ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdh03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103703.1| Zea mays PCO150529 mRNA sequence 119 6e-24
2dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
3ref|XM_466771.1| Oryza sativa (japonica cultivar-group), mRNA 113 4e-22
4gb|BT016927.1| Zea mays clone E04912703A12.c mRNA sequence 96 9e-17
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
6dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
7dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
8dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone... 52 0.001
9gb|DQ430309.1| Sorghum bicolor voucher PI585454 locus pSB1901 ge... 48 0.019
10gb|DQ430308.1| Sorghum bicolor voucher PI267539 locus pSB1901 ge... 48 0.019
11gb|DQ430307.1| Sorghum bicolor voucher PI267408 locus pSB1901 ge... 48 0.019
12gb|DQ430306.1| Sorghum bicolor voucher PI221607 locus pSB1901 ge... 48 0.019
13gb|DQ430305.1| Sorghum bicolor voucher PI152702 locus pSB1901 ge... 48 0.019
14gb|DQ430304.1| Sorghum bicolor voucher NSL92371 locus pSB1901 ge... 48 0.019
15gb|DQ430303.1| Sorghum bicolor voucher NSL87902b locus pSB1901 g... 48 0.019
16gb|DQ430302.1| Sorghum bicolor voucher NSL87902a locus pSB1901 g... 48 0.019
17gb|DQ430301.1| Sorghum bicolor voucher NSL87666 locus pSB1901 ge... 48 0.019
18gb|DQ430300.1| Sorghum bicolor voucher NSL77217 locus pSB1901 ge... 48 0.019
19gb|DQ430299.1| Sorghum bicolor voucher NSL77034 locus pSB1901 ge... 48 0.019
20gb|DQ430298.1| Sorghum bicolor voucher NSL56174 locus pSB1901 ge... 48 0.019
21gb|DQ430297.1| Sorghum bicolor voucher NSL56003 locus pSB1901 ge... 48 0.019
22gb|DQ430296.1| Sorghum bicolor voucher NSL55243 locus pSB1901 ge... 48 0.019
23gb|DQ430295.1| Sorghum bicolor voucher NSL51365 locus pSB1901 ge... 48 0.019
24gb|DQ430294.1| Sorghum bicolor voucher NSL51030 locus pSB1901 ge... 48 0.019
25gb|DQ430293.1| Sorghum bicolor voucher NSL50875 locus pSB1901 ge... 48 0.019
26gb|DQ430292.1| Sorghum bicolor voucher BTx623 locus pSB1901 geno... 48 0.019
27ref|XM_514308.1| PREDICTED: Pan troglodytes similar to KIAA0470 ... 44 0.29
28gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, com... 44 0.29
29gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complet... 44 0.29
30ref|NM_014812.1| Homo sapiens centrosomal protein 170kDa (CEP170... 44 0.29
31ref|XM_496715.2| PREDICTED: Homo sapiens centrosomal protein 170... 44 0.29
32gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, comp... 44 0.29
33dbj|AB007939.1| Homo sapiens mRNA for KIAA0470 protein, partial cds 44 0.29
34gb|BC050722.1| Homo sapiens centrosomal protein 170kDa, mRNA (cD... 44 0.29
35dbj|AB022659.1| Homo sapiens mRNA for KARP-1-binding protein 3, ... 44 0.29
36dbj|AB022658.1| Homo sapiens mRNA for KARP-1-binding protein 2 (... 44 0.29
37dbj|AB022657.1| Homo sapiens mRNA for KARP-1-binding protein 1 (... 44 0.29
38gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complet... 42 1.1
39dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
40gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosom... 40 4.5
41gb|AC129320.5| Mus musculus BAC clone RP24-133J7 from chromosome... 40 4.5
42gb|AC164551.2| Mus musculus BAC clone RP23-365G9 from chromosome... 40 4.5
43emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, c... 40 4.5
44emb|BX538242.1|HSM806479 Homo sapiens genomic DNA; cDNA DKFZp686... 40 4.5
45gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 4.5
46gb|DQ430310.1| Sorghum propinquum locus pSB1901 genomic sequence 40 4.5
47gb|AC092171.4| Homo sapiens BAC clone RP11-1275H24 from 7, compl... 40 4.5
48gb|AC097632.2| Homo sapiens chromosome 3 clone RP11-90H15, compl... 40 4.5
49emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in... 40 4.5
50gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, co... 40 4.5
51gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequ... 40 4.5
52gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome... 40 4.5
53emb|AL844562.3| Mouse DNA sequence from clone RP23-230F7 on chro... 40 4.5 
>gb|AY103703.1| Zea mays PCO150529 mRNA sequence
          Length = 595

