ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdi06 |
|---|---|
| Clone Library Name | barley_pub |
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 60.1 bits (144), Expect = 1e-09 Identities = 27/32 (84%), Positives = 30/32 (93%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YGE+LD+KIINDRETGRSRGFGFVTF E+SM Sbjct: 31 YGEVLDSKIINDRETGRSRGFGFVTFKDEKSM 62
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 59.7 bits (143), Expect = 2e-09 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YGEILD+K+I DRETGRSRGFGFVTF SE SM Sbjct: 31 YGEILDSKVITDRETGRSRGFGFVTFSSENSM 62
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 57.8 bits (138), Expect = 6e-09 Identities = 25/32 (78%), Positives = 30/32 (93%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GE++D+KIINDRETGRSRGFGFVTF E+SM Sbjct: 29 FGEVIDSKIINDRETGRSRGFGFVTFKDEKSM 60
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 57.0 bits (136), Expect = 1e-08 Identities = 25/32 (78%), Positives = 30/32 (93%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GE++D+KIINDRETGRSRGFGFVTF E+SM Sbjct: 31 FGELVDSKIINDRETGRSRGFGFVTFKDEKSM 62
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 57.0 bits (136), Expect = 1e-08 Identities = 24/32 (75%), Positives = 30/32 (93%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YG+++D+KIINDRETGRSRGFGFVTF E++M Sbjct: 31 YGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 56.6 bits (135), Expect = 1e-08 Identities = 23/32 (71%), Positives = 30/32 (93%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+++D+K+I DRETGRSRGFGFVTF SE+SM Sbjct: 31 FGQVIDSKVITDRETGRSRGFGFVTFSSEQSM 62
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 55.8 bits (133), Expect = 2e-08 Identities = 25/32 (78%), Positives = 29/32 (90%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+I D+KIINDRETGRSRGFGFVTF E+SM Sbjct: 29 FGDITDSKIINDRETGRSRGFGFVTFKDEKSM 60
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 53.9 bits (128), Expect = 9e-08 Identities = 22/32 (68%), Positives = 30/32 (93%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+++D+KIINDRE+GRSRGFGFVTF E++M Sbjct: 29 FGDVIDSKIINDRESGRSRGFGFVTFKDEKAM 60
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YGE+L++KII DRET RSRGFGFVTF +EE+M Sbjct: 10 YGEVLESKIILDRETQRSRGFGFVTFSTEEAM 41
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/29 (68%), Positives = 25/29 (86%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSE 102 +G+++DAK+I DRETGRSRGFGFV F E Sbjct: 58 FGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+++ A+++ DRETGRSRGFGFVT SE M Sbjct: 253 HGKVVSARVVYDRETGRSRGFGFVTMASEAEM 284 Score = 31.6 bits (70), Expect = 0.48 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G + A++I +R+T +SRGFGFVT + E Sbjct: 160 GVVEIAEVIYNRDTDQSRGFGFVTMSTVE 188
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/32 (56%), Positives = 27/32 (84%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+++ A++++DRETGRSRGFGFVT SE + Sbjct: 172 HGKVVSARVVSDRETGRSRGFGFVTMSSESEV 203 Score = 34.3 bits (77), Expect = 0.074 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G + A++I +RET RSRGFGFVT + E Sbjct: 79 GVVEIAEVIYNRETDRSRGFGFVTMSTVE 107
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/31 (58%), Positives = 27/31 (87%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G+++DAK++ DR++GRSRGFGFVT+ S E + Sbjct: 218 GKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 248 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G + ++I D+ TGRSRGFGFVT S+E + Sbjct: 111 GNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/31 (58%), Positives = 27/31 (87%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G+++DAK++ DR++GRSRGFGFVT+ S E + Sbjct: 212 GKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 242 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G + ++I D+ TGRSRGFGFVT S+E + Sbjct: 111 GNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 45.1 bits (105), Expect = 4e-05 Identities = 17/31 (54%), Positives = 26/31 (83%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G ++DAK++ DR++GRSRGFGFVT+ S + + Sbjct: 231 GNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261 Score = 36.2 bits (82), Expect = 0.019 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +1 Query: 1 GRLQPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G + G + ++I D+ TGRSRGFGFVT ++E + Sbjct: 105 GLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEV 141
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 45.1 bits (105), Expect = 4e-05 Identities = 18/32 (56%), Positives = 26/32 (81%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+++ A+++ DRE+GRSRGFGFVT SE M Sbjct: 214 HGKVVSARVVFDRESGRSRGFGFVTMSSEAEM 245 Score = 35.0 bits (79), Expect = 0.043 Identities = 17/32 (53%), Positives = 22/32 (68%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 Q G + A++I +RET RSRGFGFVT + E Sbjct: 118 QQAGVVEIAEVIYNRETDRSRGFGFVTMSTVE 149
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 44.7 bits (104), Expect = 5e-05 Identities = 17/31 (54%), Positives = 26/31 (83%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G ++DAK++ DR++GRSRGFGFVT+ S + + Sbjct: 232 GNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +1 Query: 1 GRLQPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G + G + ++I D+ +GRSRGFGFVT ++E + Sbjct: 106 GLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEV 142
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 43.9 bits (102), Expect = 9e-05 Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 4/41 (9%) Frame = +1 Query: 1 GRLQP----YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 GRL+ +G++++A+++ DRETGRSRGFGFVT + + Sbjct: 258 GRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDEL 298 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGS 99 G + A++I +RET +SRGFGFVT S Sbjct: 174 GTVEIAEVIYNRETDQSRGFGFVTMSS 200
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +1 Query: 28 LDAKIINDRETGRSRGFGFVTFGSEESM 111 + AK+I DR +GRSRGFGF+TF S E+M Sbjct: 244 MSAKVIYDRSSGRSRGFGFITFSSAEAM 271 Score = 35.8 bits (81), Expect = 0.025 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G + + +I+ DR T RSRGF FVT GS E Sbjct: 138 GTVANVEIVYDRVTDRSRGFAFVTMGSVE 166
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 42.0 bits (97), Expect = 4e-04 Identities = 15/31 (48%), Positives = 27/31 (87%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G++++A++I DR++GRS+GFGFVT+ S + + Sbjct: 228 GKVVEARVIYDRDSGRSKGFGFVTYDSSQEV 258 Score = 33.9 bits (76), Expect = 0.096 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGS 99 G + ++I D+ TGRSRGFGFVT S Sbjct: 115 GNVEMVEVIYDKITGRSRGFGFVTMSS 141
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/32 (50%), Positives = 28/32 (87%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G I+DA+++ D++TG+SRGFGFVT+ S +++ Sbjct: 266 WGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/32 (53%), Positives = 22/32 (68%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YG + D KI+ D TGRSRGFGF++F S+ Sbjct: 182 YGTVTDLKIMKDPATGRSRGFGFLSFEKPSSV 213
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +1 Query: 1 GRLQPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 G +P+G I +++ D ETGRS+G+GF+TF E Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 G++ D ++I+DR + RSRG +V F Sbjct: 177 GKVRDVRMISDRNSRRSRGIAYVEF 201
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +1 Query: 1 GRLQPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 G +P+G I +++ D ETGRS+G+GF+TF E Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 G++ D ++I+DR + RS+G +V F Sbjct: 177 GKVRDVRMISDRNSRRSKGIAYVEF 201
