ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdg15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
2ref|XM_466771.1| Oryza sativa (japonica cultivar-group), mRNA 149 7e-33
3gb|AY103703.1| Zea mays PCO150529 mRNA sequence 145 1e-31
4gb|BT016927.1| Zea mays clone E04912703A12.c mRNA sequence 121 2e-24
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
6dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
7dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
8dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone... 52 0.001
9gb|DQ430309.1| Sorghum bicolor voucher PI585454 locus pSB1901 ge... 48 0.020
10gb|DQ430308.1| Sorghum bicolor voucher PI267539 locus pSB1901 ge... 48 0.020
11gb|DQ430307.1| Sorghum bicolor voucher PI267408 locus pSB1901 ge... 48 0.020
12gb|DQ430306.1| Sorghum bicolor voucher PI221607 locus pSB1901 ge... 48 0.020
13gb|DQ430305.1| Sorghum bicolor voucher PI152702 locus pSB1901 ge... 48 0.020
14gb|DQ430304.1| Sorghum bicolor voucher NSL92371 locus pSB1901 ge... 48 0.020
15gb|DQ430303.1| Sorghum bicolor voucher NSL87902b locus pSB1901 g... 48 0.020
16gb|DQ430302.1| Sorghum bicolor voucher NSL87902a locus pSB1901 g... 48 0.020
17gb|DQ430301.1| Sorghum bicolor voucher NSL87666 locus pSB1901 ge... 48 0.020
18gb|DQ430300.1| Sorghum bicolor voucher NSL77217 locus pSB1901 ge... 48 0.020
19gb|DQ430299.1| Sorghum bicolor voucher NSL77034 locus pSB1901 ge... 48 0.020
20gb|DQ430298.1| Sorghum bicolor voucher NSL56174 locus pSB1901 ge... 48 0.020
21gb|DQ430297.1| Sorghum bicolor voucher NSL56003 locus pSB1901 ge... 48 0.020
22gb|DQ430296.1| Sorghum bicolor voucher NSL55243 locus pSB1901 ge... 48 0.020
23gb|DQ430295.1| Sorghum bicolor voucher NSL51365 locus pSB1901 ge... 48 0.020
24gb|DQ430294.1| Sorghum bicolor voucher NSL51030 locus pSB1901 ge... 48 0.020
25gb|DQ430293.1| Sorghum bicolor voucher NSL50875 locus pSB1901 ge... 48 0.020
26gb|DQ430292.1| Sorghum bicolor voucher BTx623 locus pSB1901 geno... 48 0.020
27ref|XM_843924.1| PREDICTED: Canis familiaris similar to nucleola... 46 0.078
28ref|XM_514308.1| PREDICTED: Pan troglodytes similar to KIAA0470 ... 44 0.31
29gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, com... 44 0.31
30gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complet... 44 0.31
31ref|NM_014812.1| Homo sapiens centrosomal protein 170kDa (CEP170... 44 0.31
32ref|XM_496715.2| PREDICTED: Homo sapiens centrosomal protein 170... 44 0.31
33gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, comp... 44 0.31
34dbj|AB007939.1| Homo sapiens mRNA for KIAA0470 protein, partial cds 44 0.31
35gb|BC050722.1| Homo sapiens centrosomal protein 170kDa, mRNA (cD... 44 0.31
36dbj|AB022659.1| Homo sapiens mRNA for KARP-1-binding protein 3, ... 44 0.31
37dbj|AB022658.1| Homo sapiens mRNA for KARP-1-binding protein 2 (... 44 0.31
38dbj|AB022657.1| Homo sapiens mRNA for KARP-1-binding protein 1 (... 44 0.31
39gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complet... 42 1.2
40dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
41gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosom... 40 4.8
42gb|AC129320.5| Mus musculus BAC clone RP24-133J7 from chromosome... 40 4.8
43gb|AC164551.2| Mus musculus BAC clone RP23-365G9 from chromosome... 40 4.8
44emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, c... 40 4.8
45emb|BX538242.1|HSM806479 Homo sapiens genomic DNA; cDNA DKFZp686... 40 4.8
46gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 4.8
47gb|DQ430310.1| Sorghum propinquum locus pSB1901 genomic sequence 40 4.8
48gb|AC092171.4| Homo sapiens BAC clone RP11-1275H24 from 7, compl... 40 4.8
49gb|AC097632.2| Homo sapiens chromosome 3 clone RP11-90H15, compl... 40 4.8
50emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in... 40 4.8
51gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, co... 40 4.8
52gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequ... 40 4.8
53gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome... 40 4.8
54emb|AL844562.3| Mouse DNA sequence from clone RP23-230F7 on chro... 40 4.8 
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full
            insert sequence
          Length = 1462

