554 Query: 246 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 290 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 3696555 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 3696599 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 130 ccgcgcgccgcctccctcggcggccgcc 157 ||||||||||||||||||||| |||||| Sbjct: 3695905 ccgcgcgccgcctccctcggccgccgcc 3695932
>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase mature form Length = 849 Score = 182 bits (92), Expect = 8e-43 Identities = 242/292 (82%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 273 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 116 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 175 Query: 274 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 333 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 176 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 235 Query: 334 gtcatggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctg 393 || |||||||| || ||||| |||||||| || |||||||| | | |||||||| || Sbjct: 236 gtaatggatggtcgttttgttccaaatattactattggacctctggtggttgatgccttg 295 Query: 394 cgtccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcga 453 || || ||||| ||||| ||| | |||||||||||||||||||| ||||| ||||||||| Sbjct: 296 cgacctgtgacagatctcccactagatgtgcatctgatgattgtagaaccagagcagcga 355 Query: 454 attccagattttatcaaggcaggtgctgatattgttagcgtccactgtgagc 505 | ||||| || ||||| || ||||||||||| || || ||||||||||||| Sbjct: 356 gtcccagacttcatcaaagctggtgctgatatagtgagtgtccactgtgagc 407
>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase transit form Length = 993 Score = 182 bits (92), Expect = 8e-43 Identities = 242/292 (82%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 273 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 260 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 319 Query: 274 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 333 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 320 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 379 Query: 334 gtcatggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctg 393 || |||||||| || ||||| |||||||| || |||||||| | | |||||||| || Sbjct: 380 gtaatggatggtcgttttgttccaaatattactattggacctctggtggttgatgccttg 439 Query: 394 cgtccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcga 453 || || ||||| ||||| ||| | |||||||||||||||||||| ||||| ||||||||| Sbjct: 440 cgacctgtgacagatctcccactagatgtgcatctgatgattgtagaaccagagcagcga 499 Query: 454 attccagattttatcaaggcaggtgctgatattgttagcgtccactgtgagc 505 | ||||| || ||||| || ||||||||||| || || ||||||||||||| Sbjct: 500 gtcccagacttcatcaaagctggtgctgatatagtgagtgtccactgtgagc 551
>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1230 Score = 182 bits (92), Expect = 8e-43 Identities = 242/292 (82%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 273 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 225 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 284 Query: 274 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 333 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 285 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 344 Query: 334 gtcatggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctg 393 || |||||||| || ||||| |||||||| || |||||||| | | |||||||| || Sbjct: 345 gtaatggatggtcgttttgttccaaatattactattggacctctggtggttgatgccttg 404 Query: 394 cgtccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcga 453 || || ||||| ||||| ||| | |||||||||||||||||||| ||||| ||||||||| Sbjct: 405 cgacctgtgacagatctcccactagatgtgcatctgatgattgtagaaccagagcagcga 464 Query: 454 attccagattttatcaaggcaggtgctgatattgttagcgtccactgtgagc 505 | ||||| || ||||| || ||||||||||| || || ||||||||||||| Sbjct: 465 gtcccagacttcatcaaagctggtgctgatatagtgagtgtccactgtgagc 516
>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate 3-epimerase mRNA, complete cds Length = 1198 Score = 182 bits (92), Expect = 8e-43 Identities = 242/292 (82%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 273 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 217 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 276 Query: 274 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 333 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 277 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 336 Query: 334 gtcatggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctg 393 || |||||||| || ||||| |||||||| || |||||||| | | |||||||| || Sbjct: 337 gtaatggatggtcgttttgttccaaatattactattggacctctggtggttgatgccttg 396 Query: 394 cgtccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcga 453 || || ||||| ||||| ||| | |||||||||||||||||||| ||||| ||||||||| Sbjct: 397 cgacctgtgacagatctcccactagatgtgcatctgatgattgtagaaccagagcagcga 456 Query: 454 attccagattttatcaaggcaggtgctgatattgttagcgtccactgtgagc 505 | ||||| || ||||| || ||||||||||| || || ||||||||||||| Sbjct: 457 gtcccagacttcatcaaagctggtgctgatatagtgagtgtccactgtgagc 508
>gb|AF015274.1|AF015274 Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1259 Score = 145 bits (73), Expect = 2e-31 Identities = 211/257 (82%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 277 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 336 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 337 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 396 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 397 cccaacattactatcggacctctcgtggttgatgctttgcggcctgtgacagatcttcct 456 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 457 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 516 Query: 475 ggtgctgatattgttag 491 ||||| ||||||||||| Sbjct: 517 ggtgcagatattgttag 533
