Clone Name	basdi22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	242	2e-61
2	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	242	2e-61
3	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	242	2e-61
4	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	242	2e-61
5	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	242	2e-61
6	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	242	2e-61
7	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	242	2e-61
8	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	242	2e-61
9	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	242	2e-61
10	gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str...	242	2e-61
11	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	242	2e-61
12	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	242	2e-61
13	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	242	2e-61
14	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	242	2e-61
15	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	242	2e-61
16	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	242	2e-61
17	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	242	2e-61
18	dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
19	dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
20	dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
21	dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
22	dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
23	dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
24	dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
25	dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
26	dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
27	dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
28	dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	242	2e-61
29	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	242	2e-61
30	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	242	2e-61
31	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	242	2e-61
32	gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA...	234	6e-59
33	gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom...	234	6e-59
34	gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA	234	6e-59
35	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	234	6e-59
36	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	234	6e-59
37	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	234	6e-59
38	gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene,...	234	6e-59
39	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	234	6e-59
40	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	234	6e-59
41	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	234	6e-59
42	dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clon...	234	6e-59
43	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	234	6e-59
44	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	234	6e-59
45	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	232	2e-58
46	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	232	2e-58
47	gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence	202	2e-49
48	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	202	2e-49
49	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	202	2e-49
50	emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of p...	200	8e-49
51	dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clon...	196	1e-47
52	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	192	2e-46
53	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	184	5e-44
54	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	178	3e-42
55	gb|DQ481232.1| Populus suaveolens unknown gene	176	1e-41
56	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	176	1e-41
57	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	168	3e-39
58	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	168	3e-39
59	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	168	3e-39
60	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	168	3e-39
61	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	168	3e-39
62	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	168	3e-39
63	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	168	3e-39
64	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	168	3e-39
65	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	168	3e-39
66	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	168	3e-39
67	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	168	3e-39
68	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	168	3e-39
69	gb|AY582139.1| Panax ginseng chloroplast, complete genome	168	3e-39
70	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	168	3e-39
71	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	168	3e-39
72	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	168	3e-39
73	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	168	3e-39
74	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	168	3e-39
75	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	168	3e-39
76	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	168	3e-39
77	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	168	3e-39
78	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	168	3e-39
79	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	168	3e-39
80	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	161	7e-37
81	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	161	7e-37
82	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	161	7e-37
83	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	161	7e-37
84	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	161	7e-37
85	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	157	1e-35
86	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	153	2e-34
87	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	153	2e-34
88	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	153	2e-34
89	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	153	2e-34
90	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	153	2e-34
91	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	153	2e-34
92	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	153	2e-34
93	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	153	2e-34
94	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	153	2e-34
95	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	153	2e-34
96	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	153	2e-34
97	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	145	4e-32
98	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	145	4e-32
99	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	145	4e-32
100	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	145	4e-32
101	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	141	6e-31
102	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	141	6e-31
103	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	139	2e-30
104	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	137	1e-29
105	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	137	1e-29
106	gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial ...	131	6e-28
107	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	127	9e-27
108	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	127	9e-27
109	emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa...	127	9e-27
110	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	125	4e-26
111	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	123	1e-25
112	gb|L42986.1|RTCCPRGOLA Carteria lunzensis	123	1e-25
113	gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast lar...	123	1e-25
114	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	123	1e-25
115	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	123	1e-25
116	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	123	1e-25
117	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	123	1e-25
118	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	123	1e-25
119	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	123	1e-25
120	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	123	1e-25
121	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	123	1e-25
122	emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL g...	123	1e-25
123	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	123	1e-25
124	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	123	1e-25
125	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	123	1e-25
126	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	117	9e-24
127	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	117	9e-24
128	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	117	9e-24
129	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	117	9e-24
130	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	117	9e-24
131	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	117	9e-24
132	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	117	9e-24
133	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	117	9e-24
134	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	117	9e-24
135	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	117	9e-24
136	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	117	9e-24
137	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	117	9e-24
138	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	117	9e-24
139	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	117	9e-24
140	gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large...	115	4e-23
141	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	115	4e-23
142	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	115	4e-23
143	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	115	4e-23
144	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	115	4e-23
145	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	115	4e-23
146	gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit riboso...	115	4e-23
147	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	115	4e-23
148	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	115	4e-23
149	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	115	4e-23
150	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	115	4e-23
151	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	115	4e-23
152	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	115	4e-23
153	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	115	4e-23
154	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	115	4e-23
155	emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	115	4e-23
156	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	115	4e-23
157	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	113	1e-22
158	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	111	6e-22
159	gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal ...	111	6e-22
160	gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rr...	111	6e-22
161	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	111	6e-22
162	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	109	2e-21
163	gb|L43540.1|DUNCPRRNL Dunaliella parva	109	2e-21
164	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	109	2e-21
165	gb|L43500.1|RTCCPRRNL Carteria olivieri	109	2e-21
166	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	109	2e-21
167	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	109	2e-21
168	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	109	2e-21
169	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	109	2e-21
170	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	109	2e-21
171	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	109	2e-21
172	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	109	2e-21
173	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	109	2e-21
174	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	109	2e-21
175	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	109	2e-21
176	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	109	2e-21
177	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	109	2e-21
178	emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ...	109	2e-21
179	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	107	9e-21
180	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	107	9e-21
181	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	105	3e-20
182	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	105	3e-20
183	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	105	3e-20
184	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	105	3e-20
185	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	105	3e-20
186	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	105	3e-20
187	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	105	3e-20
188	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	105	3e-20
189	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	105	3e-20
190	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	105	3e-20
191	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	105	3e-20
192	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	105	3e-20
193	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	105	3e-20
194	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	105	3e-20
195	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	105	3e-20
196	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	105	3e-20
197	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	105	3e-20
198	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	105	3e-20
199	gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloropla...	105	3e-20
200	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	105	3e-20
201	gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal...	105	3e-20
202	gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...	105	3e-20
203	gb|AF041468.1| Guillardia theta complete plastid genome	105	3e-20
204	emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmati...	105	3e-20
205	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	105	3e-20
206	gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA	105	3e-20
207	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	105	3e-20
208	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	103	1e-19
209	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	101	5e-19
210	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	101	5e-19
211	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	101	5e-19
212	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	101	5e-19
213	gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-...	101	5e-19
214	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	101	5e-19
215	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	101	5e-19
216	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	101	5e-19
217	gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA...	101	5e-19
218	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	101	5e-19
219	emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL g...	101	5e-19
220	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	100	2e-18
221	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	100	2e-18
222	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	100	2e-18
223	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	100	2e-18
224	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	100	2e-18
225	gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large s...	100	2e-18
226	gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal...	100	2e-18
227	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	100	2e-18
228	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	100	2e-18
229	emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL ge...	100	2e-18
230	emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene...	100	2e-18
231	emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Il...	100	2e-18
232	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	98	8e-18
233	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	98	8e-18
234	emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene ...	98	8e-18
235	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	98	8e-18
236	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	96	3e-17
237	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	96	3e-17
238	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	96	3e-17
239	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	96	3e-17
240	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	96	3e-17
241	gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-s...	96	3e-17
242	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	96	3e-17
243	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	96	3e-17
244	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	96	3e-17
245	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	96	3e-17
246	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	96	3e-17
247	gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) m...	96	3e-17
248	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	96	3e-17
249	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	94	1e-16
250	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	94	1e-16
251	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	94	1e-16
252	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	94	1e-16
253	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	94	1e-16
254	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	92	5e-16
255	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	92	5e-16
256	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	92	5e-16
257	gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribo...	90	2e-15
258	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	88	8e-15
259	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	88	8e-15
260	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	88	8e-15
261	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	86	3e-14
262	gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA g...	86	3e-14
263	gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene,...	86	3e-14
264	gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA...	86	3e-14
265	gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-sub...	86	3e-14
266	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	86	3e-14
267	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	84	1e-13
268	gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S riboso...	84	1e-13
269	gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S riboso...	84	1e-13
270	gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosoma...	84	1e-13
271	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	84	1e-13
272	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	84	1e-13
273	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	84	1e-13
274	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	84	1e-13
275	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	84	1e-13
276	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	84	1e-13
277	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	84	1e-13
278	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	84	1e-13
279	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	84	1e-13
280	gb|DQ398104.1| Helicosporidium sp. ex Simulium jonesii plastid, ...	82	5e-13
281	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	82	5e-13
282	emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome	82	5e-13
283	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	82	5e-13
284	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	82	5e-13
285	emb|X13310.1|CHEG23S Euglena gracilis chloroplast 23S ribosomal ...	82	5e-13
286	emb|X12890.1|CHEGRRNC Euglena gracilis rrnC operon containing 16...	82	5e-13
287	dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clon...	80	2e-12
288	emb|X68896.1|CHCIRRNX4 Chloroplast Chlamydomonas indica rrnL gen...	80	2e-12
289	emb|X68915.1|CHCMRRNX3 Chloroplast C.moewusii rrnL gene, exon 3	80	2e-12
290	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	80	2e-12
291	emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g...	78	8e-12
292	emb|AJ294725.1|ALO294725 Astasia longa complete chloroplast genome	78	8e-12
293	dbj|AB181958.1| Heterosigma akashiwo chloroplast genes for 16S r...	78	8e-12
294	dbj|AB181955.1| Heterosigma akashiwo chloroplast genes for 16S r...	78	8e-12
295	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	76	3e-11
296	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	76	3e-11
297	gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosoma...	76	3e-11
298	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	76	3e-11
299	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	76	3e-11
300	dbj|AB181957.1| Heterosigma akashiwo chloroplast genes for 16S r...	76	3e-11
301	dbj|AB181956.1| Heterosigma akashiwo chloroplast genes for 16S r...	76	3e-11
302	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	74	1e-10
303	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	74	1e-10
304	dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D...	70	2e-09
305	dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D...	70	2e-09
306	gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosoma...	68	8e-09
307	gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, pa...	68	8e-09
308	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	68	8e-09
309	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	68	8e-09
310	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	68	8e-09
311	dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic D...	68	8e-09
312	gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map ...	66	3e-08
313	gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma...	66	3e-08
314	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	66	3e-08
315	dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D...	66	3e-08
316	dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D...	66	3e-08
317	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	64	1e-07
318	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	62	5e-07
319	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	62	5e-07
320	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	56	3e-05
321	gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, ...	54	1e-04
322	gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-su...	54	1e-04
323	gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit riboso...	54	1e-04
324	gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal...	50	0.002
325	gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RN...	48	0.007
326	emb|AJ879820.1| Uncultured organism 23S rRNA gene, clone LP4-62	48	0.007
327	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	46	0.028
328	gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit riboso...	46	0.028
329	gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, p...	44	0.11
330	gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, p...	44	0.11
331	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	44	0.11
332	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	44	0.11
333	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	44	0.11
334	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	44	0.11
335	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	44	0.11
336	emb|AJ440238.1|ACT440238 Conexibacter woesei partial 23S rRNA ge...	40	1.7
337	gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene...	40	1.7
338	gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome...	38	6.8
339	gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1...	38	6.8
340	emb|X54097.1|BPNIA1 B.pendula nia1 mRNA for nitrate reductase	38	6.8
341	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	38	6.8
342	gb|AE000783.1| Borrelia burgdorferi B31, complete genome	38	6.8
343	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	38	6.8
344	dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome	38	6.8
345	gb|M88330.1|BORRG23S Borrelia burgdorferi 23S ribosomal RNA gene	38	6.8
346	emb|X85745.1|BB23S5S B.burgdorferi 23S rRNA, 5S rRNA and 23S rRN...	38	6.8
347	gb|U03396.1|BBRNAOPR Borrelia burgdorferi B31 Ala-tRNA (alaT), I...	38	6.8

