ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdg19 |
|---|---|
| Clone Library Name | barley_pub |
>YPFP_BACSU (P54166) Putative glycosyl transferase ypfP (EC 2.-.-.-)| Length = 382 Score = 71.6 bits (174), Expect = 2e-12 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 6/149 (4%) Frame = +2 Query: 50 QLVVICGRNKTLSSSLQALEWKM--PIKIRGFETQMEKWMGACDCIITKAGPGTIAEALI 223 Q+VV+CG+N L SL ALE + +K+ G+ ++++ DC+ITK G T+ EA Sbjct: 232 QVVVVCGKNTALKESLSALEAENGDKLKVLGYVERIDELFRITDCMITKPGGITLTEATA 291 Query: 224 RGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKSPKETAELVAHWFGPGSEDRKRMSENA- 400 G+P+IL +PGQE N + D GA + +E E V + RM +N Sbjct: 292 IGVPVILYKPVPGQEKENANFFEDRGAAIVVNRHEEILESVTSLLA-DEDTLHRMKKNIK 350 Query: 401 -LKLAQPEAVF--DIVRDIHELSQEQGVK 478 L LA V DI+++ ++ +Q K Sbjct: 351 DLHLANSSEVILEDILKESEMMTAKQKAK 379
>MURG_COXBU (Q820X3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 358 Score = 47.4 bits (111), Expect = 3e-05 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Frame = +2 Query: 113 KMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVP 283 K+ K+ F + M G D ++ +AG T+ E G+ I + + + N Sbjct: 234 KIEAKVDNFISDMAGAYGWADLVVCRAGALTVCEIASVGVASIFIPYPHAVDNHQFHNAR 293 Query: 284 YVVDNGAGVFSKSPKETAELVAHWFGPGSEDRKR---MSENALKLAQPEAVFDIV 439 ++ GA + T + WF ++DR R M+ENA KLA+PEAV ++ Sbjct: 294 FLEQAGAAIIISEESLTETDLMRWFEQFAQDRDRLLTMAENARKLAKPEAVQRVI 348
>MURG_BACTN (Q8A258) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 372 Score = 46.6 bits (109), Expect = 5e-05 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 8/122 (6%) Frame = +2 Query: 128 IRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVG------NVPYV 289 + F M A D +I++AG G+I+E + P++L +P V N + Sbjct: 253 VTDFIKDMAAAYAASDLVISRAGAGSISEFCLLHKPVVL---VPSPNVAEDHQTKNALAL 309 Query: 290 VDNGAGVFSKSPKETAELVAHWFGPGSEDR--KRMSENALKLAQPEAVFDIVRDIHELSQ 463 VD A ++ K + A+L+ ++DR K +SEN KLA P++ I +++ +L++ Sbjct: 310 VDKQAAIYVKDSEAEAKLMDVALNTVADDRKLKELSENIAKLALPDSARIIAQEVIKLAE 369 Query: 464 EQ 469 + Sbjct: 370 AE 371
>MURG_BURS3 (Q39JX0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 367 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVV 292 +++ F M A D +I ++G T++E G+ + F + + N ++ Sbjct: 243 VRLVPFIDDMAAAYAAADLVICRSGAMTVSEIAAVGVAALFVPFPYAVDDHQTSNAAFLA 302 Query: 293 DNGAGVFSKSPKETAELVAHWF-GPGSEDRKRMSENALKLAQPEAVFDIVR 442 D GA V + +AEL+A W G M+E + LA+PEA ++ R Sbjct: 303 DAGAAVLVQQRDLSAELLADWLRGQSRASLADMAERSRSLAKPEATDEVAR 353
>MURG_HAEDU (Q7U336) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 45.4 bits (106), Expect = 1e-04 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 8/122 (6%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPY 286 + + F M + D +I ++G T+ E GLP I F+P Q+ N Y Sbjct: 237 VSVTEFIDDMAEAYNWADLVICRSGALTVCEIAAAGLPAI---FVPYQHKDRQQYLNATY 293 Query: 287 VVDNGAGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKL---AQPEAVFDIVRDIHEL 457 + + GA + + P TAE + + P +DR++++E A+K A P+A + I E+ Sbjct: 294 LANVGAAIIVEQPDFTAENLLNILQPLIKDRQKLTEMAIKAHTKATPKAAQRVAEVIIEV 353 Query: 458 SQ 463 S+ Sbjct: 354 SK 355
>MURG_THIDA (Q3SMH3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 366 Score = 45.1 bits (105), Expect = 2e-04 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVD 295 ++R + M CD I +AG T+AE G+P +L F + + GN ++ + Sbjct: 250 EVRDYIDDMAAAYRDCDFAICRAGAMTVAELACAGVPALLVPFPFAVDDHQTGNAAFLAE 309 Query: 296 NGAGVFSKSPKETAELVAHWFGPGSEDR-KRMSENALKLAQPEA 424 GA + +AE +A +R MSE A++LA+P+A Sbjct: 310 AGAAWLVQQKDLSAEALAELIAGIDRNRLAAMSEQAVRLAKPDA 353
>MURG_BURPS (Q63QJ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 367 Score = 42.7 bits (99), Expect = 8e-04 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETAEL 343 D +I ++G T+AE G+ + F + + N ++ + GA V + +AEL Sbjct: 260 DLVICRSGAMTVAEIAAVGVAALFVPFPHAVDDHQTTNAEFLAEQGAAVLVQQRDLSAEL 319 Query: 344 VAHWF-GPGSEDRKRMSENALKLAQPEAVFDIVR 442 +A W G + M+E + LA+P+A ++ R Sbjct: 320 LADWLRGQSRDSLAAMAERSRSLAKPDATDEVAR 353
>MURG_BURP1 (Q3JND8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 367 Score = 42.7 bits (99), Expect = 8e-04 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETAEL 343 D +I ++G T+AE G+ + F + + N ++ + GA V + +AEL Sbjct: 260 DLVICRSGAMTVAEIAAVGVAALFVPFPHAVDDHQTTNAEFLAEQGAAVLVQQRDLSAEL 319 Query: 344 VAHWF-GPGSEDRKRMSENALKLAQPEAVFDIVR 442 +A W G + M+E + LA+P+A ++ R Sbjct: 320 LADWLRGQSRDSLAAMAERSRSLAKPDATDEVAR 353
>MURG_BURMA (Q62GS7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 367 Score = 42.7 bits (99), Expect = 8e-04 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETAEL 343 D +I ++G T+AE G+ + F + + N ++ + GA V + +AEL Sbjct: 260 DLVICRSGAMTVAEIAAVGVAALFVPFPHAVDDHQTTNAEFLAEQGAAVLVQQRDLSAEL 319 Query: 344 VAHWF-GPGSEDRKRMSENALKLAQPEAVFDIVR 442 +A W G + M+E + LA+P+A ++ R Sbjct: 320 LADWLRGQSRDSLAAMAERSRSLAKPDATDEVAR 353
>MURG_BACFR (Q64ZM1) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 380 Score = 40.4 bits (93), Expect = 0.004 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%) Frame = +2 Query: 128 IRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVG------NVPYV 289 + F M A D +I++AG G+I+E + P+IL +P V N + Sbjct: 262 VTDFIKDMAAAYAAADLVISRAGAGSISEFCLLNKPVIL---VPSPNVAEDHQTKNALAL 318 Query: 290 VDNGAGVFSKSPKETAEL--VAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQ 463 V+ A ++ K + +L VA +E +SEN LA P++ I +++ +L+Q Sbjct: 319 VNKQAAIYVKDAEAENKLLPVALETIANAEKLSELSENIAHLALPDSAVVIAKEVIKLAQ 378 Query: 464 E 466 + Sbjct: 379 Q 379