 Score =  119 bits (60), Expect = 6e-24
 Identities = 118/136 (86%), Gaps = 1/136 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cctctcggtgtgccgacgcagtctgcccacccagctcgtttctccccggtatgacaagta 62
           ||||| || ||||||||||||||||| ||||||||||| ||||| || | ||||||||||
Sbjct: 200 cctcttggggtgccgacgcagtctgctcacccagctcgcttctcaccag-atgacaagta 258

                                                                       
Query: 63  cgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaacccagcagccagc 122
           | | || ||||| ||||||||||||||||| |||||| | |||||||| ||| |||||||
Sbjct: 259 ctctcgccagcggtacctgttgaagaagagatttggacttctgccaacgcagaagccagc 318

                           
Query: 123 acaaaagtactgaagc 138
           ||  ||||||||||||
Sbjct: 319 actgaagtactgaagc 334
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>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full
            insert sequence
          Length = 1462

 Score =  117 bits (59), Expect = 2e-23
 Identities = 117/135 (86%), Gaps = 1/135 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cctctcggtgtgccgacgcagtctgcccacccagctcgtttctccccggtatgacaagta 62
            ||||||||||| || ||||||||||| ||||||||||| ||||| || | ||||||||||
Sbjct: 1173 cctctcggtgttcccacgcagtctgctcacccagctcgcttctctccag-atgacaagta 1231

                                                                        
Query: 63   cgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaacccagcagccagc 122
            | | || ||| | ||||||||||||||||| || || ||||||||||||||  |||||||
Sbjct: 1232 ctcacgccagagatacctgttgaagaagagattcgggttgctgccaacccaaaagccagc 1291

                           
Query: 123  acaaaagtactgaag 137
            || ||||||||||||
Sbjct: 1292 accaaagtactgaag 1306
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>ref|XM_466771.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 777

 Score =  113 bits (57), Expect = 4e-22
 Identities = 115/133 (86%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cctctcggtgtgccgacgcagtctgcccacccagctcgtttctccccggtatgacaagta 62
           ||||||||||| || ||||||||||| ||||||||||| ||||| || | ||||||||||
Sbjct: 646 cctctcggtgttcccacgcagtctgctcacccagctcgcttctctccag-atgacaagta 704

                                                                       
Query: 63  cgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaacccagcagccagc 122
           | | || ||| | ||||||||||||||||| || || ||||||||||||||  |||||||
Sbjct: 705 ctcacgccagagatacctgttgaagaagagattcgggttgctgccaacccaaaagccagc 764

                        
Query: 123 acaaaagtactga 135
           || ||||||||||
Sbjct: 765 accaaagtactga 777
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>gb|BT016927.1| Zea mays clone E04912703A12.c mRNA sequence
          Length = 510

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 115/136 (84%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   cctctcggtgtgccgacgcagtctgcccacccagctcgtttctccccggtatgacaagta 62
           ||||| || ||||| ||||||||||| ||||||||||| ||||| || | ||||||||||
Sbjct: 288 cctcttggggtgccaacgcagtctgctcacccagctcggttctcaccag-atgacaagta 230

                                                                       
Query: 63  cgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaacccagcagccagc 122
           | | || ||||| ||||||||||||||||| |||||| | |||||||| ||| | |||| 
Sbjct: 229 ctctcgccagcgatacctgttgaagaagagatttggacttctgccaacgcagaatccagg 170

                           
Query: 123 acaaaagtactgaagc 138
           ||  ||||||||||||
Sbjct: 169 accgaagtactgaagc 154
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                            
Query: 53       atgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaaccc 112
                ||||||||||| | || ||| | ||||||||||||||||| || || |||||||||||||
Sbjct: 24593208 atgacaagtactcacgccagagatacctgttgaagaagagattcgggttgctgccaaccc 24593149

                                         
Query: 113      agcagccagcacaaaagtactgaag 137
                |  ||||||||| ||||||||||||
Sbjct: 24593148 aaaagccagcaccaaagtactgaag 24593124



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 3        cctctcggtgtgccgacgcagtctgcccacccag 36
                ||||||||||| || ||||||||||| |||||||
Sbjct: 24594294 cctctcggtgttcccacgcagtctgctcacccag 24594261