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 117654 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 117595

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117594 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 117535

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 117534 tccaatgccccgaaaaccc 117516

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 118738 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 118679

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118678 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 118619

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 118618 tccaatgccccgaaaaccc 118600



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 96418 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 96477

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96478 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 96537

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 96538 tccaatgccccgaaaaccc 96556

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 118738 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 118679

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118678 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 118619

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 118618 tccaatgccccgaaaaccc 118600



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 96418 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 96477

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96478 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 96537

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 96538 tccaatgccccgaaaaccc 96556

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 118687 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 118628

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118627 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 118568

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 118567 tccaatgccccgaaaaccc 118549



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 96363 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 96422

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96423 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 96482

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 96483 tccaatgccccgaaaaccc 96501

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 31508996 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 31509055

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509056 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 31509115

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 31509116 tccaatgccccgaaaaccc 31509134



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 11513106 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 11513047

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11513046 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 11512987

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 11512986 tccaatgccccgaaaaccc 11512968



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 27320554 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 27320495

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320494 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 27320435

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||| ||||||||
Sbjct: 27320434 tccaatgccctgaaaaccc 27320416

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 83600 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 83541

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83540 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 83481

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 83480 tccaatgccccgaaaaccc 83462

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 118707 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 118648

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118647 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 118588

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 118587 tccaatgccccgaaaaccc 118569



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 96411 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 96470

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96471 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 96530

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 96531 tccaatgccccgaaaaccc 96549

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 123459 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 123518

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123519 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 123578

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 123579 tccaatgccccgaaaaccc 123597



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 15185 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 15244

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15245 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 15304

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 15305 tccaatgccccgaaaaccc 15323

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 141993 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 142052

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142053 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 142112

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 142113 tccaatgccccgaaaaccc 142131

---

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 63678 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 63619

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63618 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 63559

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 63558 tccaatgccccgaaaaccc 63540

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 57426 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 57367

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57366 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 57307

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 57306 tccaatgccccgaaaaccc 57288

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                           
Query: 1       gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
               ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 9269345 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 9269404

                                                                           
Query: 61      cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
               ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269405 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 9269464

                                  
Query: 121     tccaatgccccgaaaaccc 139
               |||||||||||||||||||
Sbjct: 9269465 tccaatgccccgaaaaccc 9269483



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                           
Query: 1       gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
               ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 9228845 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 9228904

                                                                           
Query: 61      cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
               ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228905 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 9228964

                                  
Query: 121     tccaatgccccgaaaaccc 139
               |||||||||||||||||||
Sbjct: 9228965 tccaatgccccgaaaaccc 9228983



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                           
Query: 1       gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
               ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 9165433 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 9165492

                                                                           
Query: 61      cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
               ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165493 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 9165552

                                  
Query: 121     tccaatgccccgaaaaccc 139
               |||||||||||||||||||
Sbjct: 9165553 tccaatgccccgaaaaccc 9165571



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                           
Query: 1       gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
               ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 9057259 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 9057318

                                                                           
Query: 61      cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
               ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057319 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 9057378

                                  
Query: 121     tccaatgccccgaaaaccc 139
               |||||||||||||||||||
Sbjct: 9057379 tccaatgccccgaaaaccc 9057397

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 19939330 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 19939389

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939390 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 19939449

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 19939450 tccaatgccccgaaaaccc 19939468



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 10276101 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 10276042

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276041 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 10275982

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 10275981 tccaatgccccgaaaaccc 10275963



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||
Sbjct: 10388197 gggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaag 10388256

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388257 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 10388316

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 10388317 tccaatgccccgaaaaccc 10388335

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                           
Query: 1       gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
               ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 9240936 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 9240877

                                                                           
Query: 61      cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
               ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240876 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 9240817

                                  
Query: 121     tccaatgccccgaaaaccc 139
               |||||||||||||||||||
Sbjct: 9240816 tccaatgccccgaaaaccc 9240798



 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 1       gggatgtcaaaatgcatcggtnggggagcgttccgcctta 40
               ||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 3580279 gggatatcaaaatgcatcggtaggggagcgttccgcctta 3580240

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 31599512 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 31599571

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599572 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 31599631

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 31599632 tccaatgccccgaaaaccc 31599650



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 11509869 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 11509810

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509809 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 11509750

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 11509749 tccaatgccccgaaaaccc 11509731



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 27411877 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 27411818

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411817 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 27411758

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||| ||||||||
Sbjct: 27411757 tccaatgccctgaaaaccc 27411739

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 46713 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 46654

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46653 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 46594

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 46593 tccaatgccccgaaaaccc 46575

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 52149 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 52090

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52089 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 52030

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 52029 tccaatgccccgaaaaccc 52011

---

>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full
           insert sequence
          Length = 1935

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 797 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 856

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 916

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 917 tccaatgccccgaaaaccc 935

---

>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full
           insert sequence
          Length = 1345

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 71  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 130

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 190

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 191 tccaatgccccgaaaaccc 209

---

>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full
           insert sequence
          Length = 2146

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 267 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 326

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 386

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 387 tccaatgccccgaaaaccc 405

---

>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 992  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 1051

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 1111

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 1112 tccaatgccccgaaaaccc 1130

---

>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
           insert sequence
          Length = 2509

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 136 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 195

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 255

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 256 tccaatgccccgaaaaccc 274

---

>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full
           insert sequence
          Length = 1663

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 207 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 266

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 326

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 327 tccaatgccccgaaaaccc 345

---

>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full
            insert sequence
          Length = 2589

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 863  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 922

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 982

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 983  tccaatgccccgaaaaccc 1001

---

>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full
            insert sequence
          Length = 1463

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 991  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 1050

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 1110

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 1111 tccaatgccccgaaaaccc 1129

---

>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full
           insert sequence
          Length = 819

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 613 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 672

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 732

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 733 tccaatgccccgaaaaccc 751

---

>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full
            insert sequence
          Length = 1896

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 992  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 1051

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 1111

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 1112 tccaatgccccgaaaaccc 1130

---

>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full
           insert sequence
          Length = 1383

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 80  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 139

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 199

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 200 tccaatgccccgaaaaccc 218

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 19950606 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 19950665

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950666 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 19950725

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 19950726 tccaatgccccgaaaaccc 19950744



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 10282140 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 10282081

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282080 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 10282021

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 10282020 tccaatgccccgaaaaccc 10282002



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||
Sbjct: 10394236 gggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaag 10394295

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394296 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 10394355

                                   
Query: 121      tccaatgccccgaaaaccc 139
                |||||||||||||||||||
Sbjct: 10394356 tccaatgccccgaaaaccc 10394374

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 118681 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 118622