>MURG_BACFN (Q5LIJ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 380 Score = 40.4 bits (93), Expect = 0.004 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%) Frame = +2 Query: 128 IRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVG------NVPYV 289 + F M A D +I++AG G+I+E + P+IL +P V N + Sbjct: 262 VTDFIKDMAAAYAAADLVISRAGAGSISEFCLLNKPVIL---VPSPNVAEDHQTKNALAL 318 Query: 290 VDNGAGVFSKSPKETAEL--VAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQ 463 V+ A ++ K + +L VA +E +SEN LA P++ I +++ +L+Q Sbjct: 319 VNKQAAIYVKDAEAENKLLPVALETIANAEKLSELSENIAHLALPDSAVVIAKEVIKLAQ 378 Query: 464 E 466 + Sbjct: 379 Q 379
>MURG_NEIG1 (Q5F6L8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 40.0 bits (92), Expect = 0.005 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 6/129 (4%) Frame = +2 Query: 68 GRNKTLSSSLQALEWKMPIKIRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPII 241 GRNK +LQA + +K E T M D +I +AG TIAE GL + Sbjct: 220 GRNKL--GNLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGAL 277 Query: 242 LNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETAELVAHWFGPGSEDR-KRMSENALKL 409 L + + + N ++V AG+ + TAE +A G + ++ + +ENA L Sbjct: 278 LVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENARTL 337 Query: 410 AQPEAVFDI 436 A P + D+ Sbjct: 338 ALPHSADDV 346
>MURG_NITEU (Q82VS3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 357 Score = 39.3 bits (90), Expect = 0.009 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Frame = +2 Query: 170 CDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETAE 340 CD +I +AG TI+E G+ IL + + + N ++ D A V + TA Sbjct: 251 CDLVICRAGALTISELAAAGVASILIPYPYAVDDHQTANARFLSDYQAAVLWPQSELTAA 310 Query: 341 LVAHWFGPGSEDR-KRMSENALKLAQPEAVFDIVRDIHELS 460 +A W S + + M+ +A LA PEA + +LS Sbjct: 311 SLAQWLMTCSRAQLQSMATHARALAMPEAAQTVAEACQQLS 351
>MURG_DESPS (Q6AJ53) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 369 Score = 38.5 bits (88), Expect = 0.015 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%) Frame = +2 Query: 128 IRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDN 298 + F M+ D ++++AG T+AE G P+IL + + N Y V Sbjct: 248 VEPFFKDMDAVYSQADILVSRAGATTLAELATLGKPVILVPYPFAADNHQQKNAEYYVQG 307 Query: 299 GAGVFSKSPKETAELVAH---WFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHEL 457 G + K + TA + E R+RM N +LA +A IV +L Sbjct: 308 GGALLFKESELTAPQLVEAVISIATNREQRERMEFNQRRLAPTDAAGKIVAVCRQL 363
>MURG_NEIMB (Q9K0Y2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 38.5 bits (88), Expect = 0.015 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Frame = +2 Query: 137 FETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAG 307 F T M D +I +AG TIAE GL +L + + + N ++V AG Sbjct: 243 FITDMVSAYRDADLVICRAGALTIAELTAAGLGALLVPYPHAVDDHQTANARFMVQAEAG 302 Query: 308 VFSKSPKETAELVAHWFGPGSEDR-KRMSENALKLAQPEAVFDI 436 + + TAE +A G + ++ + +ENA LA P + D+ Sbjct: 303 LLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDV 346
>MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 38.5 bits (88), Expect = 0.015 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Frame = +2 Query: 137 FETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAG 307 F T M D +I +AG TIAE GL +L + + + N ++V AG Sbjct: 243 FITDMVSAYRDADLVICRAGALTIAELTAAGLGALLVPYPHAVDDHQTANARFMVQAEAG 302 Query: 308 VFSKSPKETAELVAHWFGPGSEDR-KRMSENALKLAQPEAVFDI 436 + + TAE +A G + ++ + +ENA LA P + D+ Sbjct: 303 LLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDV 346
>MURG_PROAC (Q6A9Q2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 372 Score = 38.1 bits (87), Expect = 0.019 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 22/106 (20%) Frame = +2 Query: 59 VICGRNKTLSSSLQALEWKMPIKIRG-----------------FETQMEKWMGACDCIIT 187 V+ R + L+ +Q L P IRG + M A D ++ Sbjct: 210 VVAARTRLLADGVQILHVLGPKNIRGATRITDELTGASWLPMGYVDDMASAYAAADLMVA 269 Query: 188 KAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGV 310 ++G GT+ E GLP I ++P G++ N VD GAGV Sbjct: 270 RSGAGTVVETATVGLPTI---YVPLPHGNGEQARNATSAVDAGAGV 312
>MURG_FRATT (Q5NGM4) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 371 Score = 37.7 bits (86), Expect = 0.025 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 9/101 (8%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLPII---LNDFIPGQEVGNVPYVVDNGAGVFSKSPKETAEL 343 D +I +AG T++E I GLP I L + + N +V+N AG + + T E Sbjct: 267 DLVICRAGALTVSECAIAGLPAIFIPLPSAVDDHQFFNAQNIVNNNAGFCLRQQQMTLEN 326 Query: 344 VAHWFGPGSEDR------KRMSENALKLAQPEAVFDIVRDI 448 + P ++DR +M++ L E + D V+ I Sbjct: 327 LLAIIKPLNQDRSKLEQMSKMAKKTLIKNSSEQILDCVKKI 367
>MURG_METCA (Q604V7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 354 Score = 37.0 bits (84), Expect = 0.043 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVD 295 K+ F ME+ G D I +AG T++E GLP IL F I + N Y+ + Sbjct: 235 KVDPFIEDMEEAYGWADLAICRAGAMTVSELAAAGLPAILVPFPYAIDDHQTANADYLAE 294 Query: 296 NGAGV 310 GA V Sbjct: 295 AGAAV 299
>MURG_DECAR (Q47AA4) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 352 Score = 36.6 bits (83), Expect = 0.056 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 3/100 (3%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETAEL 343 D +I +AG TIAE G+ IL F + + GN ++V G + T + Sbjct: 253 DLVICRAGALTIAELAAAGVASILVPFPHAVDDHQTGNAKFLVHAGGAFLLPQTELTPDA 312 Query: 344 VAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQ 463 +A M+E A LA+P+A + + E+++ Sbjct: 313 IALIRNYSRSQLLEMAEKARSLAKPDATEAVAQICSEIAK 352
