ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdg20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1080 bits (545), Expect = 0.0 Identities = 545/545 (100%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119467 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 119407 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119347 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119346 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119287 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119286 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119227 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119226 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119167 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119166 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 119107 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119106 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 119047 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119046 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 118987 Query: 549 acagc 553 ||||| Sbjct: 118986 acagc 118982 Score = 1080 bits (545), Expect = 0.0 Identities = 545/545 (100%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95368 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95427 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95428 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 95487 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95488 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95547 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95548 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95607 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95608 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 95667 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95668 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 95727 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95728 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 95787 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95788 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 95847 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95848 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 95907 Query: 549 acagc 553 ||||| Sbjct: 95908 acagc 95912
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118307 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 118248 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118247 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 118188 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118187 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 118128 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118127 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 118068 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118067 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 118008 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118007 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 117948 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117947 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 117888 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117887 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 117828 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117827 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 117768 Query: 549 acagc 553 ||||| Sbjct: 117767 acagc 117763
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119272 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119271 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119212 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119152 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119151 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119092 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119032 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118972 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 118912 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118911 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 118852 Query: 549 acagc 553 ||||| Sbjct: 118851 acagc 118847 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95884 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95944 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 96004 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96064 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96124 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96125 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96184 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96185 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 96244 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96245 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 96304 Query: 549 acagc 553 ||||| Sbjct: 96305 acagc 96309
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119272 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119271 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119212 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119152 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119151 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119092 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119032 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118972 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 118912 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118911 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 118852 Query: 549 acagc 553 ||||| Sbjct: 118851 acagc 118847 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95884 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95944 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 96004 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96064 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96124 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96125 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96184 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96185 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 96244 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96245 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 96304 Query: 549 acagc 553 ||||| Sbjct: 96305 acagc 96309
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119281 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119280 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119221 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119220 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119161 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119160 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119101 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119100 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119041 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119040 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 118981 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118980 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118921 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118920 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 118861 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118860 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 118801 Query: 549 acagc 553 ||||| Sbjct: 118800 acagc 118796 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95710 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95769 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95770 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95829 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95830 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95889 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95890 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95949 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95950 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96009 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96010 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96069 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96070 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96129 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96130 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 96189 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96190 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 96249 Query: 549 acagc 553 ||||| Sbjct: 96250 acagc 96254
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508343 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31508402 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508403 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 31508462 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508463 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 31508522 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508523 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 31508582 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508583 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 31508642 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508643 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 31508702 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508703 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 31508762 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508763 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 31508822 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508823 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 31508882 Query: 549 acagc 553 ||||| Sbjct: 31508883 acagc 31508887 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 451 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 511 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 11513215 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 467 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 526 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 527 taaaggaggtggggg 541 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatcaccagctaaggccc 507 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 423 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84253 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 84194 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84193 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 84134 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84133 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 84074 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84073 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 84014 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84013 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 83954 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83953 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 83894 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83893 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 83834 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83833 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 83774 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83773 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 83714 Query: 549 acagc 553 ||||| Sbjct: 83713 acagc 83709
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119360 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119301 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119300 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119241 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119240 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119181 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119180 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119121 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119120 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119061 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119060 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119001 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119000 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118941 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118940 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 118881 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118880 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 118821 Query: 549 acagc 553 ||||| Sbjct: 118820 acagc 118816 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95758 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95817 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95818 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95877 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95878 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95937 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95938 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95997 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95998 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96057 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96058 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96117 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96118 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96177 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96178 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 96237 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96238 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 96297 Query: 549 acagc 553 ||||| Sbjct: 96298 acagc 96302
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14532 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 14591 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14592 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 14651 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14652 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 14711 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14712 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 14771 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14772 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 14831 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14832 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 14891 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14892 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 14951 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14952 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 15011 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15012 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 15071 Query: 549 acagc 553 ||||| Sbjct: 15072 acagc 15076 Score = 1049 bits (529), Expect = 0.0 Identities = 542/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122807 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 122866 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122867 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 122926 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 122927 atagggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatg 122985 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122986 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 123045 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123046 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 123105 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123106 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 123165 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123166 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 123225 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123226 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 123285 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123286 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 123345 Query: 549 acagc 553 ||||| Sbjct: 123346 acagc 123350
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141399 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141400 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 141459 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141460 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 141519 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141520 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 141579 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141580 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 141639 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141640 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 141699 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141700 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 141759 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141760 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 141819 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141820 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 141879 Query: 549 acagc 553 ||||| Sbjct: 141880 acagc 141884
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93936 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 93995 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93996 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 94055 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94056 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 94115 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94116 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 94175 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94176 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 94235 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94236 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 94295 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94296 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 94355 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94356 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 94415 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94416 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 94475 Query: 549 acagc 553 ||||| Sbjct: 94476 acagc 94480
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58079 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 58020 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58019 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 57960 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57959 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 57900 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57899 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 57840 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57839 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 57780 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57779 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 57720 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57719 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 57660 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57659 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 57600 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57599 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 57540 Query: 549 acagc 553 ||||| Sbjct: 57539 acagc 57535
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28000 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 28059 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28060 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 28119 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28120 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 28179 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28180 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 28239 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28240 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 28299 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28300 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 28359 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28360 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 28419 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28420 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 28479 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28480 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 28539 Query: 549 acagc 553 ||||| Sbjct: 28540 acagc 28544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268692 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9268751 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268752 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9268811 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268812 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 9268871 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268872 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9268931 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268932 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9268991 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268992 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9269051 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269052 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9269111 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269112 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 9269171 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269172 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 9269231 Query: 549 acagc 553 ||||| Sbjct: 9269232 acagc 9269236 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056606 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9056665 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056666 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9056725 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056726 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 9056785 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056786 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9056845 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056846 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9056905 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056906 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9056965 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056966 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9057025 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057026 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 9057085 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057086 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 9057145 Query: 549 acagc 553 ||||| Sbjct: 9057146 acagc 9057150 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228192 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9228251 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228252 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9228311 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9228312 atagggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatg 9228371 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228372 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9228431 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228432 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9228491 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228492 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9228551 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228552 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9228611 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228612 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 9228671 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228672 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 9228731 Query: 549 acagc 553 ||||| Sbjct: 9228732 acagc 9228736 Score = 1049 bits (529), Expect = 0.0 Identities = 542/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164781 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9164840 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164841 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9164900 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 9164901 atagggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatg 9164959 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164960 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9165019 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165020 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9165079 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165080 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9165139 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165140 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9165199 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165200 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 9165259 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165260 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 9165319 Query: 549 acagc 553 ||||| Sbjct: 9165320 acagc 9165324
