ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdh15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464059.1| Oryza sativa (japonica cultivar-group), mRNA 268 2e-68
2dbj|AK073353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
4dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
5dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6ref|NM_202999.2| Arabidopsis thaliana unknown protein AT5G04090 ... 82 2e-12
7gb|BT015671.1| Arabidopsis thaliana At5g04090 gene, complete cds 82 2e-12
8gb|BT015375.1| Arabidopsis thaliana At5g04090 mRNA, complete cds 82 2e-12
9emb|BX830728.1|CNS0A0SF Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
10ref|NM_120491.3| Arabidopsis thaliana unknown protein AT5G04090 ... 64 5e-07
11emb|BX830762.1|CNS0A0T9 Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
12emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BA... 62 2e-06
13emb|AL162873.1|ATF8F6 Arabidopsis thaliana DNA chromosome 5, BAC... 62 2e-06
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
15dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
16dbj|AK121711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
17dbj|AK064803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
18gb|AY107192.1| Zea mays PCO124577 mRNA sequence 54 5e-04
19gb|BT024013.1| Zea mays clone EL01N0401G10 mRNA sequence 52 0.002
20ref|NM_188492.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
22dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
23dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
24ref|XM_324255.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.12
25ref|XM_953315.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.12
26ref|NM_202542.1| Arabidopsis thaliana unknown protein AT3G10250 ... 44 0.46
27ref|NM_111860.3| Arabidopsis thaliana unknown protein AT3G10250 ... 44 0.46
28gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 44 0.46
29gb|AY079118.1| Arabidopsis thaliana AT3g10250/F14P13_15 mRNA, co... 44 0.46
30gb|AY054259.1| Arabidopsis thaliana AT3g10250/F14P13_15 mRNA, co... 44 0.46
31emb|BX822965.1|CNS0A7AK Arabidopsis thaliana Full-length cDNA Co... 44 0.46
32emb|BX824110.1|CNS0A6PX Arabidopsis thaliana Full-length cDNA Co... 44 0.46
33emb|BX824987.1|CNS0A4XD Arabidopsis thaliana Full-length cDNA Co... 44 0.46
34gb|AY084385.1| Arabidopsis thaliana clone 106330 mRNA, complete ... 44 0.46
35gb|AC153798.1| Mus musculus BAC RP23-262P15 (Roswell Park Cance... 42 1.8
36ref|XM_630927.1| Dictyostelium discoideum Rab GTPase (DDB0229409... 42 1.8
37gb|AC107669.7| Mus musculus chromosome 10, clone RP23-144A12, co... 42 1.8
38gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, comple... 42 1.8
39gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 42 1.8
40gb|AC024361.21| Homo sapiens chromosome 17, clone RP11-388C12, c... 42 1.8
41gb|AC068014.16| Homo sapiens chromosome 17, clone RP11-567O16, c... 42 1.8
42gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome... 42 1.8
43gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete... 40 7.2
44ref|NM_197348.1| Oryza sativa (japonica cultivar-group) putative... 40 7.2
45gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
46gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, com... 40 7.2
47gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, comp... 40 7.2
48gb|AC140247.3| Mus musculus BAC clone RP23-469I15 from chromosom... 40 7.2
49gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosom... 40 7.2
50gb|AC115359.5| Mus musculus BAC clone RP23-190K20 from chromosom... 40 7.2
51gb|BT014437.1| Lycopersicon esculentum clone 133759F, mRNA sequence 40 7.2
52gb|BT022197.1| Drosophila melanogaster IP01109 full insert cDNA 40 7.2
53gb|AC114819.4| Mus musculus BAC clone RP23-52J20 from chromosome... 40 7.2
54gb|AC127274.4| Mus musculus BAC clone RP24-156G13 from chromosom... 40 7.2
55gb|AC121922.3| Mus musculus BAC clone RP24-198H19 from chromosom... 40 7.2
56gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complet... 40 7.2
57ref|XM_659894.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.2
58emb|AL390774.10| Human DNA sequence from clone RP11-417B4 on chr... 40 7.2
59emb|AL049691.18|HSJ1123D4 Human DNA sequence from clone RP5-1123... 40 7.2
60gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map... 40 7.2
61emb|AL670939.6| Mouse DNA sequence from clone RP23-59O12 on chro... 40 7.2
62gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 7.2
63ref|NM_079199.2| Drosophila melanogaster Transcription factor II... 40 7.2
64gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chro... 40 7.2
65gb|AC157477.2| Mus musculus BAC clone RP24-141A7 from chromosome... 40 7.2
66dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
67dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
68gb|AC157654.2| Mus musculus BAC clone RP24-286J10 from chromosom... 40 7.2
69gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, part... 40 7.2
70gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone... 40 7.2
71emb|AL928915.24| Mouse DNA sequence from clone RP23-276J8 on chr... 40 7.2
72gb|AC151355.2| Xenopus tropicalis clone ISB-52K19, complete sequ... 40 7.2
73gb|U72893.1|DMU72893 Drosophila melanogaster TFIIE small subunit... 40 7.2
74emb|BX842684.4| Zebrafish DNA sequence from clone DKEY-33I22 in ... 40 7.2
75gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14... 40 7.2
76gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
77emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on ch... 40 7.2
78emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on ch... 40 7.2
79emb|AL672128.8| Mouse DNA sequence from clone RP23-153G22 on chr... 40 7.2 
>ref|XM_464059.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1722