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 41.2 bits (95), Expect = 6e-04 Identities = 15/31 (48%), Positives = 26/31 (83%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G++++A++I DR++GRS+GFGFVT S + + Sbjct: 281 GKVVEARVIYDRDSGRSKGFGFVTLSSSQEV 311 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGS 99 G + ++I D+ TGRSRGFGFVT + Sbjct: 123 GNVEMVEVIYDKVTGRSRGFGFVTMST 149
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I + ++ DRET RSRGFGFVTF Sbjct: 29 YGQISEVVVVKDRETQRSRGFGFVTF 54
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I + ++ DRET RSRGFGFVTF Sbjct: 29 YGQISEVVVVKDRETQRSRGFGFVTF 54
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I + ++ DRET RSRGFGFVTF Sbjct: 29 YGQISEVVVVKDRETQRSRGFGFVTF 54
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I + ++ DRET RSRGFGFVTF Sbjct: 29 YGQISEVVVVKDRETQRSRGFGFVTF 54
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I + ++ DRET RSRGFGFVTF Sbjct: 29 YGQISEVVVVKDRETQRSRGFGFVTF 54
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/26 (65%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I + ++ DRET RSRGFGFVTF Sbjct: 28 YGRISEVVVVKDRETKRSRGFGFVTF 53
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESMXXXXXXXXXXXPVEVLSAGPRLIAQLSI 195 +G+I+D ++ + E+GRSRGFGFVTF ++ VL GP + +I Sbjct: 30 FGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN------------HVLQNGPHTLDGRTI 77 Query: 196 HP 201 P Sbjct: 78 DP 79 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/32 (43%), Positives = 23/32 (71%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YG++ + I+ D+E +SRGFGF++F E S+ Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV 150
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 Query: 34 AKIINDRETGRSRGFGFVTFGSEE 105 A+I+ DRETG S+GFGFV F SEE Sbjct: 597 ARIVTDRETGSSKGFGFVDFNSEE 620
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 40.0 bits (92), Expect = 0.001 Identities = 14/27 (51%), Positives = 23/27 (85%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G+I DA+++ D TG+S+G+GFV+F Sbjct: 119 PFGKISDARVVKDMATGKSKGYGFVSF 145
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 Query: 34 AKIINDRETGRSRGFGFVTFGSEE 105 A+I+ DRETG S+GFGFV F SEE Sbjct: 600 ARIVTDRETGSSKGFGFVDFNSEE 623
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 Query: 34 AKIINDRETGRSRGFGFVTFGSEE 105 A+I+ DRETG S+GFGFV F SEE Sbjct: 597 ARIVTDRETGSSKGFGFVDFNSEE 620
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 Query: 34 AKIINDRETGRSRGFGFVTFGSEE 105 A+I+ DRETG S+GFGFV F SEE Sbjct: 594 ARIVTDRETGSSKGFGFVDFNSEE 617
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 Query: 34 AKIINDRETGRSRGFGFVTFGSEE 105 A+I+ DRETG S+GFGFV F SEE Sbjct: 599 ARIVTDRETGSSKGFGFVDFNSEE 622
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 Query: 34 AKIINDRETGRSRGFGFVTFGSEE 105 A+I+ DRETG S+GFGFV F SEE Sbjct: 598 ARIVTDRETGSSKGFGFVDFNSEE 621
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 40.0 bits (92), Expect = 0.001 Identities = 14/27 (51%), Positives = 23/27 (85%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G+I DA+++ D TG+S+G+GFV+F Sbjct: 136 PFGKISDARVVKDMATGKSKGYGFVSF 162
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 40.0 bits (92), Expect = 0.001 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +1 Query: 1 GRLQPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 G +P+G+I + ++ D +TGRS+G+GF+TF E Sbjct: 281 GIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G++ D +II+DR + RS+G +V F +S+ Sbjct: 190 GKVRDVRIISDRNSRRSKGIAYVEFCEIQSV 220
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 39.7 bits (91), Expect = 0.002 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G I DA+++ D TG+S+G+GFV+F Sbjct: 128 PFGRISDARVVKDMATGKSKGYGFVSF 154
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 39.7 bits (91), Expect = 0.002 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G I DA+++ D TG+S+G+GFV+F Sbjct: 128 PFGRISDARVVKDMATGKSKGYGFVSF 154
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 39.3 bits (90), Expect = 0.002 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + YG+I +II D+++G+ RGFGFVTF + Sbjct: 121 EEYGKIESTEIITDKQSGKKRGFGFVTFNDHD 152 Score = 33.5 bits (75), Expect = 0.13 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + +G++ D ++ D + RSRGFGFVTF Sbjct: 30 EQWGQLTDCVVMRDPASKRSRGFGFVTF 57
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 39.3 bits (90), Expect = 0.002 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G I + ++ DRET RSRGFGF+TF + E Sbjct: 29 FGPISEVVVVKDRETQRSRGFGFITFTNPE 58
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 39.3 bits (90), Expect = 0.002 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G I + ++ DRET RSRGFGF+TF + E Sbjct: 29 FGPISEVVVVKDRETQRSRGFGFITFTNPE 58
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 38.9 bits (89), Expect = 0.003 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + YG+I +II DR++G+ RGFGFVTF + Sbjct: 121 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152 Score = 34.7 bits (78), Expect = 0.056 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGS 99 + +G++ D ++ D + RSRGFGFVTF S Sbjct: 30 EQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 38.9 bits (89), Expect = 0.003 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + YG+I +II DR++G+ RGFGFVTF + Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164 Score = 34.7 bits (78), Expect = 0.056 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGS 99 + +G++ D ++ D + RSRGFGFVTF S Sbjct: 42 EQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + +G++ DA ++ D+ T R RGFGFVTF SE+ Sbjct: 130 EQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +GE+ + ++ D T RSRGFGFVTF Sbjct: 43 FGEVKECLVMRDPLTKRSRGFGFVTF 68
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + +G++ DA ++ D+ T R RGFGFVTF SE+ Sbjct: 130 EQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +GE+ + ++ D T RSRGFGFVTF Sbjct: 43 FGEVKECLVMRDPLTKRSRGFGFVTF 68
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + +G++ DA ++ D+ T R RGFGFVTF SE+ Sbjct: 130 EQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +GE+ + ++ D T RSRGFGFVTF Sbjct: 43 FGEVKECLVMRDPLTKRSRGFGFVTF 68
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/25 (60%), Positives = 22/25 (88%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVT 90 +G+I +A +I DR+TG+SRG+GFVT Sbjct: 55 FGDIEEAVVITDRQTGKSRGYGFVT 79
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/25 (60%), Positives = 22/25 (88%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVT 90 +G+I +A +I DR+TG+SRG+GFVT Sbjct: 34 FGDIEEAVVITDRQTGKSRGYGFVT 58
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGS 99 YG I++ ++ DRET +SRGF FVTF S Sbjct: 31 YGRIVEVLLMKDRETNKSRGFAFVTFES 58
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 QPYG+I+ K I D+ T + +G+GFV F S S Sbjct: 79 QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSS 111
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGS 99 YG I++ ++ DRET +SRGF FVTF S Sbjct: 31 YGRIVEILLMKDRETNKSRGFAFVTFES 58
>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding| subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 274 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +1 Query: 7 LQPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 L P+ I ++ ++ETG+SRG FVTF SEE Sbjct: 212 LFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEE 244