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938677 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19938736 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938737 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 19938796 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938797 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 19938856 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938857 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 19938916 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938917 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 19938976 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938977 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 19939036 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939037 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 19939096 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939097 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 19939156 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939157 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 19939216 Query: 549 acagc 553 ||||| Sbjct: 19939217 acagc 19939221 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10387603 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387604 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10387663 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387664 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10387723 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387724 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10387783 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387784 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10387843 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387844 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10387903 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387904 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10387963 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387964 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 10388023 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388024 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 10388083 Query: 549 acagc 553 ||||| Sbjct: 10388084 acagc 10388088 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276754 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10276695 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276694 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10276635 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276634 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10276575 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276574 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10276515 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276514 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10276455 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276454 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10276395 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276394 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10276335 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276334 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 10276275 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276274 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 10276215 Query: 549 acagc 553 ||||| Sbjct: 10276214 acagc 10276210 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 376 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 435 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 436 tcggccagtgagacgatgggggataagcttcatcgtcgagag 477 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598859 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31598918 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598919 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 31598978 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598979 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 31599038 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599039 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 31599098 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599099 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 31599158 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599159 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 31599218 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599219 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 31599278 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599279 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 31599338 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599339 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 31599398 Query: 549 acagc 553 ||||| Sbjct: 31599399 acagc 31599403 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 451 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 511 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 11509978 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 467 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 526 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 527 taaaggaggtggggg 541 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatcaccagctaaggccc 507 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 423 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526175 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 33526234 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526235 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 33526294 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526295 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 33526354 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526355 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 33526414 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526415 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 33526474 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526475 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 33526534 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526535 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 33526594 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526595 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 33526654 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526655 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 33526714 Query: 549 acagc 553 ||||| Sbjct: 33526715 acagc 33526719 Score = 206 bits (104), Expect = 6e-50 Identities = 104/104 (100%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678029 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 16677970 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgta 112 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677969 taggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 460 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 519 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 520 tcagtgataaaggaggtgggggtgcaaagac 550 ||||||||||||||||||||||||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac 527841 Score = 103 bits (52), Expect = 6e-19 Identities = 52/52 (100%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744714 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47366 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 47307 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47306 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 47247 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47246 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 47187 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47186 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 47127 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47126 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 47067 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47066 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 47007 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47006 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 46947 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46946 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 46887 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46886 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 46827 Query: 549 acagc 553 ||||| Sbjct: 46826 acagc 46822
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71372 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 71431 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71432 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 71491 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71492 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 71551 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71552 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 71611 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71612 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 71671 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71672 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 71731 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71732 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 71791 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71792 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 71851 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71852 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 71911 Query: 549 acagc 553 ||||| Sbjct: 71912 acagc 71916
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 203 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 263 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 323 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 383 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 443 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 503 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 563 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 623 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 683 Query: 549 acagc 553 ||||| Sbjct: 684 acagc 688
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 398 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 458 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 518 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 578 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 638 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 698 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 758 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 818 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 878 Query: 549 acagc 553 ||||| Sbjct: 879 acagc 883
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 269 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 329 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 389 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 449 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 509 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 569 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 629 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 689 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 749 Query: 549 acagc 553 ||||| Sbjct: 750 acagc 754
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 400 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 460 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 520 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 580 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 640 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 700 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 760 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 820 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 880 Query: 549 acagc 553 ||||| Sbjct: 881 acagc 885
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 219 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 279 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 339 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 399 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 459 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 519 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 579 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 639 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 699 Query: 549 acagc 553 ||||| Sbjct: 700 acagc 704
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 398 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 458 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 518 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 578 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 638 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 698 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 758 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 818 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 878 Query: 549 acagc 553 ||||| Sbjct: 879 acagc 883
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 400 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 460 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 520 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 580 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 640 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 700 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 760 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 820 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 880 Query: 549 acagc 553 ||||| Sbjct: 881 acagc 885
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949953 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19950012 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950013 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 19950072 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950073 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 19950132 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950133 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 19950192 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950193 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 19950252 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950253 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 19950312 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950313 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 19950372 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950373 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 19950432 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950433 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 19950492 Query: 549 acagc 553 ||||| Sbjct: 19950493 acagc 19950497 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393583 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10393642 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393643 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10393702 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393703 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10393762 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393763 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10393822 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393823 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10393882 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393883 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10393942 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393943 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10394002 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394003 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 10394062 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394063 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 10394122 Query: 549 acagc 553 ||||| Sbjct: 10394123 acagc 10394127 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282793 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10282734 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282733 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10282674 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282673 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10282614 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282613 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10282554 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282553 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10282494 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282493 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10282434 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282433 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10282374 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282373 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 10282314 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282313 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 10282254 Query: 549 acagc 553 ||||| Sbjct: 10282253 acagc 10282249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 376 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 435 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 436 tcggccagtgagacgatgggggataagcttcatcgtcgagag 477 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119334 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119275 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119274 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119215 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119214 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119155 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119154 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119095 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119094 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119035 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119034 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 118975 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118974 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118915 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118914 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 118855 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118854 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 118795 Query: 549 acagc 553 ||||| Sbjct: 118794 acagc 118790 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95764 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95824 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95884 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95944 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96004 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96064 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96124 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96125 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 96184 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96185 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 96244 Query: 549 acagc 553 ||||| Sbjct: 96245 acagc 96249
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20767 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 20826 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20827 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 20886 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20887 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 20946 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20947 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 21006 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21007 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 21066 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21067 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 21126 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21127 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 21186 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21187 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 21246 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21247 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 21306 Query: 549 acagc 553 ||||| Sbjct: 21307 acagc 21311 Score = 1027 bits (518), Expect = 0.0 Identities = 540/546 (98%), Gaps = 1/546 (0%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44351 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 44292 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| Sbjct: 44291 taggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttc 44232 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44231 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 44172 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44171 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 44112 Query: 249 gttgtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatg 307 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44111 gttgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatg 44052 Query: 308 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44051 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 43992 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43991 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 43932 Query: 428 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43931 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 43872 Query: 488 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43871 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 43812 Query: 548 gacagc 553 |||||| Sbjct: 43811 gacagc 43806