>MURG_AZOSE (Q5P6Z6) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 357 Score = 35.8 bits (81), Expect = 0.096 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Frame = +2 Query: 137 FETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVDNGAG 307 F M D ++ +AG T+AE G +L F + + GN ++ D GA Sbjct: 240 FIDDMASRYAEADLVVCRAGALTVAELAAVGAASLLVPFPHAVDDHQTGNAQFLADRGAA 299 Query: 308 VFSKSPKETAELVAHWFGPGSEDR-KRMSENALKLAQPEAVFDIVRDIHELS 460 P+ AE +A + D M+ A LA+P A + + EL+ Sbjct: 300 YLLPQPQLDAERLAGIIESLARDHLLDMATKARALAKPRAAEAVAQVCEELA 351
>CPB2_CAEJA (Q6E3F0) Cytoplasmic polyadenylation element-binding protein 2| Length = 594 Score = 35.4 bits (80), Expect = 0.13 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -1 Query: 280 DVADFLSRYEVIKDDRKTPNQGFSNG-AWSSLCYNAITSPHPLFHLGLESPNLYWHFPFK 104 D+ F SRY ++ D + + G S + SLC IT P PL HL + SP PF Sbjct: 272 DILGFFSRYGRLQVDWPSKHYGGSKSDSDPSLCSEIITPPAPLSHLSMASPPFGQINPFM 331 Query: 103 S 101 S Sbjct: 332 S 332
>MURG_PSEAE (Q9HW01) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 357 Score = 35.0 bits (79), Expect = 0.16 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVDNGAG-VFSKSPKETAE 340 D +I +AG T++E GLP + L I + N ++V +GAG + + AE Sbjct: 254 DLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAE 313 Query: 341 LVAHWFG--PGSEDRKRMSENALKLAQPEAVFDIV 439 L A E + M++ A LA+PEA +V Sbjct: 314 LAAQLSEVLMHPETLRSMADQARSLAKPEATRTVV 348
>MURG_LACLA (Q9CF92) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 357 Score = 35.0 bits (79), Expect = 0.16 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 12/121 (9%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPG------QEVGNVP 283 + IR + M + + + ++G TIAE GLP + ++P Q+ N Sbjct: 238 LDIRPYINNMTELLAKSQLFLGRSGSTTIAEVTALGLPAV---YVPSPNVTADQQTKNAQ 294 Query: 284 YVVDNGAGVFSKSPKETAELVAHWFG---PGSEDRKRMSENALKLAQPEA---VFDIVRD 445 VD GA + K T + + +E + M +LK P+A ++++V++ Sbjct: 295 EYVDQGAAIIIKDEDLTGQTLVEAISNILENNEKYQEMQAASLKAGVPDASQRLYNLVKE 354 Query: 446 I 448 I Sbjct: 355 I 355
>MURG_BACSU (P37585) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 35.0 bits (79), Expect = 0.16 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Frame = +2 Query: 137 FETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPG-------QEVGNVPYVVD 295 F QM +++ A D I+ +AG TIAE G+P +L IP QEV N + Sbjct: 249 FLHQMPEYLKAIDVIVARAGAATIAEITALGIPSVL---IPSPYVTANHQEV-NARSLGQ 304 Query: 296 NGAGVFSKSPKETAELVAHWFGP---GSEDRKRMSENALKLAQPEAVFDIVRDIHELSQ 463 + A + K + + E + + K MSE L P+A + + EL + Sbjct: 305 HDAAIVLKETELSGEKLIEALDRIVLNEQTLKEMSERTKSLGVPDAAARLYSVLEELKK 363
>MURG_PSEPF (Q3K744) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 356 Score = 34.7 bits (78), Expect = 0.21 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVD 295 +++ F M + G D ++ +AG TI+E GLP + L I + N Y+ Sbjct: 237 QVQPFIKDMAQAYGWADLVVCRAGALTISELAAAGLPSMLVPLPHAIDDHQTRNADYLAR 296 Query: 296 NGAG-VFSKSPKETAELVAHWFGPGSEDRK--RMSENALKLAQPEAVFDIV 439 GA + + A+L A + ++ +M++ A +LA+PEA +V Sbjct: 297 EGAAFLMPQRTTGAADLAARLTEVLMQPQRLEQMAQAARRLAKPEATRSVV 347
>MURG_BLOPB (Q493Q1) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 34.7 bits (78), Expect = 0.21 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Frame = +2 Query: 173 DCIITKAGPGTIAEALIRGLPIILNDFI---PGQEVGNVPYVVDNGAGVFSKSPKETAEL 343 D +I++AG T++E I GLP I FI Q+ N +V GA + T+++ Sbjct: 254 DILISRAGALTVSEVSIVGLPAIFVPFIHHKDRQQYWNAVPLVQAGAAKIIEQKNFTSDV 313 Query: 344 VAHWFGPGSEDRK---RMSENALKLAQPEAVFDIVRDIHE 454 V+ S DRK M++ A +A P A + + I E Sbjct: 314 VSAML--ESWDRKTLCSMAQRARSIAAPNATQQVSQVIIE 351
>MURG_XANC5 (Q3BXF2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 431 Score = 34.7 bits (78), Expect = 0.21 Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 6/153 (3%) Frame = +2 Query: 32 LGKPIGQLVVICGRNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIA 211 LG P +L CG + L+ + + F M D ++ +AG T+A Sbjct: 222 LGHPEVELRHQCGEKLRAEAEAAYLQAGVNASVEPFIADMAAAYAWADLVVCRAGASTLA 281 Query: 212 EALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETA---ELVAHWFGPGSE 373 E G+ +L F + + N Y+V A V K A + V Sbjct: 282 ELCAAGVGSVLVPFAAAVDDHQTRNAEYLVGADAAVLLKQDDSLAVRLQQVLQTLLADPT 341 Query: 374 DRKRMSENALKLAQPEAVFDIVRDIHELSQEQG 472 R M+ A LA+P+A + + DI + QE G Sbjct: 342 RRLSMANAARTLAKPDAA-ERIADI--ILQEAG 371
>MURG_MYCPA (Q73YQ8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 408 Score = 34.7 bits (78), Expect = 0.21 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 8/101 (7%) Frame = +2 Query: 146 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGV 310 +M+ A D +I ++G T+AE GLP I ++P G++ N VVD G G+ Sbjct: 285 RMDLAYAAADLVICRSGAMTVAEVSAVGLPAI---YVPLPIGNGEQRLNALPVVDAGGGM 341 Query: 311 FSKSPKETAELVAHWFGPGSEDRKR---MSENALKLAQPEA 424 T ELVA D R M+ A ++ P+A Sbjct: 342 VVADADLTPELVAREVAGLVGDPPRLAAMTTAAARVGHPDA 382
>MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 410 Score = 34.3 bits (77), Expect = 0.28 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Frame = +2 Query: 146 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGV 310 +ME A D +I +AG T+AE GLP I ++P G++ N VV+ G G+ Sbjct: 292 RMELAYAAADLVICRAGAMTVAEVSAVGLPAI---YVPLPIGNGEQRLNALPVVNAGGGM 348 Query: 311 FSKSPKETAELVA 349 T ELVA Sbjct: 349 VVADAALTPELVA 361
>MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 410 Score = 34.3 bits (77), Expect = 0.28 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Frame = +2 Query: 146 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGV 310 +ME A D +I +AG T+AE GLP I ++P G++ N VV+ G G+ Sbjct: 292 RMELAYAAADLVICRAGAMTVAEVSAVGLPAI---YVPLPIGNGEQRLNALPVVNAGGGM 348 Query: 311 FSKSPKETAELVA 349 T ELVA Sbjct: 349 VVADAALTPELVA 361
>MURG_LISIN (Q929Y2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 34.3 bits (77), Expect = 0.28 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Frame = +2 Query: 50 QLVVICG--RNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALI 223 QL+ + G + + SL + I ++ F M K + A ++++AG T+AE Sbjct: 218 QLLYVTGDVHFEKIKDSLGEMNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTA 277 Query: 224 RGLPIILNDFIPG-------QEVGNVPYVVDNGAGVFSKSPKETAELVAHWFGPGSEDRK 382 G+P IL IP QE +N A V ++S + +L+A +++ K Sbjct: 278 LGVPSIL---IPSPYVTANHQEYNARALEKNNAAVVITESELKETDLMATVDAILTDEAK 334 Query: 383 --RMSENALKLAQPEAVFDIVRDI 448 M +A ++ +P+A +V + Sbjct: 335 LNSMKLSAKQMGRPDAALKLVETV 358
>MURG_PSEF5 (Q4K6J3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 356 Score = 33.9 bits (76), Expect = 0.37 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 6/111 (5%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVD 295 +++ F M + G D ++ +AG T++E GLP + L I + N Y+ Sbjct: 237 QVQPFIKDMAQAYGWADLVVCRAGALTVSELAAAGLPSMLVPLPHAIDDHQTRNAEYLAR 296 Query: 296 NGAG-VFSKSPKETAELVAHWFGPGSEDRK--RMSENALKLAQPEAVFDIV 439 GA + + A+L A + + M++ A +LA+P A D+V Sbjct: 297 EGAAFLMPQRTTGAADLAARLTEVLMQPERLDNMAQAARRLAKPGATHDVV 347
>MURG_CHRVO (Q7NPZ9) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 360 Score = 33.5 bits (75), Expect = 0.48 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +2 Query: 83 LSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 244 + ++ QA + +++ F M K + CD +I +AG T++E G+P +L Sbjct: 229 VEAAYQAAGLRQQVELLPFVDDMPKRLAECDLVICRAGAITVSELCAAGVPSVL 282
>MURG_THEFY (Q47QW9) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 379 Score = 33.5 bits (75), Expect = 0.48 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 8/119 (6%) Frame = +2 Query: 116 MPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNV 280 +P + + +ME A D + ++G T AE GLP + F+P G++ N Sbjct: 239 VPYVVVPYVDEMELAYAAADIAMCRSGALTCAELTAVGLPAV---FVPLAIGNGEQRLNA 295 Query: 281 PYVVDNGAGVFSKSPKETAELVAHWFGPGSEDRKR---MSENALKLAQPEAVFDIVRDI 448 +V G G+ + + + + + P D R MSE A +L + +A + R++ Sbjct: 296 EPIVQAGGGLMVANSELSRDWIREHLIPLLTDTDRIVAMSEAAARLGRRDADMALAREV 354
>MURG_LISMO (Q8Y5M2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 33.5 bits (75), Expect = 0.48 Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 8/141 (5%) Frame = +2 Query: 50 QLVVICG--RNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALI 223 QL+ + G + + SL L I ++ F M K + A ++++AG T+AE Sbjct: 218 QLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTA 277 Query: 224 RGLPIIL--NDFIPGQEVGNVPYVVD--NGAGVFSKSPKETAELVAHWFGPGSEDRK--R 385 G+P IL + ++ N ++ N A V +++ + +L+A +++ K Sbjct: 278 LGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNS 337 Query: 386 MSENALKLAQPEAVFDIVRDI 448 M +A ++ +P+A +V + Sbjct: 338 MKLSAKQMGRPDAAAKLVEAV 358
>MURG_XANOR (Q5GW41) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 441 Score = 33.1 bits (74), Expect = 0.62 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 6/153 (3%) Frame = +2 Query: 32 LGKPIGQLVVICGRNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIA 211 LG P ++ CG + + + + + F M D ++ +AG T+A Sbjct: 221 LGHPDVEVRHQCGEKLRAEAEVAYAQASVNASVEPFIADMAAAYAWADLVVCRAGASTLA 280 Query: 212 EALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETA---ELVAHWFGPGSE 373 E G+ +L F + + N Y+V A V K A + V Sbjct: 281 ELCAAGVGSVLVPFAAAVDDHQTRNAEYLVGADAAVLLKQDDSLAVRLQQVLQTLLTDPA 340 Query: 374 DRKRMSENALKLAQPEAVFDIVRDIHELSQEQG 472 R M+ A LA+P+A + + DI + QE G Sbjct: 341 RRLSMANAARTLAKPDAA-ERIADI--ILQEAG 370
>MURG_LISMF (Q71XX8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 33.1 bits (74), Expect = 0.62 Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 8/141 (5%) Frame = +2 Query: 50 QLVVICG--RNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALI 223 QL+ + G + + SL L I ++ F M K + A ++++AG T+AE Sbjct: 218 QLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTA 277 Query: 224 RGLPIIL--NDFIPGQEVGNVPYVVD--NGAGVFSKSPKETAELVAHWFGPGSEDRK--R 385 G+P IL + ++ N ++ N A V +++ + +L+A +++ K Sbjct: 278 LGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNG 337 Query: 386 MSENALKLAQPEAVFDIVRDI 448 M +A ++ +P+A +V + Sbjct: 338 MKLSAKQMGRPDAAAKLVEAV 358
>MURG_XANCP (Q8PCK0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 427 Score = 32.7 bits (73), Expect = 0.81 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 6/153 (3%) Frame = +2 Query: 32 LGKPIGQLVVICGRNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIA 211 LG P + CG + + + + F M D ++ +AG T+A Sbjct: 222 LGHPAVDVRHQCGEKLRAEAEAAYAQAAVNASVEPFIADMAAAYAWADLVVCRAGASTLA 281 Query: 212 EALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETA---ELVAHWFGPGSE 373 E G+ +L F + + N Y+V A V K A + V Sbjct: 282 EVCAAGVGSVLVPFAAAVDDHQTRNAEYLVSAEAAVLLKQDDTLAVRLQQVLQTLLADPA 341 Query: 374 DRKRMSENALKLAQPEAVFDIVRDIHELSQEQG 472 R M++ A LA+P+A + + DI + QE G Sbjct: 342 RRLAMAQAARTLAKPDAA-ERIADI--ILQEAG 371
