Clone Name | basdi19 |
---|---|
Clone Library Name | barley_pub |
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 589 bits (297), Expect = e-165 Identities = 513/585 (87%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||| |||||||||||||| || ||||||||||| Sbjct: 18 gatggtgtccggctccggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacat 77 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 78 gctcggccgcctggcctcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggt 137 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 ||| || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 138 ggtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 197 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 198 ccgcttcctccgcaagcggatgaacaccaagccctcccacggccccatccacttccgcgc 257 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcgg 346 ||| | || || ||||||||||| | ||||| ||||| ||||||||||| | | || Sbjct: 258 cccggccaagatcctctggcgcaccatccgcggtatgattccgcacaagaccgcgagggg 317 Query: 347 cgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcac 406 |||||| |||||||||||||| ||||||| |||||||||||||||||| || || | || Sbjct: 318 cgaggccgcgctcgccaggctcaaggcgtacgagggcgtcccgccgccgtacgacaggac 377 Query: 407 caagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgggtcataagta 466 |||||| ||||||||||||||||||||||||||||||||||||||||| || || | ||| Sbjct: 378 caagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcacaggta 437 Query: 467 ctgccttctcggcgagctttccaaggaggtcgggtggaactaccatgaaactatcaagga 526 |||||| |||||| |||| |||||||||||||| ||||||||| || || |||| ||| Sbjct: 438 ctgcctcctcggccagctctccaaggaggtcggatggaactacgccgacaccatcaggga 497 Query: 527 actggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggc 586 |||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 498 gctggaggaaaagagaaaggagaaggccaaggtctcctacgacaggagaaagcaactggc 557 Query: 587 caagctgcgcgtcaaggctgagaaggctgcagaggagaagctggg 631 ||||| ||||||||||| |||||||| || ||||||||| |||| Sbjct: 558 gaagctccgcgtcaaggccgagaaggcggccgaggagaagttggg 602
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 583 bits (294), Expect = e-163 Identities = 513/586 (87%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 73 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 132 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 133 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 192 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 193 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 252 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 253 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 312 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcgg 346 |||| | || || ||||||||||||| ||||||||||||||||||||||| | || Sbjct: 313 ccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaagaccaagagggg 372 Query: 347 cgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcac 406 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | || Sbjct: 373 agaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggac 432 Query: 407 caagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgggtcataagta 466 |||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 433 caagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcacaagta 492 Query: 467 ctgccttctcggcgagctttccaaggaggtcgggtggaactaccatgaaactatcaagga 526 |||||| |||||| |||| ||||||||||| || ||||||||| |||| || |||| ||| Sbjct: 493 ctgcctcctcggccagctctccaaggaggttggctggaactactatgacaccatcaggga 552 Query: 527 actggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggc 586 || ||||||||||||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 553 gcttgaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggc 612 Query: 587 caagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggt 632 |||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 613 gaagctgcgtgtcaaggctgagaaggcagccgaggagaagctgggt 658
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 583 bits (294), Expect = e-163 Identities = 513/586 (87%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 83 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 142 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 143 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 202 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 203 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 262 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 263 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 322 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcgg 346 |||| | || || ||||||||||||| ||||||||||||||||||||||| | || Sbjct: 323 ccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaagaccaagagggg 382 Query: 347 cgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcac 406 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | || Sbjct: 383 agaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggac 442 Query: 407 caagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgggtcataagta 466 |||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 443 caagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcacaagta 502 Query: 467 ctgccttctcggcgagctttccaaggaggtcgggtggaactaccatgaaactatcaagga 526 |||||| |||||| |||| ||||||||||| || ||||||||| |||| || |||| ||| Sbjct: 503 ctgcctcctcggccagctctccaaggaggttggctggaactactatgacaccatcaggga 562 Query: 527 actggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggc 586 || ||||||||||||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 563 gcttgaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggc 622 Query: 587 caagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggt 632 |||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 623 gaagctgcgtgtcaaggctgagaaggcagccgaggagaagctgggt 668
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 583 bits (294), Expect = e-163 Identities = 513/586 (87%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 83 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 142 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 143 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 202 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 203 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 262 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 263 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 322 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcgg 346 |||| | || || ||||||||||||| ||||||||||||||||||||||| | || Sbjct: 323 ccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaagaccaagagggg 382 Query: 347 cgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcac 406 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | || Sbjct: 383 agaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggac 442 Query: 407 caagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgggtcataagta 466 |||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 443 caagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcacaagta 502 Query: 467 ctgccttctcggcgagctttccaaggaggtcgggtggaactaccatgaaactatcaagga 526 |||||| |||||| |||| ||||||||||| || ||||||||| |||| || |||| ||| Sbjct: 503 ctgcctcctcggccagctctccaaggaggttggctggaactactatgacaccatcaggga 562 Query: 527 actggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggc 586 || ||||||||||||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 563 gcttgaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggc 622 Query: 587 caagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggt 632 |||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 623 gaagctgcgtgtcaaggctgagaaggcagccgaggagaagctgggt 668
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 519 bits (262), Expect = e-144 Identities = 481/554 (86%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 118 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 177 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 178 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 237 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 238 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 297 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 298 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 357 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 358 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 417 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggtt 440 |||||||| || || || || ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 418 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 477 Query: 441 ctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggtcggg 500 || | || ||||| || || ||||||||||| |||||| |||| |||||||||||||| Sbjct: 478 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 537 Query: 501 tggaactaccatgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtc 560 ||||||||||| || || |||| |||| ||||||||||||| ||||||||||| ||||| Sbjct: 538 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 597 Query: 561 tcttacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagag 620 | ||||| |||||||||||| | | | ||| || |||||||||||||| ||||| ||| Sbjct: 598 gcatacgagaggaggaagcaattaacaaggcttcgtgtcaaggctgagaaagctgctgag 657 Query: 621 gagaagctgggttc 634 |||||||||||||| Sbjct: 658 gagaagctgggttc 671
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 519 bits (262), Expect = e-144 Identities = 481/554 (86%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 122 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 181 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 182 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 241 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 242 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 301 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 302 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 361 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 362 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 421 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggtt 440 |||||||| || || || || ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 422 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 481 Query: 441 ctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggtcggg 500 || | || ||||| || || ||||||||||| |||||| |||| |||||||||||||| Sbjct: 482 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 541 Query: 501 tggaactaccatgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtc 560 ||||||||||| || || |||| |||| ||||||||||||| ||||||||||| ||||| Sbjct: 542 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 601 Query: 561 tcttacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagag 620 | ||||| |||||||||||| | | | ||| || |||||||||||||| ||||| ||| Sbjct: 602 gcatacgagaggaggaagcaattaacaaggcttcgtgtcaaggctgagaaagctgctgag 661 Query: 621 gagaagctgggttc 634 |||||||||||||| Sbjct: 662 gagaagctgggttc 675
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 519 bits (262), Expect = e-144 Identities = 481/554 (86%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 118 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 177 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 178 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 237 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 238 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 297 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 298 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 357 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 358 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 417 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggtt 440 |||||||| || || || || ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 418 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 477 Query: 441 ctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggtcggg 500 || | || ||||| || || ||||||||||| |||||| |||| |||||||||||||| Sbjct: 478 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 537 Query: 501 tggaactaccatgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtc 560 ||||||||||| || || |||| |||| ||||||||||||| ||||||||||| ||||| Sbjct: 538 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 597 Query: 561 tcttacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagag 620 | ||||| |||||||||||| | | | ||| || |||||||||||||| ||||| ||| Sbjct: 598 gcatacgagaggaggaagcaattaacaaggcttcgtgtcaaggctgagaaagctgctgag 657 Query: 621 gagaagctgggttc 634 |||||||||||||| Sbjct: 658 gagaagctgggttc 671