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 37.7 bits (86), Expect = 0.007 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YGE++D I+ D+ T +SRGFGFV F Sbjct: 33 YGEVVDCVIMKDKTTNQSRGFGFVKF 58 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G + + +I D E R RGFGF+TF E+S+ Sbjct: 137 FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 168
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 37.7 bits (86), Expect = 0.007 Identities = 15/32 (46%), Positives = 24/32 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + +G++ DA ++ D+ T R RGFGFVTF +E+ Sbjct: 131 EQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 162 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GEI + ++ D T RSRGFGFVTF S+ Sbjct: 44 FGEIRECMVMRDPTTKRSRGFGFVTFADPASV 75
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 37.7 bits (86), Expect = 0.007 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YGE++D I+ D+ T +SRGFGFV F Sbjct: 33 YGEVVDCVIMKDKTTNQSRGFGFVKF 58 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G + + +I D E R RGFGF+TF E+S+ Sbjct: 136 FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GE++D I D TGRSRGFGF+ F S+ Sbjct: 98 FGEVVDCTIKMDPNTGRSRGFGFILFKDSSSV 129
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 37.7 bits (86), Expect = 0.007 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YGE++D I+ D+ T +SRGFGFV F Sbjct: 33 YGEVVDCVIMKDKTTNQSRGFGFVKF 58 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G + + +I D E R RGFGF+TF E+S+ Sbjct: 136 FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/32 (53%), Positives = 22/32 (68%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GE++D + D TGRSRGFGFV F ES+ Sbjct: 120 FGEVVDCTLKLDPITGRSRGFGFVLFKESESV 151 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GE+ ++ D +T + RGF F+TF EE Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFITFKEEE 234
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/32 (53%), Positives = 22/32 (68%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GE++D + D TGRSRGFGFV F ES+ Sbjct: 120 FGEVVDCTLKLDPITGRSRGFGFVLFKESESV 151 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GE+ ++ D +T + RGF F+TF EE Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFITFKEEE 234
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGS 99 PYG I AK++ D E GRS+GFGFV F + Sbjct: 309 PYGNITSAKVMTDEE-GRSKGFGFVCFNA 336 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/33 (45%), Positives = 25/33 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +PYG+I K+++ +E G+S+GFGFV F + E+ Sbjct: 204 EPYGKITSYKVMS-KEDGKSKGFGFVAFETTEA 235 Score = 32.7 bits (73), Expect = 0.21 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K+ D E G S+G+GFV F +EE+ Sbjct: 113 FGNILSCKVATD-EKGNSKGYGFVHFETEEA 142
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 37.7 bits (86), Expect = 0.007 Identities = 15/32 (46%), Positives = 24/32 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + +G++ DA ++ D+ T R RGFGFVTF +E+ Sbjct: 131 EQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 162 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GEI + ++ D T RSRGFGFVTF S+ Sbjct: 44 FGEIRECMVMRDPTTKRSRGFGFVTFADPASV 75
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 37.4 bits (85), Expect = 0.009 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 28 LDAKIINDRETGRSRGFGFVTFGSEE 105 + A+I+ DR+TG S+GFGFV F S E Sbjct: 577 ISARIVTDRDTGSSKGFGFVDFSSPE 602
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG + + KI+NDR G S+G+GFVTF ++E Sbjct: 56 YGSVKEVKIVNDR-AGVSKGYGFVTFETQE 84
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG + + KI+NDR G S+G+GFVTF ++E Sbjct: 56 YGSVKEVKIVNDR-AGVSKGYGFVTFETQE 84
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 37.0 bits (84), Expect = 0.011 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGS 99 QPYG+I+ K I D+ T + +G+GFV F S Sbjct: 83 QPYGKIVSTKAILDKTTNKCKGYGFVDFDS 112
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 37.0 bits (84), Expect = 0.011 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGS 99 QPYG+I+ K I D+ T + +G+GFV F S Sbjct: 77 QPYGKIVSTKAILDKTTNKCKGYGFVDFDS 106
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 37.0 bits (84), Expect = 0.011 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGS 99 QPYG+I+ K I D+ T + +G+GFV F S Sbjct: 83 QPYGKIVSTKAILDKATNKCKGYGFVDFDS 112
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 37.0 bits (84), Expect = 0.011 Identities = 14/28 (50%), Positives = 22/28 (78%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + +GEI+D ++ D +T RSRGFGF+T+ Sbjct: 38 EQWGEIVDVVVMKDPKTKRSRGFGFITY 65 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG ++ A I+ D+ET + RGF FV F Sbjct: 131 YGTVVSAAIVVDKETRKKRGFAFVEF 156
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +GE++D I D TGRSRGFGF+ F S+ Sbjct: 91 FGEVVDCTIKMDPNTGRSRGFGFILFKDAASV 122
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 37.0 bits (84), Expect = 0.011 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 Q +G I+D I+ D+ETG+ RGF FV F Sbjct: 143 QHFGNIVDINIVIDKETGKKRGFAFVEF 170 Score = 35.0 bits (79), Expect = 0.043 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G I+D ++ D T RSRGFGF+T+ S SM Sbjct: 52 EKWGNIVDVVVMKDPRTKRSRGFGFITY-SHSSM 84
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSE 102 +GEI D ++ D T RSRGFGFVTF + Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGK 74 Score = 35.8 bits (81), Expect = 0.025 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YG + ++II D+ T + RGFGFVTF +S+ Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D +TGRSRGFGFV +G+ E Sbjct: 214 FGNTLSVKVMMD-DTGRSRGFGFVNYGNHE 242 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 PYG I AK++ E G S+GFGFV F S E Sbjct: 316 PYGTITSAKVMT--EGGHSKGFGFVCFSSPE 344 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D SRG+GFV F ++E+ Sbjct: 122 FGNILSCKVVCDEHG--SRGYGFVHFETQEA 150
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 36.6 bits (83), Expect = 0.015 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG + + KI+NDR G S+G+GF+TF ++E Sbjct: 56 YGSVKEVKIVNDR-AGVSKGYGFITFETQE 84
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G+++D + D TGRSRGFGFV F ES+ Sbjct: 118 FGDVVDCTLKLDPITGRSRGFGFVLFKESESV 149 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GE+ ++ D +T + RGF F+TF EE Sbjct: 203 FGEVESIELPMDNKTNKRRGFCFITFKEEE 232
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 36.6 bits (83), Expect = 0.015 Identities = 14/31 (45%), Positives = 24/31 (77%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 + + +A+++ ++ TGRSRG+GFV F SE+S Sbjct: 54 FNGVTEARVMTNKVTGRSRGYGFVNFISEDS 84
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 36.6 bits (83), Expect = 0.015 Identities = 14/33 (42%), Positives = 25/33 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 + YG I+ A++I D ++GRS+G+G+V F + E+ Sbjct: 284 EEYGTIVGARVIMDGQSGRSKGYGYVDFETPEA 316 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G+I ++ D ++GR +GFG+VTF +S Sbjct: 390 GDIQSIRLPTDPQSGRLKGFGYVTFSDIDS 419