>MURG_XANC8 (Q4UQX0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 427 Score = 32.7 bits (73), Expect = 0.81 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 6/153 (3%) Frame = +2 Query: 32 LGKPIGQLVVICGRNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIA 211 LG P + CG + + + + F M D ++ +AG T+A Sbjct: 222 LGHPAVDVRHQCGEKLRAEAEAAYAQAAVNASVEPFIADMAAAYAWADLVVCRAGASTLA 281 Query: 212 EALIRGLPIILNDF---IPGQEVGNVPYVVDNGAGVFSKSPKETA---ELVAHWFGPGSE 373 E G+ +L F + + N Y+V A V K A + V Sbjct: 282 EVCAAGVGSVLVPFAAAVDDHQTRNAEYLVSAEAAVLLKQDDTLAVRLQQVLQTLLADPA 341 Query: 374 DRKRMSENALKLAQPEAVFDIVRDIHELSQEQG 472 R M++ A LA+P+A + + DI + QE G Sbjct: 342 RRLAMAQAARTLAKPDAA-ERIADI--ILQEAG 371
>MURG_PSEU2 (Q4ZNZ0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 356 Score = 32.7 bits (73), Expect = 0.81 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVD 295 ++ F M + G D ++ +AG TI+E GLP I L I + N Y+ Sbjct: 237 QVAPFIQNMAQAYGWADLVVCRAGALTISELAAAGLPSLLIPLPHAIDDHQSRNADYLAR 296 Query: 296 NGAG-VFSKSPKETAELVAHW--FGPGSEDRKRMSENALKLAQPEAVFDIV 439 GA V ++ AE+ A E M+ A LA+P+A +V Sbjct: 297 EGAAFVMPQATTGAAEMAARLKEVLMQPEQLNSMARTARSLAKPDATRTVV 347
>MURG_CORJK (Q4JW95) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 370 Score = 32.7 bits (73), Expect = 0.81 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Frame = +2 Query: 146 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGV 310 +M+ + A D I+ ++G T+AE GLP I ++P G++ NV + G GV Sbjct: 259 RMDLALAAADAILCRSGAMTVAEVSAVGLPGI---YVPLPHGNGEQELNVRPITHAGGGV 315 Query: 311 FSKSPKETAELVAHWFGPGSEDRKRMSENAL 403 K + T V+ P D R +L Sbjct: 316 IIKDAELTGHRVSQEVIPLLRDETRWQAASL 346
>MURG_RHOS4 (Q3J4M2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 364 Score = 32.7 bits (73), Expect = 0.81 Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPG---QEVGNVPYVVD 295 +++ F T + + + +I+++G ++A+ I G P IL F + N +V+ Sbjct: 243 EVKTFFTDIPRRLSEAQLVISRSGASSVADISIIGRPAILVPFAAATADHQTANARGLVE 302 Query: 296 NGAGVF-SKSPKETAELVAHWFGPGSED--RKRMSENALKLAQPEAVFDIVRDIHELSQE 466 A + +S + L H S+ ++M+ NAL +P+A +V + L+++ Sbjct: 303 AEAAILIPESALDPGALSEHIAAVLSQPDAARQMARNALAHGRPDATERLVEVVEHLARK 362 Query: 467 Q 469 + Sbjct: 363 E 363
>MURG_BACLD (Q65JY0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 366 Score = 32.7 bits (73), Expect = 0.81 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = +2 Query: 128 IRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAG 307 ++ F QM +++ A D ++ +AG TIAE G+P +L IP PYV N Sbjct: 246 VQPFLHQMPEYLKAFDVVVGRAGATTIAEITALGIPSVL---IPS------PYVTANHQE 296 Query: 308 VFSKS 322 V ++S Sbjct: 297 VNARS 301
>MURG_GLOVI (Q7MBC4) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 357 Score = 32.0 bits (71), Expect = 1.4 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDF---IPGQEVGNVPYVVD 295 +I F +M + D I++AG T++E L+ G P +L + + N +V Sbjct: 238 RIYAFWEKMAPLLSRADLAISRAGAATLSELLVTGTPSLLIPYPFAAEDHQSVNAAALVR 297 Query: 296 NGAGVFSKSPKETAELV---AHWFGPGSEDRKRMSENALKLAQPEA---VFDIVRD 445 GA + +A L+ E RM+ +A +LA P+A D+VR+ Sbjct: 298 AGAALQFSQAALSAPLLDRTVQALLDNPETLARMAASARRLAVPDAARRTADLVRE 353
>MURG_MANSM (Q65RY6) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 31.6 bits (70), Expect = 1.8 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPY 286 +KI F M + D +I ++G T+ E G P I F+P Q+ N Y Sbjct: 239 VKITEFIDNMAEAYAWADIVICRSGALTVCELAAVGTPAI---FVPFRHKDQQQYLNAKY 295 Query: 287 VVDNGAGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLAQPEAVF 430 + D GA + + A+++ + DR+++ A+K Q A F Sbjct: 296 LADVGAAKIVQQAELNADVLVDLL--TNLDREQLLAMAIKAKQMSAPF 341
>FCTA_SHIFL (P69903) Formyl-coenzyme A transferase (EC 2.8.3.16) (Formyl-CoA| transferase) Length = 416 Score = 31.6 bits (70), Expect = 1.8 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 7/120 (5%) Frame = +2 Query: 143 TQMEKWMGACDCIITKAGPGTIAEALIRGLPII-------LNDFIPGQEVGNVPYVVDNG 301 TQM W GA I + G G + +R +P I LN E+ G Sbjct: 23 TQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNT---KTAEG 79 Query: 302 AGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQEQGVKA 481 V K +E A+++ F PG+ D + ++ P +F ++ E S VKA Sbjct: 80 KEVMEKLIRE-ADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKA 138
>FCTA_ECOLI (P69902) Formyl-coenzyme A transferase (EC 2.8.3.16) (Formyl-CoA| transferase) Length = 416 Score = 31.6 bits (70), Expect = 1.8 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 7/120 (5%) Frame = +2 Query: 143 TQMEKWMGACDCIITKAGPGTIAEALIRGLPII-------LNDFIPGQEVGNVPYVVDNG 301 TQM W GA I + G G + +R +P I LN E+ G Sbjct: 23 TQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNT---KTAEG 79 Query: 302 AGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQEQGVKA 481 V K +E A+++ F PG+ D + ++ P +F ++ E S VKA Sbjct: 80 KEVMEKLIRE-ADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKA 138
>FCTA_ECO57 (Q8XBR7) Formyl-coenzyme A transferase (EC 2.8.3.16) (Formyl-CoA| transferase) Length = 416 Score = 31.6 bits (70), Expect = 1.8 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 7/120 (5%) Frame = +2 Query: 143 TQMEKWMGACDCIITKAGPGTIAEALIRGLPII-------LNDFIPGQEVGNVPYVVDNG 301 TQM W GA I + G G + +R +P I LN E+ G Sbjct: 23 TQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNT---KTAEG 79 Query: 302 AGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQEQGVKA 481 V K +E A+++ F PG+ D + ++ P +F ++ E S VKA Sbjct: 80 KEVMEKLIRE-ADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKA 138