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118621 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 118562

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 118561 tccaatgccccgaaaaccc 118543



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 96358 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 96417

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96418 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 96477

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 96478 tccaatgccccgaaaaccc 96496

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 118873 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 118814

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118813 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 118754

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 118753 tccaatgccccgaaaaccc 118735



 Score =  242 bits (122), Expect = 2e-61
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 96021 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 96080

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96081 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 96140

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 96141 tccaatgccccgaaaaccc 96159

---

>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial
           sequence; chloroplast
          Length = 654

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 385 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 326

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 266

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 265 tccaatgccccgaaaaccc 247

---

>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 20761 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 20702

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20701 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 20642

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||| ||||||||
Sbjct: 20641 tccaatgccctgaaaaccc 20623

---

>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA
          Length = 519

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 235 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 176

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 116

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 115 tccaatgccccgaaaaccc 97

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 122479 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 122420

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122419 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 122360

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 122359 tccaatgccccgaaaaccc 122341



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 100258 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 100317

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100318 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 100377

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 100378 tccaatgccccgaaaaccc 100396

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||
Sbjct: 94589 gggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaag 94648

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94649 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 94708

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 94709 tccaatgccccgaaaaccc 94727

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 43697 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 43638

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43637 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 43578

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 43577 tccaatgccccgaaaaccc 43559



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 21420 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 21479

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21480 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 21539

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 21540 tccaatgccccgaaaaccc 21558

---

>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence;
           tRNA-Ala (trnA) gene, complete sequence; hypothetical
           protein gene, complete cds; ACR pseudogene, complete
           sequence; tRNA-Ile (trnI) gene, partial sequence; and
           ORF72 pseudogene, partial sequence; chloroplast genes
           for chloroplast products
          Length = 3026

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 327 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 268

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 208

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 207 tccaatgccccgaaaaccc 189

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||
Sbjct: 28653 gggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaag 28712

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28713 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 28772

                                
Query: 121   tccaatgccccgaaaaccc 139
             |||||||||||||||||||
Sbjct: 28773 tccaatgccccgaaaaccc 28791

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 122537 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 122478

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122477 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 122418

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 122417 tccaatgccccgaaaaccc 122399



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 100300 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 100359

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100360 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 100419

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 100420 tccaatgccccgaaaaccc 100438

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 6611 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 6670

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6671 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 6730

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 6731 tccaatgccccgaaaaccc 6749

---

>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full
           insert sequence
          Length = 1310

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 615 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 674

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cgggggttgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 734

                              
Query: 121 tccaatgccccgaaaaccc 139
           |||||||||||||||||||
Sbjct: 735 tccaatgccccgaaaaccc 753

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 123254 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 123195

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123194 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 123135

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 123134 tccaatgccccgaaaaccc 123116



 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 100977 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 101036

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101037 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 101096

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 101097 tccaatgccccgaaaaccc 101115

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  234 bits (118), Expect = 6e-59
 Identities = 133/139 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||
Sbjct: 1199 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaag 1258

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 1318

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 1319 tccaatgccccgaaaaccc 1337

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  232 bits (117), Expect = 2e-58
 Identities = 129/134 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
                ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 33526828 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 33526887

                                                                            
Query: 61       cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
                ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526888 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 33526947

                              
Query: 121      tccaatgccccgaa 134
                ||||||||||||||
Sbjct: 33526948 tccaatgccccgaa 33526961



 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                           
Query: 65      ggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 124
               |||||| ||| |||| | ||||||||| ||||||||||| ||||||| ||| ||||||||
Sbjct: 1076733 ggtcgatgaagcggatgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatcca 1076675

                              
Query: 125     atgccccgaaaaccc 139
               ||||| |||||||||
Sbjct: 1076674 atgcctcgaaaaccc 1076660



 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 95       ttgagtaacgaaaacattggtgagaatc 122
                ||||||||||||||||||||||||||||
Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146



 Score = 46.1 bits (23), Expect = 0.028
 Identities = 73/89 (82%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                           
Query: 15      catcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaa 74
               ||||||| || ||| |||| |||||| | |||||||||||  ||||| | ||||||| ||
Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagcag-ggtcgacaaa 1076835

                                            
Query: 75      ccggaagcgagaatgtcggcttgagtaac 103
                 ||||| |||||||| |||| |||||||
Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  232 bits (117), Expect = 2e-58
 Identities = 129/134 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 72025 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 72084

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72085 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 72144

                           
Query: 121   tccaatgccccgaa 134
             ||||||||||||||
Sbjct: 72145 tccaatgccccgaa 72158



 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 95    ttgagtaacgaaaacattggtgagaatc 122
             ||||||||||||||||||||||||||||
Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343

---

>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence
          Length = 1750

 Score =  202 bits (102), Expect = 2e-49
 Identities = 129/139 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |  ||
Sbjct: 1188 gggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgag 1247

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1248 cggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1307

                               
Query: 121  tccaatgccccgaaaaccc 139
            |||||||||||||||||||
Sbjct: 1308 tccaatgccccgaaaaccc 1326

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  202 bits (102), Expect = 2e-49
 Identities = 129/139 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |  ||
Sbjct: 131809 gggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgag 131750

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 131749 cggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 131690

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 131689 tccaatgccccgaaaaccc 131671



 Score =  202 bits (102), Expect = 2e-49
 Identities = 129/139 (92%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |  ||
Sbjct: 104955 gggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgag 105014

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 105015 cggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 105074

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 105075 tccaatgccccgaaaaccc 105093

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  202 bits (102), Expect = 2e-49
 Identities = 129/139 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |  ||
Sbjct: 132770 gggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgag 132711

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 132710 cggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 132651

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 132650 tccaatgccccgaaaaccc 132632



 Score =  202 bits (102), Expect = 2e-49
 Identities = 129/139 (92%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |  ||
Sbjct: 105879 gggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgag 105938

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 105939 cggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 105998

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 105999 tccaatgccccgaaaaccc 106017

---

>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon
          Length = 2900

 Score =  200 bits (101), Expect = 8e-49
 Identities = 128/138 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||| || ||
Sbjct: 824 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgagag 883

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 884 cgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 943

                             
Query: 121 tccaatgccccgaaaacc 138
           ||||||||||||||||||
Sbjct: 944 tccaatgccccgaaaacc 961

---

>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full
            insert sequence
          Length = 1109

 Score =  196 bits (99), Expect = 1e-47
 Identities = 111/116 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 994  gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 1053

                                                                    
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtg 116
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  192 bits (97), Expect = 2e-46
 Identities = 127/138 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | |||
Sbjct: 126678 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaag 126619

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126618 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 126559

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 126558 tccaatgccccgaaaacc 126541



 Score =  192 bits (97), Expect = 2e-46
 Identities = 127/138 (92%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | |||
Sbjct: 108244 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaag 108303

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 108304 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 108363

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 108364 tccaatgccccgaaaacc 108381

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  184 bits (93), Expect = 5e-44
 Identities = 126/138 (91%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| ||||||||| ||| || ||
Sbjct: 138520 gggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagag 138461

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 138460 caggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 138401

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 138400 tccaatgccccgaaaacc 138383



 Score =  184 bits (93), Expect = 5e-44
 Identities = 126/138 (91%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| ||||||||| ||| || ||
Sbjct: 110779 gggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagag 110838

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110839 caggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 110898

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 110899 tccaatgccccgaaaacc 110916

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  178 bits (90), Expect = 3e-42
 Identities = 126/139 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| ||||||||||||||||||  |||||||| ||| |  ||
Sbjct: 138315 gggatgtaaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgag 138256

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 138255 cgggagtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 138196

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 138195 tccaatgccccgaaaaccc 138177



 Score =  178 bits (90), Expect = 3e-42
 Identities = 126/139 (90%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| ||||||||||||||||||  |||||||| ||| |  ||
Sbjct: 110782 gggatgtaaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgag 110841

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110842 cgggagtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 110901

                                 
Query: 121    tccaatgccccgaaaaccc 139
              |||||||||||||||||||
Sbjct: 110902 tccaatgccccgaaaaccc 110920

---

>gb|DQ481232.1| Populus suaveolens unknown gene
          Length = 854

 Score =  176 bits (89), Expect = 1e-41
 Identities = 126/138 (91%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||| ||||||||||||| |||||||||||||| ||| ||||||||| ||| |  ||
Sbjct: 141 gggatgtaaaaatgcatcggtaggggagcgttccgc-ttagagggaagcacccgcgcgag 199

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 cgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 259

                             
Query: 121 tccaatgccccgaaaacc 138
           ||||||||||||||||||
Sbjct: 260 tccaatgccccgaaaacc 277

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  176 bits (89), Expect = 1e-41
 Identities = 125/138 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||| | |||
Sbjct: 133034 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaag 132975

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 132974 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 132915

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 132914 tccaatgccccgaaaacc 132897



 Score =  176 bits (89), Expect = 1e-41
 Identities = 125/138 (90%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||| | |||
Sbjct: 104937 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaag 104996

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 104997 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 105056

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 105057 tccaatgccccgaaaacc 105074

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 131586 gggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 131527

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 131526 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 131467

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 131466 tccaatgccccgaaaacc 131449