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 36.2 bits (82), Expect = 0.019 Identities = 13/34 (38%), Positives = 24/34 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +++ DR++G+ RGF FVTF +++ Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 180 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D +T RSRGFGFVT+ E + Sbjct: 56 EKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 36.2 bits (82), Expect = 0.019 Identities = 13/34 (38%), Positives = 24/34 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +++ DR++G+ RGF FVTF +++ Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 180 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D +T RSRGFGFVT+ E + Sbjct: 56 EKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 36.2 bits (82), Expect = 0.019 Identities = 13/34 (38%), Positives = 24/34 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +++ DR++G+ RGF FVTF +++ Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 180 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D +T RSRGFGFVT+ E + Sbjct: 56 EKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 36.2 bits (82), Expect = 0.019 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = +1 Query: 28 LDAKIINDRETGRSRGFGFVTFGSEE 105 ++A+I+ DR+TG S+GFGFV F + E Sbjct: 526 VNARIVTDRDTGASKGFGFVDFSTAE 551
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 36.2 bits (82), Expect = 0.019 Identities = 13/34 (38%), Positives = 24/34 (70%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +++ DR++G+ RGF FVTF +++ Sbjct: 139 ESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 172 Score = 35.8 bits (81), Expect = 0.025 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G++ D ++ D +T RSRGFGFVT+ E + Sbjct: 48 EQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 35.8 bits (81), Expect = 0.025 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + YG+I +II D+++G+ RGF FVTF + Sbjct: 121 EEYGKIDSIEIITDKQSGKKRGFAFVTFDDHD 152 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + +G + D ++ D + RSRGFGFVTF Sbjct: 30 EQWGTLTDCVVMRDPASKRSRGFGFVTF 57
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 35.8 bits (81), Expect = 0.025 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YG+I +++ DR++G+ RGF FVTF +++ Sbjct: 141 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 172 Score = 35.8 bits (81), Expect = 0.025 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G++ D ++ D +T RSRGFGFVT+ E + Sbjct: 48 EQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 35.8 bits (81), Expect = 0.025 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YGEI + D +TGRSRGF F+ F + E++ Sbjct: 79 YGEIESINVKTDPQTGRSRGFAFIVFTNTEAI 110 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G I++ ++ D++ + +GF F+TF SE+ Sbjct: 159 FGNIVEVEMPFDKQKSQRKGFCFITFDSEQ 188
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +I+ DR +G+ RGF FVTF +S+ Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D T RSRGFGFVT+ + E + Sbjct: 34 EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +I+ DR +G+ RGF FVTF +S+ Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D T RSRGFGFVT+ + E + Sbjct: 34 EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGS 99 YG I++ ++ DRET +SRGF FVT S Sbjct: 31 YGRIVEIILMKDRETNKSRGFAFVTLES 58
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +I+ DR +G+ RGF FVTF +S+ Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D T RSRGFGFVT+ + E + Sbjct: 34 EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +I+ DR +G+ RGF FVTF +S+ Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D T RSRGFGFVT+ + E + Sbjct: 34 EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D ++GRSRGFGFV +G+ E Sbjct: 214 FGNTLSVKVMMD-DSGRSRGFGFVNYGNHE 242 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 PYG I AK++ E G S+GFGFV F S E Sbjct: 316 PYGTITSAKVMT--EGGHSKGFGFVCFSSPE 344 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D SRG+GFV F + E+ Sbjct: 122 FGNILSCKVVCDEHG--SRGYGFVHFETHEA 150
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 35.0 bits (79), Expect = 0.043 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + +G I+D ++ D +T RSRGFGF+T+ Sbjct: 45 EKWGNIVDVVVMKDPKTKRSRGFGFITY 72 Score = 34.7 bits (78), Expect = 0.056 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +G+I+ I++D++TG+ RGF F+ F Sbjct: 138 FGQIVSVNIVSDKDTGKKRGFAFIEF 163
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D T RSRGFGFVT+ + E + Sbjct: 34 EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 67 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +I+ DR +G+ RGF FVTF S+ Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSV 158
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + YG+I +I+ DR +G+ RGF FVTF +S+ Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSV 159 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 + +G + D ++ D + RSRGFGFVT+ S + + Sbjct: 35 EQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEV 68
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 35.0 bits (79), Expect = 0.043 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 PYG I AK++ E G+S+GFGFV F + E Sbjct: 343 PYGTITSAKVMRT-ENGKSKGFGFVCFSTPE 372 Score = 33.9 bits (76), Expect = 0.096 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSE 102 +G+IL +KI D E G+S+GFGFV F E Sbjct: 148 FGDILSSKIATD-ENGKSKGFGFVHFEEE 175
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 35.0 bits (79), Expect = 0.043 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGSITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.3 bits (72), Expect = 0.28 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG L K++ D + G+SRGFGFV+F E Sbjct: 214 YGAALSVKVMTD-DHGKSRGFGFVSFERHE 242 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D E G S+G+GFV F ++E+ Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 35.0 bits (79), Expect = 0.043 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGSITSAKVM--LEDGRSKGFGFVCFSSPE 344 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G+ L K++ D G+S+GFGFV++ E Sbjct: 214 FGKTLSVKVMRD-PNGKSKGFGFVSYEKHE 242
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G++L AK+ T +S GFGFV+F SEE + Sbjct: 208 GKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238 Score = 30.8 bits (68), Expect = 0.81 Identities = 14/33 (42%), Positives = 23/33 (69%) Frame = +1 Query: 7 LQPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 ++ +G I A+++ D+ +GRSR FGFVT + E Sbjct: 104 VEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVE 136
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D E+G+S+GFGFV+F E Sbjct: 214 FGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D E+G+S+GFGFV+F E Sbjct: 214 FGPALSVKVMTD-ESGKSKGFGFVSFERHE 242 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D E G S+G+GFV F ++E+ Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D E+G+S+GFGFV+F E Sbjct: 214 FGPALSVKVMTD-ESGKSKGFGFVSFERHE 242 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D E G S+G+GFV F ++E+ Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D E+G+S+GFGFV+F E Sbjct: 214 FGPALSVKVMTD-ESGKSKGFGFVSFERHE 242 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D E G S+G+GFV F ++E+ Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D E+G+S+GFGFV+F E Sbjct: 214 FGPALSVKVMTD-ESGKSKGFGFVSFERHE 242 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D E G S+G+GFV F ++E+ Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 34.7 bits (78), Expect = 0.056 Identities = 12/31 (38%), Positives = 23/31 (74%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YGEI++ ++ D++TG+S+GF F+ + + S Sbjct: 59 YGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 34.7 bits (78), Expect = 0.056 Identities = 12/31 (38%), Positives = 23/31 (74%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YGEI++ ++ D++TG+S+GF F+ + + S Sbjct: 59 YGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G I AK++ E GRS+GFGFV F S E Sbjct: 316 PFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG L K++ D + G+S+GFGFV+F E Sbjct: 214 YGPALSVKVMTD-DNGKSKGFGFVSFERHE 242 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K++ D E G S+G+GFV F ++E+ Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 34.3 bits (77), Expect = 0.074 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G L K++ D +GRSRGFGFV +G+ E Sbjct: 214 FGNTLSVKVMMDN-SGRSRGFGFVNYGNHE 242 Score = 33.1 bits (74), Expect = 0.16 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 PYG I K++ E G S+GFGFV F S E Sbjct: 316 PYGTITSTKVMT--EGGHSKGFGFVCFSSPE 344 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G+IL K++ D E G SRG+GFV F ++E+ Sbjct: 122 FGDILSCKVVCD-EYG-SRGYGFVHFETQEA 150
