Clone Name | basdh01 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185396.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3968 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 2229 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 2288 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2289 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 2348 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 2349 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 2408 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 2409 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 2468 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 2469 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 2528 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 2529 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 2588 Query: 369 tgttgctt 376 |||||||| Sbjct: 2589 tgttgctt 2596 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 2632 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 2691 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2692 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 2751 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 2752 aattccaagggcgacctcttgctgaccatcctgg 2785
>tpg|BK000090.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like D2 gene, complete cds Length = 5000 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 2948 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 3007 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 3008 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 3067 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 3068 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 3127 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 3128 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 3187 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 3188 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 3247 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 3248 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 3307 Query: 369 tgttgctt 376 |||||||| Sbjct: 3308 tgttgctt 3315 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 3351 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 3410 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 3411 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 3470 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 3471 aattccaagggcgacctcttgctgaccatcctgg 3504
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Minus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 661120 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 661061 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 661060 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 661001 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 661000 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 660941 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 660940 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 660881 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 660880 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 660821 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 660820 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 660761 Query: 369 tgttgctt 376 |||||||| Sbjct: 660760 tgttgctt 660753 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 660717 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 660658 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 660657 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 660598 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 660597 aattccaagggcgacctcttgctgaccatcctgg 660564 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || ||||||||||| || || || || || ||||||||||||||||||| Sbjct: 13259222 tccagttcccgcagcggttcgaggggatcgacccctccgaccgctacgccaaccacaaca 13259281 Query: 229 ctgtcttctttgatgtcaacatgcg 253 | |||||||| || | ||||||||| Sbjct: 13259282 ccgtcttcttcgacggcaacatgcg 13259306
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Minus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 67548 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 67489 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 67488 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 67429 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 67428 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 67369 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 67368 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 67309 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 67308 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 67249 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 67248 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 67189 Query: 369 tgttgctt 376 |||||||| Sbjct: 67188 tgttgctt 67181 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 67145 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 67086 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 67085 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 67026 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 67025 aattccaagggcgacctcttgctgaccatcctgg 66992
>dbj|AK105393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B04, full insert sequence Length = 4089 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 2118 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 2177 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2178 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 2237 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 2238 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 2297 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 2298 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 2357 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 2358 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 2417 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 2418 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 2477 Query: 369 tgttgctt 376 |||||||| Sbjct: 2478 tgttgctt 2485 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 2521 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 2580 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2581 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 2640 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 2641 aattccaagggcgacctcttgctgaccatcctgg 2674