>ref|NM_125534.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.2 mRNA, complete cds Length = 1271 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 310 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 369 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 370 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 429 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 430 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 489 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 490 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 549 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 550 ggtgcagatattgt 563
>ref|NM_180909.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.1 mRNA, complete cds Length = 1408 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 441 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 500 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 501 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 560 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 561 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 620 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 621 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 680 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 681 ggtgcagatattgt 694
>gb|AY091381.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 877 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 172 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 231 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 232 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 291 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 292 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 351 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 352 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 411 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 412 ggtgcagatattgt 425
>gb|AY045855.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 1280 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 304 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 363 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 364 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 423 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 424 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 483 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 484 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 543 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 544 ggtgcagatattgt 557
>emb|BX830111.1|CNS0A1DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 401 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 460 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 461 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 520 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 521 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 580 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 581 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 640 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 641 ggtgcagatattgt 654
>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1311 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 401 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 460 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 461 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 520 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 521 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 580 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 581 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 640 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 641 ggtgcagatattgt 654
>emb|BX832763.1|CNS0A101 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 412 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 471 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 472 gcagtagagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 531 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 532 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 591 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 592 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 651 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 652 ggtgcagatattgt 665
>emb|BX832544.1|CNS0A11A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 413 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 472 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || |||||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 473 gcagttgagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 532 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 533 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 592 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 593 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 652 Query: 475 ggtgctgatattgt 488 ||| | |||||||| Sbjct: 653 ggtacagatattgt 666
>emb|BX832214.1|CNS0A123 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 235 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 294 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 441 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 500 Query: 295 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtg 354 || || ||| ||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 501 gcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggtcgttttgtt 560 Query: 355 ccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactgatcttcca 414 || || || || || ||||| | | ||||||||| |||| || ||||| |||||||| Sbjct: 561 cccaacattactatcggacctctcgtggttgatgctttgcgccctgtgacagatcttcct 620 Query: 415 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 474 |||||||| ||||||||||| |||||||| |||||| || | || ||||| ||||| ||| Sbjct: 621 ttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttcatcaaagca 680 Query: 475 ggtgctgatattgt 488 ||||| |||||||| Sbjct: 681 ggtgcagatattgt 694