 Score =  268 bits (135), Expect = 2e-68
 Identities = 210/235 (89%)
 Strand = Plus / Plus

                                                                       
Query: 126 cgcaaggtgtctcgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcag 185
           |||||||| |||||| ||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 279 cgcaaggtttctcgccaggacatacagctcgtccagaatcttattgaacgatgtcttcag 338

                                                                       
Query: 186 ctttacatgaaccagaaagaagtggttggaactctatctttccaggcgaaaatagaaccc 245
           ||||| ||||||||||||||||||||||  || ||||| |||||||||||||| ||||| 
Sbjct: 339 ctttatatgaaccagaaagaagtggttgagaccctatcattccaggcgaaaattgaacct 398

                                                                       
Query: 246 agctttactgaactcgtctggcagaaacttgaagaagagaaccctgagttttttaaggca 305
           || |||||||| || ||||||||||||||||| |||||||| | |||||| ||||| |||
Sbjct: 399 agttttactgagcttgtctggcagaaacttgaggaagagaatcgtgagttctttaaagca 458

                                                                  
Query: 306 tattatgtgaggttgatgcttaagaatcaaatattggtattcaacaagctccttg 360
           |||||||||||  | |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 459 tattatgtgagacttatgcttaagaatcaaataatggtcttcaacaagctccttg 513



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 74/85 (87%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                       
Query: 442 gcacattgaaccaaaatacatgttttttacaagacactact---agcactgcaattccag 498
           |||||||||| |||||| |||| ||||| | ||||||||||   ||||||||||| ||||
Sbjct: 595 gcacattgaatcaaaatgcatgctttttgccagacactactcccagcactgcaatgccag 654

                                    
Query: 499 atagctttctacacaatggaagttc 523
           ||||||| |||| ||||||||||||
Sbjct: 655 atagcttgctacccaatggaagttc 679
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>dbj|AK073353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025E21, full
           insert sequence
          Length = 1721

 Score =  268 bits (135), Expect = 2e-68
 Identities = 210/235 (89%)
 Strand = Plus / Plus

                                                                       
Query: 126 cgcaaggtgtctcgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcag 185
           |||||||| |||||| ||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 278 cgcaaggtttctcgccaggacatacagctcgtccagaatcttattgaacgatgtcttcag 337

                                                                       
Query: 186 ctttacatgaaccagaaagaagtggttggaactctatctttccaggcgaaaatagaaccc 245
           ||||| ||||||||||||||||||||||  || ||||| |||||||||||||| ||||| 
Sbjct: 338 ctttatatgaaccagaaagaagtggttgagaccctatcattccaggcgaaaattgaacct 397

                                                                       
Query: 246 agctttactgaactcgtctggcagaaacttgaagaagagaaccctgagttttttaaggca 305
           || |||||||| || ||||||||||||||||| |||||||| | |||||| ||||| |||
Sbjct: 398 agttttactgagcttgtctggcagaaacttgaggaagagaatcgtgagttctttaaagca 457

                                                                  
Query: 306 tattatgtgaggttgatgcttaagaatcaaatattggtattcaacaagctccttg 360
           |||||||||||  | |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 458 tattatgtgagacttatgcttaagaatcaaataatggtcttcaacaagctccttg 512



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 74/85 (87%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                       
Query: 442 gcacattgaaccaaaatacatgttttttacaagacactact---agcactgcaattccag 498
           |||||||||| |||||| |||| ||||| | ||||||||||   ||||||||||| ||||
Sbjct: 594 gcacattgaatcaaaatgcatgctttttgccagacactactcccagcactgcaatgccag 653

                                    
Query: 499 atagctttctacacaatggaagttc 523
           ||||||| |||| ||||||||||||
Sbjct: 654 atagcttgctacccaatggaagttc 678
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                           
Query: 261     gtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgaggttg 320
               ||||||||||||||||| |||||||| | |||||| ||||| ||||||||||||||  | 
Sbjct: 1969784 gtctggcagaaacttgaggaagagaatcgtgagttctttaaagcatattatgtgagactt 1969843

                                                       
Query: 321     atgcttaagaatcaaatattggtattcaacaagctccttg 360
               |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1969844 atgcttaagaatcaaataatggtcttcaacaagctccttg 1969883



 Score =  113 bits (57), Expect = 6e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                           
Query: 156     gtccagaatctcatcgaacgttgtcttcagctttacatgaaccagaaagaagtggttgga 215
               ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||  
Sbjct: 1969379 gtccagaatcttattgaacgatgtcttcagctttatatgaaccagaaagaagtggttgag 1969438