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 34.3 bits (77), Expect = 0.074 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +G+++D ++ D T RSRGFGF+T+ Sbjct: 55 WGKVVDVVVMRDAATKRSRGFGFITY 80 Score = 33.1 bits (74), Expect = 0.16 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +G ++ K++ D+ TG+ RGF FV F +++ Sbjct: 146 FGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAV 177
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 34.3 bits (77), Expect = 0.074 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K+ D TGRS+G+GFV F EES Sbjct: 159 FGTILSCKVAMD-VTGRSKGYGFVQFEKEES 188 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG + +K++ + + G SRGFGFV + + E Sbjct: 355 YGNVTSSKVMLNPQ-GMSRGFGFVAYSNPE 383
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +GE+L ++ D +TG S+GFGFV F E+ Sbjct: 127 FGEVLMVQVKKDLKTGHSKGFGFVRFTEYET 157
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +GE+L ++ D +TG S+GFGFV F E+ Sbjct: 127 FGEVLMVQVKKDLKTGHSKGFGFVRFTEYET 157
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFV 87 YG + ++ DRETGR RGFGFV Sbjct: 24 YGSVKRVQLPTDRETGRMRGFGFV 47
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 33.9 bits (76), Expect = 0.096 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G + A+II D+++G+ RGFGFV F + ++ Sbjct: 121 FGTVEKAEIIADKQSGKKRGFGFVYFQNHDA 151 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 1 GRLQPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 G + +G + D ++ + +T RSR FGFVT+ + E Sbjct: 25 GHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVE 59
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 33.9 bits (76), Expect = 0.096 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G + + K+I D T + +GFGFVT + E Sbjct: 266 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYE 296 Score = 30.8 bits (68), Expect = 0.81 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GE+ AK+I D+ G S G+GFV + Sbjct: 44 GEVESAKLIRDKVAGHSLGYGFVNY 68
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 33.9 bits (76), Expect = 0.096 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G + + K+I D T + +GFGFVT + E Sbjct: 266 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYE 296 Score = 30.8 bits (68), Expect = 0.81 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GE+ AK+I D+ G S G+GFV + Sbjct: 44 GEVESAKLIRDKVAGHSLGYGFVNY 68
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 33.5 bits (75), Expect = 0.13 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 PYGE+ + + D TG S+GF +V F E Sbjct: 347 PYGELKEVHVAVDTRTGNSKGFAYVLFAKPE 377
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I D I+ D+++ RSRGF FV F Sbjct: 141 YGPIADVSIVYDQQSRRSRGFAFVYF 166
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I D I+ D+++ RSRGF FV F Sbjct: 141 YGPIADVSIVYDQQSRRSRGFAFVYF 166
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I D I+ D+++ RSRGF FV F Sbjct: 141 YGPIADVSIVYDQQSRRSRGFAFVYF 166
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 33.1 bits (74), Expect = 0.16 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 299 PFGAVTNVKVIRDFNTNKCKGFGFVT 324 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILVDQVTGISRGVGFIRF 173 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 63 GEIESCKLVRDKITGQSLGYGFVNY 87
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII DR TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITDR-TGVSKGYGFVSF 87
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + YG + + KII DR TG S+G+GFV+F Sbjct: 57 EQYGTVKEVKIITDR-TGVSKGYGFVSF 83
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII DR TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITDR-TGVSKGYGFVSF 87
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 33.1 bits (74), Expect = 0.16 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 298 PFGAVTNVKVIRDFNTNKCKGFGFVT 323 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILVDQVTGISRGVGFIRF 173 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 63 GEIESCKLVRDKITGQSLGYGFVNY 87
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 33.1 bits (74), Expect = 0.16 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 298 PFGAVTNVKVIRDFNTNKCKGFGFVT 323 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILVDQVTGISRGVGFIRF 173 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 63 GEIESCKLVRDKITGQSLGYGFVNY 87
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 33.1 bits (74), Expect = 0.16 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 298 PFGAVTNVKVIRDFNTNKCKGFGFVT 323 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILVDQVTGISRGVGFIRF 173 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 63 GEIESCKLVRDKITGQSLGYGFVNY 87
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII DR TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITDR-TGVSKGYGFVSF 87
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII DR TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITDR-TGVSKGYGFVSF 87
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + ++ D+ TGRSRGF FV F Sbjct: 140 YGPLSGVNVVYDQRTGRSRGFAFVYF 165
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + ++ D+ TGRSRGF FV F Sbjct: 142 YGPLSGVNVVYDQRTGRSRGFAFVYF 167
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 32.7 bits (73), Expect = 0.21 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG + KII DR G S+G+GFVTF +E+ Sbjct: 56 YGTVKSTKIIVDR-AGVSKGYGFVTFETEQ 84
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 32.7 bits (73), Expect = 0.21 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSE 102 G I +I+ D +TG S G+GFV FGSE Sbjct: 102 GPINTCRIMRDYKTGYSYGYGFVDFGSE 129
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 PYGE+ + I D TG+S+GF +V F + ++ Sbjct: 352 PYGELEEVHIAVDTRTGQSKGFAYVLFKNADN 383
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 PYGE+ + + D TG+S+GF +V F E Sbjct: 323 PYGELEEVHVAVDTRTGQSKGFAYVLFKDPE 353
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 32.7 bits (73), Expect = 0.21 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 306 PFGAVTNVKVIRDFTTNKCKGFGFVT 331 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILLDQATGVSRGVGFIRF 173 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 G+I K++ D+ TG+S G+GFV + Sbjct: 63 GDIESCKLVRDKITGQSLGYGFVNY 87
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 32.7 bits (73), Expect = 0.21 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 306 PFGAVTNVKVIRDFTTNKCKGFGFVT 331 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILVDQVTGVSRGVGFIRF 173 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 G+I K++ D+ TG+S G+GFV + Sbjct: 63 GDIESCKLVRDKITGQSLGYGFVNY 87
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 32.7 bits (73), Expect = 0.21 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG I+ I+ D+ TGR RG FV F E Sbjct: 211 YGNIVQKNILRDKLTGRPRGVAFVRFNKRE 240
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 32.3 bits (72), Expect = 0.28 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 324 PFGAVNNVKVIRDFNTNKCKGFGFVT 349 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 160 YGRIITSRILVDQVTGVSRGVGFIRF 185 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 75 GEIESCKLVRDKITGQSLGYGFVNY 99