>gb|BT014306.1| Lycopersicon esculentum clone 133557F, mRNA sequence Length = 1257 Score = 125 bits (63), Expect = 2e-25 Identities = 234/291 (80%) Strand = Plus / Plus Query: 217 aagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgccaag 276 |||||||| || |||||||| ||||| || || ||||| || ||||| |||||| | || Sbjct: 299 aagttctcgaaaagcgacattattgtttctccatccatcctttctgctaacttttctaaa 358 Query: 277 cttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtc 336 | || || ||||| ||||| |||||| |||||| || |||||||||||||| ||||| Sbjct: 359 ttaggagagcaggtgaaagcagttgagcaggcaggctgcgactggattcatgtagatgtg 418 Query: 337 atggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgt 396 |||||||| || ||||| |||||||| || |||||||| | | |||||| | |||| Sbjct: 419 atggatggtcgatttgttccaaatataactattggaccccttgtagttgattccttgcgc 478 Query: 397 ccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcgaatt 456 || | || ||||||||| |||||||||||||||||||||| |||||||| ||| || | Sbjct: 479 cctatcacagatcttccactggatgtgcatctgatgattgtcgaacctgaccagagagta 538 Query: 457 ccagattttatcaaggcaggtgctgatattgttagcgtccactgtgagcaa 507 || || || || || ||||||||||||||||| || || || ||||||||| Sbjct: 539 cctgacttcataaaagcaggtgctgatattgtcagtgttcattgtgagcaa 589
>emb|Z50098.1|STPPEPIMR S.tuberosum mRNA for pentose-5-phosphate-3-epimerase Length = 1055 Score = 125 bits (63), Expect = 2e-25 Identities = 234/291 (80%) Strand = Plus / Plus Query: 217 aagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgccaag 276 |||||||| || |||||||| ||||| || || ||||| || ||||| |||||| | || Sbjct: 153 aagttctcaaaaagcgacattattgtttctccgtccatcctttctgctaacttttctaaa 212 Query: 277 cttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtc 336 | || || ||||| ||||| ||||| |||||| ||||||||||||||||| ||||| Sbjct: 213 ttaggagagcaggtgaaagcaattgagcaggcaggctgtgactggattcatgtagatgtg 272 Query: 337 atggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgt 396 ||||| || || ||||| |||||||| || |||||||| | | |||||| | |||| Sbjct: 273 atggacggtcgatttgttccaaatataactattggaccccttgtagttgattccttgcgc 332 Query: 397 ccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcgaatt 456 || | || ||||| |||||||||||||||||||||||||| |||||||| ||| || | Sbjct: 333 cctatcacagatctaccattggatgtgcatctgatgattgtcgaacctgaccagagagta 392 Query: 457 ccagattttatcaaggcaggtgctgatattgttagcgtccactgtgagcaa 507 || || || || || ||||||||||||||||| || || |||||||||||| Sbjct: 393 cctgacttcataaaagcaggtgctgatattgtcagtgttcactgtgagcaa 443
>dbj|AP004930.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093a, complete sequence Length = 42990 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 287 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgggc 346 |||| ||||| || ||| ||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 845 aggttaaagcagtggagttggcaggttgtgattggattcatgttgatgtcatggatggcc 904 Query: 347 gctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgactg 406 ||||||| |||||||| ||||||||||| | || |||||||| |||| || ||||| | Sbjct: 905 gctttgttccaaatattacaattggacctcttatagttgatgcattgcgccctgtgacag 964 Query: 407 atcttccattggatgt 422 ||||||| |||||||| Sbjct: 965 atcttcccttggatgt 980 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 429 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctga 482 ||||||||| |||||||| ||||| | || ||||||||||||||||| ||||| Sbjct: 1068 gatgattgtagaacctgaacagcgggtgccggattttatcaaggcaggggctga 1121
>emb|BX831851.1|CNS0A0WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 286 caggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatggg 345 ||||||| ||| |||||| ||||||| ||| | || |||||||||||||| ||||| || Sbjct: 507 caggtaagagcagttgagttggcaggttgtcattgcattcatgttgatgtgatggacggt 566 Query: 346 cgctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgact 405 || ||||| || || || || || ||||| || | ||||||||| |||| || ||||| Sbjct: 567 cgttttgttcccaacattacgatcggacctttcgtggttgatgctttgcgccctgtgaca 626 Query: 406 gatcttccattggatgtgcatctgatgattgtggaacctgagcagcgaattccagatttt 465 |||||||| |||||||| ||||||||||| |||||||| |||||| || | || ||||| Sbjct: 627 gatcttcctttggatgttcatctgatgatagtggaacccgagcagagagtaccggatttc 686 Query: 466 atcaaggcaggtgctgatattgt 488 ||||| |||||| | |||||||| Sbjct: 687 atcaaagcaggttcagatattgt 709
>dbj|AK064675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F02, full insert sequence Length = 1689 Score = 109 bits (55), Expect = 1e-20 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 189 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 245 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 700 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 641 Query: 246 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 290 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 640 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 596 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 130 ccgcgcgccgcctccctcggcggccgcc 157 ||||||||||||||||||||| |||||| Sbjct: 1063 ccgcgcgccgcctccctcggccgccgcc 1036
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 107 bits (54), Expect = 4e-20 Identities = 105/122 (86%) Strand = Plus / Plus Query: 307 gcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcaca 366 ||||| ||||| ||||||||||||||||| |||||||| || ||||| || || || ||| Sbjct: 89369 gcaggctgtgattggattcatgttgatgtgatggatggtcgttttgttcccaacattaca 89428 Query: 367 attggaccattaattgttgatgctctgcgtccagtgactgatcttccattggatgtgcat 426 ||||||||| | | |||||||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 89429 attggaccactcgtggttgatgctctgcgccctgtgacagatcttccattggatgttcat 89488 Query: 427 ct 428 || Sbjct: 89489 ct 89490 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 429 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 488 |||||| ||||||||||| ||| || | |||||||| ||||| |||||||| |||||| | Sbjct: 89572 gatgatagtggaacctgaacagagagtgccagatttcatcaaagcaggtgcagatattat 89631 Query: 489 tagcgtccactgtgagcaa 507 ||| || || ||||||||| Sbjct: 89632 tagtgtacattgtgagcaa 89650