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 921 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 920 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 861 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 801 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 741 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 681 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 621 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 561 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 501 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 441 Query: 549 acagc 553 ||||| Sbjct: 440 acagc 436
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123190 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123131 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123130 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 123071 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123070 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 123011 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123010 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 122951 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122950 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 122891 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122890 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 122831 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122830 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 122771 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122770 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 122711 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122710 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 122651 Query: 549 acagc 553 ||||| Sbjct: 122650 acagc 122646 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99647 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99706 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99707 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 99766 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99767 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 99826 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99827 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 99886 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99887 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 99946 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99947 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 100006 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100007 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 100066 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100067 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 100126 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100127 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 100186 Query: 549 acagc 553 ||||| Sbjct: 100187 acagc 100191
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123907 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123848 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123847 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 123788 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123787 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 123728 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123727 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 123668 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123667 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 123608 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123607 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 123548 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123547 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 123488 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123487 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 123428 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123427 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 123368 Query: 549 acagc 553 ||||| Sbjct: 123367 acagc 123363 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100324 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 100383 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100384 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 100443 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100444 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 100503 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100504 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 100563 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100564 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 100623 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100624 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 100683 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100684 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 100743 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100744 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 100803 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100804 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 100863 Query: 549 acagc 553 ||||| Sbjct: 100864 acagc 100868
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1057 bits (533), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9241589 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 9241530 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241529 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9241470 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241469 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 9241410 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9241409 aagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatga 9241350 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241349 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9241290 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241289 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9241230 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241229 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9241170 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241169 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 9241110 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241109 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 9241050 Query: 549 acagc 553 ||||| Sbjct: 9241049 acagc 9241045 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 341 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 400 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 401 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 460 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 461 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 506 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 495 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 541 ||||||||| || ||||||||||||| ||| ||||| |||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtggggg 3580339 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 494 accagctaaggcccctaaatgaccgctcagtgataaagga 533 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1057 bits (533), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 52802 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 52743 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52742 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 52683 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52682 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 52623 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52622 aagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatga 52563 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52562 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 52503 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52502 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 52443 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52442 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 52383 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52382 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 52323 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52322 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 52263 Query: 549 acagc 553 ||||| Sbjct: 52262 acagc 52258
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1057 bits (533), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 397 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 457 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 517 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 aagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 577 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 637 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 697 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 757 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 817 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 818 ggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaag 877 Query: 549 acagc 553 ||||| Sbjct: 878 acagc 882
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1043 bits (526), Expect = 0.0 Identities = 532/534 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 510 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 570 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 630 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 690 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 750 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 810 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 870 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 871 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 930 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 542 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 931 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1041 bits (525), Expect = 0.0 Identities = 541/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123130 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123071 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123070 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 123011 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123010 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 122951 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122950 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 122891 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122890 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 122831 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122830 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 122772 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122771 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 122712 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122711 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 122652 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122651 ggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaag 122592 Query: 549 acagc 553 ||||| Sbjct: 122591 acagc 122587 Score = 1041 bits (525), Expect = 0.0 Identities = 541/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99607 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99666 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99667 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 99726 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99727 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 99786 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99787 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 99846 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99847 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 99906 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99907 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 99965 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99966 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 100025 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100026 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 100085 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100086 ggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaag 100145 Query: 549 acagc 553 ||||| Sbjct: 100146 acagc 100150
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1041 bits (525), Expect = 0.0 Identities = 541/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 6019 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6020 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 6079 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6080 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 6139 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6140 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 6199 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6200 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 6259 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 6260 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 6318 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6319 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 6378 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6379 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 6438 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6439 ggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaag 6498 Query: 549 acagc 553 ||||| Sbjct: 6499 acagc 6503
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1041 bits (525), Expect = 0.0 Identities = 541/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 607 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 608 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 667 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 727 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 787 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 847 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 848 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 906 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 966 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 1026 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1027 ggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaag 1086 Query: 549 acagc 553 ||||| Sbjct: 1087 acagc 1091
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 395 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 455 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 515 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 575 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 635 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 695 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 755 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 815 Query: 489 ggatcaccagctaaggcccctaaatgaccgctc 521 ||||||||||||||||||||||||||||||||| Sbjct: 816 ggatcaccagctaaggcccctaaatgaccgctc 848
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 993 bits (501), Expect = 0.0 Identities = 504/505 (99%) Strand = Plus / Plus Query: 49 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 109 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 168 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 169 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 229 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 289 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 349 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 409 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 469 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 529 aaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||| Sbjct: 482 aaggaggtgggggtgcaaagacagc 506
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 991 bits (500), Expect = 0.0 Identities = 503/504 (99%) Strand = Plus / Plus Query: 50 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 110 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 169 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 170 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 230 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 290 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 350 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 410 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 470 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 530 aggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||| Sbjct: 481 aggaggtgggggtgcaaagacagc 504
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 983 bits (496), Expect = 0.0 Identities = 535/547 (97%), Gaps = 2/547 (0%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122672 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactca 122613 Query: 69 taggcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 126 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122612 taggcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 122553 Query: 127 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 186 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122552 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 122493 Query: 187 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 246 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122492 tgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggat 122433 Query: 247 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122432 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 122373 Query: 307 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122372 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 122313 Query: 367 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 426 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 122312 gcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataatag 122253 Query: 427 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 486 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122252 gattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 122193 Query: 487 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 546 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122192 ctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaa 122133 Query: 547 agacagc 553 ||||||| Sbjct: 122132 agacagc 122126
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 983 bits (496), Expect = 0.0 Identities = 535/547 (97%), Gaps = 2/547 (0%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12825213 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactca 12825154 Query: 69 taggcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 126 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825153 taggcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 12825094 Query: 127 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 186 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825093 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 12825034 Query: 187 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 246 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825033 tgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggat 12824974 Query: 247 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824973 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 12824914 Query: 307 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824913 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 12824854 Query: 367 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 426 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 12824853 gcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataatag 12824794 Query: 427 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 486 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824793 gattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 12824734 Query: 487 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 546 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12824733 ctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaa 12824674 Query: 547 agacagc 553 ||||||| Sbjct: 12824673 agacagc 12824667
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 981 bits (495), Expect = 0.0 Identities = 498/499 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 603 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 663 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 723 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 783 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 843 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 903 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 963 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 1023 Query: 489 ggatcaccagctaaggccc 507 ||||||||||||||||||| Sbjct: 1024 ggatcaccagctaaggccc 1042
