ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdh01 |
|---|---|
| Clone Library Name | barley_pub |
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 199 bits (505), Expect = 6e-51 Identities = 103/196 (52%), Positives = 134/196 (68%), Gaps = 7/196 (3%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMD-RGGDRIAYVQFPQR 185 KAGAMNALVR + V++N PF+LNLDCDHYV NS+A RE MCF+MD + G ++ YVQFPQR Sbjct: 500 KAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQR 559 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEHG--- 356 F+GID +DRYAN NTVFFD+NM+ LDG+ GPVYVGTGC+F+R ALYG++PP+ + Sbjct: 560 FDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMI 619 Query: 357 --GCCSCCFPKKRKIKSTVSSATSEETRALRMADFDDEE-MNMSTFPKRFGNSNFLINSI 527 GCC CF ++RK K + + + AL A+ D E M+ F K FG S+ + S Sbjct: 620 SCGCCP-CFGRRRKNKKFSKNDMNGDVAALGGAEGDKEHLMSEMNFEKTFGQSSIFVTS- 677 Query: 528 PIAEFQGRPLADHPGV 575 + E G P + P V Sbjct: 678 TLMEEGGVPPSSSPAV 693
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 187 bits (476), Expect = 1e-47 Identities = 93/196 (47%), Positives = 125/196 (63%), Gaps = 24/196 (12%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMD-RGGDRIAYVQFPQR 185 KAGAMN+L+R SAV+SN P++LN+DCDHY+ NS+A RE MCFMMD + G +I YVQFPQR Sbjct: 544 KAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKKICYVQFPQR 603 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEHGG-- 359 F+GID DRY+N N VFFD+NM+ LDG+ GP+YVGTGC+FRR ALYGFD P+ + G Sbjct: 604 FDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAPKKKQPPGRT 663 Query: 360 -------CCSCCFPKKR---KIKSTVSSATSEETRALRMADFDDEEMNMST--------- 482 CC CC +K+ K+K E ++ + + +E + ++ Sbjct: 664 CNCWPKWCCLCCGMRKKKTGKVKDNQRKKPKETSKQIHALEHIEEGLQVTNAENNSETAQ 723 Query: 483 --FPKRFGNSNFLINS 524 K+FG S L+ S Sbjct: 724 LKLEKKFGQSPVLVAS 739
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 187 bits (476), Expect = 1e-47 Identities = 90/163 (55%), Positives = 115/163 (70%), Gaps = 15/163 (9%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMD-RGGDRIAYVQFPQR 185 KAGAMN+L+R SAV+SN P++LN+DCDHY+ NS+A RE MCFMMD + G ++ YVQFPQR Sbjct: 539 KAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIRESMCFMMDPQSGKKVCYVQFPQR 598 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEHGG-- 359 F+GID DRY+N N VFFD+NM+ LDG+ GP+YVGTGC+FRR ALYGFD P+ + G Sbjct: 599 FDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAPKKKKPPGKT 658 Query: 360 -------CCSCCFPKKR-----KIKSTVSSATSEETRALRMAD 452 CC CC +K+ K K T + TS++ AL D Sbjct: 659 CNCWPKWCCLCCGLRKKSKTKAKDKKTNTKETSKQIHALENVD 701
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 187 bits (474), Expect = 2e-47 Identities = 101/196 (51%), Positives = 124/196 (63%), Gaps = 24/196 (12%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMDRG-GDRIAYVQFPQR 185 KAGAMNALVR SAV++NGPFILNLDCDHY+ NS+A RE MCF+MD G ++ YVQFPQR Sbjct: 521 KAGAMNALVRVSAVLTNGPFILNLDCDHYINNSKALREAMCFLMDPNLGKQVCYVQFPQR 580 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEH---- 353 F+GID +DRYAN NTVFFD+N+R LDG+ GPVYVGTGC+F R ALYG++PP +H Sbjct: 581 FDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKVKHKKPS 640 Query: 354 --GGCCSCCFPKKRKIK-------------STVSSATSEE-TRALRMADFDDEE---MNM 476 C K K K STV ++ + A FDDE+ M+ Sbjct: 641 LLSKLCGGSRKKNSKAKKESDKKKSGRHTDSTVPVFNLDDIEEGVEGAGFDDEKALLMSQ 700 Query: 477 STFPKRFGNSNFLINS 524 + KRFG S + S Sbjct: 701 MSLEKRFGQSAVFVAS 716