>dbj|AK102695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103F21, full insert sequence Length = 2757 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 924 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 983 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 984 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 1043 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 1044 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 1103 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 1104 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 1163 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1164 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 1223 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 1224 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 1283 Query: 369 tgttgctt 376 |||||||| Sbjct: 1284 tgttgctt 1291 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 1327 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 1386 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1387 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 1446 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 1447 aattccaagggcgacctcttgctgaccatcctgg 1480
>dbj|AK102134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085F12, full insert sequence Length = 3968 Score = 412 bits (208), Expect = e-112 Identities = 328/368 (89%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 2229 aaggctggtgcgatgaatgcgttggtccgctcatctgctgtcatgtcaaatggacctttc 2288 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2289 atcctcaaccttgattgtgatcactatgtttacaactcacaagctttccgtgaaggcatg 2348 Query: 129 tgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttc 188 |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 2349 tgcttcatgatggatcgtggtggtgaccgtattggctatgtccagttccctcaacggttt 2408 Query: 189 gagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaac 248 ||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 2409 gagggcattgatccatcagatcgatatgctaaccacaacactgtcttcttcgatgtcaac 2468 Query: 249 atgcgtgcattggatggtctcatgggaccagtctatgtcggcactggctgtctgttccgg 308 ||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 2469 atgcgtgcacttgatggtatcatgggaccagtctacgtcggcactggatgtcttttccgt 2528 Query: 309 cgtgttgcactctatggatttgaccctccacgctccacagagcacggtggctgctgcagc 368 || | || | |||||||||||||| || ||||||| || || |||| ||||||||| Sbjct: 2529 cgcatcgctttgtatggatttgacccaccgcgctccaaggaacatagtggttgctgcagc 2588 Query: 369 tgttgctt 376 |||||||| Sbjct: 2589 tgttgctt 2596 Score = 155 bits (78), Expect = 2e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 418 catctgaagagacacgggctctgcggatggcagattttgatgatgaggagatgaacatgt 477 |||||||||||| | |||| || | ||||||||||||||||||||||| |||||||||| Sbjct: 2632 catctgaagagaggcaggctttgagaatggcagattttgatgatgaggaaatgaacatgt 2691 Query: 478 caacatttcccaagaggttcggtaactcaaacttcctcatcaactctataccgattgccg 537 || ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2692 cacaatttcccaagaagttcggtaattcaaacttcctcatcaactctatcccaattgctg 2751 Query: 538 agttccaagggcgcccgcttgctgatcaccctgg 571 | ||||||||||| || |||||||| || ||||| Sbjct: 2752 aattccaagggcgacctcttgctgaccatcctgg 2785
>ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNTHASE-LIKE 3); cellulose synthase/ transferase, transferring glycosyl groups AT3G03050 (CSLD3) mRNA, complete cds Length = 4206 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 ||||||||||| || || ||||||||||| | ||||||||||||||||| | ||||| Sbjct: 2384 ttcatactcaatcttgattgtgatcattacatatacaactctcaagctttaagagaagga 2443 Query: 126 atgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacgg 185 ||||| ||||||||||| || ||||||||||| || |||||| |||||||| |||||| Sbjct: 2444 atgtgtttcatgatggatcgaggtggtgaccggctttgctatgttcagttcccacaacgg 2503 Query: 186 ttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtc 245 || || || ||||| ||||||||||| || || || |||||||| |||||||||||||| Sbjct: 2504 tttgaaggtattgacccatcagatcgttatgcgaatcacaacacagtcttctttgatgtg 2563 Query: 246 aacatg 251 |||||| Sbjct: 2564 aacatg 2569 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 532 ttgccgagttccaagggcgcccgcttgctgatcaccc 568 |||||||||||||||| || || ||||| |||||||| Sbjct: 2844 ttgccgagttccaaggtcgtcctcttgcggatcaccc 2880
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 ||||||||||| || || ||||||||||| | ||||||||||||||||| | ||||| Sbjct: 90680 ttcatactcaatcttgattgtgatcattacatatacaactctcaagctttaagagaagga 90621 Query: 126 atgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacgg 185 ||||| ||||||||||| || ||||||||||| || |||||| |||||||| |||||| Sbjct: 90620 atgtgtttcatgatggatcgaggtggtgaccggctttgctatgttcagttcccacaacgg 90561 Query: 186 ttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtc 245 || || || ||||| ||||||||||| || || || |||||||| |||||||||||||| Sbjct: 90560 tttgaaggtattgacccatcagatcgttatgcgaatcacaacacagtcttctttgatgtg 90501 Query: 246 aacatg 251 |||||| Sbjct: 90500 aacatg 90495 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 532 ttgccgagttccaagggcgcccgcttgctgatcaccc 568 |||||||||||||||| || || ||||| |||||||| Sbjct: 90220 ttgccgagttccaaggtcgtcctcttgcggatcaccc 90184
>gb|AY039996.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit (At3g03050) mRNA, complete cds Length = 3438 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 ||||||||||| || || ||||||||||| | ||||||||||||||||| | ||||| Sbjct: 1885 ttcatactcaatcttgattgtgatcattacatatacaactctcaagctttaagagaagga 1944 Query: 126 atgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacgg 185 ||||| ||||||||||| || ||||||||||| || |||||| |||||||| |||||| Sbjct: 1945 atgtgtttcatgatggatcgaggtggtgaccggctttgctatgttcagttcccacaacgg 2004 Query: 186 ttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtc 245 || || || ||||| ||||||||||| || || || |||||||| |||||||||||||| Sbjct: 2005 tttgaaggtattgacccatcagatcgttatgcgaatcacaacacagtcttctttgatgtg 2064 Query: 246 aacatg 251 |||||| Sbjct: 2065 aacatg 2070 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 532 ttgccgagttccaagggcgcccgcttgctgatcaccc 568 |||||||||||||||| || || ||||| |||||||| Sbjct: 2345 ttgccgagttccaaggtcgtcctcttgcggatcaccc 2381
>gb|AF360180.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit (At3g03050) mRNA, complete cds Length = 3962 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 ||||||||||| || || ||||||||||| | ||||||||||||||||| | ||||| Sbjct: 2137 ttcatactcaatcttgattgtgatcattacatatacaactctcaagctttaagagaagga 2196 Query: 126 atgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacgg 185 ||||| ||||||||||| || ||||||||||| || |||||| |||||||| |||||| Sbjct: 2197 atgtgtttcatgatggatcgaggtggtgaccggctttgctatgttcagttcccacaacgg 2256 Query: 186 ttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtc 245 || || || ||||| ||||||||||| || || || |||||||| |||||||||||||| Sbjct: 2257 tttgaaggtattgacccatcagatcgttatgcgaatcacaacacagtcttctttgatgtg 2316 Query: 246 aacatg 251 |||||| Sbjct: 2317 aacatg 2322 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 532 ttgccgagttccaagggcgcccgcttgctgatcaccc 568 |||||||||||||||| || || ||||| |||||||| Sbjct: 2597 ttgccgagttccaaggtcgtcctcttgcggatcaccc 2633
>emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene for cellulose synthase-like protein, exons 1-3 Length = 5385 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 ||||||||||| || || ||||||||||| | ||||||||||||||||| | ||||| Sbjct: 3409 ttcatactcaatcttgattgtgatcattacatatacaactctcaagctttaagagaagga 3468 Query: 126 atgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacgg 185 ||||| ||||||||||| || ||||||||||| || |||||| |||||||| |||||| Sbjct: 3469 atgtgtttcatgatggatcgaggtggtgaccggctttgctatgttcagttcccacaacgg 3528 Query: 186 ttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtc 245 || || || ||||| ||||||||||| || || || |||||||| |||||||||||||| Sbjct: 3529 tttgaaggtattgacccatcagatcgttatgcgaatcacaacacagtcttctttgatgtg 3588 Query: 246 aacatg 251 |||||| Sbjct: 3589 aacatg 3594 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 532 ttgccgagttccaagggcgcccgcttgctgatcaccc 568 |||||||||||||||| || || ||||| |||||||| Sbjct: 3869 ttgccgagttccaaggtcgtcctcttgcggatcaccc 3905
>gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synthase-like CSLD3 (CslD3) mRNA, complete cds Length = 3827 Score = 131 bits (66), Expect = 3e-27 Identities = 156/186 (83%) Strand = Plus / Plus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 ||||||||||| || || ||||||||||| | ||||||||||||||||| | ||||| Sbjct: 2133 ttcatactcaatcttgattgtgatcattacatatacaactctcaagctttaagagaagga 2192 Query: 126 atgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacgg 185 ||||| ||||||||||| || ||||||||||| || ||| || |||||||| |||||| Sbjct: 2193 atgtgtttcatgatggatcgaggtggtgaccggctttgctacgttcagttcccacaacgg 2252 Query: 186 ttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtc 245 || || || ||||| ||||||||||| || || || |||||||| |||||||||||||| Sbjct: 2253 tttgaaggtattgacccatcagatcgttatgcgaatcacaacacagtcttctttgatgtg 2312 Query: 246 aacatg 251 |||||| Sbjct: 2313 aacatg 2318 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 532 ttgccgagttccaagggcgcccgcttgctgatcaccc 568 |||||||||||||||| || || ||||| |||||||| Sbjct: 2593 ttgccgagttccaaggtcgtcctcttgcggatcaccc 2629
>ref|NM_197900.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0035H01.10), mRNA Length = 3384 Score = 125 bits (63), Expect = 2e-25 Identities = 210/259 (81%) Strand = Plus / Plus Query: 49 tcatgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctc 108 ||||||| || || || ||||| |||||||||||||| || || || || |||||||| Sbjct: 1805 tcatgtccaacgggccgttcatcctcaacctggactgcgaccactacgtgtacaactcca 1864 Query: 109 aagctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatg 168 | || ||||| || || |||||||||||||||||||| || || ||||| | ||| | Sbjct: 1865 aggcgttccgggaggggatgtgcttcatgatggaccgcggcggcgaccgcctctgctacg 1924 Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || || ||||||||||| || || || || ||||||||||||||||||| Sbjct: 1925 tccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaaca 1984 Query: 229 ctgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctatgtcg 288 | |||||||| || ||||||||||| || | ||||| ||| ||| || |||||||||| Sbjct: 1985 ccgtcttcttcgacgtcaacatgcgcgccctcgatggcctccagggccccgtctatgtcg 2044 Query: 289 gcactggctgtctgttccg 307 | |||||||| || ||||| Sbjct: 2045 gaactggctgcctcttccg 2063
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 125 bits (63), Expect = 2e-25 Identities = 210/259 (81%) Strand = Plus / Plus Query: 49 tcatgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctc 108 ||||||| || || || ||||| |||||||||||||| || || || || |||||||| Sbjct: 59596 tcatgtccaacgggccgttcatcctcaacctggactgcgaccactacgtgtacaactcca 59655 Query: 109 aagctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatg 168 | || ||||| || || |||||||||||||||||||| || || ||||| | ||| | Sbjct: 59656 aggcgttccgggaggggatgtgcttcatgatggaccgcggcggcgaccgcctctgctacg 59715 Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || || ||||||||||| || || || || ||||||||||||||||||| Sbjct: 59716 tccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaaca 59775 Query: 229 ctgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctatgtcg 288 | |||||||| || ||||||||||| || | ||||| ||| ||| || |||||||||| Sbjct: 59776 ccgtcttcttcgacgtcaacatgcgcgccctcgatggcctccagggccccgtctatgtcg 59835 Query: 289 gcactggctgtctgttccg 307 | |||||||| || ||||| Sbjct: 59836 gaactggctgcctcttccg 59854
>tpg|BK000089.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like D1 gene, complete cds Length = 4188 Score = 125 bits (63), Expect = 2e-25 Identities = 210/259 (81%) Strand = Plus / Plus Query: 49 tcatgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctc 108 ||||||| || || || ||||| |||||||||||||| || || || || |||||||| Sbjct: 2074 tcatgtccaacgggccgttcatcctcaacctggactgcgaccactacgtgtacaactcca 2133 Query: 109 aagctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatg 168 | || ||||| || || |||||||||||||||||||| || || ||||| | ||| | Sbjct: 2134 aggcgttccgggaggggatgtgcttcatgatggaccgcggcggcgaccgcctctgctacg 2193 Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || || ||||||||||| || || || || ||||||||||||||||||| Sbjct: 2194 tccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaaca 2253 Query: 229 ctgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctatgtcg 288 | |||||||| || ||||||||||| || | ||||| ||| ||| || |||||||||| Sbjct: 2254 ccgtcttcttcgacgtcaacatgcgcgccctcgatggcctccagggccccgtctatgtcg 2313 Query: 289 gcactggctgtctgttccg 307 | |||||||| || ||||| Sbjct: 2314 gaactggctgcctcttccg 2332
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 2e-25 Identities = 210/259 (81%) Strand = Plus / Plus Query: 49 tcatgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctc 108 ||||||| || || || ||||| |||||||||||||| || || || || |||||||| Sbjct: 22543878 tcatgtccaacgggccgttcatcctcaacctggactgcgaccactacgtgtacaactcca 22543937 Query: 109 aagctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatg 168 | || ||||| || || |||||||||||||||||||| || || ||||| | ||| | Sbjct: 22543938 aggcgttccgggaggggatgtgcttcatgatggaccgcggcggcgaccgcctctgctacg 22543997 Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || || ||||||||||| || || || || ||||||||||||||||||| Sbjct: 22543998 tccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaaca 22544057 Query: 229 ctgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctatgtcg 288 | |||||||| || ||||||||||| || | ||||| ||| ||| || |||||||||| Sbjct: 22544058 ccgtcttcttcgacgtcaacatgcgcgccctcgatggcctccagggccccgtctatgtcg 22544117 Query: 289 gcactggctgtctgttccg 307 | |||||||| || ||||| Sbjct: 22544118 gaactggctgcctcttccg 22544136 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctt 238 |||||||||||||||| |||||| |||||||| Sbjct: 16749573 gatcgctacgccaaccgcaacaccgtcttctt 16749604 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 168 gtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaac 227 ||||||||||| || |||||||| ||| | ||||| || |||||||||||||||||| Sbjct: 9666618 gtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaac 9666559