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 930 bits (469), Expect = 0.0 Identities = 526/545 (96%), Gaps = 5/545 (0%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141566 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141507 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141506 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 141452 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141451 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 141392 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 141391 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 141332 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141331 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 141272 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141271 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 141212 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141211 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggg 141152 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141151 gtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 141092 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 141091 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagag 141032 Query: 549 acagc 553 ||||| Sbjct: 141031 acagc 141027 Score = 930 bits (469), Expect = 0.0 Identities = 526/545 (96%), Gaps = 5/545 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112091 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 112150 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112151 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 112205 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112206 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 112265 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 112266 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 112325 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112326 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 112385 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112386 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 112445 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112446 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggg 112505 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112506 gtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 112565 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 112566 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagag 112625 Query: 549 acagc 553 ||||| Sbjct: 112626 acagc 112630
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 930 bits (469), Expect = 0.0 Identities = 527/545 (96%), Gaps = 6/545 (1%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133681 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 133622 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133621 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 133567 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133566 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 133507 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 133506 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 133447 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133446 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 133387 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 133386 gttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgc 133327 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 133326 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gg 133268 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133267 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 133208 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 133207 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagag 133148 Query: 549 acagc 553 ||||| Sbjct: 133147 acagc 133143 Score = 930 bits (469), Expect = 0.0 Identities = 527/545 (96%), Gaps = 6/545 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104290 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 104349 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104350 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 104404 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104405 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 104464 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104465 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 104524 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104525 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 104584 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 104585 gttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgc 104644 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 104645 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gg 104703 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104704 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 104763 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 104764 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagag 104823 Query: 549 acagc 553 ||||| Sbjct: 104824 acagc 104828
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130631 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130587 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104004 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104048
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1037 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1081
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138468 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138424 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110629 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110673
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131739 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131695 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105139 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105183
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135903 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135902 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135858 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107654 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107655 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107699
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 141844 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 141843 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagc 141799 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111425 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111484 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 111485 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagc 111529
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134511 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134510 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134466 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106525 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106526 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106570
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135557 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135556 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135512 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106868 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106869 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106913
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134646 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134645 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134601 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106697 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106698 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106742
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134644 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134643 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134599 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106694 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106695 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106739
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134556 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134555 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134511 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106572 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106573 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106617
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131732 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131688 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105137 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105181
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 904 bits (456), Expect = 0.0 Identities = 523/545 (95%), Gaps = 9/545 (1%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127322 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 127263 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 127262 taggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttc 127208 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127207 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 127148 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 127147 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 127088 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127087 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 127028 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 127027 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 126968 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 126967 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggg 126912 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126911 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 126852 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 126851 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagag 126792 Query: 549 acagc 553 ||||| Sbjct: 126791 acagc 126787 Score = 904 bits (456), Expect = 0.0 Identities = 523/545 (95%), Gaps = 9/545 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107600 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 107659 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 107660 taggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttc 107714 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107715 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 107774 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107775 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 107834 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107835 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 107894 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107895 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 107954 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 107955 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggg 108010 Query: 429 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108011 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 108070 Query: 489 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 548 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 108071 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagag 108130 Query: 549 acagc 553 ||||| Sbjct: 108131 acagc 108135
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 902 bits (455), Expect = 0.0 Identities = 506/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 91 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 150 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 151 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 210 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 211 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 271 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 331 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 391 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 450 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 451 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 511 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130753 aatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130711 Score = 902 bits (455), Expect = 0.0 Identities = 506/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 91 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 150 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 151 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 210 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 211 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 271 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 331 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 391 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 450 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 451 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 511 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102692 aatgaccgctcagtgataaaggaggtaggggtgcagagacagc 102734
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 900 bits (454), Expect = 0.0 Identities = 526/550 (95%), Gaps = 10/550 (1%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139044 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 138985 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 138984 taggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttc 138930 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138929 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 138870 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138869 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 138810 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138809 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 138750 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138749 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 138690 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataa 423 | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 138689 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataa 138630 Query: 424 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138629 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 138570 Query: 484 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtg 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138569 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtg 138510 Query: 544 caaagacagc 553 || ||||||| Sbjct: 138509 cagagacagc 138500 Score = 900 bits (454), Expect = 0.0 Identities = 526/550 (95%), Gaps = 10/550 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110901 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 110960 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 110961 taggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttc 111015 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111016 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 111075 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 111076 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 111135 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111136 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 111195 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 111196 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 111255 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataa 423 | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111256 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataa 111315 Query: 424 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111316 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 111375 Query: 484 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtg 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111376 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtg 111435 Query: 544 caaagacagc 553 || ||||||| Sbjct: 111436 cagagacagc 111445
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135265 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 135264 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 135220 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107365 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107366 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107410
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134865 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134821 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107041 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107085
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 2559 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 2560 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 2604
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135144 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135100 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107263 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107307
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135263 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 135262 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 135218 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107363 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107364 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107408
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134994 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 134993 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 134949 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107144 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107145 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107189
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138673 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138629 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110626 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110670
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1133 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 1177
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134523 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134522 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134478 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106539 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106540 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106584
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1035 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1079
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 131962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 131918 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104802 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104846
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 132923 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 132879 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 105726 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 105770
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 878 bits (443), Expect = 0.0 Identities = 503/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 130831 taaatgaccgctcagtgataaaggaggtaggggtgcagagaca 130789 Score = 878 bits (443), Expect = 0.0 Identities = 503/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 104563 taaatgaccgctcagtgataaaggaggtaggggtgcagagaca 104605
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 876 bits (442), Expect = 0.0 Identities = 506/526 (96%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 449 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 508 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1576
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1042 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1086
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 1044 taaatgaccgctcaatgataaaggaggtaggggtgcacagacagc 1088
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 866 bits (437), Expect = 0.0 Identities = 504/527 (95%), Gaps = 12/527 (2%) Strand = Plus / Minus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 327 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 386 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 387 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 446 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133958 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 133957 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 133911 Score = 866 bits (437), Expect = 0.0 Identities = 504/527 (95%), Gaps = 12/527 (2%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 327 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 386 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 387 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 446 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 106324 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106325 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106371
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 862 bits (435), Expect = 0.0 Identities = 507/527 (96%), Gaps = 8/527 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 209 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 268 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 327 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 386 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 387 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 446 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtga 2742 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcc 2802 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2803 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 2849
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 129450 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 103006
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 850 bits (429), Expect = 0.0 Identities = 435/437 (99%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 378 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 377 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 318 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 258 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 198 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 138 Query: 309 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 78 Query: 369 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 18 Query: 429 gtcaaggtcggccagtg 445 ||||||||||||||||| Sbjct: 17 gtcaaggtcggccagtg 1
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 841 bits (424), Expect = 0.0 Identities = 501/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1100
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 558
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 139331 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 139287 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110729 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110773
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 831 bits (419), Expect = 0.0 Identities = 498/525 (94%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 574
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 831 bits (419), Expect = 0.0 Identities = 473/491 (96%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 63 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 122 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 123 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 182 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 183 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 242 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 243 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 303 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 363 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 422 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 423 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 482 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 483 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 543 gcaaagacagc 553 ||||||||||| Sbjct: 1067 gcaaagacagc 1077