                                                        
Query: 216     actctatctttccaggcgaaaatagaacccagctttactga 256
               || ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 1969439 accctatcattccaggcgaaaattgaacctagttttactga 1969479



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 68/79 (86%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                           
Query: 448     tgaaccaaaatacatgttttttacaagacactact---agcactgcaattccagatagct 504
               |||| |||||| |||| ||||| | ||||||||||   ||||||||||| ||||||||||
Sbjct: 1970535 tgaatcaaaatgcatgctttttgccagacactactcccagcactgcaatgccagatagct 1970594

                                  
Query: 505     ttctacacaatggaagttc 523
               | |||| ||||||||||||
Sbjct: 1970595 tgctacccaatggaagttc 1970613



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 126     cgcaaggtgtctcgcgaggacatacagctcgt 157
               |||||||| |||||| ||||||||||||||||
Sbjct: 1968183 cgcaaggtttctcgccaggacatacagctcgt 1968214
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>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0026E05
          Length = 159860

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                         
Query: 261   gtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgaggttg 320
             ||||||||||||||||| |||||||| | |||||| ||||| ||||||||||||||  | 
Sbjct: 19992 gtctggcagaaacttgaggaagagaatcgtgagttctttaaagcatattatgtgagactt 20051

                                                     
Query: 321   atgcttaagaatcaaatattggtattcaacaagctccttg 360
             |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 20052 atgcttaagaatcaaataatggtcttcaacaagctccttg 20091



 Score =  113 bits (57), Expect = 6e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 156   gtccagaatctcatcgaacgttgtcttcagctttacatgaaccagaaagaagtggttgga 215
             ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||  
Sbjct: 19587 gtccagaatcttattgaacgatgtcttcagctttatatgaaccagaaagaagtggttgag 19646

                                                      
Query: 216   actctatctttccaggcgaaaatagaacccagctttactga 256
             || ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 19647 accctatcattccaggcgaaaattgaacctagttttactga 19687



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 68/79 (86%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                         
Query: 448   tgaaccaaaatacatgttttttacaagacactact---agcactgcaattccagatagct 504
             |||| |||||| |||| ||||| | ||||||||||   ||||||||||| ||||||||||
Sbjct: 20743 tgaatcaaaatgcatgctttttgccagacactactcccagcactgcaatgccagatagct 20802

                                
Query: 505   ttctacacaatggaagttc 523
             | |||| ||||||||||||
Sbjct: 20803 tgctacccaatggaagttc 20821



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 126   cgcaaggtgtctcgcgaggacatacagctcgt 157
             |||||||| |||||| ||||||||||||||||
Sbjct: 18391 cgcaaggtttctcgccaggacatacagctcgt 18422
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0081C13
          Length = 144624

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                          
Query: 261    gtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgaggttg 320
              ||||||||||||||||| |||||||| | |||||| ||||| ||||||||||||||  | 
Sbjct: 109345 gtctggcagaaacttgaggaagagaatcgtgagttctttaaagcatattatgtgagactt 109404

                                                      
Query: 321    atgcttaagaatcaaatattggtattcaacaagctccttg 360
              |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 109405 atgcttaagaatcaaataatggtcttcaacaagctccttg 109444



 Score =  113 bits (57), Expect = 6e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                          
Query: 156    gtccagaatctcatcgaacgttgtcttcagctttacatgaaccagaaagaagtggttgga 215
              ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||  
Sbjct: 108940 gtccagaatcttattgaacgatgtcttcagctttatatgaaccagaaagaagtggttgag 108999

                                                       
Query: 216    actctatctttccaggcgaaaatagaacccagctttactga 256
              || ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 109000 accctatcattccaggcgaaaattgaacctagttttactga 109040



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 68/79 (86%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                          
Query: 448    tgaaccaaaatacatgttttttacaagacactact---agcactgcaattccagatagct 504
              |||| |||||| |||| ||||| | ||||||||||   ||||||||||| ||||||||||
Sbjct: 110096 tgaatcaaaatgcatgctttttgccagacactactcccagcactgcaatgccagatagct 110155

                                 
Query: 505    ttctacacaatggaagttc 523
              | |||| ||||||||||||
Sbjct: 110156 tgctacccaatggaagttc 110174



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 126    cgcaaggtgtctcgcgaggacatacagctcgt 157
              |||||||| |||||| ||||||||||||||||
Sbjct: 107744 cgcaaggtttctcgccaggacatacagctcgt 107775
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>ref|NM_202999.2| Arabidopsis thaliana unknown protein AT5G04090 transcript variant
           AT5G04090.2 mRNA, complete cds
          Length = 1263

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 148/181 (81%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 138 cgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcagctttacatgaac 197
           ||||| || ||||| || || |||||||| || ||||| || || |||||||||||||||
Sbjct: 114 cgcgaagatatacaactggttcagaatctaattgaacgatgcctccagctttacatgaac 173