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 180 bits (456), Expect = 3e-45 Identities = 81/126 (64%), Positives = 100/126 (79%), Gaps = 1/126 (0%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMD-RGGDRIAYVQFPQR 185 KAGAMN+L+R S V+SN P++LN+DCDHY+ NS+A RE MCFMMD + G +I YVQFPQR Sbjct: 526 KAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQR 585 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEHGGCC 365 F+GID SDRY+N N VFFD+NM+ LDGL GP+YVGTGC+FRR ALYGFD P+ + Sbjct: 586 FDGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAPKKKKTKRMT 645 Query: 366 SCCFPK 383 C+PK Sbjct: 646 CNCWPK 651
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 178 bits (452), Expect = 9e-45 Identities = 101/189 (53%), Positives = 119/189 (62%), Gaps = 17/189 (8%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMDRG-GDRIAYVQFPQR 185 KAGA NALVR SAV++N PFILNLDCDHYV NS+A RE MCF+MD G + +VQFPQR Sbjct: 446 KAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGQDVCFVQFPQR 505 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDP---PRSTEHG 356 F+GID SDRYAN N VFFDVNMR LDG+ GPVYVGTG +FRR ALYG+ P PR Sbjct: 506 FDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGTGTVFRRQALYGYSPPSKPRILPQS 565 Query: 357 GCCSCCFPKKRKIKSTVS----SATSEETRA--LRMADFDDEE-------MNMSTFPKRF 497 SCC K+K S A EE A + D D+ + ++ ++F K F Sbjct: 566 SSSSCCCLTKKKQPQDPSEIYKDAKREELDAAIFNLGDLDNYDEYDRSMLISQTSFEKTF 625 Query: 498 GNSNFLINS 524 G S I S Sbjct: 626 GLSTVFIES 634
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 177 bits (449), Expect = 2e-44 Identities = 87/148 (58%), Positives = 105/148 (70%), Gaps = 10/148 (6%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMD-RGGDRIAYVQFPQR 185 KAGAMNA+VR SAV++N PF+LNLDCDHY+ NS+A RE MCF+MD + G ++ YVQFPQR Sbjct: 477 KAGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQR 536 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEH---- 353 F+GID +DRYAN N VFFD+NMR LDG+ GPVYVGTGC+F R ALYG++PP S + Sbjct: 537 FDGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRKKMT 596 Query: 354 -----GGCCSCCFPKKRKIKSTVSSATS 422 C CC R KS S S Sbjct: 597 CDCWPSWICCCCGGGNRNHKSDSSKKKS 624
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 177 bits (448), Expect = 3e-44 Identities = 80/126 (63%), Positives = 99/126 (78%), Gaps = 1/126 (0%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMD-RGGDRIAYVQFPQR 185 KAGAMN+L+R S V+SN P++LN+DCDHY+ NS+A RE MCFMMD + G +I YVQFPQR Sbjct: 538 KAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQR 597 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTEHGGCC 365 F+GID DRY+N N VFFD+NM+ LDGL GP+YVGTGC+FRR ALYGFD P+ + Sbjct: 598 FDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAPKKKKGPRKT 657 Query: 366 SCCFPK 383 C+PK Sbjct: 658 CNCWPK 663