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 519 bits (262), Expect = e-144 Identities = 481/554 (86%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 122 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 181 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 182 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 241 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 242 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 301 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 302 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 361 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 362 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 421 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggtt 440 |||||||| || || || || ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 422 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 481 Query: 441 ctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggtcggg 500 || | || ||||| || || ||||||||||| |||||| |||| |||||||||||||| Sbjct: 482 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 541 Query: 501 tggaactaccatgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtc 560 ||||||||||| || || |||| |||| ||||||||||||| ||||||||||| ||||| Sbjct: 542 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 601 Query: 561 tcttacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagag 620 | ||||| |||||||||||| | | | ||| || |||||||||||||| ||||| ||| Sbjct: 602 gcatacgagaggaggaagcaattaacaaggcttcgtgtcaaggctgagaaagctgctgag 661 Query: 621 gagaagctgggttc 634 |||||||||||||| Sbjct: 662 gagaagctgggttc 675
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 468 bits (236), Expect = e-128 Identities = 470/548 (85%) Strand = Plus / Plus Query: 84 gtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctg 143 |||||||| |||||||||||||||||||| || || | |||||| | |||||||||||| Sbjct: 96 gtggtggacgcgcgccaccacatgctgggccgtctctcctcgatcatagccaaggagctg 155 Query: 144 ctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctg 203 ||||| |||||| ||||| || || || ||||||||||| ||||| || ||||| || Sbjct: 156 ctcaatgggcagaaggtggtcgtcgtccgctgcgaggagatctgcatgtcgggcggcctc 215 Query: 204 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcg 263 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcc 275 Query: 264 cacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatg 323 ||||| ||||||||||||||||||||| | || || | ||||||||| | ||||| ||| Sbjct: 276 cacgggcccatccacttccgcgcccccgccaagatcctgtggcgcaccatccgcgggatg 335 Query: 324 atcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggc 383 || ||||||||||| | || ||||| || || || ||||| ||| ||| ||||||| Sbjct: 336 attccgcacaagaccaagaggggggaggcggctctggcgaggctcaagacgtacgagggc 395 Query: 384 gtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctg 443 ||||||||||| || || |||||||||||||||||||| ||||| || ||||||||| Sbjct: 396 gtcccgccgccgtacgacaagaccaagcgtatggtcatccctgacgctcttaaggttctg 455 Query: 444 aggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggtcgggtgg 503 ||||| ||||| || || ||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 456 aggctacagcctggacacaagtactgcctcctcggcgagctctctaaggaggtcgggtgg 515 Query: 504 aactaccatgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtctct 563 ||||||||||| || |||| |||||| ||||||||||||||||||||||||||||| | Sbjct: 516 aactaccatgacaccatcagggaacttgaggagaagaggaaggagaaggccaaggttgcc 575 Query: 564 tacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggag 623 ||||| |||| ||||||| ||||||||||||| |||||||| |||||||| || |||||| Sbjct: 576 tacgagaggaagaagcaattggccaagctgcgtgtcaaggccgagaaggcagccgaggag 635 Query: 624 aagctggg 631 ||| |||| Sbjct: 636 aagttggg 643
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 375 bits (189), Expect = e-100 Identities = 315/357 (88%) Strand = Plus / Minus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 524644 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 524585 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 524584 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 524525 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 524524 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 524465 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 524464 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 524405 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 524404 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 524345 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 |||||||| || || || || ||||||||||| |||||| |||||||||| |||||| Sbjct: 524344 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaag 524288 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 523 aggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaac 582 ||||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| Sbjct: 523065 aggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaat 523006 Query: 583 tggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttc 634 | | | ||| || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 523005 taacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttc 522954 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 462 aagtactgccttctcggcgagctttccaaggaggtcgggtggaactacca 511 ||||||||||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 524187 aagtactgcctcctcggccagctctccaaggaggtcggctggaactacca 524138
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 375 bits (189), Expect = e-100 Identities = 315/357 (88%) Strand = Plus / Minus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 126808 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 126749 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 126748 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 126689 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126688 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 126629 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 126628 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 126569 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 126568 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 126509 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 |||||||| || || || || ||||||||||| |||||| |||||||||| |||||| Sbjct: 126508 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaag 126452 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 523 aggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaac 582 ||||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| Sbjct: 125229 aggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaat 125170 Query: 583 tggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttc 634 | | | ||| || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 125169 taacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttc 125118 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 462 aagtactgccttctcggcgagctttccaaggaggtcgggtggaactacca 511 ||||||||||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 126351 aagtactgcctcctcggccagctctccaaggaggtcggctggaactacca 126302
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 375 bits (189), Expect = e-100 Identities = 315/357 (88%) Strand = Plus / Minus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| ||||| |||||||||||||| || || |||||| | ||||| |||||| Sbjct: 78556 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 78497 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 78496 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 78437 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 78436 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 78377 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || || ||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 78376 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 78317 Query: 321 atgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgag 380 |||||||| |||||||| |||||||||||||| || ||||||| || ||||| ||||| Sbjct: 78316 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 78257 Query: 381 ggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 |||||||| || || || || ||||||||||| |||||| |||||||||| |||||| Sbjct: 78256 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaag 78200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 523 aggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaac 582 ||||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| Sbjct: 76977 aggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaat 76918 Query: 583 tggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttc 634 | | | ||| || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 76917 taacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttc 76866 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 462 aagtactgccttctcggcgagctttccaaggaggtcgggtggaactacca 511 ||||||||||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 78099 aagtactgcctcctcggccagctctccaaggaggtcggctggaactacca 78050
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 343 bits (173), Expect = 4e-91 Identities = 437/525 (83%) Strand = Plus / Plus Query: 84 gtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctg 143 |||||||| |||||||||||||||||||| ||||| |||| || | |||||||| ||| Sbjct: 85 gtggtggacgcgcgccaccacatgctgggccgcctgtcgtccattattgccaaggaactg 144 Query: 144 ctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctg 203 ||||| |||||| ||||| || || || ||||||||||| || || || || ||||| Sbjct: 145 ctcaatgggcagaaggtggtcgtcgtccgctgcgaggagatctgtatgtcgggtgggctc 204 Query: 204 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcg 263 || || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 205 gtacgccagaagatgaagtacctccgctttctccgcaagcggatgaacaccaagccatcc 264 Query: 264 cacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatg 323 || || |||||||||||||||||||| || || || | ||||||||| | ||||| ||| Sbjct: 265 catgggcccatccacttccgcgccccgtccaagatcctgtggcgcaccatccgcgggatg 324 Query: 324 atcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggc 383 || ||||||||||| | || ||||| || || || ||||| ||| ||| ||||||| Sbjct: 325 attccgcacaagaccaagaggggggaggcggctctggcgaggctcaagacgtacgagggc 384 Query: 384 gtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctg 443 ||||||||||| || || |||||||| |||||||||| ||||| || ||||||||| Sbjct: 385 gtcccgccgccgtacgacaagaccaagcgcctggtcatccctgacgctcttaaggttctg 444 Query: 444 aggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggtcgggtgg 503 |||||||| || || || ||||||||||| || || |||||||| ||||||||||| ||| Sbjct: 445 aggctgcaaccaggacacaagtactgcctccttggggagctttctaaggaggtcggatgg 504 Query: 504 aactaccatgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtctct 563 ||||||||||| || |||| ||| || ||||||||||||||||||||||| ||||| | Sbjct: 505 aactaccatgacaccatcagggagcttgaggagaagaggaaggagaaggctaaggtggcc 564 Query: 564 tacgacaggaggaagcaactggccaagctgcgcgtcaaggctgag 608 || || ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 565 tatgagaggaggaagcagctggccaagctgcgcctaaaggctgag 609