                                                                       
Query: 198 cagaaagaagtggttggaactctatctttc-caggcgaaaatagaacccagctttactga 256
           ||||||||||| ||||  ||||| |||    ||||| || || |||||  | ||||| ||
Sbjct: 174 cagaaagaagttgttgacactct-tctagaacaggctaagatcgaacctggttttacaga 232

                                                                       
Query: 257 actcgtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgag 316
           ||| || |||||||| ||||||||||||||||  || ||||| |||||||||||| ||||
Sbjct: 233 actagtttggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgag 292

            
Query: 317 g 317
           |
Sbjct: 293 g 293
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>gb|BT015671.1| Arabidopsis thaliana At5g04090 gene, complete cds
          Length = 918

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 148/181 (81%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 138 cgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcagctttacatgaac 197
           ||||| || ||||| || || |||||||| || ||||| || || |||||||||||||||
Sbjct: 31  cgcgaagatatacaactggttcagaatctaattgaacgatgcctccagctttacatgaac 90

                                                                       
Query: 198 cagaaagaagtggttggaactctatctttc-caggcgaaaatagaacccagctttactga 256
           ||||||||||| ||||  ||||| |||    ||||| || || |||||  | ||||| ||
Sbjct: 91  cagaaagaagttgttgacactct-tctagaacaggctaagatcgaacctggttttacaga 149

                                                                       
Query: 257 actcgtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgag 316
           ||| || |||||||| ||||||||||||||||  || ||||| |||||||||||| ||||
Sbjct: 150 actagtttggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgag 209

            
Query: 317 g 317
           |
Sbjct: 210 g 210
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>gb|BT015375.1| Arabidopsis thaliana At5g04090 mRNA, complete cds
          Length = 1202

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 148/181 (81%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 138 cgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcagctttacatgaac 197
           ||||| || ||||| || || |||||||| || ||||| || || |||||||||||||||
Sbjct: 104 cgcgaagatatacaactggttcagaatctaattgaacgatgcctccagctttacatgaac 163

                                                                       
Query: 198 cagaaagaagtggttggaactctatctttc-caggcgaaaatagaacccagctttactga 256
           ||||||||||| ||||  ||||| |||    ||||| || || |||||  | ||||| ||
Sbjct: 164 cagaaagaagttgttgacactct-tctagaacaggctaagatcgaacctggttttacaga 222

                                                                       
Query: 257 actcgtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgag 316
           ||| || |||||||| ||||||||||||||||  || ||||| |||||||||||| ||||
Sbjct: 223 actagtttggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgag 282

            
Query: 317 g 317
           |
Sbjct: 283 g 283
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>emb|BX830728.1|CNS0A0SF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZF05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1227

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 148/181 (81%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 138 cgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcagctttacatgaac 197
           ||||| || ||||| || || |||||||| || ||||| || || |||||||||||||||
Sbjct: 114 cgcgaagatatacaactggttcagaatctaattgaacgatgcctccagctttacatgaac 173

                                                                       
Query: 198 cagaaagaagtggttggaactctatctttc-caggcgaaaatagaacccagctttactga 256
           ||||||||||| ||||  ||||| |||    ||||| || || |||||  | ||||| ||
Sbjct: 174 cagaaagaagttgttgacactct-tctagaacaggctaagatcgaacctggttttacaga 232

                                                                       
Query: 257 actcgtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgag 316
           ||| || |||||||| ||||||||||||||||  || ||||| |||||||||||| ||||
Sbjct: 233 actagtttggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgag 292

            
Query: 317 g 317
           |
Sbjct: 293 g 293
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>ref|NM_120491.3| Arabidopsis thaliana unknown protein AT5G04090 transcript variant
           AT5G04090.1 mRNA, complete cds
          Length = 1478

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 138 cgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcagctttacatgaac 197
           ||||| || ||||| || || |||||||| || ||||| || || |||||||||||||||
Sbjct: 115 cgcgaagatatacaactggttcagaatctaattgaacgatgcctccagctttacatgaac 174

                           
Query: 198 cagaaagaagtggttg 213
           ||||||||||| ||||
Sbjct: 175 cagaaagaagttgttg 190



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 264 tggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgagg 317
           |||||||| ||||||||||||||||  || ||||| |||||||||||| |||||
Sbjct: 455 tggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgagg 508
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>emb|BX830762.1|CNS0A0T9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS20ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1451

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 138 cgcgaggacatacagctcgtccagaatctcatcgaacgttgtcttcagctttacatgaac 197
           ||||| || ||||| || || |||||||| || ||||| || || |||||||||||||||
Sbjct: 115 cgcgaagatatacaactggttcagaatctaattgaacgatgcctccagctttacatgaac 174

                           
Query: 198 cagaaagaagtggttg 213
           ||||||||||| ||||
Sbjct: 175 cagaaagaagttgttg 190



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 264 tggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgagg 317
           |||||||| ||||||||||||||||  || ||||| |||||||||||| |||||
Sbjct: 455 tggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgagg 508
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>emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BAC clone F21E1 (ESSA project)
          Length = 97451