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 829 bits (418), Expect = 0.0 Identities = 501/526 (95%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 89 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 147 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 328 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 388 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 447 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 448 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 508 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagc 1100
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 829 bits (418), Expect = 0.0 Identities = 501/526 (95%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 389 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 447 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 448 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 508 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 177924 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 502 aggcccctaaatgaccgctcag 523 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 827 bits (417), Expect = 0.0 Identities = 499/525 (95%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1099
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 813 bits (410), Expect = 0.0 Identities = 498/526 (94%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 389 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 447 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 448 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 508 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggtaggggtgcagagacagc 1080
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 813 bits (410), Expect = 0.0 Identities = 496/525 (94%), Gaps = 11/525 (2%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggtaggggtgcaaagacagc 1094
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 809 bits (408), Expect = 0.0 Identities = 447/460 (97%) Strand = Plus / Plus Query: 94 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 153 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 154 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 213 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 214 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 274 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 334 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 393 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 394 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 453 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 454 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 514 gaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagc 1061
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 389 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 447 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 448 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 508 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 553 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 51604 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 389 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 447 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 448 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 508 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 553 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 38224
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 389 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 447 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 448 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 508 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 553 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 5152
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 787 bits (397), Expect = 0.0 Identities = 498/529 (94%), Gaps = 7/529 (1%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 621 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 386 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 444 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 445 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 504 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 505 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 1084
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 755 bits (381), Expect = 0.0 Identities = 494/529 (93%), Gaps = 7/529 (1%) Strand = Plus / Minus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 386 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 444 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 445 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 504 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 505 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 117065 Score = 755 bits (381), Expect = 0.0 Identities = 494/529 (93%), Gaps = 7/529 (1%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 386 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 444 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 445 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 504 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 505 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 91037
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 751 bits (379), Expect = 0.0 Identities = 494/529 (93%), Gaps = 10/529 (1%) Strand = Plus / Plus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 326 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 385 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 444 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 445 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 504 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 87293 Query: 505 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 87294 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagc 87342
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 747 bits (377), Expect = 0.0 Identities = 464/489 (94%), Gaps = 8/489 (1%) Strand = Plus / Plus Query: 69 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 127 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 128 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 185 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 186 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 245 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 246 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 305 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 365 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 424 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 425 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 484 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 485 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 544 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 545 aaagacagc 553 | ||||||| Sbjct: 1089 agagacagc 1097
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 449 cgatgggggataagctt 465 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 743 bits (375), Expect = 0.0 Identities = 511/552 (92%), Gaps = 12/552 (2%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 146016 cagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgactta 145957 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145956 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 145902 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145901 ctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 145842 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 145841 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 145782 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 145781 gttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgc 145722 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145721 gttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctg 145662 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaata 422 || |||||||||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 145661 cgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaaga 145602 Query: 423 acagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 481 ||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 145601 acaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagagggga 145542 Query: 482 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 541 ||||||| |||||||||||||||||||||||||||||||||||| | |||||||| || | Sbjct: 145541 acagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggag 145482 Query: 542 tgcaaagacagc 553 |||| ||||||| Sbjct: 145481 tgcagagacagc 145470 Score = 743 bits (375), Expect = 0.0 Identities = 511/552 (92%), Gaps = 12/552 (2%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 112446 cagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgactta 112505 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112506 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 112560 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112561 ctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 112620 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 112621 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 112680 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112681 gttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgc 112740 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112741 gttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctg 112800 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaata 422 || |||||||||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 112801 cgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaaga 112860 Query: 423 acagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 481 ||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 112861 acaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagagggga 112920 Query: 482 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 541 ||||||| |||||||||||||||||||||||||||||||||||| | |||||||| || | Sbjct: 112921 acagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggag 112980 Query: 542 tgcaaagacagc 553 |||| ||||||| Sbjct: 112981 tgcagagacagc 112992
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 743 bits (375), Expect = 0.0 Identities = 506/547 (92%), Gaps = 7/547 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 543 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 602 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||| |||||| |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 603 taggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaagcgagtcttc 657 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctggggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccaggatg 717 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 ||||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 718 aagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 777 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 837 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 838 gttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctg 897 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 427 || |||||||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 898 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacggg 957 Query: 428 gg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 486 || | | |||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 958 ggataagggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacagc 1017 Query: 487 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 546 || |||||||||||||||||||||||||||||||||||| |||||||||| || |||||| Sbjct: 1018 ccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaa 1077 Query: 547 agacagc 553 ||||||| Sbjct: 1078 agacagc 1084
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 89 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 147 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 328 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 387 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 388 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 447 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 448 acgatgggggataagcttcatcgtcgagagg 478 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 473 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 532 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 533 aggtgggggtgcaaagacagc 553 |||| |||||||| ||||||| Sbjct: 129287 aggtaggggtgcagagacagc 129267 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 726 bits (366), Expect = 0.0 Identities = 491/529 (92%), Gaps = 9/529 (1%) Strand = Plus / Plus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 326 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 385 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 444 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 445 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 504 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 89380 Query: 505 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 89381 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagc 89429
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 718 bits (362), Expect = 0.0 Identities = 501/546 (91%), Gaps = 6/546 (1%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 127898 cagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactca 127839 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127838 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 127784 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 127783 ctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccaggatg 127724 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 127723 aagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 127664 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127663 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 127604 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| Sbjct: 127603 gttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctg 127544 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 427 || ||||||||||||||||||||||||||||||||||| |||||||| || ||| || Sbjct: 127543 cgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggg 127484 Query: 428 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 487 | | |||| ||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 127483 gaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcc 127424 Query: 488 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 547 | ||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||| Sbjct: 127423 cagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaa 127364 Query: 548 gacagc 553 |||||| Sbjct: 127363 gacagc 127358 Score = 718 bits (362), Expect = 0.0 Identities = 501/546 (91%), Gaps = 6/546 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 95549 cagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactca 95608 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95609 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 95663 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 ctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccaggatg 95723 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 95724 aagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 95783 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95784 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 95843 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| Sbjct: 95844 gttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctg 95903 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 427 || ||||||||||||||||||||||||||||||||||| |||||||| || ||| || Sbjct: 95904 cgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggg 95963 Query: 428 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 487 | | |||| ||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 95964 gaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcc 96023 Query: 488 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 547 | ||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||| Sbjct: 96024 cagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaa 96083 Query: 548 gacagc 553 |||||| Sbjct: 96084 gacagc 96089
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 704 bits (355), Expect = 0.0 Identities = 501/547 (91%), Gaps = 7/547 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 547 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 606 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 607 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcaagtcttc 661 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ctggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 721 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 722 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 781 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 841 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 842 gttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctg 901 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag- 426 || |||||||||||||||||||||||||||||||||| |||| ||| | ||||| || Sbjct: 902 cgagagcggtaccaaatcgaggcaaactctgaatactggataggactccctaataataga 961 Query: 427 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 486 | || | |||| |||||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 962 gagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacagc 1021 Query: 487 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 546 || ||||||| ||||||||||||||||||||||| |||| |||||||||| || |||||| Sbjct: 1022 ccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaa 1081 Query: 547 agacagc 553 ||||||| Sbjct: 1082 agacagc 1088
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 389 gcaaactctgaatactagatat 410 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 196 bits (99), Expect = 5e-47 Identities = 114/119 (95%) Strand = Plus / Plus Query: 435 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 495 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 5300
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 389 gcaaactctgaatactagatat 410 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 196 bits (99), Expect = 5e-47 Identities = 114/119 (95%) Strand = Plus / Minus Query: 435 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 495 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 22625
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 389 gcaaactctgaatactagatatgaccc 415 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 427 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 486 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 546 aagacagc 553 ||||||| Sbjct: 5565 gagacagc 5572
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 389 gcaaactctgaatactagatatgaccc 415 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 427 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 486 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 546 aagacagc 553 ||||||| Sbjct: 5565 gagacagc 5572
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115650 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 115590 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 386 gaggcaaactctgaatactag 406 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86470 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 86530 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 386 gaggcaaactctgaatactag 406 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 4449 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 4508 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4509 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 4563 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 326 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 385 cgaggcaaactctgaatactagatatg 411 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 326 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 385 cgaggcaaactctgaatactagatatg 411 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 150686 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 150627 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 150626 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 150572 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 326 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 385 cgaggcaaactctgaatactagatatg 411 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117980 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 118039 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 118040 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 118094 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 326 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 385 cgaggcaaactctgaatactagatatg 411 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Minus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 26 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 86 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 145 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 146 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 206 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 265 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 266 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 326 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 385 cgaggcaaactctgaatactagatatg 411 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 597 bits (301), Expect = e-167 Identities = 472/525 (89%), Gaps = 8/525 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||||||||||| ||| ||||||||||| |||||||| ||||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggtaggggtgcatagaca 1084