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +1 Query: 328 GNRRTCRPLVRSRLRGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGE 477 G+R P + GP+ + GER E+GPAG PGA+GE Sbjct: 689 GDRGEAGPAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGE 738
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/36 (50%), Positives = 21/36 (58%) Frame = +1 Query: 370 RGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGE 477 RGP+ G++ E GP G RV G P A PG RGE Sbjct: 2733 RGPEGLQGQKGERGPPGERVVGAPGVPGA-PGERGE 2767
>MURG_WOLSU (Q7MAD4) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 336 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = +2 Query: 107 EWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP------GQE 268 E +P+++ F+ + + M D I++AG ++ E GLP + FIP + Sbjct: 221 ERSIPVELFAFDRAIHQKMQQADLAISRAGASSLWELGANGLPAL---FIPYPFAAGDHQ 277 Query: 269 VGNVPYVVDNGAGVFSKSPKETAELV 346 N +++D G G + + E++ Sbjct: 278 YYNAKFILDQGLGWMVRQENLSTEVL 303
>Y582_METMA (Q8PZB2) Hypothetical glycosyl transferase MM0582 (EC 2.-.-.-)| Length = 376 Score = 31.6 bits (70), Expect = 1.8 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPII-LNDFIPGQEVGNVPYVVDN 298 ++ GF + D +IT G GTI E+L GLPI+ D ++ N + + Sbjct: 259 VEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSFPDEKHAEQENNASVLEEA 318 Query: 299 GAG---VFSKSPKETAELVAHWFGPGSEDRK--RMSENALKLAQPEAVFDIVRDIH 451 G G + P+ + F + +K R+ E A L P AV + + H Sbjct: 319 GYGKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVLDGPAAVRKFLEEKH 374
>MURG_LACPL (Q88V81) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 31.6 bits (70), Expect = 1.8 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 6/120 (5%) Frame = +2 Query: 83 LSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL--NDFI 256 + + L A +KI + M + I+ +AG +IAE G+P IL + ++ Sbjct: 231 IRNGLSATALAPNVKIEPYIKNMPAILPEVAVILGRAGATSIAEITALGIPSILVPSPYV 290 Query: 257 PG-QEVGNVPYVVDNGAGVFSKSPKET-AELVAHWFG--PGSEDRKRMSENALKLAQPEA 424 + N +V+ GA K T LVA G + R+ M+ NA KL P+A Sbjct: 291 TNDHQTKNAQSLVNAGAAELIKEADLTGTSLVAALDGLLQSTTHRETMAANAKKLGMPDA 350
>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor| Length = 1317 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 65 CGRNKTLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGT 205 C T S Q +W+ I+G+E ++EK CDC++T + T Sbjct: 128 CNLKVTECLSKQYEDWRNVTLIKGYERELEK----CDCVLTSSSTET 170
>MURG_TREPA (O83535) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 384 Score = 31.2 bits (69), Expect = 2.4 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Frame = +2 Query: 161 MGACDCIITKAGPGTIAEALIRGLPIIL----NDFIPGQEVGNVPYVVDNGAGVFSKSPK 328 + A ++++AG + E + G P+IL G ++ N Y +GA ++ Sbjct: 273 LAASALVLSRAGANAVWECAVLGKPMILFPLERGSSRGDQIENAEYFSAHGAACILRAQD 332 Query: 329 E----TAELVAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQE 466 E L+ F P + M+ + L A +DI + + +E Sbjct: 333 EKGHQLVSLLTELFHPSCARIEEMARASYTLGIGNAAYDIAQQLQTFIKE 382
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = +1 Query: 328 GNRRTCRPLVRSRLRGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGE 477 G+R P + GP+ GER E+GPAG PGA+GE Sbjct: 691 GDRGEAGPAGPAGPAGPRGTPGERGEVGPAGPNGFAGPAGAAGQPGAKGE 740
>LPXB_CHLCV (Q821Z3) Lipid-A-disaccharide synthase (EC 2.4.1.182)| Length = 626 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 7/50 (14%) Frame = -1 Query: 175 ITSPHPLFHLGLESPNLYWH-------FPFKSLQ*RAQCFVPTTNDNKLP 47 + SP+ FHL L PN+YWH F F S C++ N + LP Sbjct: 123 MASPN-FFHLPLPPPNIYWHIVGCLGLFTFSSRFFIQWCYLEMNNHSTLP 171
>MURG_BIFLO (Q8CY50) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 393 Score = 30.8 bits (68), Expect = 3.1 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Frame = +2 Query: 167 AC-DCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGVFSKSPK 328 AC D +I +AG G+++E GLP I ++P G++ N VV+ G G+ Sbjct: 286 ACADLVICRAGAGSVSELAALGLPAI---YVPLPIGNGEQRFNAEPVVNAGGGLLVADKD 342 Query: 329 ETAELVAHWFGPGSEDRKRMSE 394 T + V D +R++E Sbjct: 343 LTPQWVHEHVPDLLADHERLAE 364
>Y453_METAC (Q8TTI0) Hypothetical glycosyl transferase MA0453 (EC 2.-.-.-)| Length = 388 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPII-LNDFIPGQEVGNVPYVVDN 298 ++ GF + D +IT G GTI E+L GLP++ D ++ N + D Sbjct: 259 VEFTGFTDNPFPYYRGSDLVITAGGHGTIMESLAFGLPVLSFPDEKHTEQENNATVLEDA 318 Query: 299 GAG 307 G G Sbjct: 319 GYG 321
>MURG_BACHD (Q9K9T0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +2 Query: 128 IRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDN 298 ++ F M + A D I+ +AG T+AE GLP IL IP PYV +N Sbjct: 246 VQPFIHNMPDVLSAVDLIVARAGATTLAEITALGLPSIL---IPS------PYVTNN 293
>MURG_PSESM (Q87WY5) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 356 Score = 30.4 bits (67), Expect = 4.0 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVD 295 ++ F M + D ++ +AG TI+E GLP I L I + N Y+ Sbjct: 237 QVAPFIQNMAQAYSWADLVVCRAGALTISELAAAGLPSLLIPLPHAIDDHQSRNADYLAR 296 Query: 296 NGAG-VFSKSPKETAELVAHW--FGPGSEDRKRMSENALKLAQPEAVFDIV 439 GA V ++ AE+ A E M+ A LA+P+A +V Sbjct: 297 EGAAFVMPQATTGAAEMAARLKEVLMQPEQLNSMARTARSLAKPDATNTVV 347
>MURG_PSE14 (Q48EF8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 356 Score = 30.4 bits (67), Expect = 4.0 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVD 295 ++ F M + D ++ +AG TI+E GLP I L I + N Y+ Sbjct: 237 QVAPFIQNMAQAYSWADLVVCRAGALTISELAAAGLPSLLIPLPHAIDDHQSRNADYLAR 296 Query: 296 NGAG-VFSKSPKETAELVAHW--FGPGSEDRKRMSENALKLAQPEAVFDIV 439 GA V ++ AE+ A E M+ A LA+P+A +V Sbjct: 297 EGAAFVMPQATTGAAEMAARLKEVLMQPEQLNSMARTARSLAKPDATNTVV 347
