ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdj01 |
|---|---|
| Clone Library Name | barley_pub |
>ETFA_HUMAN (P13804) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 98.2 bits (243), Expect = 9e-21 Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 27/166 (16%) Frame = +2 Query: 2 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 100 +L R STL+IAEH + P +L+ + + Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIA 74 Query: 101 EVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 280 +VLVA DV+ L E L+ Q++ Y+H+ A +++FGKNLLPR AA L+V+P++D Sbjct: 75 KVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISD 134 Query: 281 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATES 418 + AI P FVR IYAGNALCTV+ E + S+ TSF A S Sbjct: 135 IIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFDAAATS 179
>ETFA_PONPY (Q5RC31) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 97.8 bits (242), Expect = 1e-20 Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 27/166 (16%) Frame = +2 Query: 2 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 100 +L R STL+IAEH + P +L+ + + Sbjct: 15 SLLRFQSTLVIAEHADDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIA 74 Query: 101 EVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 280 +VLVA DV+ L E L+ Q++ Y+H+ A +++FGKNLLPR AA L+V+P++D Sbjct: 75 KVLVAQHDVYRGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISD 134 Query: 281 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATES 418 + AI P FVR IYAGNALCTV+ E + S+ TSF A S Sbjct: 135 IIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATS 179
>ETFA_MACFA (Q8HXY0) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 97.4 bits (241), Expect = 2e-20 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 27/163 (16%) Frame = +2 Query: 11 RLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VNEVL 109 R STL+IAEH + P +L+ + + +VL Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVL 77 Query: 110 VADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTA 289 VA D + LAE L+ Q++ Y+H+ A +++FGKNLLPR AA L+V+P++D+ A Sbjct: 78 VAQHDAYRGLLAEDLTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIA 137 Query: 290 ISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATES 418 I P FVR IYAGNALCTV+ E + S+ TSF A S Sbjct: 138 IKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATS 179
>ETFA_MOUSE (Q99LC5) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 93.6 bits (231), Expect = 2e-19 Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 27/166 (16%) Frame = +2 Query: 2 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 100 +L R STL+IAEH + P +L+ + V Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKVVQDLCKVAGVA 74 Query: 101 EVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 280 +VLVA D + L E L+ Q++ Y+H+ A +++FGKNLLPR AA L+V+PV+D Sbjct: 75 KVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLNVAPVSD 134 Query: 281 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATES 418 + I P FVR IYAGNALCTV+ E + S+ TSF A S Sbjct: 135 IIEIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATS 179