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 Y AKI++D+ TG S+G+GFV F + + Sbjct: 187 YASTSHAKIVHDQVTGMSKGYGFVKFTNSD 216
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 32.3 bits (72), Expect = 0.28 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 312 PFGAVNNVKVIRDFNTNKCKGFGFVT 337 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 148 YGRIITSRILVDQVTGVSRGVGFIRF 173 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 63 GEIESCKLVRDKITGQSLGYGFVNY 87
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 32.3 bits (72), Expect = 0.28 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + + K+I D T + +GFGFVT Sbjct: 319 PFGAVNNVKVIRDFNTNKCKGFGFVT 344 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG I+ ++I+ D+ TG SRG GF+ F Sbjct: 155 YGRIITSRILVDQVTGVSRGVGFIRF 180 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 GEI K++ D+ TG+S G+GFV + Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNY 94
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 32.3 bits (72), Expect = 0.28 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 P+G ++ AK+ D++T S+ FGFV++ + S Sbjct: 423 PFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVS 454
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 32.3 bits (72), Expect = 0.28 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 P+G ++ AK+ D++T S+ FGFV++ + S Sbjct: 423 PFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVS 454
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G + DA+I+ D+ +GRS+G +V F E+S+ Sbjct: 264 GPVRDAQIVRDKISGRSKGVAYVEFCHEDSV 294
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 32.0 bits (71), Expect = 0.37 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G ++ +++ DRETG+ +G+GF + +E+ Sbjct: 40 GSVVSFRLVYDRETGKPKGYGFCEYQDQET 69
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 32.0 bits (71), Expect = 0.37 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G ++ +++ DRETG+ +G+GF + +E+ Sbjct: 40 GSVVSFRLVYDRETGKPKGYGFCEYQDQET 69
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF--GSEESM 111 YG IL K+I D+ G G+GF+++ GS+ S+ Sbjct: 218 YGPILSMKLIYDKTKGEPNGYGFISYPLGSQASL 251 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 31 DAKIINDRETGRSRGFGFVTFGS 99 D+ ND G SRG+GFV+F S Sbjct: 587 DSSSDNDLPVGSSRGYGFVSFES 609
>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 32.0 bits (71), Expect = 0.37 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 4 RLQPYGEILDAKIINDRETGRSRGFGFVTF 93 R P+G+I D ++ D+ T S+G FV F Sbjct: 44 RFSPFGDIQDIWVVRDKHTKESKGIAFVKF 73 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 4 RLQPYGEILDAKIINDRETGRSRGFGFVTF 93 + + YG+I II ++ TG S+G G+V + Sbjct: 139 KFKVYGDIEYCSIIKNKVTGESKGLGYVRY 168
>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I| Length = 219 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 Y ++ K++ DRE G++RGFGFV+F Sbjct: 53 YPSLVKTKVVRDRE-GKTRGFGFVSF 77
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 31.6 bits (70), Expect = 0.48 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + +G++L ++ ++TG S+G+GFV F +E Sbjct: 66 EQFGKVLRLRVSRSKKTGGSKGYGFVEFECDE 97
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 31.6 bits (70), Expect = 0.48 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G ++ +++ DRETG+ +G+GF + +E+ Sbjct: 40 GPVVSFRLVYDRETGKPKGYGFCEYQDQET 69
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 31.6 bits (70), Expect = 0.48 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G ++ +++ DRETG+ +G+GF + +E+ Sbjct: 40 GPVVSFRLVYDRETGKPKGYGFCEYQDQET 69
>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 31.6 bits (70), Expect = 0.48 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 4 RLQPYGEILDAKIINDRETGRSRGFGFVTF 93 R P+G+I D ++ D+ T S+G FV F Sbjct: 44 RFSPFGDIQDIWVVRDKHTKESKGVAFVKF 73 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 4 RLQPYGEILDAKIINDRETGRSRGFGFVTF 93 + + YG+I II ++ TG S+G G+V + Sbjct: 139 KFKVYGDIEYCSIIKNKVTGESKGLGYVRY 168
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 31.6 bits (70), Expect = 0.48 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G+I D +I D ET + RGF FV F Sbjct: 28 PFGDITDIQIPLDYETEKHRGFAFVEF 54
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 31.6 bits (70), Expect = 0.48 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G+I D +I D ET + RGF FV F Sbjct: 28 PFGDITDIQIPLDYETEKHRGFAFVEF 54
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 31.6 bits (70), Expect = 0.48 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G ++ +++ DRETG+ +G+GF + +E+ Sbjct: 40 GPVVSFRLVYDRETGKPKGYGFCEYQDQET 69
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 31.6 bits (70), Expect = 0.48 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G ++ +++ DRETG+ +G+GF + +E+ Sbjct: 40 GPVVSFRLVYDRETGKPKGYGFCEYQDQET 69
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 31.6 bits (70), Expect = 0.48 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +P+G I + D+ TG+S+GF F++F E Sbjct: 260 RPFGSISRIYLAKDKTTGQSKGFAFISFHRRE 291
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 31.6 bits (70), Expect = 0.48 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +P+G I + D+ TG+S+GF F++F E Sbjct: 260 RPFGSISRIYLAKDKTTGQSKGFAFISFHRRE 291
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 31.6 bits (70), Expect = 0.48 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG I+ I+ D+ TG+ RG FV F E Sbjct: 194 YGNIVQKNILRDKLTGKPRGVAFVRFNKRE 223
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 31.6 bits (70), Expect = 0.48 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G I+ +I+ D+ TG +GFG+V F + +S+ Sbjct: 311 GSIMAVRIVRDKMTGIGKGFGYVLFENTDSV 341
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 31.6 bits (70), Expect = 0.48 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G I AKI+ D E G+S+GFGFV + + E Sbjct: 387 FGTITSAKIMTD-EQGKSKGFGFVCYTTPE 415 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GEI ++ D + + RGFGFV + + E Sbjct: 284 FGEITSLSLVKD-QNDKPRGFGFVNYANHE 312
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 31.6 bits (70), Expect = 0.48 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG I+ I+ D+ TGR RG FV + E Sbjct: 236 YGSIVQKNILRDKLTGRPRGVAFVRYNKRE 265
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 31.6 bits (70), Expect = 0.48 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG I+ I+ D+ TGR RG FV + E Sbjct: 234 YGSIVQKNILRDKLTGRPRGVAFVRYNKRE 263
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 G ++ A++I +R T RSRG+G+V F Sbjct: 192 GGVIGARVIYERGTDRSRGYGYVDF 216 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GE++ +I ET + +GFG+V F + E Sbjct: 290 HGEVVSVRIPTHPETEQPKGFGYVQFSNME 319
>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4| Length = 579 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 228 YGSVKEVKIITNR-TGVSKGYGFVSF 252 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITNR-TGVSKGYGFVSF 87
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 Y AKII D TG SR +GFV F SE+ Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEK 235
>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1| Length = 744 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 393 YGSVKEVKIITNR-TGVSKGYGFVSF 417 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 228 YGSVKEVKIITNR-TGVSKGYGFVSF 252 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITNR-TGVSKGYGFVSF 87