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 105292 gggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 105351

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 105352 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 105411

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 105412 tccaatgccccgaaaacc 105429

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 135111 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 135052

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 135051 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134992

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134991 tccaatgccccgaaaacc 134974



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 107519 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 107578

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107579 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107638

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107639 tccaatgccccgaaaacc 107656

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 130478 gggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 130419

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 130418 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 130359

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 130358 tccaatgccccgaaaacc 130341



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 104157 gggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 104216

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 104217 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 104276

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 104277 tccaatgccccgaaaacc 104294

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 134712 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgag 134653

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134652 cagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134593

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134592 tccaatgccccgaaaacc 134575



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 107194 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgag 107253

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107254 cagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107313

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107314 tccaatgccccgaaaacc 107331

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 138391 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 138332

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 138331 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 138272

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 138271 tccaatgccccgaaaacc 138254



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 111554 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 111613

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 111614 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 111673

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 111674 tccaatgccccgaaaacc 111691

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 140918 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 140859

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 140858 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 140799

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 140798 tccaatgccccgaaaacc 140781



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 112739 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 112798

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 112799 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 112858

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 112859 tccaatgccccgaaaacc 112876

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 135749 gggatgtaaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgag 135690

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 135689 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 135630

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 135629 tccaatgccccgaaaacc 135612



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 107808 gggatgtaaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgag 107867

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107868 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107927

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107928 tccaatgccccgaaaacc 107945

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 141690 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 141631

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 141630 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 141571

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 141570 tccaatgccccgaaaacc 141553



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 111638 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 111697

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 111698 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 111757

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 111758 tccaatgccccgaaaacc 111775

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 2713 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 2772

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2773 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 2832

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 2833 tccaatgccccgaaaacc 2850

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 134357 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 134298

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134297 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134238

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134237 tccaatgccccgaaaacc 134220



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 106679 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 106738

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106739 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 106798

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 106799 tccaatgccccgaaaacc 106816

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 2958 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 3017

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3018 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 3077

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 3078 tccaatgccccgaaaacc 3095

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3020

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 1193 gggatgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgag 1252

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1253 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1312

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1313 tccaatgccccgaaaacc 1330

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| ||||||| | ||| |  ||
Sbjct: 135403 gggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgag 135344

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 135343 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 135284

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 135283 tccaatgccccgaaaacc 135266



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| ||||||| | ||| |  ||
Sbjct: 107022 gggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgag 107081

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107082 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107141

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107142 tccaatgccccgaaaacc 107159

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 134492 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 134433

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134432 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134373

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134372 tccaatgccccgaaaacc 134355



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 106851 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 106910

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106911 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 106970

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 106971 tccaatgccccgaaaacc 106988

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 134490 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 134431

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134430 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134371

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134370 tccaatgccccgaaaacc 134353



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 106848 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 106907

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106908 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 106967

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 106968 tccaatgccccgaaaacc 106985

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 134402 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 134343

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134342 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134283

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134282 tccaatgccccgaaaacc 134265



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 106726 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 106785

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106786 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 106845

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 106846 tccaatgccccgaaaacc 106863

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 134991 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgag 134932

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134931 cagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134872

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134871 tccaatgccccgaaaacc 134854



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 107416 gggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgag 107475

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107476 cagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107535

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107536 tccaatgccccgaaaacc 107553

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 135109 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 135050

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 135049 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134990

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134989 tccaatgccccgaaaacc 134972



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 107517 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 107576

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107577 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107636

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107637 tccaatgccccgaaaacc 107654

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 116956 gggatgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgag 116897

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 116896 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 116837

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 116836 tccaatgccccgaaaacc 116819



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 91146 gggatgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgag 91205

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 91206 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 91265

                               
Query: 121   tccaatgccccgaaaacc 138
             ||||||||||||||||||
Sbjct: 91266 tccaatgccccgaaaacc 91283

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 131579 gggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 131520

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 131519 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 131460

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 131459 tccaatgccccgaaaacc 131442



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||| ||| |  ||
Sbjct: 105290 gggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgag 105349

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              |||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 105350 cggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 105409

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 105410 tccaatgccccgaaaacc 105427

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 134840 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 134781

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134780 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134721

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134720 tccaatgccccgaaaacc 134703



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 107298 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 107357

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107358 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 107417

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 107418 tccaatgccccgaaaacc 107435

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 134369 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 134310

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 134309 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 134250

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 134249 tccaatgccccgaaaacc 134232



 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 106693 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 106752

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106753 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 106812

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 106813 tccaatgccccgaaaacc 106830

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  168 bits (85), Expect = 3e-39
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 1286 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 1345

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1346 cggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1405

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1406 tccaatgccccgaaaacc 1423

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  161 bits (81), Expect = 7e-37
 Identities = 123/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            |||||||| |||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 5086 gggatgtcgaaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgag 5145

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5146 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 5205

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 5206 tccaatgccccgaaaacc 5223

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  161 bits (81), Expect = 7e-37
 Identities = 123/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            |||||||| |||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 1196 gggatgtcgaaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgag 1255

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1256 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1315

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1316 tccaatgccccgaaaacc 1333

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  161 bits (81), Expect = 7e-37
 Identities = 123/138 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              |||||||| |||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 150049 gggatgtcgaaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgag 149990

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 149989 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 149930

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 149929 tccaatgccccgaaaacc 149912



 Score =  161 bits (81), Expect = 7e-37
 Identities = 123/138 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              |||||||| |||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 118617 gggatgtcgaaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgag 118676

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 118677 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 118736

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 118737 tccaatgccccgaaaacc 118754

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  161 bits (81), Expect = 7e-37
 Identities = 123/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| |||| |||||||| ||||||||||||||||||  |||||||| | | |  ||
Sbjct: 1190 gggatgtaaaaaggcatcggtaggggagcgttccgccttagggggaagcacctgcgcgag 1249

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1250 cagcggtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1309

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1310 tccaatgccccgaaaacc 1327

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete
            sequence
          Length = 3503

 Score =  161 bits (81), Expect = 7e-37
 Identities = 123/138 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            |||||||| |||| ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 1196 gggatgtcgaaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgag 1255

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1256 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1315

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1316 tccaatgccccgaaaacc 1333

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  157 bits (79), Expect = 1e-35
 Identities = 120/132 (90%), Gaps = 2/132 (1%)
 Strand = Plus / Minus

                                                                          
Query: 9      aaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaagc-ggng-g 66
              ||||||||||||| |||||||||||||||||| ||||||||| ||| |  ||| || | |
Sbjct: 139163 aaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtg 139104

                                                                          
Query: 67     tcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 126
              | |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 139103 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 139044

                          
Query: 127    gccccgaaaacc 138
              ||||||||||||
Sbjct: 139043 gccccgaaaacc 139032



 Score =  157 bits (79), Expect = 1e-35
 Identities = 120/132 (90%), Gaps = 2/132 (1%)
 Strand = Plus / Plus

                                                                          
Query: 9      aaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaagc-ggng-g 66
              ||||||||||||| |||||||||||||||||| ||||||||| ||| |  ||| || | |
Sbjct: 110897 aaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtg 110956

                                                                          
Query: 67     tcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 126
              | |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 110957 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 111016

                          
Query: 127    gccccgaaaacc 138
              ||||||||||||
Sbjct: 111017 gccccgaaaacc 111028

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  153 bits (77), Expect = 2e-34
 Identities = 123/138 (89%), Gaps = 1/138 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||| ||| ||||||||  ||| |  ||
Sbjct: 133802 gggatgtaaaaatgcatcggtaggggagcgttccgc-ttagagggaagctcccgcgcgag 133744

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 133743 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 133684

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 133683 tccaatgccccgaaaacc 133666



 Score =  153 bits (77), Expect = 2e-34
 Identities = 123/138 (89%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| ||||||||||||| |||||||||||||| ||| ||||||||  ||| |  ||
Sbjct: 106480 gggatgtaaaaatgcatcggtaggggagcgttccgc-ttagagggaagctcccgcgcgag 106538

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106539 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 106598

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 106599 tccaatgccccgaaaacc 106616

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
            genes, complete sequence; chloroplast
          Length = 3069

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| |||| |||||||| ||||||||||||| ||||  |||||||| | | |  ||
Sbjct: 1205 gggatgtaaaaaggcatcggtaggggagcgttccgtcttagggggaagcacctgcgcgag 1264

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1265 cagtggtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1324

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1325 tccaatgccccgaaaacc 1342

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||| ||||||| |||||||||||||||| | || |||||| | | |  ||
Sbjct: 87451 gggatgtcaaaatacatcggtaggggagcgttccgcctcagagagaagcaccggcgcgag 87510

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 87511 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 87570

                               
Query: 121   tccaatgccccgaaaacc 138
             ||||||||||||||||||
Sbjct: 87571 tccaatgccccgaaaacc 87588

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||  ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 145361 gggatgtcaaaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcgag 145302

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || ||| || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 145301 caggtgtggacaaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 145242

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 145241 tccaatgccccgaaaacc 145224



 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||  ||||||| |||||||||||||||||| ||||||||| | | |  ||
Sbjct: 113101 gggatgtcaaaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcgag 113160