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 280 bits (141), Expect = 5e-72 Identities = 240/273 (87%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 30899478 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 30899537 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 30899538 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 30899597 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30899598 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30899657 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30899658 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 30899717 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 30899718 ccccgccaagatcctctggcgcaccgtccgcgg 30899750 Score = 232 bits (117), Expect = 1e-57 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 30886829 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 30886770 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 30886769 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 30886710 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30886709 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30886650 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30886649 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 30886591 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 30886590 ccccgccaagatcctctggcgcaccgtccgcgg 30886558 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 531 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 590 ||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||| Sbjct: 30900988 gaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggcgaag 30901047 Query: 591 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggt 632 ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 30901048 ctgcgtgtcaaggctgagaaggcagccgaggagaagctgggt 30901089 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30899848 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30899907 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||||||| |||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30899908 agggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30899966 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 30900058 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30900117 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 30900118 tggctggaactactatga 30900135 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 30886224 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30886165 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 30886164 tggctggaactactatga 30886147 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30886444 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30886385 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30886384 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30886326 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaaggc 553 ||||||||||||||||| |||||| Sbjct: 34372697 ggaggagaagaggaaggtgaaggc 34372674 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccggaggaagagaggaaggg 29 |||||||||||||||||||| Sbjct: 23602910 ccggaggaagagaggaaggg 23602929
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 280 bits (141), Expect = 5e-72 Identities = 240/273 (87%) Strand = Plus / Minus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 43612 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 43553 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 43552 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 43493 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 43492 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 43433 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 43432 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 43373 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 43372 ccccgccaagatcctctggcgcaccgtccgcgg 43340 Score = 232 bits (117), Expect = 1e-57 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 56261 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 56320 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 56321 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 56380 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 56381 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 56440 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 56441 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 56499 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 56500 ccccgccaagatcctctggcgcaccgtccgcgg 56532 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 531 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 590 ||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||| Sbjct: 42102 gaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggcgaag 42043 Query: 591 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggt 632 ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 42042 ctgcgtgtcaaggctgagaaggcagccgaggagaagctgggt 42001 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 43242 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 43183 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||||||| |||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 43182 agggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 43124 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 56866 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 56925 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 56926 tggctggaactactatga 56943 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 43032 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 42973 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 42972 tggctggaactactatga 42955 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 56646 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 56705 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 56706 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 56764
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 280 bits (141), Expect = 5e-72 Identities = 240/273 (87%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||| Sbjct: 30990001 gatggtgtccggctccggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacat 30990060 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| || ||||| || || ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 30990061 gctcggccgcctggcctccatcatcgccaaggagctcctcaacgggcagcgcgtggtggt 30990120 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30990121 cgtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30990180 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30990181 ccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatccacttccgctc 30990240 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 30990241 ccccgccaagatcctctggcgcaccgtccgcgg 30990273 Score = 232 bits (117), Expect = 1e-57 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 30977352 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 30977293 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 30977292 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 30977233 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 30977232 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 30977173 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 30977172 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 30977114 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 30977113 ccccgccaagatcctctggcgcaccgtccgcgg 30977081 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 531 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 590 ||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||| Sbjct: 30991511 gaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggcgaag 30991570 Query: 591 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggt 632 ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 30991571 ctgcgtgtcaaggctgagaaggcagccgaggagaagctgggt 30991612 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30990371 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30990430 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||||||| |||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30990431 agggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30990489 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 30990581 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30990640 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 30990641 tggctggaactactatga 30990658 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 30976747 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30976688 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 30976687 tggctggaactactatga 30976670 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30976967 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30976908 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30976907 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30976849 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaaggc 553 ||||||||||||||||| |||||| Sbjct: 34463169 ggaggagaagaggaaggtgaaggc 34463146 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccggaggaagagaggaaggg 29 |||||||||||||||||||| Sbjct: 23595938 ccggaggaagagaggaaggg 23595957
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 242 bits (122), Expect = 1e-60 Identities = 221/254 (87%) Strand = Plus / Plus Query: 84 gtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctg 143 |||||||| |||||||||||||||||||| || || | |||||| | |||||||||||| Sbjct: 584 gtggtggacgcgcgccaccacatgctgggccgtctctcctcgatcatagccaaggagctg 643 Query: 144 ctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctg 203 ||||| |||||| |||||||| || || ||||||||||| ||||| || ||||| || Sbjct: 644 ctcaatgggcagaaggtggtggtcgtccgctgcgaggagatctgcatgtcgggcggcctc 703 Query: 204 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcg 263 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcc 763 Query: 264 cacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatg 323 ||||| |||||||||||||||||||| | || || | ||||||||| | ||||| ||| Sbjct: 764 cacggccccatccacttccgcgccccggccaagatcctgtggcgcaccatccgcgggatg 823 Query: 324 atcccgcacaagac 337 || ||||||||||| Sbjct: 824 attccgcacaagac 837 Score = 155 bits (78), Expect = 2e-34 Identities = 144/166 (86%) Strand = Plus / Plus Query: 363 aggctgaaggcgttcgagggcgtcccgccgccttatgatcgcaccaagcgtatggtcatc 422 ||||| ||| ||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 863 aggctcaagacgtacgagggcgtcccgccgccgtacgacaagaccaagcgtatggtcatc 922 Query: 423 cccgacgcgctcaaggttctgaggctgcagccgggtcataagtactgccttctcggcgag 482 || ||||| || |||||||||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 923 cctgacgctcttaaggttctgaggctacagcctggacacaagtactgcctcctcggcgag 982 Query: 483 ctttccaaggaggtcgggtggaactaccatgaaactatcaaggaac 528 || || |||||||||||||||||||||||||| || |||| ||||| Sbjct: 983 ctctctaaggaggtcgggtggaactaccatgacaccatcagggaac 1028 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 564 tacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggag 623 ||||| |||| ||||||| ||||||||||||| |||||||| |||||||| || |||||| Sbjct: 1064 tacgagaggaagaagcaattggccaagctgcgtgtcaaggccgagaaggcagccgaggag 1123 Query: 624 aagctggg 631 ||| |||| Sbjct: 1124 aagttggg 1131
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 232 bits (117), Expect = 1e-57 Identities = 235/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 54287 gatggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacat 54346 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct: 54347 gctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtggt 54406 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 54407 cgtccgctgctaggagatctgcatgtccggcggcctcgtccgccagaagatgaagtacct 54466 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||| | Sbjct: 54467 ccgcttcctccg-aagaggatgaacaccaagccctcccatggccccatccacttccgctc 54525 Query: 287 cccctcgaaaattttctggcgcaccgtgcgcgg 319 |||| | || || ||||||||||||| ||||| Sbjct: 54526 ccccgccaagatcctctggcgcaccgtccgcgg 54558 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 54892 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 54951 Query: 497 cgggtggaactaccatga 514 || ||||||||| |||| Sbjct: 54952 tggctggaactactatga 54969 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 319 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 378 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 54672 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 54731 Query: 379 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 437 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 54732 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 54790
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 220 bits (111), Expect = 4e-54 Identities = 231/271 (85%) Strand = Plus / Plus Query: 244 ggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttct 303 |||||||||||||||| || || || ||||||||||||||| ||||| | || || ||| Sbjct: 119 ggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctct 178 Query: 304 ggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 363 |||||||||| ||||||||||||||||||||||| | || ||||| ||||| || | Sbjct: 179 ggcgcaccgtccgcggcatgatcccgcacaagaccaagaggggagaggcggcgctggcaa 238 Query: 364 ggctgaaggcgttcgagggcgtcccgccgccttatgatcgcaccaagcgtatggtcatcc 423 |||||||||||| ||||| ||| ||||||| || || | |||||||| |||||||||| Sbjct: 239 ggctgaaggcgtacgaggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatcc 298 Query: 424 ccgacgcgctcaaggttctgaggctgcagccgggtcataagtactgccttctcggcgagc 483 ||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||| Sbjct: 299 ccgacgcgctcaaggttctgaggctgcagcctgggcacaagtactgcctcctcggccagc 358 Query: 484 tttccaaggaggtcgggtggaactaccatga 514 | ||||||||||| || ||||||||| |||| Sbjct: 359 tctccaaggaggttggctggaactactatga 389 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 48 atggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacatg 107 ||||||||||||||||| |||| ||||| ||||| |||||||| ||||||||||||||| Sbjct: 1 atggtgtccggctccggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatg 60 Query: 108 ctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtg 164 || | ||||| || || ||| | ||||||||||| ||||||||| ||||||||||| Sbjct: 61 ctcagccgcctggcttccatcatcgccaaggagctcctcaacgggaagcgcgtggtg 117