>gb|AF369887.1| Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1156 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 273 |||||||| || || ||||| |||||||| || || || ||||| || || |||||||| Sbjct: 174 gacaagttttcaaaaagcgatatcattgtttctccatctattctttccgccaactttgca 233 Query: 274 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 333 || | || |||||||||||||| || ||| |||| || ||||| ||||||||| ||||| Sbjct: 234 aaattgggagaacaggtaaaagcagtggagttggctggttgtgattggattcatattgat 293 Query: 334 gtcatggatgggcgctttgtgccaaatatcacaattggaccattaattgttgatgctctg 393 || ||||| || |||||||| ||||| || ||||||||||| | | |||||||| | Sbjct: 294 gttatggacggtcgctttgttccaaacattacaattggacctcttgtcgttgatgcatta 353 Query: 394 cgtccagtgactgatcttccattggatgtgcatctgatgattgtggaacctgagcagcga 453 || || ||||| ||| | || |||||||| || ||||||||||| ||||| || ||||| Sbjct: 354 cgccctgtgacagatttacctttggatgtacacctgatgattgtagaaccagaccagcgg 413 Query: 454 attccagattttatcaaggcaggtgctga 482 | |||||||| ||||| ||||| ||||| Sbjct: 414 gtgccagatttcatcaaagcaggagctga 442
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13 Length = 80376 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 286 caggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatggg 345 ||||||||||| || ||| ||||||| ||||| ||||||||||||||||||||||| || Sbjct: 55814 caggtaaaagcagtggagttggcaggttgtgattggattcatgttgatgtcatggacggt 55755 Query: 346 cgctttgtgccaaatatcacaattggaccattaattgttgatgctctgcgtccagtgact 405 || ||||| || || || || || ||||| | | ||||||||| |||| || ||||| Sbjct: 55754 cgttttgttcccaacattactatcggacctctcgtggttgatgctttgcgccctgtgaca 55695 Query: 406 gatcttccattggatgtgcatctg 429 |||||||| |||||||| |||||| Sbjct: 55694 gatcttcctttggatgttcatctg 55671
>gb|AY386314.1| Bacillus methanolicus strain MGA3 plasmid pBM19, complete sequence Length = 19167 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 ||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||| Sbjct: 4445 attcatgttgatgtcatggatggtcattttgtgccaaatataacaattggcccattaatt 4504 Query: 382 gt 383 || Sbjct: 4505 gt 4506
>emb|AJ297425.1|DCA297425 Daucus carota chloroplast partial mRNA for putative ribulose-phosphate 3-epimerase (rpe gene) Length = 128 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 306 ggcaggatgtgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcac 365 |||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||| || Sbjct: 2 ggcaggttgtgactggatacatgttgatgtcatggatggtcgctttgtaccaaatataac 61 Query: 366 aattgg 371 ||||| Sbjct: 62 tattgg 67
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 315 tgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggacc 374 |||||||||||| |||||||| |||||||| ||||||||||| || ||||| || || || Sbjct: 1190907 tgactggattcacgttgatgtgatggatggtcgctttgtgcccaacatcaccatcggtcc 1190966 Query: 375 attaattgttgatgctct 392 ||| || ||||| ||||| Sbjct: 1190967 attgatcgttgaggctct 1190984
>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11 Length = 347636 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 315 tgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattgg 371 |||||||||||| || ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 242816 tgactggattcacgtcgatgtgatggacgggcgctttgtgccgaatatcactattgg 242760 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 409 cttccattggatgtgcatctgatgat 434 ||||| |||||||||||||||||||| Sbjct: 242722 cttccgttggatgtgcatctgatgat 242697
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7 Length = 349323 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattgg 371 |||||||||||||| ||||||||||| || || || |||||||||||||| ||||| Sbjct: 274433 gactggattcatgtggatgtcatggacggccgattcgtgccaaatatcacgattgg 274488
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggacc 374 |||||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| Sbjct: 3745628 gactggatccacgtcgatgtcatggacgggcgctttgtgcccaacatcacgattggacc 3745570
>gb|AF173670.1|AF173670 Beta vulgaris clone PPE110UNI pentose-5-phosphate 3-epimerase (Ppe) gene, partial sequence Length = 724 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 429 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 488 ||||||||||||||| || |||||| ||||||| || || || || ||||||||||| || Sbjct: 173 gatgattgtggaaccagatcagcgagttccagacttcattaaagctggtgctgatatagt 232 Query: 489 tagcgtccactgtgagcaa 507 || || |||||||||||| Sbjct: 233 gagtgttcactgtgagcaa 251
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 315 tgactggattcatgttgatgtcatggatgggcgctttgtgccaaa 359 ||||||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 1081835 tgactggctgcatgttgatgttatggatgggtgctttgtgccaaa 1081791
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 |||||||| ||||| |||||||| | || || |||||||| || ||||||||||||||| Sbjct: 3697835 attcatgtcgatgtaatggatggacatttcgtaccaaatattacgattggaccattaatt 3697776 Query: 382 gt 383 || Sbjct: 3697775 gt 3697774
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 |||||||| ||||| |||||||| | || || |||||||| || ||||||||||||||| Sbjct: 3676288 attcatgtcgatgtaatggatggacatttcgtaccaaatattacgattggaccattaatt 3676229 Query: 382 gt 383 || Sbjct: 3676228 gt 3676227
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 |||||||| ||||| |||||||| | || || |||||||| || ||||||||||||||| Sbjct: 3676856 attcatgtcgatgtaatggatggacatttcgtaccaaatattacgattggaccattaatt 3676797 Query: 382 gt 383 || Sbjct: 3676796 gt 3676795
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 |||||||| ||||| |||||||| | || || |||||||| || ||||||||||||||| Sbjct: 3756720 attcatgtcgatgtaatggatggacatttcgtaccaaatattacgattggaccattaatt 3756661 Query: 382 gt 383 || Sbjct: 3756660 gt 3756659