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 159   cagaatctcatcgaacgttgtcttcagctttacatgaaccagaaagaagtggttg 213
             |||||||| || ||||| || || |||||||||||||||||||||||||| ||||
Sbjct: 10925 cagaatctaattgaacgatgcctccagctttacatgaaccagaaagaagttgttg 10871



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 264   tggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgagg 317
             |||||||| ||||||||||||||||  || ||||| |||||||||||| |||||
Sbjct: 10606 tggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgagg 10553
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>emb|AL162873.1|ATF8F6 Arabidopsis thaliana DNA chromosome 5, BAC clone F8F6 (ESSA project)
          Length = 96936

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 159   cagaatctcatcgaacgttgtcttcagctttacatgaaccagaaagaagtggttg 213
             |||||||| || ||||| || || |||||||||||||||||||||||||| ||||
Sbjct: 96311 cagaatctaattgaacgatgcctccagctttacatgaaccagaaagaagttgttg 96257



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 264   tggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgagg 317
             |||||||| ||||||||||||||||  || ||||| |||||||||||| |||||
Sbjct: 95992 tggcagaagcttgaagaagagaaccgcgaatttttcaaggcatattatctgagg 95939
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 290      tgagttttttaaggcatattatgtgaggttgatgcttaagaatcaaata 338
                ||||||||| || ||||| ||| ||||||||||||||||||| ||||||
Sbjct: 29283889 tgagtttttcaaagcatactatttgaggttgatgcttaagaaccaaata 29283841
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>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0018H04
          Length = 142053

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 290   tgagttttttaaggcatattatgtgaggttgatgcttaagaatcaaata 338
             ||||||||| || ||||| ||| ||||||||||||||||||| ||||||
Sbjct: 46687 tgagtttttcaaagcatactatttgaggttgatgcttaagaaccaaata 46639
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>dbj|AK121711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076O20, full
            insert sequence
          Length = 4769

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                             
Query: 290  tgagttttttaaggcatattatgtgaggttgatgcttaagaatcaaata 338
            ||||||||| || ||||| ||| ||||||||||||||||||| ||||||
Sbjct: 3767 tgagtttttcaaagcatactatttgaggttgatgcttaagaaccaaata 3815
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>dbj|AK064803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D12, full
           insert sequence
          Length = 1395

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 290 tgagttttttaaggcatattatgtgaggttgatgcttaagaatcaaata 338
           ||||||||| || ||||| ||| ||||||||||||||||||| ||||||
Sbjct: 393 tgagtttttcaaagcatactatttgaggttgatgcttaagaaccaaata 441
to top
>gb|AY107192.1| Zea mays PCO124577 mRNA sequence
          Length = 1371

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 321 atgcttaagaatcaaatattggtattcaacaagct 355
           |||||||||||||||||| |||| |||||||||||
Sbjct: 358 atgcttaagaatcaaataatggtcttcaacaagct 392



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 180 cttcagctttacatgaaccagaaagaagtggt 211
           |||||| | |||||| ||||||||||||||||
Sbjct: 217 cttcagatgtacatggaccagaaagaagtggt 248
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>gb|BT024013.1| Zea mays clone EL01N0401G10 mRNA sequence
          Length = 1369

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 156 gtccagaatctcatcgaacgttgtcttcagctttacatgaaccagaaagaagtggttg 213
           ||||||||||| || || || || |||||| | ||||||||| |||||||||||||||
Sbjct: 216 gtccagaatcttatagagcgctgccttcagatgtacatgaacaagaaagaagtggttg 273



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                       
Query: 252 actgaactcgtctggcagaaacttgaagaagagaaccctgagttttttaaggcatattat 311
           |||||||| || |||||  |||||||  || |||| |||  |||||| || |||||  ||
Sbjct: 312 actgaacttgtttggcaacaacttgagcaacagaatcctctgtttttcaaagcatacgat 371

                                                   
Query: 312 gtgaggttgatgcttaagaatcaaatattggtattcaaca 351
            ||||| | |||||||||||||||||| |||| |||||||
Sbjct: 372 atgaggctaatgcttaagaatcaaataatggtcttcaaca 411
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>ref|NM_188492.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 855

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 264 tggcagaaacttgaagaagagaaccctga 292
           |||||||||||||||||||||||| ||||
Sbjct: 73  tggcagaaacttgaagaagagaactctga 101
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 264     tggcagaaacttgaagaagagaaccctga 292
               |||||||||||||||||||||||| ||||
Sbjct: 6573839 tggcagaaacttgaagaagagaactctga 6573811
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>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489G09
          Length = 148707

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 264    tggcagaaacttgaagaagagaaccctga 292
              |||||||||||||||||||||||| ||||
Sbjct: 141319 tggcagaaacttgaagaagagaactctga 141291
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>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483F08
          Length = 148985