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 206 bits (104), Expect = 6e-50 Identities = 209/244 (85%) Strand = Plus / Plus Query: 47 gatggtgtccggctccggtgtgtccgcgcgtcgcgtggtggtggatgcgcgccaccacat 106 |||||| ||||||||||| |||| |||| ||| | |||||||| |||||||||||||| Sbjct: 68879 gatggtttccggctccggcgtgtgcgcgaagcgcatcgtggtggacgcgcgccaccacat 68938 Query: 107 gctgggacgccttgcgtcgatcgtggccaaggagctgctcaacgggcagcgcgtggtggt 166 ||| |||||||| ||||||| | |||||||||||||| || |||||| ||||| || Sbjct: 68939 gctcggacgcctgtcgtcgattatcgccaaggagctgctgaatgggcagaaggtggtcgt 68998 Query: 167 ggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaagtacct 226 || || ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| Sbjct: 68999 cgtccgctgcgaggagatctgcatgtcgggcggcctcgtccgccagaagatgaagtacct 69058 Query: 227 ccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttccgcgc 286 |||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 69059 ccgcttcctccgcaagaggatgaacaccaagccgtctcacggccccattcacttccgtgc 69118 Query: 287 cccc 290 |||| Sbjct: 69119 cccc 69122 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 531 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 590 ||||||||||||||||||||||||||||| | || || ||||||||||||||||||||| Sbjct: 70340 gaggagaagaggaaggagaaggccaaggttgcctatgagaggaggaagcaactggccaag 70399 Query: 591 ctgcgcgtcaaggctgagaaggctgcagaggagaagctggg 631 ||||| ||||||||||||||| | || |||||||||||||| Sbjct: 70400 ctgcgtgtcaaggctgagaagacagccgaggagaagctggg 70440 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| ||||||||||| || |||||||| Sbjct: 69466 ggttctgaggctgcagcctgggcacaagtactgcctcctcggcgagctctctaaggaggt 69525 Query: 497 cgggtggaactaccatga 514 ||| |||||||||||||| Sbjct: 69526 cggatggaactaccatga 69543
>dbj|AK066603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071H21, full insert sequence Length = 2212 Score = 170 bits (86), Expect = 4e-39 Identities = 143/162 (88%) Strand = Plus / Plus Query: 348 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 407 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 415 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 474 Query: 408 aagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgggtcataagtac 467 ||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 475 aagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcacaagtac 534 Query: 468 tgccttctcggcgagctttccaaggaggtcgggtggaactac 509 ||||| |||||| |||| ||||||||||| || ||||||||| Sbjct: 535 tgcctcctcggccagctctccaaggaggttggctggaactac 576
>gb|DQ099054.1| Arachis stenosperma clone AS1RN3B12 microsatellite sequence Length = 758 Score = 121 bits (61), Expect = 3e-24 Identities = 208/257 (80%) Strand = Plus / Minus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| || | ||||||||||| || || || |||||||| ||||| |||||| Sbjct: 641 gtggtggtggacgcaaggcaccacatgcttggtcgtctggcgtcgatagtggcgaaggag 582 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || ||||| || ||| || ||||||||| ||||||||||||| ||||| ||||| ||| Sbjct: 581 cttctcaatggtcagaaggttgtggtggttaggtgcgaggagatctgcatttccggtggg 522 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || || | ||||| |||||||| | | |||||||| ||| |||||||||| ||||| Sbjct: 521 ctcgtgagacagaaaatgaagtatatgaggttcctccgtaagaggatgaacactaagccc 462 Query: 261 tcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggc 320 || || ||||||||||| ||||| || || || || || |||||||||||||| || || Sbjct: 461 tctcatggtcccatccatttccgtgctccttctaagatcttctggcgcaccgttcgaggt 402 Query: 321 atgatcccgcacaagac 337 ||||| || |||||||| Sbjct: 401 atgataccacacaagac 385 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 603 gctgagaaggctgcagaggagaagctgggttc 634 |||||||||| ||| ||||||||||| ||||| Sbjct: 119 gctgagaaggttgctgaggagaagcttggttc 88
>gb|AF521144.1| Kandelia candel 60S ribosomal protein mRNA, partial cds Length = 236 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||||||||| |||||||||||||||||||| | || |||||||| | ||||| ||| Sbjct: 13 gtggtggtggacgcgcgccaccacatgctggggaggctcgcgtcgataatagccaaagag 72 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 ||||| ||||| ||| ||||||||||| ||||||| ||||| ||| | || || || Sbjct: 73 ctgctgaacggtcagaaagtggtggtggtgaggtgcgaagagatatgcttgtcgggaggc 132 Query: 201 ctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccg 260 || || | ||||||||||||||||| | ||||| ||||| || |||||||||||||| Sbjct: 133 cttgtgaggcagaagatgaagtacctgaggttccttcgcaaacgcatgaacaccaagcct 192 Query: 261 tcgcacggtcccatccacttccgcgccccctc 292 || ||||| |||||||| |||||||| ||||| Sbjct: 193 tctcacggacccatccatttccgcgctccctc 224
>ref|NM_111591.2| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.1 mRNA, complete cds Length = 881 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 95 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 154 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 155 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 214 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 215 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 274 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 275 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 334 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 335 ggtatgattccacacaagac 354
>ref|NM_001035577.1| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.2 mRNA, complete cds Length = 893 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 104 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 163 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 164 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 223 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 224 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 283 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 284 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 343 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 344 ggtatgattccacacaagac 363
>gb|AY114589.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110) mRNA, complete cds Length = 667 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 31 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 90 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 91 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 150 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 151 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 210 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 211 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 270 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 271 ggtatgattccacacaagac 290
>gb|AY062793.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110; T1B9.24) mRNA, complete cds Length = 811 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 94 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 153 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 154 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 213 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 214 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 273 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 274 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 333 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 334 ggtatgattccacacaagac 353
>gb|AY057551.1| Arabidopsis thaliana AT3g07110/T1B9_24 mRNA, complete cds Length = 831 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 94 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 153 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 154 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 213 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 214 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 273 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 274 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 333 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 334 ggtatgattccacacaagac 353
>gb|AF325041.2|AF325041 Arabidopsis thaliana AT3g07110 (AT3g07110/T1B9_24) mRNA, complete cds Length = 829 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 94 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 153 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 154 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 213 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 214 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 273 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 274 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 333 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 334 ggtatgattccacacaagac 353
>emb|BX822336.1|CNS0A5ZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 788 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 78 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 137 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 138 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 197 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 198 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 257 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 258 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 317 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 318 ggtatgattccacacaagac 337
>emb|BX824368.1|CNS0A5OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 103 bits (52), Expect = 7e-19 Identities = 208/260 (80%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 72 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 131 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 132 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 191 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 192 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 251 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 252 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 311 Query: 318 ggcatgatcccgcacaagac 337 || ||||| || |||||||| Sbjct: 312 ggtatgattccacacaagac 331
>emb|BX822519.1|CNS0A5UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 162 gtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaag 221 ||||| || |||||||||||||| || |||||||||| || || ||||||||||||||| Sbjct: 140 gtggttgtccggtgcgaggagatttgtctctccggcggacttgttcgtcagaagatgaag 199 Query: 222 tacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttc 281 ||| | | || ||||| ||||| |||||||| || || || ||||| || || |||||| Sbjct: 200 tacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcacttc 259 Query: 282 cgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 337 || || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 260 cgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 315
>emb|BX822098.1|CNS0A5TD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 162 gtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcagaagatgaag 221 ||||| || |||||||||||||| || |||||||||| || || ||||||||||||||| Sbjct: 30 gtggttgtccggtgcgaggagatttgtctctccggcggacttgttcgtcagaagatgaag 89 Query: 222 tacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccacttc 281 ||| | | || ||||| ||||| |||||||| || || || ||||| || || |||||| Sbjct: 90 tacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcacttc 149 Query: 282 cgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 337 || || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 150 cgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 205
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 348 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 407 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 110168 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 110227 Query: 408 aagcgtatggtcatccccgacgcgctcaag 437 ||||| |||||||||||||||||||||||| Sbjct: 110228 aagcgcatggtcatccccgacgcgctcaag 110257 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 110358 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 110417 Query: 497 cgggtggaactac 509 || ||||||||| Sbjct: 110418 tggctggaactac 110430