>ETFA_RAT (P13803) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 92.8 bits (229), Expect = 4e-19 Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 27/166 (16%) Frame = +2 Query: 2 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 100 +L R STL+IAEH + P +L+ + V Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKVVQDLCKVAGVA 74 Query: 101 EVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 280 +VLVA D + L E L+ Q++ Y+H++A +++FGKNLLPR AA L+V+PV+D Sbjct: 75 KVLVAQHDAYKGLLPEELTPLILETQKQFSYTHIVAGASAFGKNLLPRVAAKLNVAPVSD 134 Query: 281 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATES 418 + I P FVR IYA NALCTV+ E + S+ TSF A S Sbjct: 135 IIEIKSPDTFVRTIYAANALCTVK-CDEKVKVFSVRGTSFEAAAAS 179
>ETFA_CRYNE (Q8J0W1) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 346 Score = 89.4 bits (220), Expect = 4e-18 Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 31/164 (18%) Frame = +2 Query: 11 RLVSTLIIAEHEGGLVKPSSLSA---------SSHPLV--------------------NE 103 RLVS+L+ EH+ G + +SLSA +H L+ ++ Sbjct: 23 RLVSSLVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTKSEIENVLDRTKEIKDLSK 82 Query: 104 VLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 283 + +A SD ++H LAEP A LL + SH+ A+ T+ GKN+ PR A LLD S + D+ Sbjct: 83 IYLATSDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSLIADI 142 Query: 284 TAI-SEPWVFVRPIYAGNALCTVRYT-GESPCMMSIXSTSFSLA 409 A+ S F RPIYAGNA+ T++ + +S ++++ ST+F A Sbjct: 143 IALESSGDTFTRPIYAGNAVLTIKSSPKDSVKVVTVRSTAFDKA 186
>ETFA_CRYGA (Q5Y223) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 346 Score = 82.8 bits (203), Expect = 4e-16 Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 31/164 (18%) Frame = +2 Query: 11 RLVSTLIIAEHEGGLVKPSSLSA---------SSHPLV--------------------NE 103 RLVS+L+ EH+ G + +SLSA +H L+ ++ Sbjct: 23 RLVSSLVFLEHKAGKLSEASLSAVTAAKTLGNDTHGLLVGTKSEIENALDRAKEIKGLSK 82 Query: 104 VLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 283 + +A SD ++H LAE A LL + SH+ A+ T+ GKN+ PR A LLD S + D+ Sbjct: 83 IYLARSDSYSHSLAEALASLLASIVSAKDVSHLFAAHTAVGKNVFPRLAGLLDSSLIADI 142 Query: 284 TAI-SEPWVFVRPIYAGNALCTVRYT-GESPCMMSIXSTSFSLA 409 A+ S F RPIYAGNA+ T++ + +S ++++ ST+F A Sbjct: 143 IALESSGDTFTRPIYAGNAVLTIKSSPKDSVKIVTVRSTAFDKA 186
>ETFA_CRYNV (Q8J112) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 346 Score = 82.0 bits (201), Expect = 7e-16 Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 31/164 (18%) Frame = +2 Query: 11 RLVSTLIIAEHEGGLVKPSSLSA---------SSHPLV--------------------NE 103 RL S+L++ EH+ G + +SLSA +H ++ ++ Sbjct: 23 RLASSLVLLEHKAGRLNDASLSAVTAAKATGNDTHGILVGSMAEVEGVLKEAKKIKDLSK 82 Query: 104 VLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 283 + +A SD ++H LAE A LL + SHV A+ T+ GKN+ PR A +LD S V D+ Sbjct: 83 IYLATSDAYSHSLAEALAPLLASIVPTKDVSHVFAAHTAVGKNVFPRLAGMLDSSLVADI 142 Query: 284 TAIS-EPWVFVRPIYAGNALCTVRYT-GESPCMMSIXSTSFSLA 409 A+ F RPIYAGNA+ TV+ + +S ++++ ST+F A Sbjct: 143 IALDPSRGTFTRPIYAGNAVLTVKSSPKDSVKIVTVRSTAFDKA 186