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || ||| || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 113161 caggtgtggacaaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 113220

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 113221 tccaatgccccgaaaacc 113238

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||  ||||||| ||||||||||||||||||  |||||||| | | |  ||
Sbjct: 1193 gggatgtcaaaaaacatcggtaggggagcgttccgccttagggggaagcaccagcgcgag 1252

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1253 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1312

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1313 tccaatgccccgaaaacc 1330

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||| ||||||| ||||||||||||||||||  | |||||| | | |  ||
Sbjct: 1197 gggatgtcaaaatacatcggtaggggagcgttccgccttagggagaagcaccagcgtgag 1256

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1257 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1316

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1317 tccaatgccccgaaaacc 1334

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||| ||||||| |||||||||||||||||| || |||||  | | |  ||
Sbjct: 1177 gggatgtcaaaatacatcggtaggggagcgttccgccttagagagaagcgccagcgtgag 1236

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1237 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 1296

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 1297 tccaatgccccgaaaacc 1314

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| |||||| |||||| |||||||||||||||||| ||||||| | ||| |  ||
Sbjct: 129341 gggatgtaaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgag 129282

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | | ||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 129281 cagtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaa 129222

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||| ||||||||
Sbjct: 129221 tccaatgcctcgaaaacc 129204



 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| |||||| |||||| |||||||||||||||||| ||||||| | ||| |  ||
Sbjct: 103115 gggatgtaaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgag 103174

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | | ||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 103175 cagtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaa 103234

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||| ||||||||
Sbjct: 103235 tccaatgcctcgaaaacc 103252

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| |||||| |||||| |||||||||||||||||| |  |||| | ||| |  ||
Sbjct: 5681 gggatgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgag 5740

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | | | | |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5741 cagggttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 5800

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 5801 tccaatgccccgaaaacc 5818

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| |||||| |||||| |||||||||||||||||| |  |||| | ||| |  ||
Sbjct: 5681 gggatgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgag 5740

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | | | | |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5741 cagggttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 5800

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 5801 tccaatgccccgaaaacc 5818

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  153 bits (77), Expect = 2e-34
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||| ||||| ||||||| |||||||||||||||| | ||||||||| | | |  ||
Sbjct: 89538 gggatgtaaaaatacatcggtaggggagcgttccgcctcagagggaagcaccggcgcgag 89597

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             | |  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 89598 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 89657

                               
Query: 121   tccaatgccccgaaaacc 138
             ||||||||||||||||||
Sbjct: 89658 tccaatgccccgaaaacc 89675

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  145 bits (73), Expect = 4e-32
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||||||||  ||||||| |||||||||||||||  | | ||||||| | | |  ||
Sbjct: 145121 gggatgtcaaaaaacatcggtaggggagcgttccgccccagatggaagcaccagtgcgag 145180

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | |  || |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145181 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 145240

                                
Query: 121    tccaatgccccgaaaacc 138
              ||||||||||||||||||
Sbjct: 145241 tccaatgccccgaaaacc 145258



 Score =  145 bits (73), Expect = 4e-32
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||||||||  ||||||| |||||||||||||||  | | ||||||| | | |  ||
Sbjct: 87730 gggatgtcaaaaaacatcggtaggggagcgttccgccccagatggaagcaccagtgcgag 87671

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             | |  || |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87670 caggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 87611

                               
Query: 121   tccaatgccccgaaaacc 138
             ||||||||||||||||||
Sbjct: 87610 tccaatgccccgaaaacc 87593

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  145 bits (73), Expect = 4e-32
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||| ||||  ||||||| |||||||||||||||||| ||||||||  | |    ||
Sbjct: 51495 gggatgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgag 51436

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 51435 cagcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 51376

                               
Query: 121   tccaatgccccgaaaacc 138
             ||||||||||||||||||
Sbjct: 51375 tccaatgccccgaaaacc 51358



 Score =  145 bits (73), Expect = 4e-32
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
             ||||||| ||||  ||||||| |||||||||||||||||| ||||||||  | |    ||
Sbjct: 38333 gggatgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgag 38392

                                                                         
Query: 61    cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
             | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 38393 cagcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 38452

                               
Query: 121   tccaatgccccgaaaacc 138
             ||||||||||||||||||
Sbjct: 38453 tccaatgccccgaaaacc 38470

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  145 bits (73), Expect = 4e-32
 Identities = 115/130 (88%)
 Strand = Plus / Plus

                                                                        
Query: 9    aaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtc 68
            ||||| ||||||| |||||||||||||||||| ||||||||  | |    ||| | ||| 
Sbjct: 1203 aaaatacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtg 1262

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1263 gacgaaacggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1322

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1323 cccgaaaacc 1332

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  145 bits (73), Expect = 4e-32
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| ||||  ||||||| |||||||||||||||||| ||||||||  | |    ||
Sbjct: 5261 gggatgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgag 5320

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            | | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5321 cagcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaa 5380

                              
Query: 121  tccaatgccccgaaaacc 138
            ||||||||||||||||||
Sbjct: 5381 tccaatgccccgaaaacc 5398

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  141 bits (71), Expect = 6e-31
 Identities = 123/139 (88%), Gaps = 3/139 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaac-cgngaaa 59
              ||||||||||||| ||||||| ||||||||||||||||||  | |||||| | || ||  
Sbjct: 115018 gggatgtcaaaatacatcggtaggggagcgttccgccttagggagaagcatcacgtga-- 114961

                                                                          
Query: 60     gcggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 119
              || |  || |||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 114960 gcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgaga 114901

                                 
Query: 120    atccaatgccccgaaaacc 138
              |||||||||||||||||||
Sbjct: 114900 atccaatgccccgaaaacc 114882



 Score =  141 bits (71), Expect = 6e-31
 Identities = 123/139 (88%), Gaps = 3/139 (2%)
 Strand = Plus / Plus

                                                                         
Query: 1     gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaac-cgngaaa 59
             ||||||||||||| ||||||| ||||||||||||||||||  | |||||| | || ||  
Sbjct: 87102 gggatgtcaaaatacatcggtaggggagcgttccgccttagggagaagcatcacgtga-- 87159

                                                                         
Query: 60    gcggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 119
             || |  || |||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 87160 gcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgaga 87219

                                
Query: 120   atccaatgccccgaaaacc 138
             |||||||||||||||||||
Sbjct: 87220 atccaatgccccgaaaacc 87238

---

>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2867

 Score =  141 bits (71), Expect = 6e-31
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||| |||||||||| || |||||||||||||||||| ||||||||||||| |  ||
Sbjct: 1186 gggatgtaaaaatgcatccgtaggggagcgttccgccttaaagggaagcaaccgcgccag 1245

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
            |   ||| |||||| ||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 1246 caagggtggacgaagcggaagcgaaaatgtccgcttgagtaacgcaaacattggtgagaa 1305

                            
Query: 121  tccaatgccccgaaaa 136
            || |||||||| ||||
Sbjct: 1306 tctaatgcccccaaaa 1321

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  139 bits (70), Expect = 2e-30
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| |||| | |||||| |||||||||||||||||| ||||||| | ||| |  ||
Sbjct: 130678 gggatgtaaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcgag 130619

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | | | | |||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 130618 cagtgctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaa 130559

                                 
Query: 121    tccaatgccccgaaaaccc 139
              ||||||||| |||||||||
Sbjct: 130558 tccaatgcctcgaaaaccc 130540



 Score =  139 bits (70), Expect = 2e-30
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
              ||||||| |||| | |||||| |||||||||||||||||| ||||||| | ||| |  ||
Sbjct: 104716 gggatgtaaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcgag 104775

                                                                          
Query: 61     cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | | | | |||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 104776 cagtgctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaa 104835

                                 
Query: 121    tccaatgccccgaaaaccc 139
              ||||||||| |||||||||
Sbjct: 104836 tccaatgcctcgaaaaccc 104854

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  137 bits (69), Expect = 1e-29
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                        
Query: 9    aaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtc 68
            |||||| |||||| |||||||||||||||||| |  |||| | ||| |  ||| | | | 
Sbjct: 5417 aaaatgaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttg 5476

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5477 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 5536

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 5537 cccgaaaacc 5546

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  137 bits (69), Expect = 1e-29
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                         
Query: 9     aaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtc 68
             |||||| |||||| |||||||||||||||||| |  |||| | ||| |  ||| | | | 
Sbjct: 22508 aaaatgaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttg 22449

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22448 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 22389

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 22388 cccgaaaacc 22379

---

>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene
           for chloroplast product
          Length = 1041

 Score =  131 bits (66), Expect = 6e-28
 Identities = 121/139 (87%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           |||||||||||||| |||||| ||||| ||||||||||||  |||||| | ||| |  ||
Sbjct: 461 gggatgtcaaaatgaatcggtagggga-cgttccgccttagggggaaggacccgcgcgag 519

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           | | | | |||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 520 cagtgctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaa 579

                              
Query: 121 tccaatgccccgaaaaccc 139
           ||||||||| |||||||||
Sbjct: 580 tccaatgcctcgaaaaccc 598

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  127 bits (64), Expect = 9e-27
 Identities = 64/64 (100%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634545 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 5634486