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 348 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 407 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 14757 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 14816 Query: 408 aagcgtatggtcatccccgacgcgctcaag 437 ||||| |||||||||||||||||||||||| Sbjct: 14817 aagcgcatggtcatccccgacgcgctcaag 14846 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 14947 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 15006 Query: 497 cgggtggaactac 509 || ||||||||| Sbjct: 15007 tggctggaactac 15019
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 91.7 bits (46), Expect = 3e-15 Identities = 193/242 (79%) Strand = Plus / Minus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 ||||||||||| ||||| || ||||||||||| || ||| | || ||| | || || ||| Sbjct: 82661 cgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaag 82602 Query: 138 gagctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggc 197 || |||||||| || ||| | ||||| || |||||||||||||| || |||||||| Sbjct: 82601 gatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccggc 82542 Query: 198 gggctggtccgtcagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaag 257 || || || |||||||||||||||||| | | || ||||| ||||| |||||||| || Sbjct: 82541 ggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaaa 82482 Query: 258 ccgtcgcacggtcccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgc 317 || || ||||| || || |||||||| || ||||| || || |||||||| ||||| ||| Sbjct: 82481 ccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcgc 82422 Query: 318 gg 319 || Sbjct: 82421 gg 82420
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 348 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 407 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 12942832 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 12942891 Query: 408 aagcgtatggtcatccccgacgcgctcaag 437 ||||| |||||||||||||||||||||||| Sbjct: 12942892 aagcgcatggtcatccccgacgcgctcaag 12942921 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 12943022 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 12943081 Query: 497 cgggtggaactac 509 || ||||||||| Sbjct: 12943082 tggctggaactac 12943094
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 348 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 407 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 13023039 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 13023098 Query: 408 aagcgtatggtcatccccgacgcgctcaag 437 ||||| |||||||||||||||||||||||| Sbjct: 13023099 aagcgcatggtcatccccgacgcgctcaag 13023128 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 437 ggttctgaggctgcagccgggtcataagtactgccttctcggcgagctttccaaggaggt 496 |||||||||||||||||| || || ||||||||||| |||||| |||| ||||||||||| Sbjct: 13023229 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 13023288 Query: 497 cgggtggaactac 509 || ||||||||| Sbjct: 13023289 tggctggaactac 13023301
>gb|AF051212.1|AF051212 Picea mariana probable 60s ribosomal protein L13a (Sb16) mRNA, complete cds Length = 918 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggag 140 ||||| ||||||||||||||||||||||| || ||||| || || ||| ||||||||||| Sbjct: 84 gtggttgtggatgcgcgccaccacatgcttggccgcctcgcctctatcttggccaaggag 143 Query: 141 ctgctcaacgggcagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcggg 200 || ||| | || ||||| ||||| ||||| || || || ||||| ||||| || || || Sbjct: 144 cttctccatggccagcgagtggttgtggtgcgttgtgaagagatatgcatgtctggtgga 203 Query: 201 ctggtccgtcagaagatgaa 220 || || |||||||||||||| Sbjct: 204 cttgttcgtcagaagatgaa 223
>ref|NM_124253.2| Arabidopsis thaliana structural constituent of ribosome AT5G48760 mRNA, complete cds Length = 834 Score = 67.9 bits (34), Expect = 4e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 93 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 152 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 82 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 141 Query: 153 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 212 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 142 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 201 Query: 213 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 272 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 202 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 261 Query: 273 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 332 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 262 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 321 Query: 333 aagacg 338 |||||| Sbjct: 322 aagacg 327
>gb|AY090359.1| Arabidopsis thaliana AT5g48760/K24G6_9 mRNA, complete cds Length = 677 Score = 67.9 bits (34), Expect = 4e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 93 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 152 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 75 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 134 Query: 153 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 212 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 135 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 194 Query: 213 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 272 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 195 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 254 Query: 273 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 332 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 255 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 314 Query: 333 aagacg 338 |||||| Sbjct: 315 aagacg 320
>gb|AY088191.1| Arabidopsis thaliana clone 4275 mRNA, complete sequence Length = 814 Score = 67.9 bits (34), Expect = 4e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 93 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 152 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 75 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 134 Query: 153 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 212 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 135 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 194 Query: 213 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 272 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 195 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 254 Query: 273 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 332 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 255 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 314 Query: 333 aagacg 338 |||||| Sbjct: 315 aagacg 320
>gb|AY122902.1| Arabidopsis thaliana At5g48760/K24G6_9 mRNA, complete cds Length = 621 Score = 67.9 bits (34), Expect = 4e-08 Identities = 193/246 (78%) Strand = Plus / Plus Query: 93 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 152 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 46 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 105 Query: 153 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 212 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 106 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 165 Query: 213 aagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtccc 272 || ||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct: 166 aaaatgaagtacatgaggtttcttcgcaaacgtatgaacactaaaccttctcatggacct 225 Query: 273 atccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcac 332 || |||||||| || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 226 attcacttccgtgctccttccaaaatcttctggcgtactgttcgcggtatgattccacac 285 Query: 333 aagacg 338 |||||| Sbjct: 286 aagacg 291
>gb|AY498745.1| Capsicum annuum 60S ribosomal protein L13a (RpL13a) mRNA, complete cds Length = 797 Score = 65.9 bits (33), Expect = 2e-07 Identities = 94/113 (83%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 516 actatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggagg 575 ||||||||||| || ||||| ||||| ||||||| ||| ||||| |||| || ||||| Sbjct: 535 actatcaaggagctcgaggacaagagaaaggagagagcccaggtcacttatgagaggaga 594 Query: 576 aagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagct 628 ||||| |||||||| || | || |||||||| |||||||| ||||||||||| Sbjct: 595 aagcagctggccaaactcagggttaaggctga-aaggctgccgaggagaagct 646
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 387 ctggaggagaagaggaaggagaaggccaag 416 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||| ||||||||||||||||||| Sbjct: 169 ttcctctgcaagcggatgaacaccaa 194
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 2854 ctggaggagaagaggaaggagaaggccaag 2883
>ref|XM_514152.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC457684), mRNA Length = 663 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 466 ctggaggagaagaggaaggagaaggccaag 495
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 81677 ctggaggagaagaggaaggagaaggccaag 81648
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 95013 ctggaggagaagaggaaggagaaggccaag 95042
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 188756 ctggaggagaagaggaaggagaaggccaag 188727
>gb|AC003072.1|AC003072 Human BAC clone CTA-963H5 from 22q12.1-qter, complete sequence Length = 39401 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||||||| Sbjct: 2109 ctggaggagaagaggaaggagaaggccaag 2080
>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239, complete sequence Length = 106506 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 81 gtggtggtggatgcgcgccaccacatgctgggacgcct 118 ||||||||||||||||||||||||||| |||| ||||| Sbjct: 83567 gtggtggtggatgcgcgccaccacatgttgggtcgcct 83604
>emb|AJ223363.1|LLAJ3363 Lupinus luteus mRNA for ribosomal protein L13a Length = 766 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 78 cgcgtggtggtggatgcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaag 137 |||||||| || || ||||||||||||||||| || || ||||| || |||||||| ||| Sbjct: 57 cgcgtggtagtcgacgcgcgccaccacatgcttggtcgtcttgcttcaatcgtggcaaag 116 Query: 138 gagct 142 ||||| Sbjct: 117 gagct 121
>gb|U18488.1|STU18488 Salmo trutta transplantation antigen mRNA, partial cds Length = 621 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||||||| Sbjct: 427 tggaggagaagaggaaggagaaggccaag 455
>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205952 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 94900 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 94939 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 95211 ctggaggagaagaggaaagagaaagccaag 95240
>ref|XM_944672.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648462), mRNA Length = 1590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1426 ctggaggagaagaggaaagagaaagccaag 1455
>ref|XM_944670.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648462), mRNA Length = 1547 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1040 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1079 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1351 ctggaggagaagaggaaagagaaagccaag 1380
>ref|XM_940589.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648462), mRNA Length = 1642 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1426 ctggaggagaagaggaaagagaaagccaag 1455
>ref|XM_944666.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648462), mRNA Length = 1542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1360 ctggaggagaagaggaaagagaaagccaag 1389
>ref|XM_933780.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC441632), mRNA Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1425 ctggaggagaagaggaaagagaaagccaag 1454
>ref|XM_497335.2| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC441632), mRNA Length = 1546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1039 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1078 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1350 ctggaggagaagaggaaagagaaagccaag 1379
>ref|XM_929566.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC441632), mRNA Length = 1641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1425 ctggaggagaagaggaaagagaaagccaag 1454
>ref|XM_933775.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA Length = 1541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1359 ctggaggagaagaggaaagagaaagccaag 1388
>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 162200 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 ||||||||||| |||||||||||||||||||||||||| Sbjct: 94438 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 94399 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 94127 ctggaggagaagaggaaagagaaagccaag 94098