>ETFA_PARDE (P38974) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 307 Score = 81.6 bits (200), Expect = 9e-16 Identities = 53/134 (39%), Positives = 79/134 (58%) Frame = +2 Query: 47 GGLVKPSSLSASSHPLVNEVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFG 226 G K ++ A+ V +VLVA+ ++ H LAEP A L+ V YSH+ A +T+ Sbjct: 37 GASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALI--VGLAGDYSHIAAPATTDA 94 Query: 227 KNLLPRAAALLDVSPVTDVTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSL 406 KN++PR AALLDV ++DV+AI + F RPIYAGNA+ V+ + ++ + +I + SF Sbjct: 95 KNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVK-SKDAKKVFTIRTASFDA 153 Query: 407 ATESMSXTXXAPIT 448 A E AP+T Sbjct: 154 AGEG----GTAPVT 163
>ETFA_BRAJA (P53573) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 314 Score = 78.2 bits (191), Expect = 1e-14 Identities = 44/110 (40%), Positives = 72/110 (65%) Frame = +2 Query: 95 VNEVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPV 274 V +VL+AD ++AH LAEP A L+ V Y ++A +TS KN++PR AALLDV V Sbjct: 54 VKKVLLADGALYAHDLAEPLAALI--VSLAPSYDAIVAPATSRFKNVMPRVAALLDVMQV 111 Query: 275 TDVTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATESMS 424 +++ + P + RPIYAGNA+ TV+ + ++ ++++ +++F+ A E S Sbjct: 112 SEIIKVVAPDTYERPIYAGNAIQTVK-SKDAKKVITVRTSTFAAAGEGGS 160
>ETFA_YEAST (Q12480) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 344 Score = 73.6 bits (179), Expect = 2e-13 Identities = 39/94 (41%), Positives = 54/94 (57%) Frame = +2 Query: 140 LAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTAISEPWVFVRP 319 L E LL + + YSH + S++S GK++LPR ALLDV PV +VT I +P F+RP Sbjct: 95 LPEQLTPLLVKLLKGGDYSHFVVSNSSVGKSVLPRVGALLDVQPVCEVTVIKDPKTFIRP 154 Query: 320 IYAGNALCTVRYTGESPCMMSIXSTSFSLATESM 421 IYAGN + T+ E ++ S +A SM Sbjct: 155 IYAGNIISTIECQAEKKLLIIRASAFPPIAEGSM 188
>ETFA_CAEEL (Q93615) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 332 Score = 71.6 bits (174), Expect = 9e-13 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 27/165 (16%) Frame = +2 Query: 11 RLVSTLIIAEHEGGLVKPSSLSA--SSHPLVNE-------------------------VL 109 RL STL++AEH+ + P +L+A ++ L NE VL Sbjct: 19 RLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVNGVKRVL 78 Query: 110 VADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTA 289 VA + + L E A ++ Q++ ++ + A S++FG+ ++PR AA LDVS ++DVT Sbjct: 79 VAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSSISDVTE 138 Query: 290 ISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATESMS 424 + F R +YAGNA+ V+ T +++ TSF A E S Sbjct: 139 VHSADSFTRTLYAGNAVKKVKSTAPIK-LLTFRGTSFEPAKEGGS 182
>ETFA_SCHPO (P78790) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 341 Score = 63.9 bits (154), Expect = 2e-10 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 28/165 (16%) Frame = +2 Query: 8 RRLVSTLIIAEHEGGLVKPSSLSA----------------------------SSHPLVNE 103 R S L + EH+GG + P+SLSA S + + Sbjct: 25 RHWFSVLTLLEHQGGNLSPASLSAVEAAKRTGGDVFGFVIGKDSSQISQKVAKSVNDLKK 84 Query: 104 VLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 283 V+ ++ + H + + A +L +K SHV ++ ++ GK ++PR AA+ DV ++D+ Sbjct: 85 VIYVENPSYEHNIPDQIANVLFENVKKNEISHVFSAHSTVGKGVMPRLAAMFDVMQISDI 144 Query: 284 TAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIXSTSFSLATES 418 + FVRP YAGN TV T + ++++ +++F A S Sbjct: 145 IGVVSADTFVRPTYAGNVNVTVS-TKDPIKIVTVRASAFDAAPSS 188
