| Clone Name | basdi08 |
|---|---|
| Clone Library Name | barley_pub |
>PTP2_CAEEL (P28192) Tyrosine-protein phosphatase 2 (EC 3.1.3.48)| (Protein-tyrosine phosphatase 2) Length = 1156 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +3 Query: 252 WPQGAAETHRPPLPFTISICD*CLSSMRGTVVSDVATIIPSVPDKTITVIIHHGSCCILI 431 W AA HRP L F++S+ VSD + + P TVI+ + S L Sbjct: 175 WTHNAARAHRPILRFSVSV----------RTVSDNTRFVMAAPSNATTVIVDNLSPYTLY 224 Query: 432 QFSIK 446 FS++ Sbjct: 225 AFSVR 229
>ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16) Length = 1222 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -3 Query: 139 CSPSPRGASGRGPCRTSPAPME-RYTSWQRVGRVTMGRSLPRVVLCS 2 C+P R +G PC+ SP P +W R G + R V C+ Sbjct: 907 CNPKTRPVTGLVPCKVSPCPSSWSVGNWSVCSRTCGGGTQSRPVRCT 953
>DHE4_NEUIN (Q9HGU4) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) (NADP-dependent glutamate dehydrogenase) Length = 453 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = -3 Query: 397 TVIVLSGTDGIIVATSDTTVPLIELRH*SHMLIVKGSGGRWVSAAPCGHLPW----RPW 233 TV+ LS + G +VAT ++ + + ++ + ++ +K + S GHL W RPW Sbjct: 243 TVVSLSDSKGALVATGESGITVEDI---NAVMAIKEARQSLTSFQHAGHLKWIEGARPW 298
>DHE4_NEUCR (P00369) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) (NADP-dependent glutamate dehydrogenase) Length = 453 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = -3 Query: 397 TVIVLSGTDGIIVATSDTTVPLIELRH*SHMLIVKGSGGRWVSAAPCGHLPW----RPW 233 TV+ LS + G +VAT ++ + + ++ + ++ +K + S GHL W RPW Sbjct: 243 TVVSLSDSKGALVATGESGITVEDI---NAVMAIKEARQSLTSFQHAGHLKWIEGARPW 298
>DNAK3_SYNY3 (P73098) Chaperone protein dnaK3 (Heat shock protein 70-3) (Heat| shock 70 kDa protein 3) (HSP70-3) Length = 771 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -3 Query: 145 RRCSPSPRGASGRGPCRTSPAPMERYTSWQRVGRVTMGR 29 RR +P PR +GRGP + Y W + RVT R Sbjct: 660 RREAPMPRAGAGRGPSLSKDYRSTAYADWDQ-SRVTRQR 697
>1A16_ARATH (Q9SAR0) 1-aminocyclopropane-1-carboxylate synthase 6 (EC 4.4.1.14)| (ACC synthase 6) (S-adenosyl-L-methionine methylthioadenosine-lyase 6) Length = 495 Score = 28.5 bits (62), Expect = 8.2 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = +2 Query: 371 ICPGQDYHCNHPSWFVLHLNSIQHQ 445 + PG +HC+ P WF + ++ H+ Sbjct: 399 VSPGGSFHCHEPGWFRVCFANMDHK 423 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,984,456 Number of Sequences: 219361 Number of extensions: 876366 Number of successful extensions: 2602 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2525 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2602 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)