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 93 gcgcgccaccacatgctgggacgccttgcgtcgatcgtggccaaggagctgctcaacggg 152 ||||||||||||||||| || || |||||||||||| || || ||||| ||||| || Sbjct: 27678 gcgcgccaccacatgcttggccgtcttgcgtcgatcaccgctaaagagcttctcaatggc 27619 Query: 153 cagcgcgtggtggtggttcggtgcgaggagatgtgcatctccggcgggctggtccgtcag 212 ||| || || | || |||||||| ||||| ||| |||||||||| || || |||||| Sbjct: 27618 cagaaagttgtcattgtccggtgcgaagagatttgcctctccggcggactcgttcgtcag 27559 Query: 213 aagatgaagtac 224 || ||||||||| Sbjct: 27558 aaaatgaagtac 27547
>emb|AJ388525.1|CFA388525 Canis familiaris mRNA for partial Ribosomal protein L13A (rpL13 gene) Length = 427 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 230 cttcctccgcaagcggatgaacaccaa 256 ||||||||||||||||||||||||||| Sbjct: 166 cttcctccgcaagcggatgaacaccaa 192
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggcc 554 ||||||||||||||||||||||||||| Sbjct: 137660 ctggaggagaagaggaaggagaaggcc 137634
>gb|AC035139.11| Homo sapiens chromosome 10 clone RP11-563N6, complete sequence Length = 210472 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggcc 554 ||||||||||||||||||||||||||| Sbjct: 1543 ctggaggagaagaggaaggagaaggcc 1517
>gb|AC022533.10| Homo sapiens chromosome 10 clone RP11-230D19, complete sequence Length = 174569 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggcc 554 ||||||||||||||||||||||||||| Sbjct: 136015 ctggaggagaagaggaaggagaaggcc 136041
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 40 ttcctccgcaagcggatgaacaccaa 65 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||| |||||| Sbjct: 338 tggaggagaagaggaaggagaaagccaag 366
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 757 ttcctccgcaagcggatgaacaccaa 782 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1054 ctggaggagaagaggaaagagaaagccaag 1083
>ref|XM_520729.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465277), mRNA Length = 662 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 485 ctggaggagaagaggaaggagaaagccaag 514
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 316 ttcctccgcaagcggatgaacaccaa 341 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 613 ctggaggagaagaggaaagagaaagccaag 642
>ref|XM_512656.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456029), mRNA Length = 570 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 90 ttcctccgcaagcggatgaacaccaa 115 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 386 ctggaggagaagaggaaagagaaagccaag 415
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaa 217 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>ref|XM_509803.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452746), mRNA Length = 713 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 197 ttcctccgcaagcggatgaacaccaa 222 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 494 ctggaggagaagaggaaagagaaagccaag 523
>ref|XM_508935.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC451757), mRNA Length = 690 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||| ||||||||||||||| Sbjct: 394 ctggaggagaagagaaaggagaaggccaag 423
>ref|XM_508036.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC450737), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 196 ttcctccgcaagcggatgaacaccaa 221 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 493 ctggaggagaagaggaaagagaaagccaa 521
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||| ||||||||||||||||| Sbjct: 470 ctggaggagaagcggaaggagaaggccaag 499 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 244 ggatgaacaccaagccgtcgcacggtcccatccacttccg 283 ||||||||||||| || |||| |||||| |||||||||| Sbjct: 186 ggatgaacaccaacccctcgcggggtcccttccacttccg 225
>gb|DQ216003.1| Taeniopygia guttata clone 0058P0045E08 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||| ||||||||||||||||| Sbjct: 499 ctggaggagaagcggaaggagaaggccaag 528
>gb|DQ216001.1| Taeniopygia guttata clone 0058P0049C02 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||| ||||||||||||||||| Sbjct: 499 ctggaggagaagcggaaggagaaggccaag 528
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 169 ttcctccgcaagcggatgaacaccaa 194 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 466 ctggaggagaagaggaaagagaaagccaag 495
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>ref|XM_526130.1| PREDICTED: Pan troglodytes similar to APG7 autophagy 7-like; ubiquitin activating enzyme E1-like protein (LOC470747), mRNA Length = 2091 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| |||||||||||| Sbjct: 198 ctggaggagaagaggaatgagaaggccaag 169
>gb|DQ200397.1| Solanum tuberosum clone 070F10 60S ribosomal protein L13a-like protein mRNA, complete cds Length = 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 511 atgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgaca 570 |||| ||||||||||| || ||| | ||||| ||||||| ||| |||| | ||||| | Sbjct: 503 atgacactatcaaggagcttgagaacaagagaaaggagagagcccaggtagcatacgaga 562 Query: 571 ggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagct 628 |||| ||||| ||||||| || | || ||||| ||||||||||| ||||||||||| Sbjct: 563 ggagaaagcagttggccaaactcagggttaaggccgagaaggctgctgaggagaagct 620
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 179 ttcctccgcaagcggatgaacaccaa 204 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 476 ctggaggagaagaggaaagagaaagccaag 505
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 174 ttcctccgcaagcggatgaacaccaa 199 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 471 ctggaggagaagaggaaagagaaagccaag 500
>ref|XM_533620.2| PREDICTED: Canis familiaris Ribosomal protein L13a (RPL13A), mRNA Length = 525 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||| ||||||||||| Sbjct: 343 ctggaggagaagaggaagaagaaggccaag 372
>gb|AC146032.2| Pan troglodytes BAC clone RP43-14B10 from 7, complete sequence Length = 181694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 30189 ttcctccgcaagcggatgaacaccaa 30164 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 29892 ctggaggagaagaggaaagagaaagccaag 29863
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 167 ttcctccgcaagcggatgaacaccaa 192 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 464 ctggaggagaagaggaaagagaaagccaag 493
>gb|BC043976.1| Xenopus laevis ribosomal protein L13a, mRNA (cDNA clone MGC:54018 IMAGE:5571546), complete cds Length = 819 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||| ||||||||||||||| Sbjct: 555 ctggaggagaagagaaaggagaaggccaag 584
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 165 ttcctccgcaagcggatgaacaccaa 190 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 462 ctggaggagaagaggaaagagaaagccaag 491
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 840 ttcctccgcaagcggatgaacaccaa 865 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1137 ctggaggagaagaggaaagagaaagccaag 1166
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 2045 ttcctccgcaagcggatgaacaccaa 2070 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 2341 ctggaggagaagaggaaagagaaagccaag 2370
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 50271 tgaagtacctgggctttctccgcaagcggatgaacacc 50308 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 50577 agaagaggaaggagaaggccaag 50599 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 49186 ggagaagaggaaggagaagaccaag 49210
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 56692 tgaagtacctgggctttctccgcaagcggatgaacacc 56729 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 56998 agaagaggaaggagaaggccaag 57020 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 55607 ggagaagaggaaggagaagaccaag 55631
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 33564 tgaagtacctgggctttctccgcaagcggatgaacacc 33601 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 33870 agaagaggaaggagaaggccaag 33892 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 32479 ggagaagaggaaggagaagaccaag 32503
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 81036 ttcctccgcaagcggatgaacaccaa 81061 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 81333 ctggaggagaagaggaaagagaaagccaag 81362
>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3' end of the PDCD4 gene for programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047), a novel gene (LOC92482), the SHOC2 gene for soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic, alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR, ZNF32, ADRA2R) and two CpG islands, complete sequence Length = 204908 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 54593 ttcctccgcaagcggatgaacaccaa 54568 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 54296 ctggaggagaagaggaaagagaaagccaa 54268
>emb|Y09971.1|CPRPL13A C.paradoxa mRNA for ribosomal protein L13a Length = 710 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 318 ggcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttc 377 ||||||||||| |||||||| |||||||||| || || || | |||||||||| ||| Sbjct: 269 ggcatgatcccccacaagaccccccgcggcgctgcggccctggagcggctgaaggccttc 328 Query: 378 gagggcgtcccgcc 391 |||||||| ||||| Sbjct: 329 gagggcgtgccgcc 342
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacaccaa 211 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 483 ctggaggagaagaggaaagagaaagccaag 512
>emb|AJ843089.1| Platichthys flesus mRNA for 60S ribosomal protein L13A (rpl13A gene) Length = 686 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||| ||||||||||||||| Sbjct: 493 ctggaggagaagagaaaggagaaggccaag 522
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 28590 tgaagtacctgggctttctccgcaagcggatgaacacc 28627 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 28896 agaagaggaaggagaaggccaag 28918 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 27505 ggagaagaggaaggagaagaccaag 27529
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 402 ctggaggagaagaggaaggagaaagccaag 431 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||| ||||||||||||||||||| Sbjct: 101 ttcctcggcaagcggatgaacaccaa 126
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 5416 tgaagtacctgggctttctccgcaagcggatgaacacc 5453 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 5722 agaagaggaaggagaaggccaag 5744 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 4331 ggagaagaggaaggagaagaccaag 4355
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 53975 tgaagtacctgggctttctccgcaagcggatgaacacc 54012 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 54281 agaagaggaaggagaaggccaag 54303 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 52890 ggagaagaggaaggagaagaccaag 52914
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 2946 ctggaggagaagaggaaggagaaagccaag 2917
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||| ||||||||||||||| Sbjct: 489 ctggaggagaagagaaaggagaaggccaag 518 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 ctccgcaagcggatgaacaccaa 256 ||||||||||||||||||||||| Sbjct: 195 ctccgcaagcggatgaacaccaa 217
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 643 ttcctccgcaagcggatgaacaccaa 668 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1484 ctggaggagaagaggaaagagaaagccaag 1513
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 147 ttcctccgcaagcggatgaacaccaa 172 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 444 ctggaggagaagaggaaagagaaagccaag 473
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 677 ttcctccgcaagcggatgaacaccaa 702 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 1679 ctggaggagaagaggaaagagaaagccaag 1708
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 155 ttcctccgcaagcggatgaacaccaa 180 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 452 ctggaggagaagaggaaagagaaagccaag 481
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 77660 ttcctccgcaagcggatgaacaccaa 77685 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 78659 ctggaggagaagaggaaagagaaagccaag 78688
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>gb|AC084878.12| Homo sapiens 12q BAC RP11-101K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135060 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| |||| Sbjct: 77810 ctggaggagaagaggaaggagaaggtcaag 77781
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||| ||||||||||||||||| Sbjct: 60112 ctggaggagaagtggaaggagaaggccaag 60141 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||| ||||||||||||||||||||| Sbjct: 59816 ttcccccgcaagcggatgaacaccaa 59841
