>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score =  331 bits (167), Expect = 9e-88
 Identities = 295/334 (88%), Gaps = 4/334 (1%)
 Strand = Plus / Minus

                                                                         
Query: 6     tgttgattaaggaaatggcttatggaggctttacagcttgagaagttgtcatttccatct 65
             ||||||||||| |||||||||||||| |||||||| | ||||||||| || || ||||| 
Sbjct: 97844 tgttgattaag-aaatggcttatggaagctttacaacatgagaagttatccttcccatcc 97786

                                                                         
Query: 66    aaaggtcgaca--gatg-gcctctgtttcagagcttcgttctatggtgcaaatgctctgt 122
             |||||||| ||  ||   ||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 97785 aaaggtcggcaaggagctgcctctgtttcagagcttcattctatggttcaaatgctctct 97726

                                                                         
Query: 123   caacacgagctgtccttggtaagaaacaaaggggttattcagttggcactagctgctgaa 182
             | | || || | ||||| |||||||||| ||||||||| || |||||||| |||||||||
Sbjct: 97725 cgagaccagttatccttagtaagaaacagaggggttatccaattggcactggctgctgaa 97666

                                                                         
Query: 183   atggctctccaggagcctcaaagtactcgctgggaagcctttacaagtgctgagagaata 242
             |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 97665 atggctctccaggagcctcaaagttctcgctgggatgcctttacaagtgcagagagaata 97606

                                                                         
Query: 243   ttaagtgtaacatcagctgagacaactcaaagtcttgccagcgaaatccgtgatttcatc 302
             |||||||||||||| || ||||||||||||||||||||||| ||  | |||||||| |||
Sbjct: 97605 ttaagtgtaacatctgcagagacaactcaaagtcttgccagtgagcttcgtgattttatc 97546

                                               
Query: 303   aacactagcacttcagtggaatctcacaaacaag 336
             ||||||||||||||||| ||||||||||| ||||
Sbjct: 97545 aacactagcacttcagttgaatctcacaagcaag 97512

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  331 bits (167), Expect = 9e-88
 Identities = 295/334 (88%), Gaps = 4/334 (1%)
 Strand = Plus / Plus

                                                                           
Query: 6       tgttgattaaggaaatggcttatggaggctttacagcttgagaagttgtcatttccatct 65
               ||||||||||| |||||||||||||| |||||||| | ||||||||| || || ||||| 
Sbjct: 3316450 tgttgattaag-aaatggcttatggaagctttacaacatgagaagttatccttcccatcc 3316508

                                                                           
Query: 66      aaaggtcgaca--gatg-gcctctgtttcagagcttcgttctatggtgcaaatgctctgt 122
               |||||||| ||  ||   ||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 3316509 aaaggtcggcaaggagctgcctctgtttcagagcttcattctatggttcaaatgctctct 3316568

                                                                           
Query: 123     caacacgagctgtccttggtaagaaacaaaggggttattcagttggcactagctgctgaa 182
               | | || || | ||||| |||||||||| ||||||||| || |||||||| |||||||||
Sbjct: 3316569 cgagaccagttatccttagtaagaaacagaggggttatccaattggcactggctgctgaa 3316628

                                                                           
Query: 183     atggctctccaggagcctcaaagtactcgctgggaagcctttacaagtgctgagagaata 242
               |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 3316629 atggctctccaggagcctcaaagttctcgctgggatgcctttacaagtgcagagagaata 3316688

                                                                           
Query: 243     ttaagtgtaacatcagctgagacaactcaaagtcttgccagcgaaatccgtgatttcatc 302
               |||||||||||||| || ||||||||||||||||||||||| ||  | |||||||| |||
Sbjct: 3316689 ttaagtgtaacatctgcagagacaactcaaagtcttgccagtgagcttcgtgattttatc 3316748

                                                 
Query: 303     aacactagcacttcagtggaatctcacaaacaag 336
               ||||||||||||||||| ||||||||||| ||||
Sbjct: 3316749 aacactagcacttcagttgaatctcacaagcaag 3316782

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  331 bits (167), Expect = 9e-88
 Identities = 295/334 (88%), Gaps = 4/334 (1%)
 Strand = Plus / Plus

                                                                           
Query: 6       tgttgattaaggaaatggcttatggaggctttacagcttgagaagttgtcatttccatct 65
               ||||||||||| |||||||||||||| |||||||| | ||||||||| || || ||||| 
Sbjct: 3325155 tgttgattaag-aaatggcttatggaagctttacaacatgagaagttatccttcccatcc 3325213

                                                                           
Query: 66      aaaggtcgaca--gatg-gcctctgtttcagagcttcgttctatggtgcaaatgctctgt 122
               |||||||| ||  ||   ||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 3325214 aaaggtcggcaaggagctgcctctgtttcagagcttcattctatggttcaaatgctctct 3325273

                                                                           
Query: 123     caacacgagctgtccttggtaagaaacaaaggggttattcagttggcactagctgctgaa 182
               | | || || | ||||| |||||||||| ||||||||| || |||||||| |||||||||
Sbjct: 3325274 cgagaccagttatccttagtaagaaacagaggggttatccaattggcactggctgctgaa 3325333