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 264   tggcagaaacttgaagaagagaaccctga 292
             |||||||||||||||||||||||| ||||
Sbjct: 54010 tggcagaaacttgaagaagagaactctga 53982
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>ref|XM_324255.1| Neurospora crassa OR74A hypothetical protein (NCU04899.1) partial
           mRNA
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 2   cctcgacgtcgtccgcgcctccc 24
           |||||||||||||||||||||||
Sbjct: 501 cctcgacgtcgtccgcgcctccc 523
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>ref|XM_953315.1| Neurospora crassa OR74A hypothetical protein (NCU04899.1) partial
           mRNA
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 2   cctcgacgtcgtccgcgcctccc 24
           |||||||||||||||||||||||
Sbjct: 501 cctcgacgtcgtccgcgcctccc 523
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>ref|NM_202542.1| Arabidopsis thaliana unknown protein AT3G10250 transcript variant
           AT3G10250.2 mRNA, complete cds
          Length = 1336

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 107 gaacgatgccttcaactttacatgaatcagaaagaagt 144



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 191 gaactagtttggcagaagcttgaagaagagaa 222
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>ref|NM_111860.3| Arabidopsis thaliana unknown protein AT3G10250 transcript variant
           AT3G10250.1 mRNA, complete cds
          Length = 1409

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 180 gaacgatgccttcaactttacatgaatcagaaagaagt 217



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 264 gaactagtttggcagaagcttgaagaagagaa 295
to top
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
             complete sequence
          Length = 87937

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 171   gaacgttgtcttcagctttacatgaaccagaaagaagt 208
             ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 60526 gaacgatgccttcaactttacatgaatcagaaagaagt 60563
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>gb|AY079118.1| Arabidopsis thaliana AT3g10250/F14P13_15 mRNA, complete cds
          Length = 975

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 64  gaacgatgccttcaactttacatgaatcagaaagaagt 101



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 148 gaactagtttggcagaagcttgaagaagagaa 179
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>gb|AY054259.1| Arabidopsis thaliana AT3g10250/F14P13_15 mRNA, complete cds
          Length = 1385

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 180 gaacgatgccttcaactttacatgaatcagaaagaagt 217



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 264 gaactagtttggcagaagcttgaagaagagaa 295
to top
>emb|BX822965.1|CNS0A7AK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZD01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1195

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 93  gaacgatgccttcaactttacatgaatcagaaagaagt 130



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 177 gaactagtttggcagaagcttgaagaagagaa 208
to top
>emb|BX824110.1|CNS0A6PX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZB08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1291

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 62  gaacgatgccttcaactttacatgaatcagaaagaagt 99



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 146 gaactagtttggcagaagcttgaagaagagaa 177
to top
>emb|BX824987.1|CNS0A4XD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZG05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1263

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 158 gaacgatgccttcaactttacatgaatcagaaagaagt 195



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 242 gaactagtttggcagaagcttgaagaagagaa 273
to top
>gb|AY084385.1| Arabidopsis thaliana clone 106330 mRNA, complete sequence
          Length = 1367

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 171 gaacgttgtcttcagctttacatgaaccagaaagaagt 208
           ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 177 gaacgatgccttcaactttacatgaatcagaaagaagt 214



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gaactcgtctggcagaaacttgaagaagagaa 286
           ||||| || |||||||| ||||||||||||||
Sbjct: 261 gaactagtttggcagaagcttgaagaagagaa 292
to top
>gb|AC153798.1| Mus musculus  BAC RP23-262P15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 191619

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   tgagttttttaaggcatatta 310
             |||||||||||||||||||||
Sbjct: 50027 tgagttttttaaggcatatta 50047
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>ref|XM_630927.1| Dictyostelium discoideum Rab GTPase (DDB0229409), partial mRNA
          Length = 609

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 330 aatcaaatattggtattcaacaagc 354
           ||||||| |||||||||||||||||
Sbjct: 452 aatcaaagattggtattcaacaagc 476
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>gb|AC107669.7| Mus musculus chromosome 10, clone RP23-144A12, complete sequence
          Length = 186583

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    tgagttttttaaggcatatta 310
              |||||||||||||||||||||
Sbjct: 158763 tgagttttttaaggcatatta 158783
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>gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, complete sequence
          Length = 91573

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 105   gggggagaggaaggagaaggg 125
             |||||||||||||||||||||
Sbjct: 81909 gggggagaggaaggagaaggg 81889
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>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   gggggagaggaaggagaaggg 125
             |||||||||||||||||||||
Sbjct: 41688 gggggagaggaaggagaaggg 41708
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>gb|AC024361.21| Homo sapiens chromosome 17, clone RP11-388C12, complete sequence
          Length = 111473

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 100   tgtccgggggagaggaaggag 120
             |||||||||||||||||||||
Sbjct: 49060 tgtccgggggagaggaaggag 49040
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>gb|AC068014.16| Homo sapiens chromosome 17, clone RP11-567O16, complete sequence
          Length = 148509

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    tgtccgggggagaggaaggag 120
              |||||||||||||||||||||
Sbjct: 124558 tgtccgggggagaggaaggag 124578
to top
>gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome 14, complete sequence
          Length = 204723