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 597 bits (301), Expect = e-167 Identities = 488/548 (89%), Gaps = 8/548 (1%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138725 cagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 138666 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138665 taggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 138611 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138610 ccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatg 138551 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||| ||| | | ||||||||||||||||||||||||| ||||||||||||| Sbjct: 138550 aagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatga 138491 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138490 gtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgc 138431 Query: 309 gttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||| ||||||| || | || | |||||||||||||| |||||||||||| Sbjct: 138430 gttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctg 138371 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-- 425 || |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| Sbjct: 138370 cgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacg 138311 Query: 426 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 485 |||| ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 138310 agggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacag 138251 Query: 486 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||| |||||||||||||||||||| ||||||||||||||| | |||||||| || ||||| Sbjct: 138250 cccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgca 138191 Query: 546 aagacagc 553 |||||||| Sbjct: 138190 aagacagc 138183 Score = 597 bits (301), Expect = e-167 Identities = 488/548 (89%), Gaps = 8/548 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 83152 cagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 83211 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 83212 taggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 83266 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 83267 ccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatg 83326 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||||| ||| | | ||||||||||||||||||||||||| ||||||||||||| Sbjct: 83327 aagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatga 83386 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83387 gtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgc 83446 Query: 309 gttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||| ||||||| || | || | |||||||||||||| |||||||||||| Sbjct: 83447 gttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctg 83506 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-- 425 || |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| Sbjct: 83507 cgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacg 83566 Query: 426 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 485 |||| ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 83567 agggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacag 83626 Query: 486 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||| |||||||||||||||||||| ||||||||||||||| | |||||||| || ||||| Sbjct: 83627 cccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgca 83686 Query: 546 aagacagc 553 |||||||| Sbjct: 83687 aagacagc 83694
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 593 bits (299), Expect = e-166 Identities = 378/402 (94%), Gaps = 3/402 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 526 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 585 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| Sbjct: 586 taggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaagcgagtcttc 643 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 ccagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 703 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 704 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 763 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 823 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 824 gttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccg 883 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagata 409 || |||||||||||||||||||||||||||||||||| |||| Sbjct: 884 cgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 163 bits (82), Expect = 8e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagc 1068
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 377 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgg 363 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 14 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75153 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75094 Query: 74 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 133 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 75093 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 75034 Query: 134 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75033 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 74974 Query: 194 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74973 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 74914 Query: 254 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74913 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Plus Query: 14 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382385 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 382444 Query: 74 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 133 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 382445 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 382504 Query: 134 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382505 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 382564 Query: 194 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382565 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 382624 Query: 254 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382625 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 14 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113244 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 113185 Query: 74 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 133 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 113184 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 113125 Query: 134 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113124 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 113065 Query: 194 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113064 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 113005 Query: 254 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113004 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 14 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367926 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 367867 Query: 74 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 133 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 367866 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 367807 Query: 134 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367806 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 367747 Query: 194 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367746 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 367687 Query: 254 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 311 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367686 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 14 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184531 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 184472 Query: 74 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 133 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 184471 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 184412 Query: 134 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184411 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 184352 Query: 194 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184351 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184292 Query: 254 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 311 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184291 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtcgagagggaaacagcccggatc 493 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 533 bits (269), Expect = e-148 Identities = 371/401 (92%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144462 cagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttg 144521 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||| ||||| ||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 144522 taggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttg 144579 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 | |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 144580 ctggggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatg 144639 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 144640 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 144699 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144700 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 144759 Query: 309 gttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||| Sbjct: 144760 gttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctg 144819 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagat 408 || |||||||||||||||||||||||||||||||||||||| Sbjct: 144820 cgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 533 bits (269), Expect = e-148 Identities = 371/401 (92%), Gaps = 3/401 (0%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88389 cagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttg 88330 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||| ||||| ||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 88329 taggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttg 88272 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 | |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 88271 ctggggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatg 88212 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 88211 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 88152 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88151 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 88092 Query: 309 gttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||| Sbjct: 88091 gttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctg 88032 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactagat 408 || |||||||||||||||||||||||||||||||||||||| Sbjct: 88031 cgagagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 145012 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 87839
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 525 bits (265), Expect = e-146 Identities = 373/405 (92%), Gaps = 8/405 (1%) Strand = Plus / Minus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| | Sbjct: 6005 cagtgggaggagaatggaatctctgaccgcgtgccttttgaagaatgagccggcgactta 5946 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 |||||||||||||||||||||| || |||||||||||||||||| |||||||||| Sbjct: 5945 taggcagtggcttggttaagggcac-----ccaccggagccgtagcgagagcgagtcttc 5891 Query: 129 atagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgaccaggat 187 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5890 atagggcaattgtcactgctttatggacccgaacctgggtgatctatccatgaccaggat 5831 Query: 188 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 247 |||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||| Sbjct: 5830 gaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatg 5772 Query: 248 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5771 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 5712 Query: 308 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 366 ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| Sbjct: 5711 cgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggcc 5652 Query: 367 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 411 | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5651 gtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 143 bits (72), Expect = 7e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-134 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 314 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 488 bits (246), Expect = e-134 Identities = 363/399 (90%), Gaps = 6/399 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| | Sbjct: 542 cagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 601 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||| | ||| || |||||||||||||||||||||||| Sbjct: 602 taggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtcttt 656 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| || Sbjct: 657 ctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtg 716 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 717 aagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 776 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 777 gctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 836 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 837 gttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctg 896 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactag 406 || ||||||||||||||||||||||||||||||||||| Sbjct: 897 cgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 488 bits (246), Expect = e-134 Identities = 363/399 (90%), Gaps = 6/399 (1%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| | Sbjct: 555 cagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 614 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||| ||||||||| | ||| || |||||||||||||||||||||||| Sbjct: 615 taggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtcttt 669 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| || Sbjct: 670 ctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtg 729 Query: 189 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 248 |||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 730 aagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 789 Query: 249 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 308 | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 790 gctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 849 Query: 309 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 367 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 850 gttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctg 909 Query: 368 cgcgagcggtaccaaatcgaggcaaactctgaatactag 406 || ||||||||||||||||||||||||||||||||||| Sbjct: 910 cgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 484 bits (244), Expect = e-133 Identities = 364/400 (91%), Gaps = 8/400 (2%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| | Sbjct: 659 cagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 718 Query: 69 taggcagtggcttggttaagggaacg-gaacccaccggagccgtagcgaaagcgagtctt 127 ||||||||||| ||||||||| || ||| || |||||||||||||||||||||||| Sbjct: 719 taggcagtggcctggttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctt 772 Query: 128 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 187 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| | Sbjct: 773 tctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggt 832 Query: 188 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 247 ||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 833 gaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 892 Query: 248 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 307 || ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 893 agctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 952 Query: 308 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 366 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 953 cgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggct 1012 Query: 367 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 406 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1013 gcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 434 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 493 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 494 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 484 bits (244), Expect = e-133 Identities = 341/372 (91%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 182 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 241 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 242 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 301 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 302 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 361 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 362 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 421 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 422 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 481 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 482 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 541 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 542 tgcaaagacagc 553 |||||||||||| Sbjct: 2752 tgcaaagacagc 2741 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 149 tatggacccgaacct 163 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 331 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 332 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 391 aaactctgaatactagatatg 411 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 1065
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 331 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 332 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 391 aaactctgaatactagatatg 411 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 4099
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 386 gaggcaaactctgaatactag 406 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 1067
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 389 gcaaactctgaatactagatatgac 413 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 438 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 497 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 498 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagc 1115
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 331 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 332 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 391 aaactctgaatactagatatg 411 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 1065
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 386 gaggcaaactctgaatactag 406 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 386 gaggcaaactctgaatactag 406 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 124198 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 95668
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 386 gaggcaaactctgaatact 404 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 502 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 386 gaggcaaactctgaatact 404 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 502 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 386 gaggcaaactctgaatact 404 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 502 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagaca 1081
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 447/519 (86%), Gaps = 9/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 25 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 84 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 557 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 616 Query: 85 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 144 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 617 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 671 Query: 145 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 204 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 672 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 731 Query: 205 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 264 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 732 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 791 Query: 265 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 324 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 792 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 851 Query: 325 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 382 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 852 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 911 Query: 383 atcgaggcaaactctgaatactaga 407 ||||| ||||||||||||||||||| Sbjct: 912 atcgatgcaaactctgaatactaga 936 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 1063
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Minus Query: 25 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 84 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 115105 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 115046 Query: 85 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 144 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 115045 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 114991 Query: 145 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 204 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114990 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 114931 Query: 205 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 264 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 114930 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 114871 Query: 265 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 324 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 114870 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 114811 Query: 325 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 382 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 114810 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 114751 Query: 383 atcgaggcaaactctgaatactaga 407 ||||| ||||||||||||||||||| Sbjct: 114750 atcgatgcaaactctgaatactaga 114726 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 25 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 84 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 86883 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 86942 Query: 85 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 144 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 86943 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 86997 Query: 145 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 204 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86998 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 87057 Query: 205 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 264 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 87058 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 87117 Query: 265 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 324 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 87118 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 87177 Query: 325 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 382 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87178 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 87237 Query: 383 atcgaggcaaactctgaatactaga 407 ||||| ||||||||||||||||||| Sbjct: 87238 atcgatgcaaactctgaatactaga 87262 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 114599 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 87389
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 386 gaggcaaactctgaatactagata 409 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 502 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1076
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 87 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 88 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 147 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 311 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 373 bits (188), Expect = e-100 Identities = 209/216 (96%) Strand = Plus / Plus Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 389 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 448 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 449 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 509 taaatgaccgctcagtgataaaggaggtgggggtgc 544 ||||||| |||||||||||||||||||| ||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc 532