                                                                           
Query: 183     atggctctccaggagcctcaaagtactcgctgggaagcctttacaagtgctgagagaata 242
               |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 3325334 atggctctccaggagcctcaaagttctcgctgggatgcctttacaagtgcagagagaata 3325393

                                                                           
Query: 243     ttaagtgtaacatcagctgagacaactcaaagtcttgccagcgaaatccgtgatttcatc 302
               |||||||||||||| || ||||||||||||||||||||||| ||  | |||||||| |||
Sbjct: 3325394 ttaagtgtaacatctgcagagacaactcaaagtcttgccagtgagcttcgtgattttatc 3325453

                                                 
Query: 303     aacactagcacttcagtggaatctcacaaacaag 336
               ||||||||||||||||| ||||||||||| ||||
Sbjct: 3325454 aacactagcacttcagttgaatctcacaagcaag 3325487

>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full
            insert sequence
          Length = 3521

 Score =  317 bits (160), Expect = 1e-83
 Identities = 295/335 (88%), Gaps = 5/335 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    tgttgattaaggaaatggcttatggaggctttacagcttgagaagttgtcatttccatct 65
            ||||||||||| |||||||||||||| |||||||| | ||||||||| || || ||||| 
Sbjct: 1632 tgttgattaag-aaatggcttatggaagctttacaacatgagaagttatccttcccatcc 1690

                                                                        
Query: 66   aaaggtcgaca--gatg-gcctctgtttcagagcttcgttctatggtgcaaatgctctgt 122
            |||||||| ||  ||   ||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 1691 aaaggtcggcaaggagctgcctctgtttcagagcttcattctatggttcaaatgctctct 1750

                                                                        
Query: 123  caacacgagctgtccttggtaagaaacaaaggggttattcagttggcactag-ctgctga 181
            | | || || | ||||| |||||||||| ||||||||| || |||||||| | |||||||
Sbjct: 1751 cgagaccagttatccttagtaagaaacagaggggttatccaattggcactgggctgctga 1810

                                                                        
Query: 182  aatggctctccaggagcctcaaagtactcgctgggaagcctttacaagtgctgagagaat 241
            ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||
Sbjct: 1811 aatggctctccaggagcctcaaagttctcgctgggatgcctttacaagtgcagagagaat 1870

                                                                        
Query: 242  attaagtgtaacatcagctgagacaactcaaagtcttgccagcgaaatccgtgatttcat 301
            ||||||||||||||| || ||||||||||||||||||||||| ||  | |||||||| ||
Sbjct: 1871 attaagtgtaacatctgcagagacaactcaaagtcttgccagtgagcttcgtgattttat 1930

                                               
Query: 302  caacactagcacttcagtggaatctcacaaacaag 336
            |||||||||||||||||| ||||||||||| ||||
Sbjct: 1931 caacactagcacttcagttgaatctcacaagcaag 1965

>emb|AL442123.12| Human DNA sequence from clone RP11-175O19 on chromosome 10 Contains the
             3' end of the MLR2 gene for a novel protein (likely
             ortholog of mouse transcription factor MLR2), the gene for
             a novel protein novel protein (DKFZP564P1916)(FLJ13022),
             the 3' end of the SLIT1 gene for slit homolog 1
             (Drosophila) and a CpG island, complete sequence
          Length = 96660

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   ttggtaagaaacaaaggggtt 158
             |||||||||||||||||||||
Sbjct: 88019 ttggtaagaaacaaaggggtt 87999

>emb|AL008727.2|HS306A4 Human DNA sequence from clone LA16c-306A4 on chromosome 16, complete
            sequence
          Length = 32446

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 166  tggcactagctgctgaaatgg 186
            |||||||||||||||||||||
Sbjct: 3954 tggcactagctgctgaaatgg 3934

>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8
          Length = 278911

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    tggcactagctgctgaaatgg 186
              |||||||||||||||||||||
Sbjct: 104768 tggcactagctgctgaaatgg 104748

>gb|AC009986.10| Homo sapiens chromosome 10 clone RP11-346D6, complete sequence
          Length = 181733

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 166   tggcactagctgctgaaatggctct 190
             |||||| ||||||||||||||||||
Sbjct: 70011 tggcacaagctgctgaaatggctct 70035

>ref|XM_691080.1| PREDICTED: Danio rerio similar to neuron navigator 3 (LOC567779),
            mRNA
          Length = 3720

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 177  gctgaaatggctctccaggag 197
            |||||||||||||||||||||
Sbjct: 1186 gctgaaatggctctccaggag 1206

>emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in linkage group 4, complete
              sequence
          Length = 249278

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    gctgaaatggctctccaggag 197
              |||||||||||||||||||||
Sbjct: 228265 gctgaaatggctctccaggag 228245

>ref|XM_424787.1| PREDICTED: Gallus gallus similar to Molybdenum cofactor synthesis
           protein 2 large subunit (Molybdopterin synthase large
           subunit) (MPT synthase large subunit) (MOCS2B) (MOCO1-B)
           (LOC427199), mRNA
          Length = 794

