>MUTS_BRUSU (Q8G310) DNA mismatch repair protein mutS|
          Length = 910

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 306 HATTALGSVRASSTELMNLESVSACNVHQNPLNKELSYAVSVTPDSVEHDDTV 464
           H  T   ++R ++TEL  LES  A N     L+ EL+    +T ++V H D++
Sbjct: 526 HRQTMANAMRFTTTELAELESKIA-NAADRALSIELAIFEELTAEAVAHADSI 577

>MUTS_BRUME (Q8YES6) DNA mismatch repair protein mutS|
          Length = 910

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 306 HATTALGSVRASSTELMNLESVSACNVHQNPLNKELSYAVSVTPDSVEHDDTV 464
           H  T   ++R ++TEL  LES  A N     L+ EL+    +T ++V H D++
Sbjct: 526 HRQTMANAMRFTTTELAELESKIA-NAADRALSIELAIFEELTAEAVAHADSI 577

>MUTS_BRUAB (Q57FM9) DNA mismatch repair protein mutS|
          Length = 910

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 306 HATTALGSVRASSTELMNLESVSACNVHQNPLNKELSYAVSVTPDSVEHDDTV 464
           H  T   ++R ++TEL  LES  A N     L+ EL+    +T ++V H D++
Sbjct: 526 HRQTMANAMRFTTTELAELESKIA-NAADRALSIELAIFEELTAEAVAHADSI 577

>DSE3_CANGA (Q6FWU4) Protein DSE3|
          Length = 438

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +3

Query: 288 AISEDGHATTALGSVRASSTELMNLESVSACNVHQNPLNKELSYAVSVTPDSVE 449
           AIS DG  TTALGS+ + +  + NL+ +   ++    ++ E+     V  ++VE
Sbjct: 330 AISHDGSYTTALGSIPSLAGSVDNLDILDQKDILSPTVSNEIITVKPVPQNTVE 383

>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c|
           precursor
          Length = 670

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
 Frame = +3

Query: 168 KETTPDGISAVAREAEPGDGPCTEPTCETAVH--VNECSAEAAISEDGHATTALGSVRAS 341
           +ETT           E      T  TC +     ++  S  + +SE G ++ ++ S   S
Sbjct: 553 EETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPS 612

Query: 342 STELMNLESVSACNVHQNPLNKELSYAVSVT 434
           ST  M    +S+ +VH +  +   S + S++
Sbjct: 613 STLSMTTSHLSSSSVHSSSAHSSSSRSSSMS 643

>FBN2_MOUSE (Q61555) Fibrillin-2 precursor|
          Length = 2907

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 225  GPCTEPTCETAVHVNECSAEAAISEDGHATTALGSVRASSTE 350
            G    P  E  V  NEC  +  I E+G     +GS R    E
Sbjct: 2319 GMARRPDGEGCVDENECRTKPGICENGRCVNIIGSYRCECNE 2360

>Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410|
          Length = 279

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 270 ECSAEAAISEDGHATTALGSVRASSTE-LMNLESVSACNVHQNPLNKELSY 419
           EC    A++  GHA    G    +  E  ++    +AC  H+N   KEL Y
Sbjct: 77  ECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

>FBN2_HUMAN (P35556) Fibrillin-2 precursor|
          Length = 2911

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 225  GPCTEPTCETAVHVNECSAEAAISEDGHATTALGSVRASSTE 350
            G    P  E  V  NEC  +  I E+G     +GS R    E
Sbjct: 2325 GMARRPDGEGCVDENECRTKPGICENGRCVNIIGSYRCECNE 2366

>SPB4_NEUCR (Q873H9) ATP-dependent rRNA helicase spb-4 (EC 3.6.1.-)|
          Length = 654

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/71 (28%), Positives = 26/71 (36%)
 Frame = +3

Query: 237 EPTCETAVHVNECSAEAAISEDGHATTALGSVRASSTELMNLESVSACNVHQNPLNKELS 416
           +P  +T V ++ C         G A   L   R           V    V Q P+     
Sbjct: 378 DPPTDTKVFIHRCGRAGRAGRRGLAVVLLQPGREEGY-------VQLLEVRQTPITPLEK 430

Query: 417 YAVSVTPDSVE 449
            A+SVTPD VE
Sbjct: 431 PAISVTPDEVE 441

>INVO_MOUSE (P48997) Involucrin|
          Length = 467

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
 Frame = -2

Query: 495 QQLLPGEPQVLLCHRAQQSQELLKQHN*VLCSEGFDEHCKQIHSPNSLVPLKTLGRCQGP 316
           +Q LP EPQ LLC   QQ QE   Q   +   +   +  +Q          +  G C G 
Sbjct: 104 KQQLPQEPQGLLCLEQQQQQEPQMQEQHLRQQQQQQQQQQQQQQQQQQQETQEQGLCLGQ 163

Query: 315 LWRDHPQK*QLPH--CIRSHEQQ 253
             +   Q   +P    +R H+++
Sbjct: 164 KQQQQQQDMLVPQELHLRQHQEK 186


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,131,129
Number of Sequences: 219361
Number of extensions: 1059829
Number of successful extensions: 3597
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3591
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)