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcac 365 |||||||| ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct: 2149109 gactggatccatgtggatgtgatggatggccgctttgtgcccaacatcac 2149060
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 |||||||| ||||| |||||||| | || || |||||||| || ||||||||||||||| Sbjct: 3676161 attcatgtcgatgtaatggatggacatttcgtaccaaatattacgattggaccattaatt 3676102 Query: 382 gt 383 || Sbjct: 3676101 gt 3676100
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Minus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggacca 375 |||||||| ||||| || ||||||||||| ||||| || || || ||||| || ||||| Sbjct: 62487 gactggatccatgtggacgtcatggatggacgcttcgtccccaacatcacgatcggaccc 62428 Query: 376 ttaattgttgatgctctgcgtccagtgac 404 |||| ||||| || |||||||| ||||| Sbjct: 62427 ctaatcgttgaagccctgcgtcccgtgac 62399
>emb|BX251411.1| Tropheryma whipplei TW08/27, complete genome; segment 2/3 Length = 299050 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 catgttgatgtcatggatgggcgctttgtgccaaatatcac 365 ||||||||||| |||||||||| |||||||| |||||||| Sbjct: 127044 catgttgatgtgatggatgggcattttgtgccgaatatcac 127084
>emb|BX248357.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 4/8 Length = 349535 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgccaaat 360 |||||||||||||| ||||| ||||| || | ||||||||||||| Sbjct: 294854 gactggattcatgtcgatgtgatggacggtcactttgtgccaaat 294810
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 319 tggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattgg 371 ||||| || |||||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 1713160 tggatccacgttgatgtgatggacggccgctttgtgcccaatatcaccattgg 1713108
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 325 catgttgatgtcatggatgggcgctttgtgccaaatatcac 365 ||||||||||| |||||||||| |||||||| |||||||| Sbjct: 442266 catgttgatgtgatggatgggcattttgtgccgaatatcac 442226
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 315 tgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggacc 374 |||||||||||| || ||||| |||||||| ||||| || || || ||||| |||||||| Sbjct: 1027830 tgactggattcacgtcgatgtgatggatggtcgcttcgtccctaacatcaccattggacc 1027771
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 315 tgactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggacc 374 |||||||||||| || ||||| |||||||| ||||| || || || ||||| |||||||| Sbjct: 593045 tgactggattcacgtcgatgtgatggatggtcgcttcgtccctaacatcaccattggacc 593104
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 325 catgttgatgtcatggatgggcgctttgtgccaaatatcacaattggacc 374 ||||| ||||| |||||||||| ||||| |||||| | ||||||||||| Sbjct: 1685616 catgtagatgttatggatgggcattttgttccaaatcttacaattggacc 1685665
>ref|XM_463369.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 81 cggcggccgccgccgcgtcggc 60
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 68158 cggcggccgccgccgcgtcggc 68137
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgccaaatatcac 365 |||||||| || || ||||| |||||||| ||||||||||| || ||||| Sbjct: 83575 gactggatccacgtggatgtgatggatggccgctttgtgcccaacatcac 83526
>tpg|BK000838.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M239, complete sequence Length = 1387 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 868 cggcggccgccgccgcgtcggc 889
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 25192888 cggcggccgccgccgcgtcggc 25192867
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 25541136 cggcggccgccgccgcgtcggc 25541157 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 23379443 cggcggccgccgccgcgtcggc 23379464 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cccgcgcgccgcctccctcg 148 |||||||||||||||||||| Sbjct: 40855671 cccgcgcgccgcctccctcg 40855690 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 ccgccgccgcgtcggcttctcctc 176 ||||||||||| |||||||||||| Sbjct: 27214317 ccgccgccgcggcggcttctcctc 27214294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 cgccgcctccctcggcggccgccgccgc 162 |||||||||| |||||||||||||||| Sbjct: 26385593 cgccgcctccgccggcggccgccgccgc 26385620 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 15462207 gcggccgccgccgcgtcggc 15462188
>emb|BX832443.1|CNS0A0ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 280 ggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatg 339 ||||| ||||||| ||| || ||| |||||| ||||| || ||| |||||||||||||| Sbjct: 444 ggcgagcaggtaagagcagtagagtgggcaggttgtgattgtattgatgttgatgtcatg 503 Query: 340 ga 341 || Sbjct: 504 ga 505
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 325 catgttgatgtcatggatgggc 346 |||||||||||||||||||||| Sbjct: 1555978 catgttgatgtcatggatgggc 1555999
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 68739 cggcggccgccgccgcgtcggc 68760
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 105141 cggcggccgccgccgcgtcggc 105162
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 278 ttggcgaacaggtaaaagctgt 299 |||||||||||||||||||||| Sbjct: 124250 ttggcgaacaggtaaaagctgt 124271
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 1275530 cggcggccgccgccgcgtcggc 1275551
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatggatgggcgctttgtgccaaatatcacaattggaccattaatt 381 ||||| || ||||| |||||||| | || || |||||||| || ||||||||||||||| Sbjct: 3651563 attcacgtcgatgtaatggatggacatttcgtaccaaatattacgattggaccattaatt 3651504 Query: 382 gt 383 || Sbjct: 3651503 gt 3651502
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcggc 168 |||||||||||||||||||||| Sbjct: 25511546 cggcggccgccgccgcgtcggc 25511525
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 tctgcaaactttgccaagcttggcga 284 |||||||||||||||||||| ||||| Sbjct: 2698127 tctgcaaactttgccaagctgggcga 2698102
>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1 mRNA Length = 1411 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 903 ggcggccgccgccgcgtcggc 883
>ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1316 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 912 ggcggccgccgccgcgtcggc 892