>MURG_LACAC (Q5FKV2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 368 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/55 (25%), Positives = 30/55 (54%) Frame = +2 Query: 80 TLSSSLQALEWKMPIKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 244 ++ L+ +++ IKI + M + C+++++G +IAE G+P+IL Sbjct: 235 SVQKKLEGVDYGDNIKILPYIQNMPALLPEMTCVVSRSGATSIAEFTALGVPVIL 289
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +1 Query: 370 RGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGEGADLQLPDI 504 +GP+ G GP GSR P LPG G D+ LP + Sbjct: 607 QGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGL 651
>MURG_PSEPK (Q88N76) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 359 Score = 30.4 bits (67), Expect = 4.0 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP---IILNDFIPGQEVGNVPYVVD 295 ++ F M + G D ++ +AG T++E GLP + L I + N Y+ Sbjct: 240 QVEPFIKDMAQAYGWADLVVCRAGALTVSELAAAGLPSMLVPLPHAIDDHQTHNAQYLAR 299 Query: 296 NGAGVFSKSPKETAELVAHWFGP---GSEDRKRMSENALKLAQPEAVFDIV 439 GA A +A E M+ A +LA+P A +V Sbjct: 300 EGAAFLMPQATTGAAQLAERLNEVLMQPEKLNVMAGTARRLAKPAATSTVV 350
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 373 GPQENVGERVEIGPAGSRVRHRQGHPRALPGARGE 477 GP+ + GER E+GPAG PGA+GE Sbjct: 706 GPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGE 740
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 373 GPQENVGERVEIGPAGSRVRHRQGHPRALPGARGE 477 GP+ + GER E+GPAG PGA+GE Sbjct: 712 GPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGE 746
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 373 GPQENVGERVEIGPAGSRVRHRQGHPRALPGARGE 477 GP+ + GER E+GPAG PGA+GE Sbjct: 712 GPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGE 746
>COX3_TRIRU (Q36837) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 269 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = -1 Query: 211 SNGAWSSLCYNAITSPHPLFHLGLESPNLYWHF 113 S G W L Y+ +T H HLG ES LYWHF Sbjct: 224 SVGLWRLLGYH-LTDHH---HLGYESGILYWHF 252
>Y1255_METJA (Q58652) Hypothetical glycosyl transferase MJ1255 (EC 2.-.-.-)| Length = 394 Score = 30.4 bits (67), Expect = 4.0 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP-IILNDFIPGQEVGNVPYVVDN 298 ++I T M++ + + I++ G TI EAL G P I++ D ++ N V D Sbjct: 252 VEIIPITTNMKELIKNAELIVSHGGHSTIMEALSFGKPLIVIPDLDHPEQGNNAKKVHDL 311 Query: 299 GAGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQE 466 G G+ + S KE L + K NA K+ + +D ++I ++ E Sbjct: 312 GCGI-ALSYKELYRLEEAIL--DIRNMKMYKRNASKMKELAKKYDGKKNIKKIIDE 364
>MURG_NOCFA (Q5YYX9) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 378 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 143 TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAG 307 ++M+ A D ++ ++G T+AE GLP ++P G++ N +V G G Sbjct: 267 SRMDLAYAAADAVVCRSGAMTVAEVSAVGLPAF---YVPLPHGNGEQEFNARPIVAQGGG 323 Query: 308 VFSKSPKETAELVAHWFGPGSEDRKRMSE 394 + T + V P DR R++E Sbjct: 324 RIVPDSELTPKYVIDEVIPLLLDRTRLTE 352
>MEOX1_MOUSE (P32442) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 253 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +1 Query: 376 PQENVGERVEIGPAGSRVRHRQGHPRALPGARGEGAD 486 P G+R+ +GPAGS G P + G G G D Sbjct: 95 PISEAGQRLNLGPAGSAREMGAGSPGLVDGTAGLGED 131
>CPB2_CAERE (Q6E3F2) Cytoplasmic polyadenylation element-binding protein 2| Length = 571 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -1 Query: 280 DVADFLSRYEVIKDDRKTPNQGFSNGAWSSLCYNAITSPHPLFHLGLESPNLYWHFPFKS 101 D+ +F SRY ++ D + + G + + S+C +A +S HL + SP PF S Sbjct: 251 DILNFFSRYGRLQVDWPSKHFGCKSDSDPSVCGDATSSFQQTSHLAMSSPPFGQINPFMS 310
>MURG_ENTHR (O07670) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 360 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +2 Query: 122 IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGN 277 + I+ + +M + M + D ++ +AG +IAE GLP IL IP V N Sbjct: 240 VSIQPYINKMAEVMASSDLLVGRAGATSIAELTALGLPAIL---IPSPYVTN 288
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 Query: 367 LRGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGEGAD 486 LRGP+ ++GE+ E GP G P+ LPGA G D Sbjct: 830 LRGPKGDLGEKGERGPPGR-------GPKGLPGAIGLPGD 862
>TKT_MYCTU (O06811) Transketolase (EC 2.2.1.1) (TK)| Length = 700 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/76 (23%), Positives = 28/76 (36%) Frame = +2 Query: 134 GFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVF 313 G++ + W + T+A G + AL LP + ++ GA F Sbjct: 360 GWDADLPHWEPGSKALATRAASGAVLSALGPKLPELWGG---SADLAGSNNTTIKGADSF 416 Query: 314 SKSPKETAELVAHWFG 361 T E AHW+G Sbjct: 417 GPPSISTKEYTAHWYG 432
>TKT_MYCBO (P59956) Transketolase (EC 2.2.1.1) (TK)| Length = 700 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/76 (23%), Positives = 28/76 (36%) Frame = +2 Query: 134 GFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVF 313 G++ + W + T+A G + AL LP + ++ GA F Sbjct: 360 GWDADLPHWEPGSKALATRAASGAVLSALGPKLPELWGG---SADLAGSNNTTIKGADSF 416 Query: 314 SKSPKETAELVAHWFG 361 T E AHW+G Sbjct: 417 GPPSISTKEYTAHWYG 432
>ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6)| Length = 348 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +1 Query: 346 RPLVRSRLRGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGEG 480 RPL R RGP G GP G Q P+ PG +G G Sbjct: 258 RPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQGEPGLQGYG 302