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G +++ K++ D +TGRS+G+ F+ F ES Sbjct: 42 GPVINLKMMFDPQTGRSKGYAFIEFRDLES 71
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 31.2 bits (69), Expect = 0.62 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G IL K+ D GRS+G+GFV F EE+ Sbjct: 155 FGTILSCKVAMD-VVGRSKGYGFVQFEKEET 184 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG + K++ + + G SRGFGFV + + E Sbjct: 351 YGNVTSCKVMMNSQ-GLSRGFGFVAYSNPE 379
>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3| Length = 486 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITNR-TGVSKGYGFVSF 87
>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2| Length = 558 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG + + KII +R TG S+G+GFV+F Sbjct: 63 YGSVKEVKIITNR-TGVSKGYGFVSF 87
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 30.8 bits (68), Expect = 0.81 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I A ++ D E G+S+GFGFV F Sbjct: 238 YGKITSAVVMKDGE-GKSKGFGFVNF 262 Score = 30.8 bits (68), Expect = 0.81 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G I+ K+ D +G+S+G+GFV + +EES Sbjct: 147 FGNIVSCKVAVD-SSGQSKGYGFVQYANEES 176 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G + +K++ D G S+G GFV F + E Sbjct: 340 PFGTVTSSKVMRD-PNGTSKGSGFVAFATPE 369
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 30.8 bits (68), Expect = 0.81 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G +++ + DR TG+ +G+GFV F SEE Sbjct: 37 GPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +1 Query: 16 YGEILDA-KIINDRETGRSRGFGFVTFGS 99 +G IL KI+ D +TG S+G+ F+ F S Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFAS 151
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 30.8 bits (68), Expect = 0.81 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG I+ I+ D+ TG+ RG FV F E Sbjct: 219 YGMIVQKNILRDKLTGKPRGVAFVRFNKRE 248
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 30.8 bits (68), Expect = 0.81 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSE 102 Y AKI+ D +T SRG+GFV F E Sbjct: 210 YNSCKSAKIMTDPQTNVSRGYGFVRFTDE 238
>HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2 (Fragment)| Length = 225 Score = 30.8 bits (68), Expect = 0.81 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GE+ ++ D +T + RGF F+TF EE Sbjct: 195 FGEVESIELPMDNKTNKRRGFCFITFNQEE 224
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 28 LDAKIINDRETGRSRGFGFVTFGSEE 105 L ++ D +TG SRG+GFV+F S++ Sbjct: 188 LSGHVMWDMQTGSSRGYGFVSFTSQD 213
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+GE+ + + D TG+S+GF +V F Sbjct: 367 PFGELEEVHVALDTRTGQSKGFAYVLF 393
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -2 Query: 373 DDRPTD*KIRHVVSSSRNTETTRARDQKHHRTGQ 272 DDR D + R S SR+ R+RD++HHR + Sbjct: 4 DDRERDRERRRHRSRSRDRHRERSRDRRHHRNSR 37
>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1| Length = 476 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTF 93 P+G+I D ++ D+ T S+G FV F Sbjct: 47 PFGDIQDIWVVRDKHTKESKGIAFVKF 73 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +1 Query: 4 RLQPYGEILDAKIINDRETGRSRGFGFVTF 93 + + YG+I +I ++ TG S+G G+V + Sbjct: 139 KFKVYGDIEYCSVIKNKVTGESKGLGYVRY 168
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + YG + D I DR T SRGF FV F Sbjct: 34 EKYGRVGDVYIPRDRYTKESRGFAFVRF 61
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + YG + D I DR T SRGF FV F Sbjct: 34 EKYGRVGDVYIPRDRYTKESRGFAFVRF 61
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + YG + D I DR T SRGF FV F Sbjct: 34 EKYGRVGDVYIPRDRYTKESRGFAFVRF 61
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + YG + D I DR T SRGF FV F Sbjct: 34 EKYGRVGDVYIPRDRYTKESRGFAFVRF 61
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVTFGSEE 105 P+G+I D ++ D E+ R RGF F+ + E Sbjct: 28 PFGDIADIQMPADYESQRHRGFAFIEYEQSE 58
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G I D +++ D TG +RG+ FVTF ++E+ Sbjct: 96 GPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 125
>HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP| core protein C) (Fragment) Length = 158 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +GE+ ++ D +T + RGF F+TF EE Sbjct: 57 FGEVESIELPMDNKTNKRRGFCFITFKEEE 86
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G I D +++ D TG +RG+ FVTF ++E+ Sbjct: 186 GPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 215
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G I D +++ D TG +RG+ FVTF ++E+ Sbjct: 186 GPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 215
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTF 93 + YG + D I DR T SRGF FV F Sbjct: 35 EKYGRVGDVYIPRDRYTKESRGFAFVRF 62
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 YG I +I+D+E+G+ +G+ F+ + E M Sbjct: 125 YGPIKKIVLIHDQESGKPKGYAFIEYEHERDM 156
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 YG+I D I D+ + +S+GFGFV F Sbjct: 42 YGDIGDVHIPRDKYSRQSKGFGFVRF 67
>K0256_MOUSE (Q6A098) Protein KIAA0256| Length = 1086 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -2 Query: 343 HVVSSSRNTETTRARDQKHHRTGQTHKHDSD*HTEDR*LADEDG 212 H SS R + +D KH + Q+H+ SD ++E DEDG Sbjct: 352 HSTSSERRQNLQKRQDNKHLNSTQSHR--SDPNSESLYFEDEDG 393
>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6| Length = 552 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 22 EILDAKIINDRETGRSRGFGFVTFGSEES 108 +IL+ K +R G+S+GF V GSE S Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136
>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 22 EILDAKIINDRETGRSRGFGFVTFGSEES 108 +IL+ K +R G+S+GF V GSE S Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136
>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6| (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68-kDa subunit) (Protein HPBRII-4/7) Length = 551 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 22 EILDAKIINDRETGRSRGFGFVTFGSEES 108 +IL+ K +R G+S+GF V GSE S Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136
>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 22 EILDAKIINDRETGRSRGFGFVTFGSEES 108 +IL+ K +R G+S+GF V GSE S Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 + + +++ D TG SR FGFV FG E+ Sbjct: 216 FKSVKTVRVMTDPLTGSSRCFGFVRFGDED 245
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 16 YGEILDA-KIINDRETGRSRGFGFVTFGSEES 108 +G IL KI+ D ++G S+GF F+ F S E+ Sbjct: 123 FGVILQVPKIMRDVDSGTSKGFAFINFASFEA 154 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G ++ + DR T +GFGFV F EE Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEE 65
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 +G I+ K+ E G+SRG+GFV F E++ Sbjct: 135 FGNIVSCKVAT-LEDGKSRGYGFVQFEQEDA 164 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G I K++ D E G+S+GFGFV F + E Sbjct: 328 GTITSTKLMCD-EKGKSKGFGFVCFSTPE 355
>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10)| (S1-1 protein) Length = 852 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = +1 Query: 1 GRLQPYG-EILDAKIINDRETGRSRGFGFVTF 93 G+LQ +G + + +++ ++ +G+SRGF FV F Sbjct: 70 GQLQSHGVQAREVRLMRNKSSGQSRGFAFVEF 101
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + KI+ D T + +G+GFV+ Sbjct: 460 PFGAVQSVKIVKDPTTNQCKGYGFVS 485
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +G I + D+ETGR++GF FV++ Sbjct: 225 FGGIQRVYLAKDKETGRAKGFAFVSY 250
>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)| (DXS8237E) Length = 929 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = +1 Query: 1 GRLQPYG-EILDAKIINDRETGRSRGFGFVTF 93 G+LQ +G + + +++ ++ +G+SRGF FV F Sbjct: 147 GQLQSHGVQAREVRLMRNKSSGQSRGFAFVEF 178
