>GAG_SFV1 (Q00071) Gag polyprotein (Core polyprotein)|
          Length = 647

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 8   QNASVGERSALQGSNRESGGRRTGSENVGLSNEN 109
           Q+ + GE+S   G+ RE GGR   + N   + EN
Sbjct: 577 QSEARGEQSRTSGAGREQGGRGNQNRNQRSAGEN 610


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,175,615
Number of Sequences: 219361
Number of extensions: 188191
Number of successful extensions: 517
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 80,573,946
effective HSP length: 22
effective length of database: 75,748,004
effective search space used: 1817952096
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)