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   gaagaagagaaccctgagttt 296
             |||||||||||||||||||||
Sbjct: 62357 gaagaagagaaccctgagttt 62377
to top
>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence
          Length = 182468

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ctcgtccagaatctcatcga 172
             ||||||||||||||||||||
Sbjct: 80276 ctcgtccagaatctcatcga 80295
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>ref|NM_197348.1| Oryza sativa (japonica cultivar-group) putative non-LTR retroelement
            reverse transcriptase (OSJNBa0026L12.31), mRNA
          Length = 4149

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tctggcagaaacttgaagaa 281
            ||||||||||||||||||||
Sbjct: 2354 tctggcagaaacttgaagaa 2335
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>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    gcggagctaggctagctagg 86
             ||||||||||||||||||||
Sbjct: 99875 gcggagctaggctagctagg 99856
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>gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, complete sequence
          Length = 191698

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 176    ttgtcttcagctttacatgaacca 199
              ||||||||||||||| ||||||||
Sbjct: 126968 ttgtcttcagctttatatgaacca 126991
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>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence
          Length = 202156

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 184    agctttacatgaaccagaaagaagtggt 211
              |||||||||||||||| |||| ||||||
Sbjct: 169177 agctttacatgaaccataaagtagtggt 169150
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>gb|AC140247.3| Mus musculus BAC clone RP23-469I15 from chromosome 9, complete sequence
          Length = 189336

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggggagaggaaggagaaggg 125
             ||||||||||||||||||||
Sbjct: 18313 ggggagaggaaggagaaggg 18332
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>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   gggggagaggaaggagaagg 124
             ||||||||||||||||||||
Sbjct: 41535 gggggagaggaaggagaagg 41554
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>gb|AC115359.5| Mus musculus BAC clone RP23-190K20 from chromosome 2, complete
            sequence
          Length = 184634

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  gaaaatagaacccagcttta 252
            ||||||||||||||||||||
Sbjct: 3061 gaaaatagaacccagcttta 3080
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>gb|BT014437.1| Lycopersicon esculentum clone 133759F, mRNA sequence
          Length = 1228

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 264 tggcagaaacttgaagaagagaaccctgagttttttaaggcatattatgtgaggttgatg 323
           |||||||| ||||||||||| ||||  || ||||| | ||||||| ||||  ||||||||
Sbjct: 281 tggcagaagcttgaagaagaaaaccaagaatttttcagggcatatcatgtacggttgatg 340



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 177 tgtcttcagctttacatgaaccag 200
           ||||| ||||||||||||||||||
Sbjct: 194 tgtctacagctttacatgaaccag 217
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>gb|BT022197.1| Drosophila melanogaster IP01109 full insert cDNA
          Length = 1022

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ctcgtccagaatctcatcga 172
           ||||||||||||||||||||
Sbjct: 360 ctcgtccagaatctcatcga 341
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>gb|AC114819.4| Mus musculus BAC clone RP23-52J20 from chromosome 8, complete sequence
          Length = 204239

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tggagcagagcggagcggag 72
             ||||||||||||||||||||
Sbjct: 61070 tggagcagagcggagcggag 61051
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>gb|AC127274.4| Mus musculus BAC clone RP24-156G13 from chromosome 17, complete
             sequence
          Length = 177688

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   tgatgcttaagaatcaaata 338
             ||||||||||||||||||||
Sbjct: 32106 tgatgcttaagaatcaaata 32125
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>gb|AC121922.3| Mus musculus BAC clone RP24-198H19 from chromosome 9, complete sequence
          Length = 180690

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ggggagaggaaggagaaggg 125
              ||||||||||||||||||||
Sbjct: 101087 ggggagaggaaggagaaggg 101106
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>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence
          Length = 193861

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    gggggagaggaaggagaagg 124
              ||||||||||||||||||||
Sbjct: 158941 gggggagaggaaggagaagg 158960
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>ref|XM_659894.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40111)
            partial mRNA
          Length = 1303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  ggggagaggaaggagaaggg 125
            ||||||||||||||||||||
Sbjct: 1080 ggggagaggaaggagaaggg 1061
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>emb|AL390774.10| Human DNA sequence from clone RP11-417B4 on chromosome 9 Contains part of
              the gene for a novel protein (KIAA1608), a novel gene, a
              LSM5 homolog, U6 small nuclear RNA associated (S.
              cerevisiae) (LSM5) pseudogene and a phosphatidylinositol
              glycan, class F (PIGF) pseudogene, complete sequence
          Length = 197055

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    tccttctggagcactttctg 408
              ||||||||||||||||||||
Sbjct: 101291 tccttctggagcactttctg 101272
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>emb|AL049691.18|HSJ1123D4 Human DNA sequence from clone RP5-1123D4 on chromosome 20q12 Contains
              STSs and GSSs, complete sequence
          Length = 169243