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 2e-25 Identities = 210/259 (81%) Strand = Plus / Plus Query: 49 tcatgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctc 108 ||||||| || || || ||||| |||||||||||||| || || || || |||||||| Sbjct: 22556346 tcatgtccaacgggccgttcatcctcaacctggactgcgaccactacgtgtacaactcca 22556405 Query: 109 aagctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatg 168 | || ||||| || || |||||||||||||||||||| || || ||||| | ||| | Sbjct: 22556406 aggcgttccgggaggggatgtgcttcatgatggaccgcggcggcgaccgcctctgctacg 22556465 Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || || ||||||||||| || || || || ||||||||||||||||||| Sbjct: 22556466 tccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaaca 22556525 Query: 229 ctgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctatgtcg 288 | |||||||| || ||||||||||| || | ||||| ||| ||| || |||||||||| Sbjct: 22556526 ccgtcttcttcgacgtcaacatgcgcgccctcgatggcctccagggccccgtctatgtcg 22556585 Query: 289 gcactggctgtctgttccg 307 | |||||||| || ||||| Sbjct: 22556586 gaactggctgcctcttccg 22556604 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctt 238 |||||||||||||||| |||||| |||||||| Sbjct: 16758613 gatcgctacgccaaccgcaacaccgtcttctt 16758644 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 168 gtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaac 227 ||||||||||| || |||||||| ||| | ||||| || |||||||||||||||||| Sbjct: 9672657 gtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaac 9672598
>ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose synthase/ transferase, transferring glycosyl groups AT5G16910 (ATCSLD2) mRNA, complete cds Length = 3728 Score = 97.6 bits (49), Expect = 4e-17 Identities = 163/201 (81%) Strand = Plus / Plus Query: 51 atgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctcaa 110 |||||||||||||| ||||||||||| || |||||||||||||| | ||||||||| | Sbjct: 1879 atgtcaaatggaccgttcatactcaatcttgactgtgatcattacatatacaactctgag 1938 Query: 111 gctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtc 170 ||| | | ||||||||||| ||||||||||| | || || || ||| || ||| || Sbjct: 1939 gctctgagagaaggcatgtgtttcatgatggatagaggcggggatcgtctttgctacgtt 1998 Query: 171 cagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaacact 230 ||||| || || ||||| || || ||||| ||||| ||| | || || || ||||||||| Sbjct: 1999 cagtttccgcagcggtttgaaggtattgacccatctgatagatatgctaatcacaacact 2058 Query: 231 gtcttctttgatgtcaacatg 251 ||||||||||| ||||||||| Sbjct: 2059 gtcttctttgacgtcaacatg 2079
>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project) Length = 98101 Score = 97.6 bits (49), Expect = 4e-17 Identities = 163/201 (81%) Strand = Plus / Plus Query: 51 atgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctcaa 110 |||||||||||||| ||||||||||| || |||||||||||||| | ||||||||| | Sbjct: 20825 atgtcaaatggaccgttcatactcaatcttgactgtgatcattacatatacaactctgag 20884 Query: 111 gctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtc 170 ||| | | ||||||||||| ||||||||||| | || || || ||| || ||| || Sbjct: 20885 gctctgagagaaggcatgtgtttcatgatggatagaggcggggatcgtctttgctacgtt 20944 Query: 171 cagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaacact 230 ||||| || || ||||| || || ||||| ||||| ||| | || || || ||||||||| Sbjct: 20945 cagtttccgcagcggtttgaaggtattgacccatctgatagatatgctaatcacaacact 21004 Query: 231 gtcttctttgatgtcaacatg 251 ||||||||||| ||||||||| Sbjct: 21005 gtcttctttgacgtcaacatg 21025
>dbj|AP006132.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41P23, TM0230, complete sequence Length = 91079 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 184 ggttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatg 243 ||||||| || ||||| || || |||||||| ||||| |||||||||||||||||||||| Sbjct: 19207 ggttcgaaggaattgacccttctgatcgctatgccaatcacaacactgtcttctttgatg 19266 Query: 244 tcaacatgcgtgca 257 |||||||||||||| Sbjct: 19267 tcaacatgcgtgca 19280 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 49 tcatgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctc 108 ||||||| ||||| || ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 19072 tcatgtccaatggccctttcatactcaacctggactgtgaccattacatatacaactcaa 19131 Query: 109 aagctttccgtgaaggcatgtgcttcatgatggaccg 145 |||| || | ||||| || ||||||||||||||||| Sbjct: 19132 aagccttaagggaaggtatttgcttcatgatggaccg 19168
>gb|AF417486.1| Populus tremuloides cellulose synthase-like D1 protein gene, partial cds Length = 536 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 184 ggttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatg 243 ||||||| || ||||||||||| || ||||| ||||| ||||||||||| |||||||||| Sbjct: 23 ggttcgaaggaattgatccatctgaccgctatgccaatcacaacactgttttctttgatg 82 Query: 244 tcaacatgcg 253 |||||||||| Sbjct: 83 tcaacatgcg 92
>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence Length = 157258 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 195 attgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaacatgcg 253 ||||| ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| Sbjct: 136210 attgacccatcagatcggtatgccaatcacaacactgtcttctttgatgtcaatatgcg 136268
>gb|AF417487.1| Populus tremuloides cellulose synthase-like D2 protein gene, partial cds Length = 554 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 165 tatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccac 224 ||||| |||||||| || |||| |||||||| || || || ||||| || || || ||| Sbjct: 4 tatgttcagttccctcagaggtttgagggcatagacccttctgatcgatatgctaatcac 63 Query: 225 aacactgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctat 284 |||||||| || |||||||| ||||||||||| | |||||||| ||||| ||||||||| Sbjct: 64 aacactgtattttttgatgtgaacatgcgtgcccttgatggtctaatgggtccagtctat 123 Query: 285 gtcggcactgg 295 || || ||||| Sbjct: 124 gttggaactgg 134
>emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 on chromosome 3, complete sequence Length = 115456 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 195 attgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaacatgcg 253 ||||| ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| Sbjct: 58184 attgacccatcagatcggtatgccaatcacaacactgtcttctttgatgtcaatatgcg 58242
>ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose synthase/ transferase, transferring glycosyl groups AT2G33100 (ATCSLD1) mRNA, complete cds Length = 3286 Score = 75.8 bits (38), Expect = 1e-10 Identities = 155/194 (79%) Strand = Plus / Plus Query: 72 ctcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatgtgc 131 ||||| |||||||||||||| || | |||||||| ||||| || ||||| ||||| Sbjct: 1564 ctcaatctggactgtgatcactacatctacaactccaaagctatcaaagaaggaatgtgt 1623 Query: 132 ttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttcgag 191 |||||||||||||| ||||||||| | || ||| | ||||| || ||||||||||| Sbjct: 1624 ttcatgatggaccgaggtggtgacaggatctgttatattcagtttccacaacggttcgaa 1683 Query: 192 ggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaacatg 251 || || || ||||||||||| || || || ||||| ||||||||||| |||| |||||| Sbjct: 1684 ggaatcgacccatcagatcgatatgcaaatcacaatactgtcttcttcgatggtaacatg 1743 Query: 252 cgtgcattggatgg 265 | ||||| ||||| Sbjct: 1744 agagcattagatgg 1757
>dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cellulose synthase, partial cds, clone: RAFL22-49-F01 Length = 2586 Score = 75.8 bits (38), Expect = 1e-10 Identities = 155/194 (79%) Strand = Plus / Plus Query: 72 ctcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatgtgc 131 ||||| |||||||||||||| || | |||||||| ||||| || ||||| ||||| Sbjct: 920 ctcaatctggactgtgatcactacatctacaactccaaagctatcaaagaaggaatgtgt 979 Query: 132 ttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttcgag 191 |||||||||||||| ||||||||| | || ||| | ||||| || ||||||||||| Sbjct: 980 ttcatgatggaccgaggtggtgacaggatctgttatattcagtttccacaacggttcgaa 1039 Query: 192 ggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgtcaacatg 251 || || || ||||||||||| || || || ||||| ||||||||||| |||| |||||| Sbjct: 1040 ggaatcgacccatcagatcgatatgcaaatcacaatactgtcttcttcgatggtaacatg 1099 Query: 252 cgtgcattggatgg 265 | ||||| ||||| Sbjct: 1100 agagcattagatgg 1113
>ref|XM_481802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3348 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 125 catgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacg 184 |||||||||| | |||||||| || || || || || ||||| |||||||||| || || Sbjct: 1956 catgtgcttcttcatggaccgcggcggcgagcgcatcgcctacatccagttcccgcagcg 2015 Query: 185 gttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgt 244 |||||||| || || || || || |||||||||||| ||||||| |||||||| |||| Sbjct: 2016 cttcgaggggatcgacccctccgaccgctacgccaacaacaacaccgtcttcttcgatgg 2075 Query: 245 caacatgcg 253 ||||||||| Sbjct: 2076 caacatgcg 2084
>tpg|BK000093.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like D3 gene, complete cds Length = 5547 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 125 catgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacg 184 |||||||||| | |||||||| || || || || || ||||| |||||||||| || || Sbjct: 2952 catgtgcttcttcatggaccgcggcggcgagcgcatcgcctacatccagttcccgcagcg 3011 Query: 185 gttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgt 244 |||||||| || || || || || |||||||||||| ||||||| |||||||| |||| Sbjct: 3012 cttcgaggggatcgacccctccgaccgctacgccaacaacaacaccgtcttcttcgatgg 3071 Query: 245 caacatgcg 253 ||||||||| Sbjct: 3072 caacatgcg 3080
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 125 catgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacg 184 |||||||||| | |||||||| || || || || || ||||| |||||||||| || || Sbjct: 15636743 catgtgcttcttcatggaccgcggcggcgagcgcatcgcctacatccagttcccgcagcg 15636684 Query: 185 gttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgt 244 |||||||| || || || || || |||||||||||| ||||||| |||||||| |||| Sbjct: 15636683 cttcgaggggatcgacccctccgaccgctacgccaacaacaacaccgtcttcttcgatgg 15636624 Query: 245 caacatgcg 253 ||||||||| Sbjct: 15636623 caacatgcg 15636615
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || ||||||||||| || || || || || ||||||||||||||||||| Sbjct: 21032 tccagttcccgcagcggttcgaggggatcgacccctccgaccgctacgccaaccacaaca 21091 Query: 229 ctgtcttctttgatgtcaacatgcg 253 | |||||||| || | ||||||||| Sbjct: 21092 ccgtcttcttcgacggcaacatgcg 21116
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E11 Length = 150200 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 125 catgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacg 184 |||||||||| | |||||||| || || || || || ||||| |||||||||| || || Sbjct: 70898 catgtgcttcttcatggaccgcggcggcgagcgcatcgcctacatccagttcccgcagcg 70839 Query: 185 gttcgagggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatgt 244 |||||||| || || || || || |||||||||||| ||||||| |||||||| |||| Sbjct: 70838 cttcgaggggatcgacccctccgaccgctacgccaacaacaacaccgtcttcttcgatgg 70779 Query: 245 caacatgcg 253 ||||||||| Sbjct: 70778 caacatgcg 70770
>dbj|AK072260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005B09, full insert sequence Length = 3633 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 169 tccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaaca 228 |||||||||| || ||||||||||| || || || || || ||||||||||||||||||| Sbjct: 1786 tccagttcccgcagcggttcgaggggatcgacccctccgaccgctacgccaaccacaaca 1845 Query: 229 ctgtcttctttgatgtcaacatgcg 253 | |||||||| || | ||||||||| Sbjct: 1846 ccgtcttcttcgacggcaacatgcg 1870
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 72 ctcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatgtgc 131 ||||| |||||||||||||| || | |||||||| ||||| || ||||| ||||| Sbjct: 62245 ctcaatctggactgtgatcactacatctacaactccaaagctatcaaagaaggaatgtgt 62304 Query: 132 ttcatgatggaccgtggtggtgaccgtattgcctatgtccagttcccccaacggttcgag 191 |||||||||||||| ||||||||| | || ||| | ||||| || ||||||||||| Sbjct: 62305 ttcatgatggaccgaggtggtgacaggatctgttatattcagtttccacaacggttcgaa 62364 Query: 192 ggcattgatccatcagatcgctacgccaaccacaacactgtcttctttgatg 243 || || || ||||||||||| || || || ||||| ||||||||||| |||| Sbjct: 62365 ggaatcgacccatcagatcgatatgcaaatcacaatactgtcttcttcgatg 62416
>gb|AF525360.1| Mesotaenium caldariorum cellulose synthase catalytic subunit (CesA1) gene, complete cds Length = 6176 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 171 cagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaacact 230 ||||||||||| || ||||| ||||| |||| || ||||||||||||||||||||||| Sbjct: 4058 cagttcccccagcgattcgacggcatcgatcgctccgatcgctacgccaaccacaacacc 4117 Query: 231 gtcttctt 238 |||||||| Sbjct: 4118 gtcttctt 4125 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 catgtgcttcatgatggacc 144 |||||||||||||||||||| Sbjct: 4009 catgtgcttcatgatggacc 4028
>gb|AY162184.1| Populus tremuloides cellulose synthase-like protein D4 (CSLD4) mRNA, partial cds Length = 3570 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 165 tatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccac 224 ||||| |||||||| || |||| |||||||| || || || ||||| || || || ||| Sbjct: 1860 tatgttcagttccctcagaggtttgagggcatagacccttctgatcgatatgctaatcac 1919 Query: 225 aacactgtcttctttgatgtcaacatgcgtgcattggatggtctcatgggaccagtctat 284 |||||||| || |||||||| ||||||||||| | |||||||| ||||| || |||||| Sbjct: 1920 aacactgtattttttgatgtgaacatgcgtgcccttgatggtctaatgggtcctgtctat 1979 Query: 285 gtcggcactgg 295 || || ||||| Sbjct: 1980 gttggaactgg 1990
>gb|BT017973.1| Zea mays clone EL01N0524D09.c mRNA sequence Length = 1387 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 541 tccaagggcgcccgcttgctgatcaccctggtgt 574 |||||||||||||||||||||||||||||||||| Sbjct: 12 tccaagggcgcccgcttgctgatcaccctggtgt 45
>emb|X87826.1|DIRNADC6 D.innoxia mRNA for unknown protein, (Cd-6) Length = 949 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 165 tatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccac 224 ||||| ||||| || ||||| || ||||| |||||||| || || || || || || ||| Sbjct: 581 tatgttcagtttcctcaacgttttgagggaattgatccttccgaccgttatgcaaatcac 640 Query: 225 aacactgtcttctttgatgtcaacatgcgtgc 256 || ||||| ||||||||||||||||||||||| Sbjct: 641 aatactgttttctttgatgtcaacatgcgtgc 672 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 450 gattttgatgatgaggagatgaa 472 ||||||||||||||||||||||| Sbjct: 863 gattttgatgatgaggagatgaa 885
>gb|AY633547.1| Ceratopteris richardii cellulose synthase-like protein (CslD1) gene, partial cds Length = 1018 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 ||||| ||||| ||||||||||| || ||| | || || |||||||||||||||||||| Sbjct: 935 aaggcgggtgccatgaatgctcttgttcgcgcgtcggcaatcatgtcaaatggacccttc 994 Query: 69 atactcaacctggactg 85 || || ||||| ||||| Sbjct: 995 atccttaacctcgactg 1011