>ref|XM_931056.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC284821), mRNA Length = 1132 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 178 tgaagtacctgggtttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>ref|XM_931051.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC284821), mRNA Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 178 tgaagtacctgggtttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>ref|XM_931046.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC284821), mRNA Length = 1050 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 96 tgaagtacctgggtttcctccgcaagcggatgaacacc 133 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 406 ctggaggagaagaggaaagagaaagccaag 435
>ref|XM_931040.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC284821), mRNA Length = 1067 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 177 tgaagtacctgggtttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 423 ctggaggagaagaggaaagagaaagccaag 452
>ref|XM_926157.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC284821), mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 177 tgaagtacctgggtttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaag 516
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 401 ctggaggagaagaggaaggagaaagccaag 430 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||| ||||||||||||||||||| Sbjct: 100 ttcctcggcaagcggatgaacaccaa 125
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 401 ctggaggagaagaggaaggagaaagccaag 430 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||| ||||||||||||||||||| Sbjct: 100 ttcctcggcaagcggatgaacaccaa 125
>ref|XM_945323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649250), mRNA Length = 655 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaa 515
>ref|XM_941634.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649250), mRNA Length = 667 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaa 515
>ref|XM_945318.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649250), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaacaccaa 210 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 416 ctggaggagaagaggaaagagaaagccaa 444
>ref|XM_944191.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC648326), mRNA Length = 703 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 193 ttcctccgcaagcggatgaacaccaa 218 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_944188.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648326), mRNA Length = 622 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 112 ttcctccgcaagcggatgaacaccaa 137 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 409 ctggaggagaagaggaaagagaaagccaag 438
>ref|XM_944185.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648326), mRNA Length = 595 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 85 ttcctccgcaagcggatgaacaccaa 110 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 382 ctggaggagaagaggaaagagaaagccaag 411
>ref|XM_944181.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648326), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 187 ttcctccgcaagcggatgaacaccaa 212 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 418 ctggaggagaagaggaaagagaaagccaag 447
>ref|XM_939484.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648326), mRNA Length = 711 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 201 ttcctccgcaagcggatgaacaccaa 226 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 498 ctggaggagaagaggaaagagaaagccaag 527
>ref|XM_930133.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC644511), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaa 515
>ref|XM_934381.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC644511), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaacaccaa 210 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaa 556 ||||||||||||||||| ||||| ||||| Sbjct: 416 ctggaggagaagaggaaagagaaagccaa 444
>ref|XM_932924.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC283340), mRNA Length = 700 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 193 ttcctccgcaagcggatgaacaccaa 218 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_932919.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA Length = 590 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 85 ttcctccgcaagcggatgaacaccaa 110 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 382 ctggaggagaagaggaaagagaaagccaag 411
>ref|XM_932916.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC283340), mRNA Length = 610 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacaccaa 130 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 402 ctggaggagaagaggaaagagaaagccaag 431
>ref|XM_208072.6| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC283340), mRNA Length = 708 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 201 ttcctccgcaagcggatgaacaccaa 226 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 498 ctggaggagaagaggaaagagaaagccaag 527
>ref|XM_932910.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC283340), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 187 ttcctccgcaagcggatgaacaccaa 212 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 418 ctggaggagaagaggaaagagaaagccaag 447
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||| ||||||||||||||| Sbjct: 1274 ctggaggagaagagaaaggagaaggccaag 1303 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 ctccgcaagcggatgaacaccaa 256 ||||||||||||||||||||||| Sbjct: 980 ctccgcaagcggatgaacaccaa 1002
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 74632 tgaagtacctgggctttctccgcaagcggatgaacacc 74595 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 74326 agaagaggaaggagaaggccaag 74304 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 75717 ggagaagaggaaggagaagaccaag 75693
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 76592 tgaagtacctgggctttctccgcaagcggatgaacacc 76629 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 76898 agaagaggaaggagaaggccaag 76920 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 75507 ggagaagaggaaggagaagaccaag 75531
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||| |||||| Sbjct: 489 tggaggagaagaggaaggagaaagccaag 517
>ref|NG_002538.1| Homo sapiens ribosomal protein L13a pseudogene 2 (RPL13AP2) on chromosome 14 Length = 773 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 532 aggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||| Sbjct: 505 aggagaagaggaaggagaaggccaag 530
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 162328 ctggaggagaagaggaaggagaaagccaag 162299
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaa 196 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 468 ctggaggagaagaggaaagagaaagccaag 497
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 10861 ttcctccgcaagcggatgaacaccaa 10886 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 11177 ctggaggagaagaggaaagagaaagccaag 11206
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaa 217 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaa 196 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 468 ctggaggagaagaggaaagagaaagccaag 497
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 175 ttcctccgcaagcggatgaacaccaa 200 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 472 ctggaggagaagaggaaagagaaagccaag 501
>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194760 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 aggagaagaggaaggagaaggccaag 557 |||||||||||||||||||||||||| Sbjct: 115365 aggagaagaggaaggagaaggccaag 115340
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| |||||| Sbjct: 124984 ctggaggagaagaggaaggagaaagccaag 124955 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||| ||||||||||||||||||| Sbjct: 125285 ttcctcggcaagcggatgaacaccaa 125260
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 108023 tgaagtacctgggtttcctccgcaagcggatgaacacc 108060 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 108333 ctggaggagaagaggaaagagaaagccaag 108362
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 24 ttcctccgcaagcggatgaacaccaa 49 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 321 ctggaggagaagaggaaagagaaagccaag 350
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| |||| ||||||||||||||||||||| Sbjct: 78972 tgaagtacctgggctttctccgcaagcggatgaacacc 79009 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 535 agaagaggaaggagaaggccaag 557 ||||||||||||||||||||||| Sbjct: 79278 agaagaggaaggagaaggccaag 79300 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| ||||| Sbjct: 77887 ggagaagaggaaggagaagaccaag 77911
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaa 197 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 469 ctggaggagaagaggaaagagaaagccaag 498
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaa 197 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 469 ctggaggagaagaggaaagagaaagccaag 498
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||||| ||||||||||||||| Sbjct: 464 ctggaggagaagagaaaggagaaggccaag 493 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 ctccgcaagcggatgaacaccaa 256 ||||||||||||||||||||||| Sbjct: 170 ctccgcaagcggatgaacaccaa 192
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacacc 254 |||||||||| | |||||||||||||||||||||||| Sbjct: 44832 tgaagtacctgggtttcctccgcaagcggatgaacacc 44869 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 45142 ctggaggagaagaggaaagagaaagccaag 45171
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacaccaa 256 |||||||||||||||||||||||||| Sbjct: 3669 ttcctccgcaagcggatgaacaccaa 3694 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 4669 ctggaggagaagaggaaagagaaagccaag 4698
>ref|NM_001016486.2| Xenopus tropicalis hypothetical protein LOC549240 (LOC549240), mRNA Length = 771 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaaggccaag 557 ||||||||||||| ||||||||||||||| Sbjct: 556 tggaggagaagagaaaggagaaggccaag 584
>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence Length = 189036 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| Sbjct: 115129 ggagaagaggaaggagaaggccaag 115153
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 68752 ttcctccgcaagcggatgaacacca 68776 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||||||||||| |||||||||| |||||| Sbjct: 69026 ctggaggagaaggggaaggagaaagccaag 69055
>emb|AL356120.10| Human DNA sequence from clone RP11-365K22 on chromosome 13 Contains a novel gene similar to ribosomal protein L13a (RPL13A), complete sequence Length = 83727 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 13610 ttcctccgcaagcggatgaacacca 13586 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 13313 ctggaggagaagaggaaagagaaagccaag 13284
>emb|CR859183.1| Pongo pygmaeus mRNA; cDNA DKFZp469O181 (from clone DKFZp469O181) Length = 772 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacca 216 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| Sbjct: 206939 ggagaagaggaaggagaaggccaag 206963 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 cttcctccgcaagcggatgaacac 253 |||| ||||||||||||||||||| Sbjct: 206657 cttcttccgcaagcggatgaacac 206680
>ref|XR_000921.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNA Length = 590 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacacca 129 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 402 ctggaggagaagaggaaagagaaagccaag 431
>ref|XR_000922.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 2 (LOC387930), misc RNA Length = 688 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 194 ttcctccgcaagcggatgaacacca 218 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 491 ctggaggagaagaggaaagagaaagccaag 520
>ref|XR_000923.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 3 (LOC387930), misc RNA Length = 605 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacacca 210 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 417 ctggaggagaagaggaaagagaaagccaag 446
>ref|NM_203308.1| Homo sapiens ribosomal protein L13A-like (MGC34774), mRNA Length = 1848 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| Sbjct: 1072 ggagaagaggaaggagaaggccaag 1096