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 171 bits (434), Expect = 1e-42 Identities = 86/160 (53%), Positives = 109/160 (68%), Gaps = 4/160 (2%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMDRG-GDRIAYVQFPQR 185 KAGAMNAL+R SAV++NG ++LN+DCDHY NS+A +E MCFMMD G + YVQFPQR Sbjct: 524 KAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQR 583 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDP---PRSTEHG 356 F+GID DRYAN NTVFFD+N++ LDG+ GPVYVGTGC F R ALYG+DP E Sbjct: 584 FDGIDLHDRYANRNTVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPN 643 Query: 357 GCCSCCFPKKRKIKSTVSSATSEETRALRMADFDDEEMNM 476 CF ++K KS E+ R+++ +D + NM Sbjct: 644 IIVKSCFGSRKKGKSR-KIPNYEDNRSIKRSDSNVPLFNM 682
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 169 bits (427), Expect = 7e-42 Identities = 94/195 (48%), Positives = 118/195 (60%), Gaps = 25/195 (12%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMDRG-GDRIAYVQFPQR 185 KAGAMNAL+R SAV++NG ++LN+DCDHY NS+A +E MCFMMD G + YVQFPQR Sbjct: 537 KAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQR 596 Query: 186 FEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVALYGFDPPRSTE----H 353 F+GID DRYAN N VFFD+NM+ LDG+ GPVYVGTGC F R ALYG+DP + E + Sbjct: 597 FDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPN 656 Query: 354 GGCCSCCFPKKRKIKSTVSSATSEETRALRMAD-----------------FDDEE---MN 473 SCC +K+ S E+ R + +D +DDE M+ Sbjct: 657 IIVKSCCGSRKKGKSS--KKYNYEKRRGINRSDSNAPLFNMEDIDEGFEGYDDERSILMS 714 Query: 474 MSTFPKRFGNSNFLI 518 + KRFG S I Sbjct: 715 QRSVEKRFGQSPVFI 729
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFRE-GMCFMM-DRGGDRIAYVQFPQ 182 KAG +N ++ ++ G +IL LDCDH ++AF + M +M+ DR +IA +Q P Sbjct: 216 KAGNLNHAIKRTS----GDYILILDCDH--IPTRAFLQIAMGWMVADR---KIALMQTPH 266 Query: 183 RFEGIDPSDR 212 F DP R Sbjct: 267 HFYSPDPFQR 276
>BCSA2_ACEXY (O82859) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 756 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFRE-GMCFMM-DRGGDRIAYVQFPQ 182 KAG +N ++ ++ G +IL LDCDH ++AF + M +M+ DR +IA +Q P Sbjct: 218 KAGNLNHAIKRTS----GDYILILDCDH--IPTRAFLQIAMGWMVADR---KIALMQTPH 268 Query: 183 RFEGIDPSDR 212 F DP R Sbjct: 269 HFYSPDPFQR 278
>BCSA_XANAC (P58932) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 729 Score = 31.6 bits (70), Expect = 1.8 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFREGMCFMMDRGGDRIAYVQFPQRF 188 KAG +NA ++ + G ++ DCDH S F+ D ++A VQ P F Sbjct: 220 KAGNINAALKKCS----GDYVAIFDCDHIPTRSFLQVAMGWFLHD---TKLALVQMPHYF 272 Query: 189 EGIDPSDR-------YANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRVAL 320 DP +R N +F+ + D + G+ + +R AL Sbjct: 273 FSPDPFERNLDTHGKVPNEGELFYGLLQDGNDQWNATFFCGSCAVIKRTAL 323