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgctgagagaatattaagtg 249
           ||||||||||||||||||||
Sbjct: 228 tgctgagagaatattaagtg 209

>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence
          Length = 366816

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    tgaaatggctctccaggagc 198
              ||||||||||||||||||||
Sbjct: 181670 tgaaatggctctccaggagc 181651

>ref|NM_018061.1| Homo sapiens PRP38 pre-mRNA processing factor 38 (yeast) domain
            containing B (PRPF38B), mRNA
          Length = 3239

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  gagaatattaagtgtaacat 255
            ||||||||||||||||||||
Sbjct: 2286 gagaatattaagtgtaacat 2267

>emb|AL591719.8| Human DNA sequence from clone RP11-293A10 on chromosome 1 Contains
            the 3' end of a novel gene (FLJ10330), a novel gene
            (FLJ35838), the 5' end of the STXBP3 gene for syntaxin
            binding protein 3, a novel gene and a chromosome 20 open
            reading frame 147 (C20orf147) pseudogene, complete
            sequence
          Length = 96417

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  gagaatattaagtgtaacat 255
            ||||||||||||||||||||
Sbjct: 3880 gagaatattaagtgtaacat 3861

>gb|AC122153.4| Oryctolagus cuniculus clone LB1-9L8, complete sequence
          Length = 216345

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    gttctatggtgcaaatgctc 119
              ||||||||||||||||||||
Sbjct: 142734 gttctatggtgcaaatgctc 142753

>emb|AL833950.1|HSM805133 Homo sapiens mRNA; cDNA DKFZp434O1172 (from clone DKFZp434O1172)
          Length = 3733

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  gagaatattaagtgtaacat 255
            ||||||||||||||||||||
Sbjct: 2514 gagaatattaagtgtaacat 2495

>emb|CR613459.1| full-length cDNA clone CS0CAP006YA21 of Thymus of Homo sapiens
            (human)
          Length = 1745

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  gagaatattaagtgtaacat 255
            ||||||||||||||||||||
Sbjct: 1184 gagaatattaagtgtaacat 1165

>emb|CR600202.1| full-length cDNA clone CS0DC018YM08 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 871

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 gagaatattaagtgtaacat 255
           ||||||||||||||||||||
Sbjct: 280 gagaatattaagtgtaacat 261

>dbj|AK001192.1| Homo sapiens cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
            SPLICING FACTOR, ARGININE/SERINE-RICH 4
          Length = 3239

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  gagaatattaagtgtaacat 255
            ||||||||||||||||||||
Sbjct: 2286 gagaatattaagtgtaacat 2267

>gb|AC027678.11| Homo sapiens chromosome 10 clone RP11-97A17, complete sequence
          Length = 150468

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ttctatggtgcaaatgctct 120
             ||||||||||||||||||||
Sbjct: 89822 ttctatggtgcaaatgctct 89841

>dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDa
          Length = 225033

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    tgaaatggctctccaggagc 198
              ||||||||||||||||||||
Sbjct: 110601 tgaaatggctctccaggagc 110582

>gb|AC022268.5| Homo sapiens BAC clone RP11-494K17 from 12, complete sequence
          Length = 192952

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ctgctgaaatggctctccag 194
              ||||||||||||||||||||
Sbjct: 142431 ctgctgaaatggctctccag 142412

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    gttctatggtgcaaatgctc 119
              ||||||||||||||||||||
Sbjct: 383750 gttctatggtgcaaatgctc 383769

>dbj|AB179116.1| Macaca fascicularis testis cDNA clone: QtsA-13081, similar to human
            hypothetical protein FLJ10330 (FLJ10330), mRNA, RefSeq:
            NM_018061.1
          Length = 2204

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  gagaatattaagtgtaacat 255
            ||||||||||||||||||||
Sbjct: 1563 gagaatattaagtgtaacat 1544

>emb|BX933659.2| Gallus gallus finished cDNA, clone ChEST947c12
          Length = 1071

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgctgagagaatattaagtg 249
           ||||||||||||||||||||
Sbjct: 502 tgctgagagaatattaagtg 483

>emb|BX936263.1| Gallus gallus finished cDNA, clone ChEST960c8
          Length = 1071

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgctgagagaatattaagtg 249
           ||||||||||||||||||||
Sbjct: 502 tgctgagagaatattaagtg 483

>gb|AC078822.28| Homo sapiens 12 BAC RP11-216I5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166825

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   ctgctgaaatggctctccag 194
             ||||||||||||||||||||
Sbjct: 14382 ctgctgaaatggctctccag 14401

>emb|AL845272.2| Mouse DNA sequence from clone RP23-169D18 on chromosome X, complete
             sequence
          Length = 117773

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 100   gttctatggtgcaaatgctctgtcaaca 127
             |||||||| ||||| |||||||||||||
Sbjct: 64057 gttctatgatgcaagtgctctgtcaaca 64030


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,215,574
Number of Sequences: 3902068
Number of extensions: 3215574
Number of successful extensions: 58459
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58383
Number of HSP's gapped (non-prelim): 75
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)