                   
Query: 136     accc 139
               ||||
Sbjct: 5634485 accc 5634482

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  127 bits (64), Expect = 9e-27
 Identities = 64/64 (100%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634534 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 5634475

                   
Query: 136     accc 139
               ||||
Sbjct: 5634474 accc 5634471

---

>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  127 bits (64), Expect = 9e-27
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                         
Query: 76    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18340 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 18399

                 
Query: 136   accc 139
             ||||
Sbjct: 18400 accc 18403

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score =  125 bits (63), Expect = 4e-26
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                        
Query: 16   atcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaac 75
            |||||| |||||||||||||||||| |  ||||||   | | |||| |  || |||||| 
Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271

                
Query: 136  accc 139
            ||||
Sbjct: 1272 accc 1275

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 130474 cccgaaaacc 130465



 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 102971 cccgaaaacc 102980



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                 
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccg 35
              ||||||| ||||  ||||||| |||||||||||||
Sbjct: 130602 gggatgtaaaaaaacatcggtaggggagcgttccg 130568



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                 
Query: 1      gggatgtcaaaatgcatcggtnggggagcgttccg 35
              ||||||| ||||  ||||||| |||||||||||||
Sbjct: 102843 gggatgtaaaaaaacatcggtaggggagcgttccg 102877

---

>gb|L42986.1|RTCCPRGOLA Carteria lunzensis
          Length = 4448

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1384

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1385 cccgaaaacc 1394

---

>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 7514

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1522

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1523 cccgaaaacc 1532

---

>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4038

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1386 cccgaaaacc 1395

---

>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4406

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1330

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1331 cccgaaaacc 1340

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 151056 cccgaaaacc 151047



 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 43147 cccgaaaacc 43156

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3349

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1255 gacgaagcggaagcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgc 1314

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1315 cccgaaaacc 1324

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5293 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 5352

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 5353 cccgaaaacc 5362

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3257

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1260 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1319

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1320 cccgaaaacc 1329

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1260 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1319

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1320 cccgaaaacc 1329

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1753 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1812

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1813 cccgaaaacc 1822

---

>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1
          Length = 1964

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1330

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1331 cccgaaaacc 1340

---

>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1
          Length = 2572

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1386 cccgaaaacc 1395

---

>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA
          Length = 2603

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1319 cccgaaaacc 1328

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 127181 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 127122

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 127121 cccgaaaacc 127112



 Score =  123 bits (62), Expect = 1e-25
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 96266 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 96325

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 96326 cccgaaaacc 96335

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  117 bits (59), Expect = 9e-24
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1361 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1420

                       
Query: 129  cccgaaaaccc 139
            |||||||||||
Sbjct: 1421 cccgaaaaccc 1431



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 14   gcatcggtnggggagcgttccgc 36
            |||||||| ||||||||||||||
Sbjct: 1306 gcatcggtaggggagcgttccgc 1328

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score =  117 bits (59), Expect = 9e-24
 Identities = 62/63 (98%)
 Strand = Plus / Minus

                                                                          
Query: 76     cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154932 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 154873

                 
Query: 136    acc 138
              |||
Sbjct: 154872 acc 154870



 Score =  117 bits (59), Expect = 9e-24
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                         
Query: 76    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78960 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 79019

                
Query: 136   acc 138
             |||
Sbjct: 79020 acc 79022

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2754

 Score =  117 bits (59), Expect = 9e-24
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   catcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaa 74
            ||||||| ||||||||||| |||||| ||||||||| | |    ||| | ||| || |||
Sbjct: 1233 catcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaa 1292

                                                                        
Query: 75   ccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 134
             | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1293 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1352

                
Query: 135  aacc 138
            ||||
Sbjct: 1353 aacc 1356

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  117 bits (59), Expect = 9e-24
 Identities = 107/124 (86%)
 Strand = Plus / Minus

                                                                        
Query: 15   catcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaa 74
            ||||||| |||||||||||||  | | || |||||| ||| |  ||| |  || ||||||
Sbjct: 5360 catcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaa 5301

                                                                        
Query: 75   ccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 134
             |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5300 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 5241

                
Query: 135  aacc 138
            ||||
Sbjct: 5240 aacc 5237

---

>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 4173

 Score =  117 bits (59), Expect = 9e-24
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                       
Query: 80   agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1487

---

>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmoI genes
          Length = 8176

 Score =  117 bits (59), Expect = 9e-24
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                       
Query: 80   agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1773

---

>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5398

 Score =  117 bits (59), Expect = 9e-24
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1456

               
Query: 136  acc 138
            |||
Sbjct: 1457 acc 1459

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  117 bits (59), Expect = 9e-24
 Identities = 68/71 (95%)
 Strand = Plus / Minus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 138001 gacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgc 137942

                         
Query: 129    cccgaaaaccc 139
              |||||||||||
Sbjct: 137941 cccgaaaaccc 137931



 Score =  117 bits (59), Expect = 9e-24
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 83876 gacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgc 83935

                        
Query: 129   cccgaaaaccc 139
             |||||||||||
Sbjct: 83936 cccgaaaaccc 83946



 Score = 42.1 bits (21), Expect = 0.43
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 15     catcggtnggggagcgttccgcct 38
              ||||||| ||||||||||||||||
Sbjct: 138058 catcggtaggggagcgttccgcct 138035



 Score = 42.1 bits (21), Expect = 0.43
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    catcggtnggggagcgttccgcct 38
             ||||||| ||||||||||||||||
Sbjct: 83819 catcggtaggggagcgttccgcct 83842

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  117 bits (59), Expect = 9e-24
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1244 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1303

                       
Query: 129  cccgaaaaccc 139
            |||||||||||
Sbjct: 1304 cccgaaaaccc 1314



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 14   gcatcggtnggggagcgttccgc 36
            |||||||| ||||||||||||||
Sbjct: 1189 gcatcggtaggggagcgttccgc 1211

---

>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2665

 Score =  117 bits (59), Expect = 9e-24
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1348

               
Query: 136  acc 138
            |||
Sbjct: 1349 acc 1351

---

>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2704

 Score =  117 bits (59), Expect = 9e-24
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1361

               
Query: 136  acc 138
            |||
Sbjct: 1362 acc 1364

---

>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) gene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 4577

 Score =  117 bits (59), Expect = 9e-24
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3117

               
Query: 136  acc 138
            |||
Sbjct: 3118 acc 3120

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  117 bits (59), Expect = 9e-24
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1257 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1316

                       
Query: 129  cccgaaaaccc 139
            |||||||||||
Sbjct: 1317 cccgaaaaccc 1327



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 14   gcatcggtnggggagcgttccgc 36
            |||||||| ||||||||||||||
Sbjct: 1202 gcatcggtaggggagcgttccgc 1224

---

>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 34.90
          Length = 4586

 Score =  117 bits (59), Expect = 9e-24
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3073 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgc 3132

                       
Query: 129  cccgaaaaccc 139
            |||||||||||
Sbjct: 3133 cccgaaaaccc 3143

---

>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 6393

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3576

                      
Query: 129  cccgaaaacc 138
            || |||||||
Sbjct: 3577 cctgaaaacc 3586

---

>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 5575

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2112 gacgaatcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgc 2171

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 2172 cccgaaaacc 2181

---

>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3669

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1298 cccgaaaacc 1307

---

>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3397

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1532 gacgaagcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgc 1591

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1592 cccgaaaacc 1601

---

>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 2792

 Score =  115 bits (58), Expect = 4e-23
 Identities = 61/62 (98%)
 Strand = Plus / Plus

                                                                        
Query: 77   ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 136
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 ggaagcgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1452

              
Query: 137  cc 138
            ||
Sbjct: 1453 cc 1454

---

>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2888

 Score =  115 bits (58), Expect = 4e-23
 Identities = 61/62 (98%)
 Strand = Plus / Plus

                                                                        
Query: 77   ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 136
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479

              
Query: 137  cc 138
            ||
Sbjct: 1480 cc 1481

---

>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2786

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1429 cccgaaaacc 1438

---

>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial
            sequence; chloroplast
          Length = 2661

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1328 cccgaaaacc 1337

---

>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2834

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1492 cccgaaaacc 1501

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2571

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1246 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgc 1305

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1306 cccgaaaacc 1315

---

>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2864

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1501 gacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatccaatgc 1560

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1561 cccgaaaacc 1570

---

>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2552

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1285 cccgaaaacc 1294

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 114416 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgc 114357

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 114356 cccgaaaacc 114347



 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 87572 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgc 87631

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 87632 cccgaaaacc 87641

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
            (rrl) gene, complete sequence; chloroplast gene for
            chloroplast product
          Length = 2875

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1246 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1305

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1306 cccgaaaacc 1315

---

>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 26107 cccgaaaacc 26116

---

>emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2
          Length = 1291

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                       
Query: 69  gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
           |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacgaatcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgc 324

                     
Query: 129 cccgaaaacc 138
           ||||||||||
Sbjct: 325 cccgaaaacc 334

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 124019 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 123960

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 123959 cccgaaaacc 123950



 Score =  115 bits (58), Expect = 4e-23
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 95847 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 95906

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 95907 cccgaaaacc 95916

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score =  113 bits (57), Expect = 1e-22
 Identities = 102/118 (86%)
 Strand = Plus / Plus