 Score =  153 bits (77), Expect = 5e-34
 Identities = 138/157 (87%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtacaccaccaagnaaggaatcccctctcggtgtgccgacgcagtctgcccacccagctc 61
            ||||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||||||
Sbjct: 1151 gtacaccaccaag-aaggaatctcctctcggtgttcccacgcagtctgctcacccagctc 1209

                                                                        
Query: 62   gtttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggat 121
            | ||||| || |||||||||||| | || ||| | ||||||||||||||||| || || |
Sbjct: 1210 gcttctctccagatgacaagtactcacgccagagatacctgttgaagaagagattcgggt 1269

                                                 
Query: 122  tgctgccaacccagcagccagcacaaaagtactgaag 158
            |||||||||||||  ||||||||| ||||||||||||
Sbjct: 1270 tgctgccaacccaaaagccagcaccaaagtactgaag 1306
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>ref|XM_466771.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 777

 Score =  149 bits (75), Expect = 7e-33
 Identities = 136/155 (87%), Gaps = 1/155 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtacaccaccaagnaaggaatcccctctcggtgtgccgacgcagtctgcccacccagctc 61
           ||||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||||||
Sbjct: 624 gtacaccaccaag-aaggaatctcctctcggtgttcccacgcagtctgctcacccagctc 682

                                                                       
Query: 62  gtttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggat 121
           | ||||| || |||||||||||| | || ||| | ||||||||||||||||| || || |
Sbjct: 683 gcttctctccagatgacaagtactcacgccagagatacctgttgaagaagagattcgggt 742

                                              
Query: 122 tgctgccaacccagcagccagcacaaaagtactga 156
           |||||||||||||  ||||||||| ||||||||||
Sbjct: 743 tgctgccaacccaaaagccagcaccaaagtactga 777
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>gb|AY103703.1| Zea mays PCO150529 mRNA sequence
          Length = 595

 Score =  145 bits (73), Expect = 1e-31
 Identities = 137/157 (87%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacaccaccaagnaaggaatcccctctcggtgtgccgacgcagtctgcccacccagctcg 62
           |||||||||||| ||||| || ||||| || ||||||||||||||||| |||||||||||
Sbjct: 179 tacaccaccaag-aaggagtcgcctcttggggtgccgacgcagtctgctcacccagctcg 237

                                                                       
Query: 63  tttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggatt 122
            ||||| || |||||||||||| | || ||||| ||||||||||||||||| |||||| |
Sbjct: 238 cttctcaccagatgacaagtactctcgccagcggtacctgttgaagaagagatttggact 297

                                                
Query: 123 gctgccaacccagcagccagcacaaaagtactgaagc 159
            |||||||| ||| |||||||||  ||||||||||||
Sbjct: 298 tctgccaacgcagaagccagcactgaagtactgaagc 334
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>gb|BT016927.1| Zea mays clone E04912703A12.c mRNA sequence
          Length = 510

 Score =  121 bits (61), Expect = 2e-24
 Identities = 134/157 (85%), Gaps = 1/157 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   tacaccaccaagnaaggaatcccctctcggtgtgccgacgcagtctgcccacccagctcg 62
           |||||||||||| ||||| || ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 309 tacaccaccaag-aaggagtcacctcttggggtgccaacgcagtctgctcacccagctcg 251

                                                                       
Query: 63  tttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggtttggatt 122
            ||||| || |||||||||||| | || ||||| ||||||||||||||||| |||||| |
Sbjct: 250 gttctcaccagatgacaagtactctcgccagcgatacctgttgaagaagagatttggact 191

                                                
Query: 123 gctgccaacccagcagccagcacaaaagtactgaagc 159
            |||||||| ||| | |||| ||  ||||||||||||
Sbjct: 190 tctgccaacgcagaatccaggaccgaagtactgaagc 154
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                            
Query: 56       cagctcgtttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggt 115
                ||||||| ||||| || |||||||||||| | || ||| | ||||||||||||||||| |
Sbjct: 24593226 cagctcgcttctctccagatgacaagtactcacgccagagatacctgttgaagaagagat 24593167

                                                           
Query: 116      ttggattgctgccaacccagcagccagcacaaaagtactgaag 158
                | || ||||||||||||||  ||||||||| ||||||||||||
Sbjct: 24593166 tcgggttgctgccaacccaaaagccagcaccaaagtactgaag 24593124



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 16       aaggaatcccctctcggtgtgccgacgcagtctgcccacccag 58
                |||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 24594303 aaggaatctcctctcggtgttcccacgcagtctgctcacccag 24594261



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 129      aacccagcagccagcacaaaa 149
                |||||||||||||||||||||
Sbjct: 33814158 aacccagcagccagcacaaaa 33814138
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>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1014_H03
          Length = 132696