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atgtgactggattcatgttgatgtc 336 ||||| ||||||||||||||||||| Sbjct: 77576 atgtgcctggattcatgttgatgtc 77600
>ref|XM_787717.1| PREDICTED: Strongylocentrotus purpuratus similar to ribulose-5-phosphate-3-epimerase (LOC588015), mRNA Length = 693 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 ttgatgtcatggatgggcgctttgtgccaaatatcacaattggac 373 |||||||||||||||||| ||||| |||||| | ||| |||||| Sbjct: 116 ttgatgtcatggatgggcattttgttccaaatttaacatttggac 160
>gb|AC003683.2| Homo sapiens x BAC RP1-147H15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127683 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 tccattctctctgcaaactttgcca 274 |||||||||||| |||||||||||| Sbjct: 74341 tccattctctctccaaactttgcca 74365
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ggccgccgccgcgtcggcttc 171 ||||||||||||||||||||| Sbjct: 4044636 ggccgccgccgcgtcggcttc 4044656
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 cgccgccgcgtcggcttctcc 174 ||||||||||||||||||||| Sbjct: 10869675 cgccgccgcgtcggcttctcc 10869695
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 32580636 ggcggccgccgccgcgtcggc 32580616 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 25743808 cgtcggcttctcctcgtcca 25743789 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 19408517 cgtcggcttctcctcgtcca 19408536
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 cgccgccgcgtcggcttctcc 174 ||||||||||||||||||||| Sbjct: 93398 cgccgccgcgtcggcttctcc 93418
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 cgccgccgcgtcggcttctcc 174 ||||||||||||||||||||| Sbjct: 9380 cgccgccgcgtcggcttctcc 9400
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 8007 ggcggccgccgccgcgtcggc 7987
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 77609 ggcggccgccgccgcgtcggc 77589
>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full insert sequence Length = 1316 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 912 ggcggccgccgccgcgtcggc 892
>dbj|AK101995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079I19, full insert sequence Length = 1652 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 cgccgccgcgtcggcttctcc 174 ||||||||||||||||||||| Sbjct: 102 cgccgccgcgtcggcttctcc 122
>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 903 ggcggccgccgccgcgtcggc 883
>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 2596 ggcggccgccgccgcgtcggc 2576
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 394 cgtccagtgactgatcttccattggatgtgcatctgatgattgtggaacctga 446 ||||||||||| | || ||||||||||| ||| |||||||||| ||||||| Sbjct: 2993583 cgtccagtgacaaaactaccattggatgttcatttgatgattgtacaacctga 2993531 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 attcatgttgatgtcatgga 341 |||||||||||||||||||| Sbjct: 2993655 attcatgttgatgtcatgga 2993636
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ggccgccgccgcgtcggcttc 171 ||||||||||||||||||||| Sbjct: 1782917 ggccgccgccgcgtcggcttc 1782937
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 331 gatgtcatggatgggcgctttgtgccaaa 359 ||||| |||||||||| |||||||||||| Sbjct: 1027576 gatgttatggatgggcactttgtgccaaa 1027548
>gb|U97573.1|TPU97573 Treponema pallidum 60K inner-membrane protein homolog gene, partial cds, and JAG protein homolog, peptidyl-prolyl cis-trans isomerase (tpppi), gidB homolog and pentose-5-phosphate 3-epimerase homolog genes, complete cds Length = 3400 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 331 gatgtcatggatgggcgctttgtgccaaa 359 ||||| |||||||||| |||||||||||| Sbjct: 2832 gatgttatggatgggcactttgtgccaaa 2860
>gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggccgccgccgcgtcggc 168 ||||||||||||||||||||| Sbjct: 895 ggcggccgccgccgcgtcggc 875
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 316 gactggattcatgttgatgtcatggatgggcgctttgtgcc 356 |||||||||||||| ||||| ||||| |||| |||||||| Sbjct: 2436528 gactggattcatgtcgatgtgatggacgggcaatttgtgcc 2436488
>ref|XM_466984.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 768 cgtcggcttctcctcgtcca 787
>ref|XM_466064.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 189 cgtcggcttctcctcgtcca 208
>ref|NM_193870.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 71 gcggccgccgccgcgtcggc 52
>ref|NM_191913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1263 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 ccgccgccgcgtcggcttctcctc 176 ||||||||||| |||||||||||| Sbjct: 744 ccgccgccgcggcggcttctcctc 721
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 cgccgcctccctcggcggccgccgccgc 162 |||||||||| |||||||||||||||| Sbjct: 123 cgccgcctccgccggcggccgccgccgc 150
>ref|XM_603465.2| PREDICTED: Bos taurus similar to Zinc finger protein 264 (LOC525119), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ctcgctctgctccagcctcg 124 |||||||||||||||||||| Sbjct: 144 ctcgctctgctccagcctcg 125
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gcgcgccgcctccctcggcggccgccgccgcg 163 ||||| |||||||||| || |||||||||||| Sbjct: 78466 gcgcgacgcctccctccgccgccgccgccgcg 78435
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gcgcgccgcctccctcggcggccgccgccgcg 163 ||||| |||||||||| || |||||||||||| Sbjct: 40100 gcgcgacgcctccctccgccgccgccgccgcg 40069
>ref|XM_591851.2| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 1 (LOC514062), mRNA Length = 3890 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 48 ccctcggcggccgccgccgc 29