>ACSA1_ACEXY (P21877) Cellulose synthase 1 [Includes: Cellulose synthase| catalytic domain [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 1 regulatory domain)] Length = 1550 Score = 30.4 bits (67), Expect = 3.9 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 8/112 (7%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFRE-GMCFMMDRGGDRIAYVQFPQR 185 KAG +N + + +G +IL DCDH ++AF + M +M++ +IA +Q P Sbjct: 216 KAGNLNYAIGHT----DGDYILIFDCDH--VPTRAFLQLTMGWMVE--DPKIALMQTPHH 267 Query: 186 FEGIDPSDRYAN-------HNTVFFDVNMRALDGLMGPVYVGTGCLFRRVAL 320 F DP R + +F+ V D + G+ + RR A+ Sbjct: 268 FYSPDPFQRNLSAGYRTPPEGNLFYGVVQDGNDFWDATFFCGSCAILRRTAI 319
>TXK_HUMAN (P42681) Tyrosine-protein kinase TXK (EC 2.7.10.2)| Length = 527 Score = 30.4 bits (67), Expect = 3.9 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +3 Query: 360 CCSCCFPKKRKIKSTVSSATSEE 428 CC CC +KR++++ +S +T EE Sbjct: 15 CCCCCSVQKRQMRTQISLSTDEE 37
>Y4JB_RHISN (P55502) Hypothetical 16.7 kDa protein y4jB| Length = 152 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/53 (28%), Positives = 30/53 (56%) Frame = +3 Query: 420 SEETRALRMADFDDEEMNMSTFPKRFGNSNFLINSIPIAEFQGRPLADHPGVK 578 ++E +AL +A+ + + N+S +RFG + L+N+ A Q P+ P ++ Sbjct: 38 TDEEKALMLAESAEPDANISAIARRFGVNRGLLNTWRRAAGQIGPVLGEPALE 90
>RPOB_BDEBA (Q6MJ09) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1412 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Frame = +3 Query: 423 EETRALRMADFDDEEMNMSTFPKRFGNSNFLINS---IPIAEFQGRP--LADHPGVKN 581 EET A + D ++E+ + P N +F+IN + +++ P DH G KN Sbjct: 125 EETEARSIRDVKEQEVYLGEIPLMTANGSFIINGTERVVVSQLHRSPGVFFDHDGGKN 182
>HXA9_FUGRU (O42506) Homeobox protein Hox-A9 (HoxA-9)| Length = 283 Score = 29.3 bits (64), Expect = 8.7 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = -3 Query: 198 QCPRTVGGTGHRQYGHHHGP 139 Q P TV H YGHH GP Sbjct: 72 QFPGTVSSVYHHHYGHHQGP 91
>GELS_HORSE (Q28372) Gelsolin (Actin-depolymerizing factor) (ADF) (Brevin)| Length = 730 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +3 Query: 3 TXKAGAMNALVRSSAVMSNG--PFILNLDCDHYVYNSQAFREGMCFMMDRGGDRIAYV 170 T K A N + +SNG P +++L D + A R CF++D G D +V Sbjct: 235 TVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFV 292
>BCSA3_ACEXY (Q9WX61) Cellulose synthase 1 catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 745 Score = 29.3 bits (64), Expect = 8.7 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +3 Query: 9 KAGAMNALVRSSAVMSNGPFILNLDCDHYVYNSQAFRE-GMCFMMDRGGDRIAYVQFPQR 185 KAG +N ++ + G IL LDCDH ++AF + M +M+ IA +Q P Sbjct: 216 KAGNLNYAIKHTT----GDHILILDCDH--IPTRAFLQISMGWMV--SDSNIALLQTPHH 267 Query: 186 FEGIDPSDR 212 F DP R Sbjct: 268 FYSPDPFQR 276
>GPR37_HUMAN (O15354) Probable G-protein coupled receptor 37 precursor| (Endothelin B receptor-like protein 1) (ETBR-LP-1) (Parkin-associated endothelin receptor-like receptor) (PAELR) Length = 613 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 312 VALYGFDPPRSTEHGGCCSCCFPKKRKIKSTVSS--ATSEETRALRMADFDDEEMNMSTF 485 V L+ P S CC CC + + STV+S +E T L ++ F MSTF Sbjct: 547 VLLFCLCKPFSRAFMECCCCCCEECIQKSSTVTSDDNDNEYTTELELSPFSTIRREMSTF 606 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,923,687 Number of Sequences: 219361 Number of extensions: 1775519 Number of successful extensions: 4280 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4261 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