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 108      aacccagcagccagcacaaaa 128
                |||||||||||||||||||||
Sbjct: 33814158 aacccagcagccagcacaaaa 33814138
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>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1014_H03
          Length = 132696

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 53     atgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaaccc 112
              ||||||||||| | || ||| | ||||||||||||||||| || || |||||||||||||
Sbjct: 107309 atgacaagtactcacgccagagatacctgttgaagaagagattcgggttgctgccaaccc 107250

                                       
Query: 113    agcagccagcacaaaagtactgaag 137
              |  ||||||||| ||||||||||||
Sbjct: 107249 aaaagccagcaccaaagtactgaag 107225



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 3      cctctcggtgtgccgacgcagtctgcccacccag 36
              ||||||||||| || ||||||||||| |||||||
Sbjct: 108395 cctctcggtgttcccacgcagtctgctcacccag 108362
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>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C01
          Length = 124548

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                         
Query: 53    atgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggattgctgccaaccc 112
             ||||||||||| | || ||| | ||||||||||||||||| || || |||||||||||||
Sbjct: 37757 atgacaagtactcacgccagagatacctgttgaagaagagattcgggttgctgccaaccc 37698

                                      
Query: 113   agcagccagcacaaaagtactgaag 137
             |  ||||||||| ||||||||||||
Sbjct: 37697 aaaagccagcaccaaagtactgaag 37673



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 3     cctctcggtgtgccgacgcagtctgcccacccag 36
             ||||||||||| || ||||||||||| |||||||
Sbjct: 38843 cctctcggtgttcccacgcagtctgctcacccag 38810
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>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069,
             complete sequence
          Length = 103659

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 83    tgaagaagaggtttggattgctgccaacccagcagcca 120
             |||||||| | ||||||||||| |||||||||||||||
Sbjct: 47981 tgaagaagcgatttggattgctaccaacccagcagcca 47944
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>gb|DQ430309.1| Sorghum bicolor voucher PI585454 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430308.1| Sorghum bicolor voucher PI267539 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430307.1| Sorghum bicolor voucher PI267408 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430306.1| Sorghum bicolor voucher PI221607 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430305.1| Sorghum bicolor voucher PI152702 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430304.1| Sorghum bicolor voucher NSL92371 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430303.1| Sorghum bicolor voucher NSL87902b locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430302.1| Sorghum bicolor voucher NSL87902a locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430301.1| Sorghum bicolor voucher NSL87666 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430300.1| Sorghum bicolor voucher NSL77217 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430299.1| Sorghum bicolor voucher NSL77034 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430298.1| Sorghum bicolor voucher NSL56174 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430297.1| Sorghum bicolor voucher NSL56003 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430296.1| Sorghum bicolor voucher NSL55243 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430295.1| Sorghum bicolor voucher NSL51365 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430294.1| Sorghum bicolor voucher NSL51030 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430293.1| Sorghum bicolor voucher NSL50875 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430292.1| Sorghum bicolor voucher BTx623 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>ref|XM_514308.1| PREDICTED: Pan troglodytes similar to KIAA0470 protein (LOC457861),
           mRNA
          Length = 1770

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 418 cagcacaaaactactgaagcactgaa 443
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>gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, complete sequence
          Length = 193579

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 305    gctctctgtgtgactttcatttggga 330
              |||||||||||| |||||||||||||
Sbjct: 107049 gctctctgtgtgtctttcatttggga 107074
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>gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complete sequence
          Length = 157951

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 119   cagcacaaaagtactgaagcactgaa 144
             |||||||||| |||||||||||||||
Sbjct: 62127 cagcacaaaactactgaagcactgaa 62152
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>ref|NM_014812.1| Homo sapiens centrosomal protein 170kDa (CEP170), mRNA
          Length = 6830

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>ref|XM_496715.2| PREDICTED: Homo sapiens centrosomal protein 170kDa-like (CEP170L),
           mRNA
          Length = 252

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 202 cagcacaaaactactgaagcactgaa 227
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>gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, complete sequence
          Length = 155355

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 119   cagcacaaaagtactgaagcactgaa 144
             |||||||||| |||||||||||||||
Sbjct: 90521 cagcacaaaactactgaagcactgaa 90496
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>dbj|AB007939.1| Homo sapiens mRNA for KIAA0470 protein, partial cds
          Length = 6456

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>gb|BC050722.1| Homo sapiens centrosomal protein 170kDa, mRNA (cDNA clone
           IMAGE:6067305), partial cds
          Length = 1667