>gb|AY633542.1| Mesotaenium caldariorum cellulose synthase catalytic subunit (CesA2) gene, complete cds Length = 6362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctt 238 ||||||||||||||||||||||| |||||||| Sbjct: 3632 gatcgctacgccaaccacaacaccgtcttctt 3663
>gb|AY483153.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA5) mRNA, partial cds Length = 2814 Score = 56.0 bits (28), Expect = 1e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 9 aaggcaggtgcaatgaatgctctagtccgctcatctgctgtcatgtcaaatggacccttc 68 |||||||| || ||||| ||||| ||||| |||||||| || |||||| |||| | Sbjct: 1003 aaggcaggggctatgaacgctctggtccgagtgtctgctgttctgacaaatgctccctac 1062 Query: 69 atactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggcatg 128 || || ||||| ||||||||||| |||||| ||||| ||||| | ||||||| ||| Sbjct: 1063 attcttaaccttgactgtgatcactatgttaacaacagcaaagctgtgcgtgaagcaatg 1122 Query: 129 tgcttcatgatggacc 144 |||||||||||||||| Sbjct: 1123 tgcttcatgatggacc 1138
>gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete sequence Length = 123357 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 44 tgctgtcatgtcaaatggacccttcatactcaacctggactgtgatcatta 94 |||||||||||| |||||||| ||| | ||||| || |||||||||||||| Sbjct: 122263 tgctgtcatgtccaatggaccattcgttctcaatcttgactgtgatcatta 122213
>ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose synthase AT1G02730 (ATCSLD5) mRNA, complete cds Length = 3837 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgatgt 244 |||||||||||||||||||||||||| Sbjct: 2306 aaccacaacactgtcttctttgatgt 2331
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete sequence Length = 100239 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgatgt 244 |||||||||||||||||||||||||| Sbjct: 96356 aaccacaacactgtcttctttgatgt 96381 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttga 241 ||||||||||||||||||||||| Sbjct: 98076 aaccacaacactgtcttctttga 98098
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete sequence Length = 121668 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgatgt 244 |||||||||||||||||||||||||| Sbjct: 21717 aaccacaacactgtcttctttgatgt 21742 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttga 241 ||||||||||||||||||||||| Sbjct: 23437 aaccacaacactgtcttctttga 23459
>ref|NM_123873.2| Arabidopsis thaliana TTR1; transcription factor AT5G45050 (TTR1) transcript variant AT5G45050.2 mRNA, complete cds Length = 4137 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 tgtcttctttgatgtcaacatgcgt 254 ||||||||||||||||||||||||| Sbjct: 2817 tgtcttctttgatgtcaacatgcgt 2841
>ref|NM_180802.1| Arabidopsis thaliana TTR1; transcription factor AT5G45050 (TTR1) transcript variant AT5G45050.1 mRNA, complete cds Length = 4221 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 tgtcttctttgatgtcaacatgcgt 254 ||||||||||||||||||||||||| Sbjct: 2901 tgtcttctttgatgtcaacatgcgt 2925
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0006L06.10), mRNA Length = 3408 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctttgatgtcaacatg 251 |||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 1624 gatcgctacgccaaccgcaacaccgtcttcttcgacatcaacatg 1668
>gb|AY633541.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA1) gene, partial cds Length = 4060 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 213 tacgccaaccacaacactgtcttctttga 241 ||||||||||||||||| ||||||||||| Sbjct: 1430 tacgccaaccacaacacagtcttctttga 1458
>gb|AY633540.1| Physcomitrella patens cellulose synthase (CesA2) pseudogene, partial sequence Length = 5304 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 169 tccagttcccccaacggttcgagggcattgatc 201 |||||||||||||||| ||||| |||||||||| Sbjct: 3652 tccagttcccccaacgattcgacggcattgatc 3684
>gb|AF304375.1|AF304375 Nicotiana alata cellulose synthase D-like protein (CslD1) mRNA, complete cds Length = 3621 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 66 ttcatactcaacctggactgtgatcattatgtttacaactctcaagctttccgtgaaggc 125 |||||||||||||| || |||||||| ||| | ||||||| |||| | |||||||| Sbjct: 2073 ttcatactcaaccttgattgtgatcactatatatacaactgcttagctgttcgtgaaggg 2132 Query: 126 atgtgcttcatgatgga 142 ||||| ||||||||||| Sbjct: 2133 atgtgtttcatgatgga 2149 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 522 tctataccgattgccgagttccaagggcgcccgcttgctgatcaccctg 570 ||||| || ||||| ||||||||||| ||||| | ||||||||||||| Sbjct: 2469 tctattccaattgctgagttccaaggccgccctatcgctgatcaccctg 2517
>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13 Length = 75709 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 230 tgtcttctttgatgtcaacatgcgt 254 ||||||||||||||||||||||||| Sbjct: 74902 tgtcttctttgatgtcaacatgcgt 74878
>emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T12C14 Length = 77720 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 219 aaccacaacactgtcttctttgatg 243 ||||||||||||||||||||||||| Sbjct: 71913 aaccacaacactgtcttctttgatg 71889
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full insert sequence Length = 3426 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctttgatgtcaacatg 251 |||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 1657 gatcgctacgccaaccgcaacaccgtcttcttcgacatcaacatg 1701
>ref|NM_102951.1| Arabidopsis thaliana ATCSLD6; cellulose synthase/ transferase, transferring glycosyl groups AT1G32180 (ATCSLD6) mRNA, complete cds Length = 2940 Score = 48.1 bits (24), Expect = 0.033 Identities = 129/164 (78%) Strand = Plus / Plus Query: 51 atgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctcaa 110 ||||| |||||||| ||||| | ||| |||||||||| || ||||| || ||||| | Sbjct: 1381 atgtctaatggaccgttcatcttgaacttggactgtgaccactatgtctataactcaaga 1440 Query: 111 gctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtc 170 ||||| | || || || || ||||||||||||| || || |||||| || ||||||| Sbjct: 1441 gcttttagagatgggatctgtttcatgatggaccatgacggcgaccgtgtttcctatgtt 1500 Query: 171 cagttcccccaacggttcgagggcattgatccatcagatcgcta 214 ||||| || || |||| || || ||||||||||| |||||||| Sbjct: 1501 cagtttccgcagaggtttgaaggaattgatccatctgatcgcta 1544
>gb|AY633545.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA5) gene, partial cds Length = 2345 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctt 238 ||||| |||||||||||||||||||| ||||| Sbjct: 730 gatcgttacgccaaccacaacactgtgttctt 761
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 207 gatcgctacgccaaccacaacactgtcttctt 238 |||||||||||||||| |||||| |||||||| Sbjct: 94090 gatcgctacgccaaccgcaacaccgtcttctt 94121
>gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BAC F3C3 genomic sequence, complete sequence Length = 90132 Score = 48.1 bits (24), Expect = 0.033 Identities = 129/164 (78%) Strand = Plus / Plus Query: 51 atgtcaaatggacccttcatactcaacctggactgtgatcattatgtttacaactctcaa 110 ||||| |||||||| ||||| | ||| |||||||||| || ||||| || ||||| | Sbjct: 38084 atgtctaatggaccgttcatcttgaacttggactgtgaccactatgtctataactcaaga 38143 Query: 111 gctttccgtgaaggcatgtgcttcatgatggaccgtggtggtgaccgtattgcctatgtc 170 ||||| | || || || || ||||||||||||| || || |||||| || ||||||| Sbjct: 38144 gcttttagagatgggatctgtttcatgatggaccatgacggcgaccgtgtttcctatgtt 38203 Query: 171 cagttcccccaacggttcgagggcattgatccatcagatcgcta 214 ||||| || || |||| || || ||||||||||| |||||||| Sbjct: 38204 cagtttccgcagaggtttgaaggaattgatccatctgatcgcta 38247