>ETFA_BACSU (P94551) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 325 Score = 44.3 bits (103), Expect = 2e-04 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Frame = +2 Query: 86 HPLVNEVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLD- 262 H ++VL A+ A+ +++++R V ++ VI T+ GK+L P+ AA L Sbjct: 54 HYGADKVLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAMGKDLSPKLAARLQT 113 Query: 263 --VSPVTDVTAISEPWVFVRPIYAGNA 337 +S DV+ VF RPIY+G A Sbjct: 114 GLISDAIDVSVTGGNVVFTRPIYSGKA 140
>ETFA_CLOAB (P52039) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 336 Score = 40.4 bits (93), Expect = 0.002 Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Frame = +2 Query: 98 NEVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVT 277 ++VL AD+++ AH + +A+++ + + + +T G++L PR AA L Sbjct: 64 DKVLAADNELLAHFSTDGYAKVICDLVNERKPEILFIGATFIGRDLGPRIAARLSTGLTA 123 Query: 278 DVTAI-----SEPWVFVRPIYAGNALCTVRYTGESPCMMSI 385 D T++ + + RP + GN + T+ + P M ++ Sbjct: 124 DCTSLDIDVENRDLLATRPAFGGNLIATIVCSDHRPQMATV 164
>FIXB_CLOSA (P53578) Protein fixB| Length = 334 Score = 39.7 bits (91), Expect = 0.004 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Frame = +2 Query: 98 NEVLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVT 277 +EVLVAD+ H + + +++ + + + +T G++L PR AA L+ Sbjct: 63 DEVLVADNKDLQHYTTDAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTGLTA 122 Query: 278 DVTAI-----SEPWVFVRPIYAGNALCTVRYTGESPCMMSI 385 D T+I + + RP + GN + T+ P M ++ Sbjct: 123 DCTSIDVEVENGDLLATRPAFGGNLMATIACPEHRPQMATV 163
>ETFA_CLOTS (P71153) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 330 Score = 35.8 bits (81), Expect = 0.055 Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Frame = +2 Query: 104 VLVADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 283 V V D+ + ++ E +A+ + + ++ ++ +T G++L PR A+ L D Sbjct: 64 VYVVDNPLLSNYTTEGYAKAISELAKEYKPEVILYGATFIGRDLAPRIASRLMTGLTADC 123 Query: 284 TA--ISEPWVFV--RPIYAGNALCTVRYTGESPCMMSI 385 T I E + + RP + GN + T++ + P M ++ Sbjct: 124 TGLDIDENGLLLQTRPAFGGNLMATIKCPDKRPQMSTV 161
>YGCQ_ECOLI (Q46907) Putative electron transfer flavoprotein subunit ygcQ| Length = 286 Score = 32.7 bits (73), Expect = 0.46 Identities = 24/82 (29%), Positives = 37/82 (45%) Frame = +2 Query: 140 LAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTAISEPWVFVRP 319 +AE + L Q+ V+ +FG L R A L + + VT++ P V VR Sbjct: 40 VAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRK 99 Query: 320 IYAGNALCTVRYTGESPCMMSI 385 + GNAL T + P +S+ Sbjct: 100 SHWGNALTATLQTEKRPLCLSL 121
>C14AA_BACTS (Q45710) Pesticidal crystal protein cry14Aa (Insecticidal| delta-endotoxin CryXIVA(a)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1186 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = -3 Query: 252 AAARGSKFFPNDVDEAIT*EYPXFCCTXRSSSAQG-SAKGCANTSESATRTSLTNGWLDA 76 AA + SK+ + I P +C T S++ Q S AN+ +++ S TN ++A Sbjct: 429 AATQNSKYLDGETINGIGASLPGYCTTGCSATEQPFSCTSTANSYKASCNPSDTNQKINA 488 Query: 75 LREDGFTSPPSCSAMISVLTSL 10 L T+ + + VL SL Sbjct: 489 LYAFTQTNVKGSTGKLGVLASL 510
>VG22_ICHV1 (Q00105) Hypothetical gene 22 protein| Length = 1403 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = -1 Query: 323 KLASQRPMVQIWQ*RP*QGRHLEEPRRVEANSSRTTSTRLSHESIHXSAARSG-----AA 159 ++ S+RP+ + + +G H+ EP+ + + R SH+ +H S R AA Sbjct: 1237 RVPSRRPVTLLER----RGAHVAEPKPTPRVRGKRPAARHSHKRVHLSITRETLRLALAA 1292 Query: 158 RPKARLKDAQTRLNPQQE 105 P+ ++ RLN E Sbjct: 1293 GPEMSAEEIFQRLNTDME 1310