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    cagctcgtccagaatctcat 169
              ||||||||||||||||||||
Sbjct: 116262 cagctcgtccagaatctcat 116243
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>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence
          Length = 217939

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ggggagaggaaggagaaggg 125
              ||||||||||||||||||||
Sbjct: 168752 ggggagaggaaggagaaggg 168771
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>emb|AL670939.6| Mouse DNA sequence from clone RP23-59O12 on chromosome 4 Contains the 3'
              end of the Mpdz gene for multiple PDZ domain protein,
              complete sequence
          Length = 180629

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    gggggagaggaaggagaagg 124
              ||||||||||||||||||||
Sbjct: 118671 gggggagaggaaggagaagg 118690
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence,
            complete sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  tctggcagaaacttgaagaa 281
            ||||||||||||||||||||
Sbjct: 9053 tctggcagaaacttgaagaa 9072
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>ref|NM_079199.2| Drosophila melanogaster Transcription factor IIE CG1276-RA
           (TfIIEbeta), mRNA
          Length = 1052

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ctcgtccagaatctcatcga 172
           ||||||||||||||||||||
Sbjct: 406 ctcgtccagaatctcatcga 387
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>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone
             ct7-342a4, complete sequence
          Length = 154201

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggggagaggaaggagaaggg 125
             ||||||||||||||||||||
Sbjct: 60301 ggggagaggaaggagaaggg 60320
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>gb|AC157477.2| Mus musculus BAC clone RP24-141A7 from chromosome 9, complete sequence
          Length = 163557

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ggggagaggaaggagaaggg 125
              ||||||||||||||||||||
Sbjct: 157812 ggggagaggaaggagaaggg 157831
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 262      tctggcagaaacttgaagaa 281
                ||||||||||||||||||||
Sbjct: 19367328 tctggcagaaacttgaagaa 19367309
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 67       gcggagctaggctagctagg 86
                ||||||||||||||||||||
Sbjct: 16148705 gcggagctaggctagctagg 16148686
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>gb|AC157654.2| Mus musculus BAC clone RP24-286J10 from chromosome 13, complete
             sequence
          Length = 152221

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   gggggagaggaaggagaagg 124
             ||||||||||||||||||||
Sbjct: 81839 gggggagaggaaggagaagg 81820
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>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence
          Length = 268433

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   gtattcaacaagctccttgc 361
             ||||||||||||||||||||
Sbjct: 11752 gtattcaacaagctccttgc 11771
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>gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone rp23-117j21, complete
             sequence
          Length = 215057

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggggagaggaaggagaaggg 125
             ||||||||||||||||||||
Sbjct: 62913 ggggagaggaaggagaaggg 62932
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>emb|AL928915.24| Mouse DNA sequence from clone RP23-276J8 on chromosome 2, complete
             sequence
          Length = 145879

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   gaaaatagaacccagcttta 252
             ||||||||||||||||||||
Sbjct: 46757 gaaaatagaacccagcttta 46776
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>gb|AC151355.2| Xenopus tropicalis clone ISB-52K19, complete sequence
          Length = 55519

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   ccttctggagcactttctgt 409
             ||||||||||||||||||||
Sbjct: 48189 ccttctggagcactttctgt 48170
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>gb|U72893.1|DMU72893 Drosophila melanogaster TFIIE small subunit mRNA, complete cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ctcgtccagaatctcatcga 172
           ||||||||||||||||||||
Sbjct: 406 ctcgtccagaatctcatcga 387
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>emb|BX842684.4| Zebrafish DNA sequence from clone DKEY-33I22 in linkage group 20,
             complete sequence
          Length = 140982

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 454   aaaatacatgttttttacaagaca 477
             ||||||||||||||||| ||||||
Sbjct: 51542 aaaatacatgttttttataagaca 51565
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>gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14 of 83 of the complete
              sequence
          Length = 311933

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    ctcgtccagaatctcatcga 172
              ||||||||||||||||||||
Sbjct: 291712 ctcgtccagaatctcatcga 291693
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 262      tctggcagaaacttgaagaa 281
                ||||||||||||||||||||
Sbjct: 19378604 tctggcagaaacttgaagaa 19378585
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>emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on chromosome X, complete
              sequence
          Length = 118199

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    gggggagaggaaggagaagg 124
              ||||||||||||||||||||
Sbjct: 105658 gggggagaggaaggagaagg 105639
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>emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on chromosome X, complete
             sequence
          Length = 175563

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   gggggagaggaaggagaagg 124
             ||||||||||||||||||||
Sbjct: 41288 gggggagaggaaggagaagg 41307
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>emb|AL672128.8| Mouse DNA sequence from clone RP23-153G22 on chromosome X, complete
             sequence
          Length = 213937

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   agatagctttctacacaatg 516
             ||||||||||||||||||||
Sbjct: 10567 agatagctttctacacaatg 10548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,881,205
Number of Sequences: 3902068
Number of extensions: 4881205
Number of successful extensions: 114812
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114416
Number of HSP's gapped (non-prelim): 396
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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