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I, complete sequence Length = 86436 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgat 242 |||||||||||||||||||||||| Sbjct: 46959 aaccacaacactgtcttctttgat 46982
>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5 Length = 88356 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgatgt 244 |||||||||| ||||||||||||||| Sbjct: 30895 aaccacaacattgtcttctttgatgt 30920
>gb|AY372245.1| Zea mays cellulose synthase catalytic subunit 11 (CesA11) mRNA, complete cds Length = 3231 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 84 tgtgatcattatgtttacaactctcaagctttccgtgaaggcatgtgcttcatgatggac 143 |||||||| |||||| ||||| ||||| | ||||||| |||||||||||||||||| Sbjct: 1425 tgtgatcactatgttaacaacagcaaagctgttcgtgaagcaatgtgcttcatgatggac 1484 Query: 144 c 144 | Sbjct: 1485 c 1485
>gb|AC140189.3| Mus musculus BAC clone RP24-370G18 from chromosome 1, complete sequence Length = 182590 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 actgtcttctttgatgtcaacatgc 252 ||||||||| ||||||||||||||| Sbjct: 133578 actgtcttcattgatgtcaacatgc 133554
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds Length = 3991 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 gaaggcatgtgcttcatgatggacc 144 |||| |||||||||||||||||||| Sbjct: 2213 gaagccatgtgcttcatgatggacc 2237
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project) Length = 33563 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 164 ctatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaacca 223 |||||| |||||||| ||| |||| || |||||||| || ||||| ||||||||| Sbjct: 22432 ctatgttcagttccctcaaaggtttgatggcattgacacaaacgatcgttacgccaacag 22373 Query: 224 caacactgtcttctttgatgt 244 ||||| |||||||||||||| Sbjct: 22372 aaacacagtcttctttgatgt 22352
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgatg 243 |||||||||| |||||||||||||| Sbjct: 33726 aaccacaacagtgtcttctttgatg 33750
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 tggctgctgcagctgttgctttcca 380 ||||||||||||||||| ||||||| Sbjct: 1100223 tggctgctgcagctgtttctttcca 1100247
>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence Length = 88068 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttctttgatg 243 |||||||||||| |||||||||||| Sbjct: 57244 aaccacaacactttcttctttgatg 57268
>gb|AC087320.16| Homo sapiens 12p BAC RP11-818E15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63090 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tcctcagctacatctgaagag 428 ||||||||||||||||||||| Sbjct: 7432 tcctcagctacatctgaagag 7412
>dbj|AK003709.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110014L14 product:unclassifiable, full insert sequence Length = 703 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 actgtcttctttgatgtcaacatgc 252 ||||||||| ||||||||||||||| Sbjct: 615 actgtcttcattgatgtcaacatgc 591
>ref|NM_007737.2| Mus musculus procollagen, type V, alpha 2 (Col5a2), mRNA Length = 6615 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 actgtcttctttgatgtcaacatgc 252 ||||||||| ||||||||||||||| Sbjct: 6527 actgtcttcattgatgtcaacatgc 6503
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 aaccacaacactgtcttcttt 239 ||||||||||||||||||||| Sbjct: 73009 aaccacaacactgtcttcttt 73029
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3) gene, complete cds Length = 7234 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 164 ctatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaacca 223 |||||| |||||||| ||| |||| || |||||||| || ||||| ||||||||| Sbjct: 2871 ctatgttcagttccctcaaaggtttgatggcattgacacaaacgatcgttacgccaacag 2930 Query: 224 caacactgtcttctttgatgt 244 ||||| |||||||||||||| Sbjct: 2931 aaacacagtcttctttgatgt 2951
>gb|AC137117.15| Mus musculus chromosome 15, clone RP23-242E20, complete sequence Length = 202147 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ttgatgatgaggagatgaac 473 |||||||||||||||||||| Sbjct: 128671 ttgatgatgaggagatgaac 128652
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase AT5G17420 (IRX3) mRNA, complete cds Length = 3693 Score = 40.1 bits (20), Expect = 7.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 164 ctatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaacca 223 |||||| |||||||| ||| |||| || |||||||| || ||||| ||||||||| Sbjct: 1701 ctatgttcagttccctcaaaggtttgatggcattgacacaaacgatcgttacgccaacag 1760 Query: 224 caacactgtcttctttgatgtcaa 247 ||||| |||||||||||| |||| Sbjct: 1761 aaacacagtcttctttgatatcaa 1784
>ref|NM_195879.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase D-like protein (OSJNBb0052C09.2), mRNA Length = 2493 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 168 gtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaac 227 ||||||||||| || |||||||| ||| | ||||| || |||||||||||||||||| Sbjct: 1204 gtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaac 1263
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 168 gtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaac 227 ||||||||||| || |||||||| ||| | ||||| || |||||||||||||||||| Sbjct: 19143 gtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaac 19084
>gb|AC124602.5| Mus musculus BAC clone RP23-37L7 from chromosome 7, complete sequence Length = 189065 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 41895 gctgctgcagctgttgcttt 41876
>gb|AC100817.5| Homo sapiens chromosome 8, clone RP11-936G2, complete sequence Length = 152388 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 145261 gctgctgcagctgttgcttt 145280
>ref|XM_994371.1| PREDICTED: Mus musculus SET domain containing 1A (Setd1a), mRNA Length = 5676 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 3971 gctgctgcagctgttgcttt 3952
>ref|XM_985966.1| PREDICTED: Mus musculus SET domain containing 1A (Setd1a), mRNA Length = 5862 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 4158 gctgctgcagctgttgcttt 4139
>ref|XM_894035.2| PREDICTED: Mus musculus SET domain containing 1A (Setd1a), mRNA Length = 5934 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 4230 gctgctgcagctgttgcttt 4211
>gb|BC066039.1| Mus musculus cDNA clone IMAGE:6410110, **** WARNING: chimeric clone **** Length = 5233 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 2461 gctgctgcagctgttgcttt 2442
>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete sequence Length = 182510 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cactgtttcctcagctacat 420 |||||||||||||||||||| Sbjct: 117453 cactgtttcctcagctacat 117472
>emb|AL121872.12|HSB348B13 Human DNA sequence from clone RP13-348B13 on chromosome X Contains a pseudogene similar to part of SRI (sorcin) and a novel gene, complete sequence Length = 142689 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 ctgctgcagctgttgctttccaaa 382 |||||||||||| ||||||||||| Sbjct: 140555 ctgctgcagctggtgctttccaaa 140578