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 13 PYGEILDAKIINDRETGRSRGFGFVT 90 P+G + KI+ D T + +G+GFV+ Sbjct: 424 PFGAVQSVKIVKDPTTNQCKGYGFVS 449
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G+++ A + E GRS+G+GFV++ S E+ Sbjct: 123 GQLVKAPQVARDENGRSKGYGFVSYDSFET 152
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = +1 Query: 16 YGE-ILDAKIINDRETGRSRGFGFVTFGSEESMXXXXXXX---XXXXPVEVLSAGPR 174 +GE + +++ D T RSRGFG+V F + +++ PV + A PR Sbjct: 114 FGEGVTSIRLVIDPLTERSRGFGYVEFETADTLSAALALSGEDLMGRPVRITVAEPR 170
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = +1 Query: 16 YGEILDAKII-NDRETGRSRGFGFVTF 93 +G+ILD +II N+R S+GFGFVTF Sbjct: 140 FGKILDVEIIFNERG---SKGFGFVTF 163
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = +1 Query: 16 YGEILDAKII-NDRETGRSRGFGFVTF 93 +G+ILD +II N+R S+GFGFVTF Sbjct: 144 FGKILDVEIIFNERG---SKGFGFVTF 167
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 28.9 bits (63), Expect = 3.1 Identities = 9/30 (30%), Positives = 22/30 (73%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G++ + ++ +++TG SR +GF+ F ++E Sbjct: 114 FGDLKEVRLARNKKTGNSRHYGFLEFVNKE 143
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = +1 Query: 16 YGEILDAKII-NDRETGRSRGFGFVTF 93 +G+ILD +II N+R S+GFGFVTF Sbjct: 139 FGKILDVEIIFNERG---SKGFGFVTF 162
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YG K+I D +G+S+GFGFV + + E+ Sbjct: 222 YGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YG K+I D +G+S+GFGFV + + E+ Sbjct: 222 YGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YG K+I D +G+S+GFGFV + + E+ Sbjct: 222 YGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YG K+I D +G+S+GFGFV + + E+ Sbjct: 222 YGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YG K+I D +G+S+GFGFV + + E+ Sbjct: 222 YGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEES 108 YG K+I D +G+S+GFGFV + + E+ Sbjct: 222 YGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251
>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (mNIFK) Length = 317 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G+I ++ + TG S+G+ FV F SE+ Sbjct: 70 FGDISRFRLSRSKRTGNSKGYAFVEFESED 99
>LACA_LACLA (P23494) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 141 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/50 (26%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + +G + G V ++ +TRG NN ++VG +VGD Sbjct: 61 IDAYGAGPFMVATKIKGMVAAEVSDERSAYMTRGHNNARMITVGAEIVGD 110
>K0256_HUMAN (Q93073) Protein KIAA0256| Length = 1101 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2 Query: 343 HVVSSSRNTETTRARDQKHHRTGQTHKHDSD*HTEDR*LADEDG 212 H SS R + D KH + Q+H+ SD ++E DEDG Sbjct: 353 HSTSSERRQNLQKRPDNKHLSSSQSHR--SDPNSESLYFEDEDG 394
>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6| Length = 545 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 22 EILDAKIINDRETGRSRGFGFVTFGSEES 108 ++L+ K +R G+S+GF V GS+ S Sbjct: 108 DVLEIKFFENRANGQSKGFALVCVGSDSS 136
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEES 108 G I D +++ D +G++RG+ F+TF +E+ Sbjct: 189 GPIWDLRLMMDPLSGQNRGYAFITFCGKEA 218
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +GEI +I+ D+ T +S+G+ F+ F Sbjct: 130 FGEIEKIRIVKDKITQKSKGYAFIVF 155
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTF 93 +G I + +I DR T +SRGF F+TF Sbjct: 31 HGPISEVLLIKDR-TSKSRGFAFITF 55
>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) Length = 915 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG+++ AK++ + + +R +GFVT + E Sbjct: 429 YGKVVGAKVVTNARSPGARCYGFVTMSTAE 458
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG+++ AK++ + + +R +GFVT + E Sbjct: 451 YGKVVGAKVVTNARSPGARCYGFVTMSTAE 480
>NOP12_YEAST (Q08208) Nucleolar protein 12| Length = 459 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +P G+I +II D +T +GF +V F +S+ Sbjct: 300 EPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSV 333
>FTHS_PICTO (Q6KZM3) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 535 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -3 Query: 276 DRHTNTTQTDTPKIDNLLTK-----TVDDRWMDG*LGDETGSGAQDL 151 +RH+N T + I N+LTK ++ D + DG G GA DL Sbjct: 361 NRHSNDTDAEINAISNILTKNGVEFSISDAYSDG------GHGALDL 401
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 +G + +I+ + T SRGFGF++F + E Sbjct: 124 FGTVTHVRIMREPVTKASRGFGFLSFSTVE 153
>NOP12_KLULA (Q6CKV6) Nucleolar protein 12| Length = 524 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 10 QPYGEILDAKIINDRETGRSRGFGFVTFGSEESM 111 +P G+I +II D +T +GF +V F +S+ Sbjct: 380 EPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSV 413
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEE 105 G ++ I D+ TG +GF FVTF S + Sbjct: 200 GRVIRIFIARDKVTGLPKGFAFVTFESRD 228
>LACA_STAAW (P65252) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>LACA_STAAU (P26594) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGTGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>LACA_STAAS (Q6G7B9) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>LACA_STAAR (Q6GEN4) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>LACA_STAAN (P65251) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>LACA_STAAM (P65250) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>LACA_STAAC (Q5HE10) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + FG + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGD 111
>U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 auxiliary factor| 59 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF59) Length = 517 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 7 LQPYGEILDAKIINDRETGRSRGFGFVTF 93 L+P+G++L ++I + G S+GF F F Sbjct: 330 LKPFGDLLSFQLIKNIADGSSKGFCFCEF 358
>RAVR1_HUMAN (Q8IY67) Protein raver-1| Length = 606 Score = 27.7 bits (60), Expect = 6.9 Identities = 9/34 (26%), Positives = 21/34 (61%) Frame = +1 Query: 7 LQPYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 ++P+G + ++ TG+S+G+GF + ++S Sbjct: 152 VRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDS 185
>LACA_STRMU (P26423) Galactose-6-phosphate isomerase subunit lacA (EC 5.3.1.26)| Length = 142 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/50 (22%), Positives = 22/50 (44%) Frame = +2 Query: 230 LSIFGXXXXXXXXCLSGPVVFLIASSSGLCVTRGRNNMSYLSVGRSVVGD 379 + +G + G + ++ +TRG NN +++G +VGD Sbjct: 62 IDAYGAGSFMVATKVKGMIAAEVSDERSAYMTRGHNNARIITLGAEIVGD 111
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = +1 Query: 16 YGEILDAKIINDRETGRSRGFGFVTFGSEE 105 YG+++ AK++ + + +R +GFVT + + Sbjct: 430 YGKVVGAKVVTNARSPGARCYGFVTMSTSD 459
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTF 93 G+I +++ +TG+ +GFGFV F Sbjct: 252 GQIRRVRLMTFEDTGKCKGFGFVDF 276
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G I+ +I+ + TG RGFG+V F + +++ Sbjct: 309 GSIVAVRIVRNPLTGVGRGFGYVLFENTDAV 339
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +1 Query: 19 GEILDAKIINDRETGRSRGFGFVTFGSEESM 111 G I+ +I+ + TG RGFG+V F + +++ Sbjct: 315 GSIVAVRIVRNPLTGVGRGFGYVLFENTDAV 345
>RAVR1_RAT (Q5XI28) Protein raver-1| Length = 748 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/34 (26%), Positives = 20/34 (58%) Frame = +1 Query: 7 LQPYGEILDAKIINDRETGRSRGFGFVTFGSEES 108 ++P+G + ++ TG S+G+GF + ++S Sbjct: 152 VRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDS 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,814,801 Number of Sequences: 219361 Number of extensions: 565086 Number of successful extensions: 1894 Number of sequences better than 10.0: 254 Number of HSP's better than 10.0 without gapping: 1729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1888 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