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 774 cagcacaaaactactgaagcactgaa 799
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>dbj|AB022659.1| Homo sapiens mRNA for KARP-1-binding protein 3, complete cds
          Length = 6456

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>dbj|AB022658.1| Homo sapiens mRNA for KARP-1-binding protein 2 (KAB2), complete cds
          Length = 6536

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>dbj|AB022657.1| Homo sapiens mRNA for KARP-1-binding protein 1 (KAB1), complete cds
          Length = 6830

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 cagcacaaaagtactgaagcactgaa 144
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complete sequence
          Length = 168515

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   taagagatctgtttactttgg 175
             |||||||||||||||||||||
Sbjct: 55308 taagagatctgtttactttgg 55288
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>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1695_H09
          Length = 114721

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   aacccagcagccagcacaaaa 128
             |||||||||||||||||||||
Sbjct: 30736 aacccagcagccagcacaaaa 30716
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>gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosome 17, complete
             sequence
          Length = 193418

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gattgctgccaacccagcag 117
             ||||||||||||||||||||
Sbjct: 19112 gattgctgccaacccagcag 19131
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>gb|AC129320.5| Mus musculus BAC clone RP24-133J7 from chromosome 16, complete sequence
          Length = 183323

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    tgtgtgactttcatttggga 330
              ||||||||||||||||||||
Sbjct: 115905 tgtgtgactttcatttggga 115924
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>gb|AC164551.2| Mus musculus BAC clone RP23-365G9 from chromosome 16, complete sequence
          Length = 215805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    tgtgtgactttcatttggga 330
              ||||||||||||||||||||
Sbjct: 122719 tgtgtgactttcatttggga 122700
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>emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, complete sequence
          Length = 177056

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   tgtttactttggtgaatgct 183
             ||||||||||||||||||||
Sbjct: 61876 tgtttactttggtgaatgct 61895
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>emb|BX538242.1|HSM806479 Homo sapiens genomic DNA; cDNA DKFZp686F08109 (from clone
            DKFZp686F08109)
          Length = 8691

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  tgaatgtaatgctatgatattatg 281
            ||||||||||||||||| ||||||
Sbjct: 5362 tgaatgtaatgctatgacattatg 5339
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      gtctgcccacccagctcgtt 42
               ||||||||||||||||||||
Sbjct: 6397839 gtctgcccacccagctcgtt 6397820
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>gb|DQ430310.1| Sorghum propinquum locus pSB1901 genomic sequence
          Length = 928

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 103 ctgccaacccagcagccagcacaaaagtactgaagc 138
           |||||||||||| ||||| |||  ||||||||||||
Sbjct: 920 ctgccaacccagaagccaccactgaagtactgaagc 885
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>gb|AC092171.4| Homo sapiens BAC clone RP11-1275H24 from 7, complete sequence
          Length = 85132

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ctgccaacccagcagccagc 122
             ||||||||||||||||||||
Sbjct: 37833 ctgccaacccagcagccagc 37814
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>gb|AC097632.2| Homo sapiens chromosome 3 clone RP11-90H15, complete sequence
          Length = 131796

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 258   tgaatgtaatgctatgatattatg 281
             ||||||||||||||||| ||||||
Sbjct: 50708 tgaatgtaatgctatgacattatg 50731
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>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22,
             complete sequence
          Length = 165445

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   tgtttactttggtgaatgct 183
             ||||||||||||||||||||
Sbjct: 10205 tgtttactttggtgaatgct 10186
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>gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, complete sequence
          Length = 173772

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tgtgtgactttcatttggga 330
             ||||||||||||||||||||
Sbjct: 86316 tgtgtgactttcatttggga 86335
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>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence
          Length = 157468

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    tatggatcgtactcttatgt 297
              ||||||||||||||||||||
Sbjct: 150781 tatggatcgtactcttatgt 150762
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>gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome 17, complete sequence
          Length = 208318

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gattgctgccaacccagcag 117
              ||||||||||||||||||||
Sbjct: 155986 gattgctgccaacccagcag 156005
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>emb|AL844562.3| Mouse DNA sequence from clone RP23-230F7 on chromosome 2, complete
              sequence
          Length = 208058

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    atgtgctctctgtgtgactttcat 324
              ||||| ||||||||||||||||||
Sbjct: 175638 atgtggtctctgtgtgactttcat 175661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,538,038
Number of Sequences: 3902068
Number of extensions: 2538038
Number of successful extensions: 49830
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49722
Number of HSP's gapped (non-prelim): 104
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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