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcagatcgctacgccaacca 223 |||||||||||||||||||| Sbjct: 2777306 tcagatcgctacgccaacca 2777287
>gb|AY143588.1| Styrax sieberi isolate Ssie6-79-8 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 643 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 512 ccacgctccacagagcacgg 493
>gb|AY143587.1| Styrax sieberi isolate Ssie6-79-7 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 644 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 513 ccacgctccacagagcacgg 494
>gb|AY143585.1| Styrax latifolius internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 639 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 508 ccacgctccacagagcacgg 489
>gb|AY143584.1| Styrax martii internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 639 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 508 ccacgctccacagagcacgg 489
>gb|AY143583.1| Styrax glabrus isolate Sgla6-100-3 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 641 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 508 ccacgctccacagagcacgg 489
>gb|AY143582.1| Styrax glabrus isolate Sgla6-100-2 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 641 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 508 ccacgctccacagagcacgg 489
>gb|AY143581.1| Styrax pohlii internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 639 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 508 ccacgctccacagagcacgg 489
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds Length = 3355 Score = 40.1 bits (20), Expect = 7.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 164 ctatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaacca 223 |||||| |||||||| ||| |||| || |||||||| || ||||| ||||||||| Sbjct: 1701 ctatgttcagttccctcaaaggtttgatggcattgacacaaacgatcgttacgccaacag 1760 Query: 224 caacactgtcttctttgatgtcaa 247 ||||| |||||||||||| |||| Sbjct: 1761 aaacacagtcttctttgatatcaa 1784
>gb|AC090615.9| Homo sapiens chromosome 17, clone RP11-578C11, complete sequence Length = 142895 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgctgtcatgtcaaatgga 62 |||||||||||||||||||| Sbjct: 71107 ctgctgtcatgtcaaatgga 71088
>gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, complete sequence Length = 189678 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 169204 gctgctgcagctgttgcttt 169185
>gb|BC049883.1| Mus musculus SET domain containing 1A, mRNA (cDNA clone MGC:55143 IMAGE:5387990), complete cds Length = 3333 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 1618 gctgctgcagctgttgcttt 1599
>gb|BC042890.1| Mus musculus SET domain containing 1A, mRNA (cDNA clone IMAGE:4952117), partial cds Length = 2068 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 318 gctgctgcagctgttgcttt 299
>gb|AF327508.1|AF327508 Styrax martii internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 640 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 509 ccacgctccacagagcacgg 490
>gb|AF327505.1|AF327505 Styrax portoricensis internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 641 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccacgctccacagagcacgg 355 |||||||||||||||||||| Sbjct: 510 ccacgctccacagagcacgg 491
>tpg|BK000091.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like F7 gene, complete cds Length = 11160 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 168 gtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaac 227 ||||||||||| || |||||||| ||| | ||||| || |||||||||||||||||| Sbjct: 7018 gtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaac 7077
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 acggtggctgctgcagctgttgct 375 |||| ||||||||||||||||||| Sbjct: 10514318 acggcggctgctgcagctgttgct 10514295
>gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y, complete sequence Length = 170282 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 ctgctgcagctgttgctttccaaa 382 |||||||||||| ||||||||||| Sbjct: 49716 ctgctgcagctggtgctttccaaa 49739
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 ccgcttgctgatcaccctgg 571 |||||||||||||||||||| Sbjct: 948667 ccgcttgctgatcaccctgg 948686
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds Length = 3081 Score = 40.1 bits (20), Expect = 7.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 164 ctatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaacca 223 |||||| |||||||| ||| |||| || |||||||| || ||||| ||||||||| Sbjct: 1656 ctatgttcagttccctcaaaggtttgatggcattgacacaaacgatcgttacgccaacag 1715 Query: 224 caacactgtcttctttgatgtcaa 247 ||||| |||||||||||| |||| Sbjct: 1716 aaacacagtcttctttgatatcaa 1739
>gb|AC026254.9| Homo sapiens chromosome 17, clone RP11-173M1, complete sequence Length = 154906 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ctgctgtcatgtcaaatgga 62 |||||||||||||||||||| Sbjct: 150644 ctgctgtcatgtcaaatgga 150663
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 cagattttgatgatgaggag 467 |||||||||||||||||||| Sbjct: 73629 cagattttgatgatgaggag 73610
>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08 Length = 133805 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 acggtggctgctgcagctgttgct 375 |||| ||||||||||||||||||| Sbjct: 81923 acggcggctgctgcagctgttgct 81900
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 acggtggctgctgcagctgttgct 375 |||| ||||||||||||||||||| Sbjct: 114697 acggcggctgctgcagctgttgct 114674
>dbj|AK110467.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-G08, full insert sequence Length = 2729 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 168 gtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaaccacaac 227 ||||||||||| || |||||||| ||| | ||||| || |||||||||||||||||| Sbjct: 1242 gtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaac 1301
>gb|AC149222.4| Mus musculus BAC clone RP23-325D10 from 7, complete sequence Length = 220651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gctgctgcagctgttgcttt 377 |||||||||||||||||||| Sbjct: 157709 gctgctgcagctgttgcttt 157728
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3) mRNA, complete cds Length = 3081 Score = 40.1 bits (20), Expect = 7.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 164 ctatgtccagttcccccaacggttcgagggcattgatccatcagatcgctacgccaacca 223 |||||| |||||||| ||| |||| || |||||||| || ||||| ||||||||| Sbjct: 1656 ctatgttcagttccctcaaaggtttgatggcattgacacaaacgatcgttacgccaacag 1715 Query: 224 caacactgtcttctttgatgtcaa 247 ||||| |||||||||||| |||| Sbjct: 1716 aaacacagtcttctttgatatcaa 1739 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,834,527 Number of Sequences: 3902068 Number of extensions: 4834527 Number of successful extensions: 86040 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 85517 Number of HSP's gapped (non-prelim): 512 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)