>ref|XM_882445.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 7 (LOC514062), mRNA Length = 3941 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_882432.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 6 (LOC514062), mRNA Length = 3920 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_882425.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 5 (LOC514062), mRNA Length = 3869 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_882418.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 4 (LOC514062), mRNA Length = 3124 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_869170.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 2 (LOC514062), mRNA Length = 3992 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 48 ccctcggcggccgccgccgc 29
>ref|XM_459544.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E05907g) partial mRNA Length = 762 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcga 233 |||||||||||||||||||| Sbjct: 310 gacaagttctccaagagcga 329
>gb|AE006435.1| Lactococcus lactis subsp. lactis IL1403 section 197 of 218 of the complete genome Length = 11266 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 caattggaccattaattgtt 384 |||||||||||||||||||| Sbjct: 6041 caattggaccattaattgtt 6022
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 tggattcatgttgatgtcatggatgggcgctttgtgccaaatat 362 ||||||||||||||||| ||||| || || ||||| || ||||| Sbjct: 5840859 tggattcatgttgatgtaatggacggtcgttttgtacctaatat 5840902
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cctcggcggccgccgccgcgtcgg 167 |||||||||||||||| ||||||| Sbjct: 21286 cctcggcggccgccgcggcgtcgg 21263
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cctcggcggccgccgccgcgtcgg 167 |||||||||||||||| ||||||| Sbjct: 52086 cctcggcggccgccgcggcgtcgg 52063
>gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome 3, complete sequence Length = 180558 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 atctgatgattgtggaacct 444 |||||||||||||||||||| Sbjct: 168118 atctgatgattgtggaacct 168137
>ref|NM_147151.1| Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant short, mRNA Length = 3757 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 44 ccctcggcggccgccgccgc 25
>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11, complete sequence Length = 80387 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 tcctcctcgctctgctccagcctc 123 |||||||| ||||||||||||||| Sbjct: 27182 tcctcctcactctgctccagcctc 27205
>ref|XM_782798.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 1, beta (LOC582860), mRNA Length = 2221 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 caaatatcacaattggaccattaa 379 ||||||||| |||||||||||||| Sbjct: 1506 caaatatcataattggaccattaa 1529
>gb|AE008799.1| Salmonella typhimurium LT2, section 103 of 220 of the complete genome Length = 20617 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tggcgaacaggtaaaagctg 298 |||||||||||||||||||| Sbjct: 9873 tggcgaacaggtaaaagctg 9854
>gb|BC058357.1| Mus musculus euchromatic histone lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:6822432), partial cds Length = 3905 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 49 ccctcggcggccgccgccgc 30
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gacaagttctccaagagcga 233 |||||||||||||||||||| Sbjct: 435292 gacaagttctccaagagcga 435311
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cgcgcgccgcctccctcggc 150 |||||||||||||||||||| Sbjct: 270097 cgcgcgccgcctccctcggc 270078
>emb|AL627273.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 9/20 Length = 250050 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tggcgaacaggtaaaagctg 298 |||||||||||||||||||| Sbjct: 236626 tggcgaacaggtaaaagctg 236607
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 74912 gcggccgccgccgcgtcggc 74893
>emb|AJ315532.1|HSA315532 Homo sapiens mRNA for NG36/G9a protein Length = 3633 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 44 ccctcggcggccgccgccgc 25
>emb|BX001068.7| Mouse DNA sequence from clone RP23-54E4 on chromosome 13 Contains the gene for a novel SCAN domain containing C2H2 type zinc finger protein, two novel genes (933017L02Rik, 492150E05Rik), the Skz1 gene for SCAN-KRAB-zinc finger gene 1, a ribosomal protein L29 (Rpl29) pseudogene, the Zfp96 gene for Zinc finger protein 96, the gene for olfactory receptor MOR256-16, the gene for a novel protein similar to plasma glutathione peroxidase Gpx3, the (pseudo)gene for a novel protein similar to ribosomal protein L29 (Rpl29) and the Gpx5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), complete sequence Length = 175880 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 aaccatccatctgcaccgaa 532 |||||||||||||||||||| Sbjct: 15178 aaccatccatctgcaccgaa 15159
>gb|AF401518.1| Lactococcus lactis X-prolyl dipeptidyl aminopeptidase (pepX) gene, complete cds Length = 2292 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 caattggaccattaattgtt 384 |||||||||||||||||||| Sbjct: 1852 caattggaccattaattgtt 1833
>dbj|AK056936.1| Homo sapiens cDNA FLJ32374 fis, clone SALGL1000047, highly similar to NG36 Length = 1454 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 54 ccctcggcggccgccgccgc 35
>gb|AC091882.3| Homo sapiens chromosome 5 clone RP11-101A19, complete sequence Length = 126486 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 aattccagattttatcaagg 472 |||||||||||||||||||| Sbjct: 93894 aattccagattttatcaagg 93875
>gb|BC018718.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone MGC:31802 IMAGE:4123580), complete cds Length = 3963 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 32 ccctcggcggccgccgccgc 13
>gb|BC009351.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:4138717), partial cds Length = 3972 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 41 ccctcggcggccgccgccgc 22
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcg 166 |||||||||||||||||||| Sbjct: 1403704 cggcggccgccgccgcgtcg 1403685
>ref|NM_025256.4| Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a-SPI, mRNA Length = 3892 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 54 ccctcggcggccgccgccgc 35