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 418 bits (211), Expect = e-114 Identities = 445/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 389 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 446 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 447 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 506 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 507 cctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 145 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 204 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 205 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 264 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 265 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 324 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 325 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 385 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 442 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 443 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 502 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 503 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 89 gg 90 || Sbjct: 602 gg 603
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 386 gaggcaaactctgaatactagatatga 412 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 441 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 500 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 501 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1470
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 27 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 86 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 87 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 146 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 147 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 206 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 207 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 266 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 267 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 326 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 327 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 386 gaggcaaactctgaatactagatatg 411 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Plus Query: 441 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 500 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 501 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagaca 1022
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 90 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 91 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 148 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 327 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 328 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 385 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 386 gaggcaaactctgaatactag 406 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 329 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 389 gcaaactctgaatactagatatgac 413 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 416 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 475 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 476 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 535 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 536 t 536 | Sbjct: 1064 t 1064
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 353 bits (178), Expect = 4e-94 Identities = 181/182 (99%) Strand = Plus / Plus Query: 9 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 506 Query: 69 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 566 Query: 129 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 626 Query: 189 aa 190 || Sbjct: 627 aa 628
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 349 bits (176), Expect = 6e-93 Identities = 176/176 (100%) Strand = Plus / Minus Query: 378 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 438 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 498 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 344
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 330 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 331 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 389 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 390 caaactctgaatactagat 408 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 159 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 160 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 219 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 220 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 279 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 280 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 335 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 336 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 395 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 396 ctgaatactag 406 ||||||||| Sbjct: 932 aagaatactag 942 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 101 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 160 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 339 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 340 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 399 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 400 atactagatatga 412 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 157 bits (79), Expect = 5e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 553 ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagc 1029 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 90 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 148 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 329 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 387 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 388 ggcaaactctgaatacta 405 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 90 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 148 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 209 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 268 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 269 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 328 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 329 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 387 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 388 ggcaaactctgaatacta 405 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 499 ctaaggcccctaaat 513 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 499 ctaaggcccctaaat 513 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 37 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 96 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 97 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 155 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 156 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 215 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 216 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 275 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 276 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 334 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 335 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 394 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 395 tctgaatacta 405 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 512 atgaccgctcagtgataaaggaggtgg 538 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 8e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 94 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 153 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 154 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 213 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 214 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 272 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 8e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 90 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 147 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 325 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 326 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 385 cgaggcaaactctgaatactag 406 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 313 bits (158), Expect = 3e-82 Identities = 158/158 (100%) Strand = Plus / Plus Query: 396 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 456 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 516 ccgctcagtgataaaggaggtgggggtgcaaagacagc 553 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagc 158
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 210 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 269 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 270 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 329 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 330 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 389 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 390 caaactctgaatactagatat 410 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 137 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 196 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 197 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 256 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 257 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 316 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 317 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 373 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 374 cggtaccaaatcgaggcaaactctgaatactaga 407 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 500 taaggcccctaaatgaccgctcagtg 525 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 153 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 212 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 213 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 272 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 273 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 331 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 332 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 391 aaactctgaatactagatatgac 413 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 502 aggcccctaaatg 514 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 106 agccgtagcgaaagcgagtcttaatagggcgat 138 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 153 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 212 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 213 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 272 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 273 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 331 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 332 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 391 aaactctgaatactagatatgac 413 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 502 aggcccctaaatg 514 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 106 agccgtagcgaaagcgagtcttaatagggcgat 138 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 153 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 212 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 213 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 272 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 273 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 331 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 332 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 391 aaactctgaatactagatatgac 413 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 502 aggcccctaaatg 514 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 106 agccgtagcgaaagcgagtcttaatagggcgat 138 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 329 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 330 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 389 gcaaactctgaatacta 405 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 329 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 330 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 389 gcaaactctgaatacta 405 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 512 atgaccgctcagtgataaaggaggtg 537 ||| ||||| |||| |||||||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtg 192915 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 512 atgaccgctcagtgataaaggaggtg 537 ||| ||||| |||| |||||||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtg 143867
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 89 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 148 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 149 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 208 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 209 agaggtcc 216 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 103 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 162 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 163 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 222 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 223 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 282 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 283 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 342 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 343 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 402 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 403 ct 404 || Sbjct: 2489 ct 2490 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtggg 539 |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtggg 2604 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 140 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 199 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 200 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 259 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 260 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 319 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 320 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 376 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 377 taccaaatcgaggcaaactctgaatactaga 407 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063 Score = 89.7 bits (45), Expect = 9e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 87 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 159 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 160 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 219 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 220 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 279 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 280 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 338 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 399 aatactagata 409 ||||||||||| Sbjct: 921 aatactagata 931 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 159 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 160 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 219 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 220 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 279 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 280 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 338 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 399 aatactagata 409 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 161 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 162 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 221 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 222 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 281 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 282 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 340 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 341 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 400 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 401 tac 403 ||| Sbjct: 549 tac 551 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 539 |||||| ||| ||||| ||| |||||||||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtggg 666 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 39 gtgcctgttgaagaatgagccggcgactcatagg 72 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 106 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 165 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 166 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 225 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 226 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 285 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 286 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 342 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 343 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 402 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 403 ctaga 407 ||||| Sbjct: 935 ctaga 939 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 87 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 170 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 171 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 230 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 231 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 290 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 291 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 347 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 348 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 404 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 500 taaggcccctaaat 513 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 72 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 106 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 165 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 166 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 225 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 226 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 285 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 286 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 342 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 343 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 402 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 403 ctaga 407 ||||| Sbjct: 2817 ctaga 2821 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 29 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 87 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 115 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 174 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 175 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 234 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 235 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 294 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 295 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 353 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 354 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 115 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 174 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 175 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 234 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 235 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 294 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 295 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 353 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 354 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtggg 539 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtggg 189971 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtggg 539 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtggg 151398 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 38 cgtgcctgttgaagaatgagccggcgactcatag 71 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 38 cgtgcctgttgaagaatgagccggcgactcatag 71 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 329 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 330 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 388 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 389 gcaaactctgaatacta 405 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 512 atgaccgctcagtgataaaggaggtg 537 ||| ||||| |||| |||||||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtg 1084
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 39 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 98 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 99 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 158 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 159 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 218 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 219 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 278 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 279 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 336 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 337 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 396 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 397 tgaatacta 405 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 7e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 329 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 330 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 389 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 390 caaactctgaatacta 405 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 502 aggcccctaaat 513 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 442 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 501 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 502 aggcccctaaat 513 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 404 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 463 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 464 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 523 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 524 tgataaaggaggtgggggtgcaaaga 549 |||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaaga 19152975
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 404 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 463 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 464 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 523 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 524 tgataaaggaggtgggggtgcaaaga 549 |||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaaga 76370