>GLNA2_MYCTU (P64245) Probable glutamine synthetase 2 (EC 6.3.1.2)| (Glutamate--ammonia ligase 2) Length = 446 Score = 30.0 bits (66), Expect = 5.3 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 18/93 (19%) Frame = +2 Query: 257 PGQEVGNVPYVVDNGAGVFSKSPKETA------------------ELVAHWFGPGSEDRK 382 PG E G+VP VDN AG F ++ ++A E H PG ++ Sbjct: 140 PGPEDGSVPVPVDN-AGYFDQAVHDSALNFRRHAIDALEFMGISVEFSHHEGAPGQQEID 198 Query: 383 RMSENALKLAQPEAVFDIVRDIHELSQEQGVKA 481 +AL +A F V I E++ E+G +A Sbjct: 199 LRFADALSMADNVMTFRYV--IKEVALEEGARA 229
>GLNA2_MYCBO (P64246) Probable glutamine synthetase 2 (EC 6.3.1.2)| (Glutamate--ammonia ligase 2) Length = 446 Score = 30.0 bits (66), Expect = 5.3 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 18/93 (19%) Frame = +2 Query: 257 PGQEVGNVPYVVDNGAGVFSKSPKETA------------------ELVAHWFGPGSEDRK 382 PG E G+VP VDN AG F ++ ++A E H PG ++ Sbjct: 140 PGPEDGSVPVPVDN-AGYFDQAVHDSALNFRRHAIDALEFMGISVEFSHHEGAPGQQEID 198 Query: 383 RMSENALKLAQPEAVFDIVRDIHELSQEQGVKA 481 +AL +A F V I E++ E+G +A Sbjct: 199 LRFADALSMADNVMTFRYV--IKEVALEEGARA 229
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 Query: 367 LRGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGEGAD 486 LRGP+ ++GE+ E GP G P+ LPGA G D Sbjct: 234 LRGPKGDLGEKGERGPPGR-------GPKGLPGAIGLPGD 266
>MURG_MYCLE (O69552) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 407 Score = 29.6 bits (65), Expect = 6.9 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = +2 Query: 146 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPG---QEVGNVPYVVDNGAGVFS 316 +M+ A D +I ++G T+AE GLP I F G Q + +P VV+ G G+ Sbjct: 282 RMDLAYAAADLVICRSGAMTVAEVSAVGLPAIYVPFPIGNGEQRLNALP-VVNAGGGLVV 340 Query: 317 KSPKETAELVA 349 T LVA Sbjct: 341 ADADLTPGLVA 351
>MURG_LEIXX (Q6AE64) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 358 Score = 29.6 bits (65), Expect = 6.9 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +2 Query: 125 KIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFI--PGQEVGNVPYVVDN 298 ++ G+ +M+ + D + +AG T+ E G+P + F G++ N VV Sbjct: 239 RLLGYCDRMDLALALADFAVARAGAATLCEFAALGVPAVYVPFPIGNGEQRHNAAGVVAA 298 Query: 299 GAGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLA 412 G GV V P DR R++E A + A Sbjct: 299 GGGVLVDDAGFLPAWVDAQLLPLLADRARVAEMAERAA 336
>COQ2_DROME (Q9VHS7) Para-hydroxybenzoate--polyprenyltransferase, mitochondrial| precursor (EC 2.5.1.-) (PHB:polyprenyltransferase) Length = 392 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 222 LGVFLSSLMTSYLDRKSATSLMSWTTAQACSPRAPRKPPNLS 347 LG+ L +L+ S +K S ++ +TA + P P+KP LS Sbjct: 351 LGIVLGTLLKSDESKKQRQSSLTTSTASSYVPALPQKPEVLS 392
>CMLE_NEUCR (P38677) Carboxy-cis,cis-muconate cyclase (EC 5.5.1.5)| (3-carboxy-cis,cis-muconate lactonizing enzyme) (CMLE) Length = 365 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 6/46 (13%) Frame = -2 Query: 480 AFTPCSWESSWMSLTMSNTASGWANFNAFSDILL------RSSEPG 361 A +PC W WM++T + GW + D L R EPG Sbjct: 313 AVSPCPWSDEWMAIT--DDQEGWLEIYRWKDEFLHRVARVRIPEPG 356
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 367 LRGPQENVGERVEIGPAGSRVRHRQGHPRALPGARGEGAD 486 LRGP+ ++GE+ E GP G P LPGA G D Sbjct: 830 LRGPKGDLGEKGERGPPGR-------GPNGLPGAIGLPGD 862
>FCTA_ECOL6 (Q8FFE8) Formyl-coenzyme A transferase (EC 2.8.3.16) (Formyl-CoA| transferase) Length = 416 Score = 29.3 bits (64), Expect = 9.0 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 7/120 (5%) Frame = +2 Query: 143 TQMEKWMGACDCIITKAGPGTIAEALIRGLPII-------LNDFIPGQEVGNVPYVVDNG 301 TQM W GA I + G + +R +P I LN E+ G Sbjct: 23 TQMLAWFGADVIKIERPSVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTK---TAEG 79 Query: 302 AGVFSKSPKETAELVAHWFGPGSEDRKRMSENALKLAQPEAVFDIVRDIHELSQEQGVKA 481 V K +E A+++ F PG+ D + ++ P +F ++ E S VKA Sbjct: 80 KEVMEKLIRE-ADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKA 138
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 373 GPQENVGERVEIGPAGSRVRHRQGHPRALPGARGEGADLQLP 498 G + + GE GPAG R R LPG G G + +P Sbjct: 373 GKRGSTGEVGATGPAGLRGARGGAGTRGLPGLEGRGGPIGMP 414
>MURG_STRCO (Q9ZBA5) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 364 Score = 29.3 bits (64), Expect = 9.0 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Frame = +2 Query: 146 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP-----GQEVGNVPYVVDNGAGV 310 +M+ A D ++ +AG T+AE GLP ++P G++ N VV G G+ Sbjct: 249 RMDLAYAAADMMLCRAGAMTVAELSAVGLPAA---YVPLPIGNGEQRLNAQPVVKAGGGL 305 Query: 311 FSKSPKETAELVAHWFGPGSEDRKRMSENALK-LAQPEAVFDIVRDIHELSQ 463 + AEL W + +N L LA P ++++ R E + Sbjct: 306 L----VDDAELTPEW----------LQQNVLPVLADPHRLYEMSRAAAEFGR 343
>COX3_EMENI (P00421) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 269 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -1 Query: 205 GAWSSLCYNAITSPHPLFHLGLESPNLYWHF 113 G W Y+ +T H HLG ES LYWHF Sbjct: 226 GLWRLAAYH-LTDHH---HLGYESGILYWHF 252
>MURG_ENTFA (O07109) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +2 Query: 83 LSSSLQALEWKMP-IKIRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIP 259 L SL+ E K+ I ++ + +M + M D ++ +AG +IAE GLP IL IP Sbjct: 231 LQESLKFSEKKLTNISVQPYIDKMVEVMANTDLMVGRAGATSIAEFTALGLPAIL---IP 287 Query: 260 GQEVGN 277 V N Sbjct: 288 SPYVTN 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,375,237 Number of Sequences: 219361 Number of extensions: 2094474 Number of successful extensions: 7548 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 6755 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7506 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