>ref|NM_006709.2| Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a, mRNA Length = 3994 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 54 ccctcggcggccgccgccgc 35
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcg 166 |||||||||||||||||||| Sbjct: 3029566 cggcggccgccgccgcgtcg 3029585
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gcgcgccgcctccctcggcggccgccgccgcg 163 ||||| |||||||||| || |||||||||||| Sbjct: 2593580 gcgcgacgcctccctccgccgccgccgccgcg 2593549
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cccgcgcgccgcctccctcg 148 |||||||||||||||||||| Sbjct: 158317 cccgcgcgccgcctccctcg 158336
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cccgcgcgccgcctccctcg 148 |||||||||||||||||||| Sbjct: 67777 cccgcgcgccgcctccctcg 67796
>gb|AC112482.4| Homo sapiens 3 BAC RP11-305F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182916 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cattgtgtccccttccattc 256 |||||||||||||||||||| Sbjct: 129061 cattgtgtccccttccattc 129080
>gb|AC073043.5| Homo sapiens BAC clone RP11-15N15 from 2, complete sequence Length = 165854 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tccagattttatcaaggcag 475 |||||||||||||||||||| Sbjct: 34239 tccagattttatcaaggcag 34220
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tggcgaacaggtaaaagctg 298 |||||||||||||||||||| Sbjct: 709881 tggcgaacaggtaaaagctg 709900
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 26044 cgtcggcttctcctcgtcca 26063
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 ccgccgccgcgtcggcttctcctc 176 ||||||||||| |||||||||||| Sbjct: 121995 ccgccgccgcggcggcttctcctc 121972
>gb|AF255725.1|AF255725 Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, partial cds Length = 162 Score = 40.1 bits (20), Expect = 7.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 427 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctga 482 ||||||||||| ||||| || ||||| | |||||||| ||||| ||||| ||||| Sbjct: 1 ctgatgattgtagaaccagaccagcgggtgccagatttcatcaaagcaggagctga 56
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 tggattcatgttgatgtcatggatgggcgctttgtgccaaatat 362 ||||||||||||||||| ||||| || || ||||| || ||||| Sbjct: 905393 tggattcatgttgatgtaatggacggtcgttttgtacctaatat 905436
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 cgccgcctccctcggcggccgccgccgc 162 |||||||||| |||||||||||||||| Sbjct: 59458 cgccgcctccgccggcggccgccgccgc 59485
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 19716 gcggccgccgccgcgtcggc 19697
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 139748 gcggccgccgccgcgtcggc 139729
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 94008 cgtcggcttctcctcgtcca 94027
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 146484 cgtcggcttctcctcgtcca 146465
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cctcggcggccgccgccgcgtcgg 167 |||||||||||||||| ||||||| Sbjct: 7010 cctcggcggccgccgcggcgtcgg 6987
>dbj|AK121501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B16, full insert sequence Length = 1943 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 262 gcggccgccgccgcgtcggc 243
>dbj|AK120844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M14, full insert sequence Length = 2489 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcg 166 |||||||||||||||||||| Sbjct: 1654 cggcggccgccgccgcgtcg 1635
>dbj|AK120813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014M03, full insert sequence Length = 2643 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcg 166 |||||||||||||||||||| Sbjct: 1723 cggcggccgccgccgcgtcg 1704
>dbj|AK107491.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D02, full insert sequence Length = 2127 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcggcttctcctcgtcca 181 |||||||||||||||||||| Sbjct: 768 cgtcggcttctcctcgtcca 787
>dbj|AK073323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028O20, full insert sequence Length = 1803 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 141 gcggccgccgccgcgtcggc 122
>dbj|AK063586.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A06, full insert sequence Length = 1392 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cccgcgcgccgcctccctcg 148 |||||||||||||||||||| Sbjct: 866 cccgcgcgccgcctccctcg 847
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tggcgaacaggtaaaagctg 298 |||||||||||||||||||| Sbjct: 717088 tggcgaacaggtaaaagctg 717107
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tggcgaacaggtaaaagctg 298 |||||||||||||||||||| Sbjct: 2345089 tggcgaacaggtaaaagctg 2345070
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcggccgccgccgcgtcggc 168 |||||||||||||||||||| Sbjct: 994486 gcggccgccgccgcgtcggc 994467
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cggcggccgccgccgcgtcg 166 |||||||||||||||||||| Sbjct: 3029511 cggcggccgccgccgcgtcg 3029530
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggccgccgccgcgtcg 166 |||||||||||||||||||| Sbjct: 125277 cggcggccgccgccgcgtcg 125258
>dbj|AB077209.1| Mus musculus mRNA for G9a short, complete cds Length = 3757 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccctcggcggccgccgccgc 162 |||||||||||||||||||| Sbjct: 44 ccctcggcggccgccgccgc 25
>gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome 5, complete sequence Length = 213322 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtcgccctcctcctcgctctgctc 116 |||||||||||| ||||||||||| Sbjct: 77122 gtcgccctcctcgtcgctctgctc 77099 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,804,373 Number of Sequences: 3902068 Number of extensions: 4804373 Number of successful extensions: 105279 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102908 Number of HSP's gapped (non-prelim): 2356 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