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 327 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 328 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 385 cgaggcaaactctgaatact 404 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 327 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 328 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 384 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 385 cgaggcaaactctgaatact 404 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 4e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 91 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 92 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 151 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 152 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 211 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 212 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 271 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 272 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 317 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 339 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 397 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 398 gaatac 403 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 156 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 157 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 216 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 217 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 276 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 277 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 333 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 334 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 392 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 393 actctgaatactagata 409 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 474 agagggaaacagcccggatcaccagctaaggcccctaaatg 514 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 156 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 157 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 216 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 217 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 276 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 277 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 333 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 334 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 392 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 393 actctgaatactagata 409 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 474 agagggaaacagcccggatcaccagctaaggcccctaaatg 514 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 115 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 174 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 175 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 234 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 235 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 294 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 295 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 351 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 352 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagaca 678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 74 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 161 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 162 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 221 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 222 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 281 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 282 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 338 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 399 aatactag 406 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 161 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 162 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 221 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 222 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 281 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 282 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 338 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 399 aatactag 406 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 500 taaggcccctaaatg 514 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 500 taaggcccctaaatg 514 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 7e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 101 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 160 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 334 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 335 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 394 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 395 tctgaatact 404 | ||||||| Sbjct: 924 taagaatact 933 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 436 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 495 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 496 cagctaaggcccctaaatgaccgctcagtgataaagga 533 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 7e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 90 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 147 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 148 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 207 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 208 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 267 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 268 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 327 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 328 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 386 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 387 aggcaaactctgaatacta 405 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 500 taaggcccctaaat 513 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtggg 2137742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtggg 477118 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 115 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 174 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 175 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 234 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 235 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 294 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 295 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 351 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 352 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagaca 678 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 74 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 90 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 149 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 150 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 209 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 210 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 269 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 270 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 321 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 441 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 500 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 501 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagaca 2801
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 106 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 163 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 284 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 340 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 341 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 399 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 400 atactagatatg 411 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 500 taaggcccctaaatg 514 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 90 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 42 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 101 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 160 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 339 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 340 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 399 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 400 atacta 405 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 42 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 101 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 160 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 339 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 340 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 399 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 400 atacta 405 |||||| Sbjct: 19901 atacta 19906 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 156 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 157 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 216 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 217 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 276 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 277 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 333 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 334 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 392 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 393 actctgaatactagata 409 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 474 agagggaaacagcccggatcaccagctaaggcccctaaatg 514 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 37 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 96 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 97 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 156 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 157 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 216 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 217 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 276 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 277 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 336 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 337 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 395 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 396 ctgaatac 403 | |||||| Sbjct: 544 cagaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 539 |||||| ||||||||| ||| |||| ||||||||||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtggg 666
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 292 ggttctccccgaaatgcgttgaggcgcagc 321 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 127 bits (64), Expect = 4e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagaca 679 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 399 aatac 403 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcga 64 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 292 ggttctccccgaaatgcgttgaggcgcagc 321 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 537 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 399 aatac 403 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 160 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 338 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 339 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 397 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 398 gaatactagatatg 411 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 500 taaggcccctaaatg 514 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 80 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 72 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 72 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 72 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 210 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 269 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 270 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 329 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 330 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 386 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 387 aggcaaactctgaatactag 406 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 33 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 498 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 499 ctaaggcccctaaatga 515 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 139 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 194 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 160 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 338 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 339 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 397 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 398 gaatactagatatg 411 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 500 taaggcccctaaatg 514 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 80 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 101 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 160 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 161 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 220 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 221 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 280 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 281 cagagctagctggttctccccgaaatgcgttgaggcgcagc 321 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagaca 1056 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 334 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 393 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 394 ctctgaatactagata 409 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 7e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 158 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 159 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 218 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 219 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 278 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 279 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 335 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 336 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 394 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 395 tctgaatactagatatg 411 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 460 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 514 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 7e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 159 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 160 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 219 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 220 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 279 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 280 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 337 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 338 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 396 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 397 tgaatactagatat 410 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 89 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 474 agagggaaacagcccggatcaccagctaaggcccctaaatga 515 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 292 ggttctccccgaaatgcgttgaggcgcagcagttg 326 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagaca 681 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 399 aatac 403 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcga 64 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 161 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 162 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 221 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 222 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 281 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 282 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 339 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 340 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 399 aatac 403 ||||| Sbjct: 547 aatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagaca 678 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 74 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 102 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 161 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 162 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 221 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 222 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 281 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 282 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 339 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 340 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 399 aatactagat 408 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 474 agagggaaacagcccggatcaccagctaaggcccctaaatg 514 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtggg 1775439 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtggg 376630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | | || |||||||| ||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtggg 3292 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 292 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 348 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 349 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 440 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 499 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 500 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 545 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 671 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 512 atgaccgctcagtgataaaggaggtggg 539 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 353 tttcggtgcgggctgcgcgagcggtaccaaatcga 387 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 399 aatac 403 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 399 aatac 403 ||||| Sbjct: 1049320 aatac 1049316 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1659555 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1049189 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 284 agctagctggttctccccgaaatgcgttgaggcg 317 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 399 aatac 403 ||||| Sbjct: 1186 aatac 1190 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 112 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 171 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 172 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 231 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 232 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 291 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 292 ggttctccccgaaatgcgttgaggcg 317 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 399 aatac 403 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 339 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 398 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 399 aatac 403 ||||| Sbjct: 571559 aatac 571563 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 2657231 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 439 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 498 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 499 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 551 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 571690 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 154 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 213 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 214 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 273 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 274 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 333 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 334 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 392 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 393 actctgaatacta 405 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 452 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 511 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 512 atgaccgctcagtgataaaggaggtgggggtgc 544 || | ||| |||| ||||||||||||| |||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgc 1502 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 30 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 79 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 153 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 212 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 213 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 272 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 273 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 332 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 333 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 390 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 391 aaactctgaatactagatatg 411 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 31 ctgaccgcgtgcctgttgaagaatgagccggcgact 66 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 438 ggccagtgagacgatgggggataagcttcat 468 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 238 bits (120), Expect = 2e-59 Identities = 256/302 (84%) Strand = Plus / Plus Query: 104 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 163 |||||| ||| ||||||||| | ||||| ||||| |||||| ||| |||||||||| Sbjct: 2324 ggagccatagtgaaagcgagcttgaatagagcgatagtcactatttacagacccgaaccc 2383 Query: 164 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 223 || ||||||| ||||| |||||||||| ||| | | | |||||| |||||||||||||| Sbjct: 2384 ggatgatctagccatggccaggatgaaacttaggtaacactaagtggaggtccgaaccga 2443 Query: 224 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 283 ||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| ||||| | | Sbjct: 2444 ctgatgttgaaaaatcaacggatgagctgtggctagcggtgaaataccaatcgaattcgg 2503 Query: 284 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 343 |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct: 2504 agctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggt 2563 Query: 344 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 403 |||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||| Sbjct: 2564 aaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatac 2623 Query: 404 ta 405 || Sbjct: 2624 ta 2625 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 441 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 500 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 501 aaggcccctaaat 513 ||||||||||||| Sbjct: 2700 aaggcccctaaat 2712 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 32 tgaccgcgtgcctgttgaagaatgagccggcgact 66 ||||| ||||||||||||||||||||||||||||| Sbjct: 2256 tgacctcgtgcctgttgaagaatgagccggcgact 2290 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,323,042 Number of Sequences: 3902068 Number of extensions: 3323042 Number of successful extensions: 66838 Number of sequences better than 10.0: 2709 Number of HSP's better than 10.0 without gapping: 2726 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 52345 Number of HSP's gapped (non-prelim): 13967 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