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                          
Query: 56     cagctcgtttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggt 115
              ||||||| ||||| || |||||||||||| | || ||| | ||||||||||||||||| |
Sbjct: 107327 cagctcgcttctctccagatgacaagtactcacgccagagatacctgttgaagaagagat 107268

                                                         
Query: 116    ttggattgctgccaacccagcagccagcacaaaagtactgaag 158
              | || ||||||||||||||  ||||||||| ||||||||||||
Sbjct: 107267 tcgggttgctgccaacccaaaagccagcaccaaagtactgaag 107225



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 16     aaggaatcccctctcggtgtgccgacgcagtctgcccacccag 58
              |||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 108404 aaggaatctcctctcggtgttcccacgcagtctgctcacccag 108362
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>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C01
          Length = 124548

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                         
Query: 56    cagctcgtttctccccggatgacaagtacgcccgtcagcgttacctgttgaagaagaggt 115
             ||||||| ||||| || |||||||||||| | || ||| | ||||||||||||||||| |
Sbjct: 37775 cagctcgcttctctccagatgacaagtactcacgccagagatacctgttgaagaagagat 37716

                                                        
Query: 116   ttggattgctgccaacccagcagccagcacaaaagtactgaag 158
             | || ||||||||||||||  ||||||||| ||||||||||||
Sbjct: 37715 tcgggttgctgccaacccaaaagccagcaccaaagtactgaag 37673



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 16    aaggaatcccctctcggtgtgccgacgcagtctgcccacccag 58
             |||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 38852 aaggaatctcctctcggtgttcccacgcagtctgctcacccag 38810
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>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069,
             complete sequence
          Length = 103659

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 104   tgaagaagaggtttggattgctgccaacccagcagcca 141
             |||||||| | ||||||||||| |||||||||||||||
Sbjct: 47981 tgaagaagcgatttggattgctaccaacccagcagcca 47944
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>gb|DQ430309.1| Sorghum bicolor voucher PI585454 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430308.1| Sorghum bicolor voucher PI267539 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430307.1| Sorghum bicolor voucher PI267408 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430306.1| Sorghum bicolor voucher PI221607 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430305.1| Sorghum bicolor voucher PI152702 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430304.1| Sorghum bicolor voucher NSL92371 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430303.1| Sorghum bicolor voucher NSL87902b locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430302.1| Sorghum bicolor voucher NSL87902a locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430301.1| Sorghum bicolor voucher NSL87666 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430300.1| Sorghum bicolor voucher NSL77217 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430299.1| Sorghum bicolor voucher NSL77034 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430298.1| Sorghum bicolor voucher NSL56174 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430297.1| Sorghum bicolor voucher NSL56003 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430296.1| Sorghum bicolor voucher NSL55243 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430295.1| Sorghum bicolor voucher NSL51365 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430294.1| Sorghum bicolor voucher NSL51030 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430293.1| Sorghum bicolor voucher NSL50875 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>gb|DQ430292.1| Sorghum bicolor voucher BTx623 locus pSB1901 genomic sequence
          Length = 550

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| |||||||||  ||||||||||||
Sbjct: 542 ctgccaacccagaagccagcaccgaagtactgaagc 507
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>ref|XM_843924.1| PREDICTED: Canis familiaris similar to nucleolar protein family A,
           member 3 (LOC607299), mRNA
          Length = 730

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 58  gctcgtttctccccggatgacaagtacgcccgtca 92
           ||||| |||||||| |||||||||||| |||||||
Sbjct: 403 gctcgcttctccccagatgacaagtactcccgtca 437
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>ref|XM_514308.1| PREDICTED: Pan troglodytes similar to KIAA0470 protein (LOC457861),
           mRNA
          Length = 1770

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 418 cagcacaaaactactgaagcactgaa 443
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>gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, complete sequence
          Length = 193579

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 326    gctctctgtgtgactttcatttggga 351
              |||||||||||| |||||||||||||
Sbjct: 107049 gctctctgtgtgtctttcatttggga 107074
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>gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complete sequence
          Length = 157951

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 140   cagcacaaaagtactgaagcactgaa 165
             |||||||||| |||||||||||||||
Sbjct: 62127 cagcacaaaactactgaagcactgaa 62152
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>ref|NM_014812.1| Homo sapiens centrosomal protein 170kDa (CEP170), mRNA
          Length = 6830

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>ref|XM_496715.2| PREDICTED: Homo sapiens centrosomal protein 170kDa-like (CEP170L),
           mRNA
          Length = 252

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 202 cagcacaaaactactgaagcactgaa 227
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>gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, complete sequence
          Length = 155355

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 140   cagcacaaaagtactgaagcactgaa 165
             |||||||||| |||||||||||||||
Sbjct: 90521 cagcacaaaactactgaagcactgaa 90496
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>dbj|AB007939.1| Homo sapiens mRNA for KIAA0470 protein, partial cds
          Length = 6456