                                                                        
Query: 18   cggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaaccg 77
            |||| ||||||||||||||  ||  | |||||| | | |||||| |  || |||||| ||
Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251

                                                                      
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1309

---

>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 3875

 Score =  111 bits (56), Expect = 6e-22
 Identities = 59/60 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1335

---

>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2632

 Score =  111 bits (56), Expect = 6e-22
 Identities = 59/60 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1324

---

>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; chloroplast genes for chloroplast products
          Length = 5057

 Score =  111 bits (56), Expect = 6e-22
 Identities = 59/60 (98%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3206

---

>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene
          Length = 2904

 Score =  111 bits (56), Expect = 6e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                    
Query: 83   gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1342

---

>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-ChuI gene
          Length = 4005

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1283 cggaagtgagaatgtcggcttgagtaacgaaaacattggtaagaatccaatgccccgaaa 1342

               
Query: 136  acc 138
            |||
Sbjct: 1343 acc 1345

---

>gb|L43540.1|DUNCPRRNL Dunaliella parva
          Length = 5685

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1837

               
Query: 136  acc 138
            |||
Sbjct: 1838 acc 1840

---

>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3455

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1559

               
Query: 136  acc 138
            |||
Sbjct: 1560 acc 1562

---

>gb|L43500.1|RTCCPRRNL Carteria olivieri
          Length = 5667

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931

               
Query: 136  acc 138
            |||
Sbjct: 1932 acc 1934

---

>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3923

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1394

               
Query: 136  acc 138
            |||
Sbjct: 1395 acc 1397

---

>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3978

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377

               
Query: 136  acc 138
            |||
Sbjct: 1378 acc 1380

---

>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CelI gene
          Length = 3779

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1306 cggaagtgagaatgtcggcttgagtaacgaaaacattggttagaatccaatgccccgaaa 1365

               
Query: 136  acc 138
            |||
Sbjct: 1366 acc 1368

---

>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2863

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1264 cggaagtgagaatgtcggcttgagtaacgaaaacattggtaagaatccaatgccccgaaa 1323

               
Query: 136  acc 138
            |||
Sbjct: 1324 acc 1326

---

>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmuI gene
          Length = 3744

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1373

               
Query: 136  acc 138
            |||
Sbjct: 1374 acc 1376

---

>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2622

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1239 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1298

               
Query: 136  acc 138
            |||
Sbjct: 1299 acc 1301

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2888

 Score =  109 bits (55), Expect = 2e-21
 Identities = 106/124 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   catcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaa 74
            ||||||| ||||||||||| ||  || || |||||| | | |||| | |  || ||||||
Sbjct: 1187 catcggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaa 1246

                                                                        
Query: 75   ccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 134
             | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1247 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1306

                
Query: 135  aacc 138
            ||||
Sbjct: 1307 aacc 1310

---

>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1
          Length = 2749

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1559

               
Query: 136  acc 138
            |||
Sbjct: 1560 acc 1562

---

>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1
          Length = 2676

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1394

               
Query: 136  acc 138
            |||
Sbjct: 1395 acc 1397

---

>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1
          Length = 2524

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1283 cggaagtgagaatgtcggcttgagtaacgaaaacattggtaagaatccaatgccccgaaa 1342

               
Query: 136  acc 138
            |||
Sbjct: 1343 acc 1345

---

>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S
            rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and
            ITS1, strain SAG 45.88
          Length = 3065

 Score =  109 bits (55), Expect = 2e-21
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785

                       
Query: 129  cccgaaaaccc 139
            |||||||||||
Sbjct: 1786 cccgaaaaccc 1796

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Minus

                                                                          
Query: 76     cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
              |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117

                 
Query: 136    acc 138
              |||
Sbjct: 114116 acc 114114



 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400

               
Query: 136  acc 138
            |||
Sbjct: 3401 acc 3403

---

>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S
           rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene
          Length = 6689

 Score =  109 bits (55), Expect = 2e-21
 Identities = 118/138 (85%), Gaps = 4/138 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
           ||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||| |  ||
Sbjct: 649 gggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgag 708

                                                                       
Query: 61  cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
           ||| ||| |||||| ||||||||||||||||  | |||||   | |||||||||||||||
Sbjct: 709 cggtggtggacgaagcggaagcgagaatgtc-acgtgagt---gcaaacattggtgagaa 764

                             
Query: 121 tccaatgccccgaaaacc 138
           ||||||||||||||||||
Sbjct: 765 tccaatgccccgaaaacc 782

---

>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-AstI gene
          Length = 4859

 Score =  107 bits (54), Expect = 9e-21
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                        
Query: 77   ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 136
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1323 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccggaaa 1382

              
Query: 137  cc 138
            ||
Sbjct: 1383 cc 1384

---

>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94
          Length = 4290

 Score =  107 bits (54), Expect = 9e-21
 Identities = 105/123 (85%)
 Strand = Plus / Plus

                                                                        
Query: 16   atcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaac 75
            |||||| ||||||||||| || ||| |  ||||||   | | ||||||  || |||||| 
Sbjct: 2737 atcggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaag 2796

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2797 cagaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 2856

               
Query: 136  acc 138
            |||
Sbjct: 2857 acc 2859

---

>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Minus

                                                                         
Query: 78    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
             |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 26572 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 26513

              
Query: 138   c 138
             |
Sbjct: 26512 c 26512

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1242 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1301

             
Query: 138  c 138
            |
Sbjct: 1302 c 1302

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2696

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1242 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1301

             
Query: 138  c 138
            |
Sbjct: 1302 c 1302

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1242 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1301

             
Query: 138  c 138
            |
Sbjct: 1302 c 1302

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2737

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1276 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1335

             
Query: 138  c 138
            |
Sbjct: 1336 c 1336

---

>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1243 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1302

             
Query: 138  c 138
            |
Sbjct: 1303 c 1303

---

>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome
          Length = 22085

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6988 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 7047

             
Query: 138  c 138
            |
Sbjct: 7048 c 7048

---

>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal
            RNA (rrnL), site-specific DNA endonuclease I-CpaI,
            site-specific DNA endonuclease I-CpaIII, site-specific
            DNA endonuclease I-CpaIV, site-specific DNA endonuclease
            I-CpaV genes
          Length = 8217

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601

             
Query: 138  c 138
            |
Sbjct: 1602 c 1602

---

>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2715

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1339 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1398

             
Query: 138  c 138
            |
Sbjct: 1399 c 1399

---

>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2920

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gaagcgagaatgttggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1568

             
Query: 138  c 138
            |
Sbjct: 1569 c 1569

---

>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Minus

                                                                         
Query: 76    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
             |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 63414 cggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatccaatgccccgaaa 63355

              
Query: 136   a 136
             |
Sbjct: 63354 a 63354

---

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Minus

                                                                         
Query: 78    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
             |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 39186 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 39127

              
Query: 138   c 138
             |
Sbjct: 39126 c 39126



 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                         
Query: 78    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
             |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20214 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 20273

              
Query: 138   c 138
             |
Sbjct: 20274 c 20274

---

>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1
          Length = 2219

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601

             
Query: 138  c 138
            |
Sbjct: 1602 c 1602

---

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                          
Query: 78     gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
              ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 189246 gaagcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 189305

               
Query: 138    c 138
              |
Sbjct: 189306 c 189306



 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                          
Query: 78     gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
              ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 150803 gaagcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 150862

               
Query: 138    c 138
              |
Sbjct: 150863 c 150863

---

>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA
          Length = 212

 Score =  105 bits (53), Expect = 3e-20
 Identities = 65/69 (94%)
 Strand = Plus / Minus

                                                                       
Query: 70  acgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 129
           ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 192 acgaatcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcc 133

                    
Query: 130 ccgaaaacc 138
            ||||||||
Sbjct: 132 tcgaaaacc 124

---

>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene
          Length = 3017

 Score =  105 bits (53), Expect = 3e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 gaagcgagaatgtaggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1414

             
Query: 138  c 138
            |
Sbjct: 1415 c 1415

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  103 bits (52), Expect = 1e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                    
Query: 83   gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1248 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1303

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720

               
Query: 136  acc 138
            |||
Sbjct: 1721 acc 1723

---

>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene,
           partial sequence
          Length = 2446

 Score =  101 bits (51), Expect = 5e-19
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                       
Query: 69  gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
           |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918

                  
Query: 129 cccgaaa 135
           |||||||
Sbjct: 919 cccgaaa 925

---

>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial
           sequence
          Length = 2385

 Score =  101 bits (51), Expect = 5e-19
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                       
Query: 69  gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
           |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918

                  
Query: 129 cccgaaa 135
           |||||||
Sbjct: 919 cccgaaa 925

---

>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome
          Length = 195867

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                          
Query: 76     cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
              |||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 193119 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgtcccgaaa 193178

                 
Query: 136    acc 138
              |||
Sbjct: 193179 acc 193181



 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                          
Query: 76     cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
              |||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 143663 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgtcccgaaa 143604

                 
Query: 136    acc 138
              |||
Sbjct: 143603 acc 143601

---

>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 6713

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2841 cggaagtgagaatgttggcttgagtaacgaaaacattggtaagaatccaatgccccgaaa 2900