>ref|XM_942899.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC642209), mRNA Length = 590 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacacca 129 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 402 ctggaggagaagaggaaagagaaagccaag 431
>ref|XM_936630.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC642209), mRNA Length = 688 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 194 ttcctccgcaagcggatgaacacca 218 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 491 ctggaggagaagaggaaagagaaagccaag 520
>ref|XM_942891.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC642209), mRNA Length = 605 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacca 255 ||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacacca 210 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 417 ctggaggagaagaggaaagagaaagccaag 446
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete sequence Length = 185838 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| Sbjct: 9118 ggagaagaggaaggagaaggccaag 9142
>gb|AC148689.1| Macaca mulatta Major Histocompatibility Complex BAC MMU222I18, complete sequence Length = 174202 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| Sbjct: 106180 ggagaagaggaaggagaaggccaag 106204
>gb|BC027852.1| Homo sapiens ribosomal protein L13A-like, mRNA (cDNA clone MGC:34774 IMAGE:5207622), complete cds Length = 1848 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 ggagaagaggaaggagaaggccaag 557 ||||||||||||||||||||||||| Sbjct: 1072 ggagaagaggaaggagaaggccaag 1096
>emb|CR760846.2| Xenopus tropicalis finished cDNA, clone TTpA004d22 Length = 771 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaaggccaag 557 ||||||||||||| ||||||||||||||| Sbjct: 556 tggaggagaagagaaaggagaaggccaag 584
>gb|BC052385.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:57944 IMAGE:5703859), complete cds Length = 3018 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 1991 tggaggagaagaggaaggagaagg 2014
>ref|NM_026539.1| Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA Length = 2991 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 2009 tggaggagaagaggaaggagaagg 2032
>ref|XR_002787.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaaggt 559 ||||||||||| ||||||||||||||||||| Sbjct: 486 ctggaggagaaacggaaggagaaggccaaggt 517
>ref|XR_004732.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaaggt 559 ||||||||||| ||||||||||||||||||| Sbjct: 486 ctggaggagaaacggaaggagaaggccaaggt 517
>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence Length = 191814 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 25583 tggaggagaagaggaaggagaagg 25560
>gb|BC020486.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone IMAGE:3708149) Length = 1179 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 179 tggaggagaagaggaaggagaagg 202
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaaggc 553 |||||||||||||||||||||||| Sbjct: 61017 ggaggagaagaggaaggagaaggc 60994
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 217 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 256 |||||||||| |||||||||||||| |||||||||||| Sbjct: 58387 tgaagtacctggtcttcctccgcaagcagatgaacaccaa 58426 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 532 aggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| |||||| Sbjct: 58700 aggagaagaggaaggagaaagccaag 58725
>gb|BC057567.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:66868 IMAGE:6415898), complete cds Length = 3037 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 2020 tggaggagaagaggaaggagaagg 2043
>ref|XM_945533.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC649564), mRNA Length = 1112 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 170 ttcctccgcaagcggatgaacacc 193 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 468 ctggaggagaagaggaaagagaaagccaag 497
>ref|XM_945532.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC649564), mRNA Length = 671 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_945529.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC649564), mRNA Length = 681 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_945527.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC649564), mRNA Length = 688 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_945523.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC649564), mRNA Length = 1052 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 110 ttcctccgcaagcggatgaacacc 133 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 408 ctggaggagaagaggaaagagaaagccaag 437
>ref|XM_945522.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649564), mRNA Length = 1134 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_941896.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649564), mRNA Length = 668 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>ref|XM_945517.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649564), mRNA Length = 1067 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaacacc 254 |||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 423 ctggaggagaagaggaaagagaaagccaag 452
>dbj|AK165656.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430108O15 product:chromodomain helicase DNA binding protein 1-like, full insert sequence Length = 2716 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 2034 tggaggagaagaggaaggagaagg 2057
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 528 ctggaggagaagaggaaggagaaggccaaggt 559 ||||||||||| ||||||||||||||||||| Sbjct: 124074 ctggaggagaaacggaaggagaaggccaaggt 124043
>dbj|AK014473.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432404A22 product:CDNA FLJ10480 FIS, CLONE NT2RP2000126, WEAKLY SIMILAR TO POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2991 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 2009 tggaggagaagaggaaggagaagg 2032
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 69045 tggaggagaagaggaaggagaagg 69068
>gb|BC062966.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:64788 IMAGE:6415898), complete cds Length = 3066 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 529 tggaggagaagaggaaggagaagg 552 |||||||||||||||||||||||| Sbjct: 2020 tggaggagaagaggaaggagaagg 2043
>gb|BC047855.1| Danio rerio ribosomal protein L13a, mRNA (cDNA clone MGC:56275 IMAGE:5602342), complete cds Length = 819 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 527 actggaggagaagaggaaggagaaggccaag 557 ||||||||||||||| ||||| ||||||||| Sbjct: 574 actggaggagaagagaaaggaaaaggccaag 604
>ref|XM_848715.1| PREDICTED: Canis familiaris similar to IQ motif containing D (LOC611081), mRNA Length = 1574 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 532 aggagaagaggaaggagaaggccaagg 558 |||||||| |||||||||||||||||| Sbjct: 1397 aggagaaggggaaggagaaggccaagg 1423
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaagg 552 ||||||||||||||||||||||| Sbjct: 49288 ggaggagaagaggaaggagaagg 49266
>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence Length = 199600 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 ggaggaagagaggaagggagaag 34 ||||||||||||||||||||||| Sbjct: 146155 ggaggaagagaggaagggagaag 146177
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaagg 552 ||||||||||||||||||||||| Sbjct: 102390 ggaggagaagaggaaggagaagg 102368
>gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, complete sequence Length = 113268 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaagg 552 ||||||||||||||||||||||| Sbjct: 96705 ggaggagaagaggaaggagaagg 96683
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaagg 552 ||||||||||||||||||||||| Sbjct: 131071 ggaggagaagaggaaggagaagg 131049
>ref|XM_703004.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 2 (LOC560828), mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 527 actggaggagaagaggaaggagaaggccaag 557 ||||||||||||||| ||||| ||||||||| Sbjct: 568 actggaggagaagagaaaggaaaaggccaag 598
>ref|XM_680687.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 1 (LOC560828), mRNA Length = 774 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 527 actggaggagaagaggaaggagaaggccaag 557 ||||||||||||||| ||||| ||||||||| Sbjct: 568 actggaggagaagagaaaggaaaaggccaag 598
>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 177428 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 530 ggaggagaagaggaaggagaagg 552 ||||||||||||||||||||||| Sbjct: 20046 ggaggagaagaggaaggagaagg 20024
>gb|AC137875.13| Mus musculus chromosome 15, clone RP23-62B15, complete sequence Length = 195956 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 ggaggaagagaggaagggagaag 34 ||||||||||||||||||||||| Sbjct: 166805 ggaggaagagaggaagggagaag 166783
>gb|AC144527.3| Homo sapiens BAC clone RP13-932E12 from 2, complete sequence Length = 22046 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 ggaggaagagaggaagggagaag 34 ||||||||||||||||||||||| Sbjct: 8238 ggaggaagagaggaagggagaag 8260
>emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 in linkage group 17, complete sequence Length = 166247 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 527 actggaggagaagaggaaggagaaggccaag 557 ||||||||||||||| ||||| ||||||||| Sbjct: 20917 actggaggagaagagaaaggaaaaggccaag 20887
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 230 cttcctccgcaagcggatgaacaccaa 256 |||||||||||||| |||||||||||| Sbjct: 90261 cttcctccgcaagcagatgaacaccaa 90287 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 532 aggagaagaggaaggagaaggccaag 557 ||||||||||||||||||| |||||| Sbjct: 90555 aggagaagaggaaggagaaagccaag 90580
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 530 ggaggagaagaggaaggagaagg 552 ||||||||||||||||||||||| Sbjct: 18594 ggaggagaagaggaaggagaagg 18616
>emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in linkage group 17, complete sequence Length = 117015 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 527 actggaggagaagaggaaggagaaggccaag 557 ||||||||||||||| ||||| ||||||||| Sbjct: 3354 actggaggagaagagaaaggaaaaggccaag 3384
>ref|NM_212784.1| Danio rerio ribosomal protein L13a (rpl13a), mRNA Length = 819 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 527 actggaggagaagaggaaggagaaggccaag 557 ||||||||||||||| ||||| ||||||||| Sbjct: 574 actggaggagaagagaaaggaaaaggccaag 604
>ref|XM_520754.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465300), mRNA Length = 680 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 ttcctccgcaagcggatgaaca 252 |||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaaca 212
>gb|DQ216005.1| Taeniopygia guttata clone 0058P0011D10 ribosomal protein L13A-like mRNA, complete sequence Length = 798 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggc 553 |||||||||||| ||||||||||||| Sbjct: 504 ctggaggagaagcggaaggagaaggc 529
>gb|DQ216004.1| Taeniopygia guttata clone 0058P0006F05 ribosomal protein L13A-like mRNA, complete sequence Length = 804 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggc 553 |||||||||||| ||||||||||||| Sbjct: 504 ctggaggagaagcggaaggagaaggc 529
>gb|DQ216002.1| Taeniopygia guttata clone 0058P0010A09 ribosomal protein L13A-like mRNA, complete sequence Length = 739 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggc 553 |||||||||||| ||||||||||||| Sbjct: 444 ctggaggagaagcggaaggagaaggc 469
>gb|DQ216000.1| Taeniopygia guttata clone 0058P0016A02 ribosomal protein L13A-like mRNA, complete sequence Length = 799 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggc 553 |||||||||||| ||||||||||||| Sbjct: 504 ctggaggagaagcggaaggagaaggc 529
>ref|XM_866179.1| PREDICTED: Bos taurus similar to ribosomal protein L13a (LOC614617), mRNA Length = 911 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tccgcaagcggatgaacaccaa 256 |||||||||||||||||||||| Sbjct: 308 tccgcaagcggatgaacaccaa 329
>gb|AC145993.3| Pan troglodytes BAC clone RP43-178E21 from 7, complete sequence Length = 176561 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 528 ctggaggagaagaggaaggagaaggccaag 557 |||| ||||||||||| ||||||||||||| Sbjct: 93537 ctgggggagaagaggacggagaaggccaag 93566 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,501,572 Number of Sequences: 3902068 Number of extensions: 5501572 Number of successful extensions: 168241 Number of sequences better than 10.0: 658 Number of HSP's better than 10.0 without gapping: 662 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 165176 Number of HSP's gapped (non-prelim): 3030 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)