>SCFD2_HUMAN (Q8WU76) Sec1 family domain-containing protein 2 (Syntaxin-binding|
           protein 1-like 1)
          Length = 684

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +3

Query: 12  LRKWLMEALQLEKLSFP-SKGRQMASVSELRSMVQMLCQHELSLVRNKGVIXXXXXXXXX 188
           +R+ L+EA   E L    S GR   +  +L S +Q+   +  +L+ + G++         
Sbjct: 359 VRRHLVEAASRENLPIKMSMGR--VTPGQLMSYIQLFKNNLKALMNHCGLLQLGLATAQT 416

Query: 189 XXXPQSTRWEAFTSAERILSVTSAETTQSL 278
              PQ+ +W+ F + ER+L  +  E+  S+
Sbjct: 417 LKHPQTAKWDNFLAFERLLLQSIGESAMSV 446

>SCFD2_MOUSE (Q8BTY8) Sec1 family domain-containing protein 2 (Syntaxin-binding|
           protein 1-like 1) (Neuronal Sec1)
          Length = 684

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +3

Query: 12  LRKWLMEALQLEKLSFP-SKGRQMASVSELRSMVQMLCQHELSLVRNKGVIXXXXXXXXX 188
           +R+ L+EA   E L    S GR   +  +L S +Q+   +  +L  + G++         
Sbjct: 359 VRRHLVEAASRENLPIKMSMGR--VTPGQLMSYIQLFKNNLRALRNHCGLLQLGMATVQT 416

Query: 189 XXXPQSTRWEAFTSAERILSVTSAETTQS 275
              PQ+ +W+ F + ER+L  +  ++T +
Sbjct: 417 LKHPQTAKWDNFLAFERLLLQSLGDSTMA 445

>MSB2_YEAST (P32334) Protein MSB2 (Multicopy suppressor of bud emergence 2)|
          Length = 1306

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 198 PQSTRWEAFTSAERILSVTSAETTQSLASEIRDFINTSTSVESHKQGNAMESTQG 362
           P +T   A T A  ++S TSAET+Q   S+    + TS+   S     +  S+QG
Sbjct: 599 PYTTAGGASTEASSLISSTSAETSQVSYSQSTTALQTSSFASSSTTEGSETSSQG 653

>HYFD_ECOLI (P77416) Hydrogenase-4 component D (EC 1.-.-.-)|
          Length = 479

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
 Frame = +1

Query: 1   TGVD*GNGLWRLYSLRSCHFHLKVDRWPLFQSFVLWCKCSVNTSCPW*ETKGLFSWH*LL 180
           TGV   NG +  + L +  F L V+ W L  + +L    SV +          F+W   +
Sbjct: 384 TGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVAS----------FAW--FI 431

Query: 181 KWLSRSLKVLAGKPLQVLRE-Y*V*HQLR-QLKVLPAKSVISSTLALQW 321
           +W  R   V+ GKP + + +   +   +R  L VL   S+ISS +A  W
Sbjct: 432 RWFGR---VVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATW 477

>AKR1_CANAL (Q5AL27) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 813

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 37  YSLRSCHFHLKVDRWPLFQSFVLWCKCSVNTSCPW*ETKGLFSW 168
           Y  ++ HFH  V  W LFQ   +   C V T   +   KGL +W
Sbjct: 632 YGYKNHHFHFNVFMWDLFQCVWVSFLCIVQT---FQILKGLTTW 672

>YJU6_YEAST (P39529) Putative 86.7 kDa transcriptional regulatory protein in|
           NUC1-NCE1 intergenic region
          Length = 758

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 118 SICTIERSSETEAICRPLDGNDNFSSCKASISHFLNQHQ 2
           +I  ++R   + A+   L  N+NF+ C+  + H    HQ
Sbjct: 631 NIVKLQRQESSGALVPQLQTNNNFTKCQGELHHGQQHHQ 669

>YFB2_YEAST (P43580) Hypothetical 17.2 kDa protein in HSP12-HXT10 intergenic|
           region
          Length = 148

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 12  LRKWLMEALQLEKLSFPSKGRQMASVSE--LRSMVQMLCQHELSLVRN 149
           +RKW    +  E++   S G+Q++S+ E    S V + C  +L+ +R+
Sbjct: 97  IRKWFRRHILKEEIEILSHGKQLSSIDEDYCPSNVLVGCSRDLNKLRS 144

>WDR36_HUMAN (Q8NI36) WD repeat-containing protein 36 (T-cell activation WD|
           repeat-containing protein) (TA-WDRP)
          Length = 951

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -2

Query: 285 RWQDFELSQLMLHLIFSQHL*RLPSE 208
           R +DFEL+Q  L L    HL  LPSE
Sbjct: 886 RKRDFELAQAYLALFLKLHLKMLPSE 911


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,883,171
Number of Sequences: 219361
Number of extensions: 832895
Number of successful extensions: 1750
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)