               
Query: 136  acc 138
            |||
Sbjct: 2901 acc 2903

---

>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4181

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1300 cggaagtgagaatgtcggcttgagtaacgaaaacatcggtgagaatccgatgccccgaaa 1359

               
Query: 136  acc 138
            |||
Sbjct: 1360 acc 1362

---

>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2610

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgtcccgaaa 1312

               
Query: 136  acc 138
            |||
Sbjct: 1313 acc 1315

---

>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2571

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1247 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgctccgaaa 1306

               
Query: 136  acc 138
            |||
Sbjct: 1307 acc 1309



 Score = 38.2 bits (19), Expect = 6.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 15   catcggtnggggagcgttccgc 36
            ||||||| ||||||||||||||
Sbjct: 1186 catcggtaggggagcgttccgc 1207

---

>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2619

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1249 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccctgaaa 1308

               
Query: 136  acc 138
            |||
Sbjct: 1309 acc 1311

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score =  101 bits (51), Expect = 5e-19
 Identities = 105/124 (84%)
 Strand = Plus / Plus

                                                                        
Query: 15   catcggtnggggagcgttccgccttacagggaagcaaccgngaaagcggnggtcgacgaa 74
            ||||||| ||||||||||| ||  || || |||||| | | |||| | |  || ||||||
Sbjct: 4222 catcggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaa 4281

                                                                        
Query: 75   ccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 134
             | |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 4282 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaa 4341

                
Query: 135  aacc 138
            ||||
Sbjct: 4342 aacc 4345

---

>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1
          Length = 1965

 Score =  101 bits (51), Expect = 5e-19
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1300 cggaagtgagaatgtcggcttgagtaacgaaaacatcggtgagaatccgatgccccgaaa 1359

               
Query: 136  acc 138
            |||
Sbjct: 1360 acc 1362

---

>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene,
           partial sequence
          Length = 2440

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                     
Query: 78  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 923

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                          
Query: 69     gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
              |||||| |||||| ||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799

                        
Query: 129    cccgaaaacc 138
              ||||||||||
Sbjct: 137800 cccgaaaacc 137809



 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                         
Query: 69    gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
             |||||| |||||| ||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745

                       
Query: 129   cccgaaaacc 138
             ||||||||||
Sbjct: 47744 cccgaaaacc 47735

---

>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3498

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||||| |||| |||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 1312 gacgaaccagaagtgagaatgttggcttgagtaacgaaaacatcggtgagaatccgatgc 1371

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1372 cccgaaaacc 1381

---

>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CkoI genes
          Length = 5105

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                              
Query: 89   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2725 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 2774

---

>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CcaI genes
          Length = 5999

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                              
Query: 89   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 3498

---

>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 6750

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                              
Query: 89   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2747 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 2796

---

>gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2558

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1271 cggaagtgagaatgtcagcttgagtaacgaaaacattggtgagaatccagtgccccgaaa 1330

              
Query: 136  ac 137
            ||
Sbjct: 1331 ac 1332

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2886

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| | |||| |||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1242 gacgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgc 1301

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1302 cccgaaaacc 1311

---

>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1
          Length = 2668

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||||| |||| |||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 1312 gacgaaccagaagtgagaatgttggcttgagtaacgaaaacatcggtgagaatccgatgc 1371

                      
Query: 129  cccgaaaacc 138
            ||||||||||
Sbjct: 1372 cccgaaaacc 1381

---

>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2
          Length = 655

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                             
Query: 89  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 50

---

>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2
          Length = 659

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                             
Query: 89  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 50

---

>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA
            genes
          Length = 5431

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                        
Query: 69   gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
            |||||| | |||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3277 gacgaagcagaagtgagaatgtcggcttgagtaacgtaaacattggtgagaatccaatgc 3336

                  
Query: 129  cccgaa 134
            ||||||
Sbjct: 3337 cccgaa 3342

---

>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial
            sequence; and rrnL and putative site-specific DNA
            endonuclease (rrnL) genes, complete cds; chloroplast
            genes for chloroplast products
          Length = 4502

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 1290 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatggcccgaaaac 1349

             
Query: 138  c 138
            |
Sbjct: 1350 c 1350

---

>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene
          Length = 4870

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 3004 gaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 3063

             
Query: 138  c 138
            |
Sbjct: 3064 c 3064

---

>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 36.94
          Length = 4420

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                        
Query: 78   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
            |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 2935 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaac 2994

             
Query: 138  c 138
            |
Sbjct: 2995 c 2995



 Score = 38.2 bits (19), Expect = 6.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 12   atgcatcggtnggggagcgttc 33
            |||||||||| |||||||||||
Sbjct: 2870 atgcatcggtaggggagcgttc 2891

---

>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                          
Query: 78     gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
              |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 190169 gaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 190228

               
Query: 138    c 138
              |
Sbjct: 190229 c 190229



 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                          
Query: 78     gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 137
              |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 151596 gaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 151655

               
Query: 138    c 138
              |
Sbjct: 151656 c 151656

---

>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene,
           partial sequence
          Length = 2390

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                       
Query: 76  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
           |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926

---

>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene,
           partial sequence
          Length = 2389

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                       
Query: 76  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
           |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926

---

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224

---

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1450885 cggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1450944

                   
Query: 136     accc 139
               ||||
Sbjct: 1450945 accc 1450948



 Score = 87.7 bits (44), Expect = 8e-15
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||
Sbjct: 2050616 cggaagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaa 2050557

                   
Query: 136     accc 139
               ||||
Sbjct: 2050556 accc 2050553

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 2313536 cggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2313595

                   
Query: 136     accc 139
               ||||
Sbjct: 2313596 accc 2313599



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1108311 cggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1108252

                   
Query: 136     accc 139
               ||||
Sbjct: 1108251 accc 1108248

---

>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 3403

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                    
Query: 83   gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 138
            |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 gagattgtaggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1530

---

>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2604

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 1239 cggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaa 1298

                
Query: 136  accc 139
            ||||
Sbjct: 1299 accc 1302



 Score = 42.1 bits (21), Expect = 0.43
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 9    aaaatgcatcggtnggggagcgttccgc 36
            |||| |||||||| ||||||||||||||
Sbjct: 1172 aaaaagcatcggtaggggagcgttccgc 1199

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2691

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 1216 cggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaa 1275

                
Query: 136  accc 139
            ||||
Sbjct: 1276 accc 1279

---

>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2901

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaa 1311

                
Query: 136  accc 139
            ||||
Sbjct: 1312 accc 1315



 Score = 42.1 bits (21), Expect = 0.43
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 9    aaaatgcatcggtnggggagcgttccgc 36
            |||| |||||||| ||||||||||||||
Sbjct: 1185 aaaaagcatcggtaggggagcgttccgc 1212

---

>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) gene, complete sequence; and 5S
            ribosomal RNA (rrf) gene, partial sequence; chloroplast
            genes for chloroplast products
          Length = 7627

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                        
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
            |||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 5826 cggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaa 5885

                
Query: 136  accc 139
            ||||
Sbjct: 5886 accc 5889



 Score = 42.1 bits (21), Expect = 0.43
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 9    aaaatgcatcggtnggggagcgttccgc 36
            |||| |||||||| ||||||||||||||
Sbjct: 5759 aaaaagcatcggtaggggagcgttccgc 5786

---

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840



 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                           
Query: 76      cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 135
               |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520

---

>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds
          Length = 2108

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                   
Query: 76  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 131
           ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 56  cggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcccc 1

---

>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence
          Length = 3359

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                    
Query: 76   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 131
            |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1607 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1662

---

>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes,
            complete sequence; and atp6 pseudogene, partial sequence;
            mitochondrial
          Length = 10403

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1    gggatgtcaaaatgcatcggtnggggagcgttccgccttacagggaagcaaccgngaaag 60
            ||||||||||||||||||| | |||||||||||||||||| ||||||||| | |    ||
Sbjct: 2632 gggatgtcaaaatgcatcgataggggagcgttccgccttagagggaagcacctgcacgag 2573

                                                                        
Query: 61   cggnggtcgacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 120
              | ||| || ||  |||||||| ||||||||||||   ||| | |||||||||||||||
Sbjct: 2572 tagtggtggaagaggcggaagcgggaatgtcggcttttttaaggcaaacattggtgagaa 2513

                            
Query: 121  tccaatgccccgaaaa 136
            |||||||||| |||||
Sbjct: 2512 tccaatgccctgaaaa 2497

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                           
Query: 69      gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
               |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792

                      
Query: 129     cccgaaa 135
               |||||||
Sbjct: 1659793 cccgaaa 1659799



 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                           
Query: 69      gacgaaccggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 128
               |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952

                      
Query: 129     cccgaaa 135
               |||||||
Sbjct: 1048951 cccgaaa 1048945


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 526,833
Number of Sequences: 3902068
Number of extensions: 526833
Number of successful extensions: 29559
Number of sequences better than 10.0: 347
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28576
Number of HSP's gapped (non-prelim): 961
length of query: 142
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 121
effective length of database: 17,151,101,840
effective search space: 2075283322640
effective search space used: 2075283322640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

---