>FIXB_RHIME (P09819) Protein fixB| Length = 353 Score = 30.0 bits (66), Expect = 3.0 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%) Frame = +2 Query: 110 VADSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTA 289 + +S + AH EP+ + L + ++ +T+ G++L A L D T Sbjct: 78 LVESPLLAHYRNEPFTKALTDLVLANKPEILLLGATTLGRDLAGSVATTLKTGLTADCTE 137 Query: 290 IS----EPWVFVRPIYAGNALCTV 349 ++ RP + G+ LCT+ Sbjct: 138 LNVDSDGSLAATRPTFGGSLLCTI 161
>YKFA_ECOLI (P75678) Hypothetical protein ykfA| Length = 287 Score = 29.6 bits (65), Expect = 3.9 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +2 Query: 161 LLRXVQQKXGYSHVIA--SSTSFGKNLLPRAAALLDVSPVTDVTAIS-EPWVF 310 LL+ + Q Y VI T GK+ L A D+SPV+DV A + EP F Sbjct: 25 LLQQINQLTNYEPVIGIMGKTGVGKSSLCNALFAGDISPVSDVAACTREPLRF 77
>MUC15_HUMAN (Q8N387) Mucin-15 precursor| Length = 334 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 11/50 (22%) Frame = +2 Query: 35 AEHEGGLVKPSSLSASSHPLVNEVL--------VADSD---VFAHPLAEP 151 AEH G +KP+S ++S PL++ + +AD D + AHP A P Sbjct: 93 AEHSLGSLKPTSTISTSPPLIHSFVSKVPWNAPIADEDLLPISAHPNATP 142
>YR7D_ECOLI (P21318) Hypothetical 11.0 kDa protein (ORFD) (Retron EC67)| Length = 100 Score = 29.3 bits (64), Expect = 5.1 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2 Query: 245 AAALLDVSPVTDVTAISEPWVF--VRPIYAGNAL 340 AA + V PV DV A+SE WV +RP+ AL Sbjct: 58 AAVISHVLPVNDVMAVSEQWVMLSIRPLTPLEAL 91
>ACEA_PICPA (Q9C124) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)| (ICL) Length = 550 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = -1 Query: 272 QGRHLEEPRRVEANSSRTTSTRLSHESIHXSAARSGAARPKARLKD 135 QG++ E ++EA+ S+ +L HE++ + +S + + K KD Sbjct: 292 QGKYGAELSQLEADWSKKAGLKLYHEAVFEAIDKSSSVKDKQAAKD 337
>E1BL_ADE12 (P04491) E1B protein, large T-antigen| Length = 482 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 Query: 274 HGRHCHI*TMGLCEANLCWKCTLHCTIYRGV 366 H RHC +C+ N+ +CT+H + RG+ Sbjct: 362 HSRHC----WPVCDHNMFMRCTIHLGLRRGM 388
>GLR21_ARATH (O04660) Glutamate receptor 2.1 precursor (Ligand-gated ion channel| 2.1) (AtGLR3) Length = 901 Score = 28.5 bits (62), Expect = 8.7 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +2 Query: 230 NLLPRAAALLDVSPVTDVTAISEPWV-----FVRPIYAGNALCTVRYTGESPCMMSIXST 394 +++ AAA LD+ +V AI PW F+ + + + V Y+ SP + SI S Sbjct: 80 DVVTAAAAALDLITNKEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQ 139 Query: 395 SFSLAT 412 F AT Sbjct: 140 YFFRAT 145
>YKC7_CAEEL (P41998) Hypothetical protein B0280.7| Length = 344 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/42 (26%), Positives = 20/42 (47%) Frame = +2 Query: 116 DSDVFAHPLAEPWAELLRXVQQKXGYSHVIASSTSFGKNLLP 241 D+ +AH A W ++ + + Y H++ S G +LP Sbjct: 238 DNKTYAH--ASQWTDVKKGANMRCNYRHIVKESCVLGTEILP 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,341,739 Number of Sequences: 219361 Number of extensions: 1121285 Number of successful extensions: 3168 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3158 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