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>gb|BC050722.1| Homo sapiens centrosomal protein 170kDa, mRNA (cDNA clone
           IMAGE:6067305), partial cds
          Length = 1667

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 774 cagcacaaaactactgaagcactgaa 799
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>dbj|AB022659.1| Homo sapiens mRNA for KARP-1-binding protein 3, complete cds
          Length = 6456

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>dbj|AB022658.1| Homo sapiens mRNA for KARP-1-binding protein 2 (KAB2), complete cds
          Length = 6536

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>dbj|AB022657.1| Homo sapiens mRNA for KARP-1-binding protein 1 (KAB1), complete cds
          Length = 6830

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 140 cagcacaaaagtactgaagcactgaa 165
           |||||||||| |||||||||||||||
Sbjct: 504 cagcacaaaactactgaagcactgaa 529
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>gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complete sequence
          Length = 168515

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 176   taagagatctgtttactttgg 196
             |||||||||||||||||||||
Sbjct: 55308 taagagatctgtttactttgg 55288
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>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1695_H09
          Length = 114721

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   aacccagcagccagcacaaaa 149
             |||||||||||||||||||||
Sbjct: 30736 aacccagcagccagcacaaaa 30716
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>gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosome 17, complete
             sequence
          Length = 193418

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gattgctgccaacccagcag 138
             ||||||||||||||||||||
Sbjct: 19112 gattgctgccaacccagcag 19131
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>gb|AC129320.5| Mus musculus BAC clone RP24-133J7 from chromosome 16, complete sequence
          Length = 183323

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    tgtgtgactttcatttggga 351
              ||||||||||||||||||||
Sbjct: 115905 tgtgtgactttcatttggga 115924
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>gb|AC164551.2| Mus musculus BAC clone RP23-365G9 from chromosome 16, complete sequence
          Length = 215805

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    tgtgtgactttcatttggga 351
              ||||||||||||||||||||
Sbjct: 122719 tgtgtgactttcatttggga 122700
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>emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, complete sequence
          Length = 177056

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   tgtttactttggtgaatgct 204
             ||||||||||||||||||||
Sbjct: 61876 tgtttactttggtgaatgct 61895
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>emb|BX538242.1|HSM806479 Homo sapiens genomic DNA; cDNA DKFZp686F08109 (from clone
            DKFZp686F08109)
          Length = 8691

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  tgaatgtaatgctatgatattatg 302
            ||||||||||||||||| ||||||
Sbjct: 5362 tgaatgtaatgctatgacattatg 5339
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      gtctgcccacccagctcgtt 64
               ||||||||||||||||||||
Sbjct: 6397839 gtctgcccacccagctcgtt 6397820
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>gb|DQ430310.1| Sorghum propinquum locus pSB1901 genomic sequence
          Length = 928

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 124 ctgccaacccagcagccagcacaaaagtactgaagc 159
           |||||||||||| ||||| |||  ||||||||||||
Sbjct: 920 ctgccaacccagaagccaccactgaagtactgaagc 885
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>gb|AC092171.4| Homo sapiens BAC clone RP11-1275H24 from 7, complete sequence
          Length = 85132

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ctgccaacccagcagccagc 143
             ||||||||||||||||||||
Sbjct: 37833 ctgccaacccagcagccagc 37814
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>gb|AC097632.2| Homo sapiens chromosome 3 clone RP11-90H15, complete sequence
          Length = 131796

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 279   tgaatgtaatgctatgatattatg 302
             ||||||||||||||||| ||||||
Sbjct: 50708 tgaatgtaatgctatgacattatg 50731
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>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22,
             complete sequence
          Length = 165445

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   tgtttactttggtgaatgct 204
             ||||||||||||||||||||
Sbjct: 10205 tgtttactttggtgaatgct 10186
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>gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, complete sequence
          Length = 173772

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   tgtgtgactttcatttggga 351
             ||||||||||||||||||||
Sbjct: 86316 tgtgtgactttcatttggga 86335
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>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence
          Length = 157468

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    tatggatcgtactcttatgt 318
              ||||||||||||||||||||
Sbjct: 150781 tatggatcgtactcttatgt 150762
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>gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome 17, complete sequence
          Length = 208318

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    gattgctgccaacccagcag 138
              ||||||||||||||||||||
Sbjct: 155986 gattgctgccaacccagcag 156005
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>emb|AL844562.3| Mouse DNA sequence from clone RP23-230F7 on chromosome 2, complete
              sequence
          Length = 208058

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 322    atgtgctctctgtgtgactttcat 345
              ||||| ||||||||||||||||||
Sbjct: 175638 atgtggtctctgtgtgactttcat 175661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,799,369
Number of Sequences: 3902068
Number of extensions: 2799369
Number of successful extensions: 54521
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54411
Number of HSP's gapped (non-prelim): 110
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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