ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdg14 |
|---|---|
| Clone Library Name | barley_pub |
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 63.9 bits (154), Expect = 2e-10 Identities = 26/45 (57%), Positives = 40/45 (88%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E GR+YVGNLP++ T+++L+ F+EAG+V +V+I+YD++TDRSRG Sbjct: 112 EGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRG 156 Score = 36.2 bits (82), Expect = 0.053 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P ++YV NL + T+ L AF++ ++IYD+ + RSRG Sbjct: 216 PHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRG 259
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 52.0 bits (123), Expect = 9e-07 Identities = 22/42 (52%), Positives = 32/42 (76%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +++VGNLP+ +A+L F AG+V+ V++IYDKIT RSRG Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRG 133 Score = 39.7 bits (91), Expect = 0.005 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R+YVGNL + L + FSE G V + ++IYD+ + RS+G Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKG 246
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 50.8 bits (120), Expect = 2e-06 Identities = 22/42 (52%), Positives = 32/42 (76%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +I+VGNLP++ +A L F AG+V+ V++IYDK+T RSRG Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRG 129 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R+YVGNL + L FSE G V D +++YD+ + RSRG Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRG 230
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 50.8 bits (120), Expect = 2e-06 Identities = 21/42 (50%), Positives = 32/42 (76%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +++VGNLP++ +A L F AG+V+ V++IYDK+T RSRG Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRG 129 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R+YVGNL + L FSE G+V D +++YD+ + RSRG Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRG 249
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 49.3 bits (116), Expect = 6e-06 Identities = 20/42 (47%), Positives = 32/42 (76%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +++VGNLP++ +A L F AG+V+ V++IYDK++ RSRG Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRG 130 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R+YVGNL + L FSE G+V D +++YD+ + RSRG Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRG 250
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/42 (47%), Positives = 31/42 (73%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +++VGNL + +A+L F AG+V+ V++IYDK+T RSRG Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRG 141 Score = 37.0 bits (84), Expect = 0.031 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R+YVGNL + L F+E G V + ++IYD+ + RS+G Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKG 299
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/54 (42%), Positives = 31/54 (57%) Frame = +1 Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P P ++ RIYVGN+P+ A L FSE G V +++YD+ T RSRG Sbjct: 219 PERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRG 272 Score = 44.7 bits (104), Expect = 1e-04 Identities = 19/45 (42%), Positives = 30/45 (66%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E +++VGNLPY + L F +AG V+ ++IY++ TD+SRG Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRG 178
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 47.8 bits (112), Expect = 2e-05 Identities = 22/54 (40%), Positives = 31/54 (57%) Frame = +1 Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P P + + R+YVGNLP+ L FSE G V + +++YD+ T RSRG Sbjct: 233 PERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRG 286 Score = 43.5 bits (101), Expect = 3e-04 Identities = 18/45 (40%), Positives = 30/45 (66%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E +++VGNL Y + L F +AG+V+ ++IY++ TD+SRG Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRG 192
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 47.0 bits (110), Expect = 3e-05 Identities = 21/42 (50%), Positives = 31/42 (73%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +I+VGNL ++ +A L F AG+V+ V++IYDK+T RSRG Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRG 129 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R+YVGNL + L FSE G V D +++YD+ + RSRG Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRG 236
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E +++VGNLPY + +L F AG V+ ++IY++ TDRSRG Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRG 97 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = +1 Query: 346 PRNRPALGQEPG-RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P P EP R+YVGNLP+ + L FSE G V +++ D+ T RSRG Sbjct: 137 PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRG 191
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E +++VGNLPY + L F +AG V+ ++IY++ TDRSRG Sbjct: 95 EDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRG 139 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/54 (40%), Positives = 30/54 (55%) Frame = +1 Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P P Q RIYVGN+P+ A L FSE G V ++++D+ + RSRG Sbjct: 180 PERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRG 233
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 45.1 bits (105), Expect = 1e-04 Identities = 23/41 (56%), Positives = 28/41 (68%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 IYVGNL Y + A+LTA F+E GSV VQ+ D+ T R RG Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRG 43
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PA+ + ++VGN+PY T +L FSE GSV +++YD+ T + +G Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKG 58
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PA+ + ++VGN+PY T +L FSE GSV +++YD+ T + +G Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKG 58
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = +1 Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +P R +P + +I+VG L T ++ F + G VDD +++DK T+R RG Sbjct: 96 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRG 151 Score = 32.3 bits (72), Expect = 0.77 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P +P ++++G L + T L F + G V + ++ D +T RSRG Sbjct: 13 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRG 62
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = +1 Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +P R +P + +I+VG L T ++ F + G VDD +++DK T+R RG Sbjct: 96 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRG 151 Score = 32.3 bits (72), Expect = 0.77 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P +P ++++G L + T L F + G V + ++ D +T RSRG Sbjct: 13 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRG 62
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = +1 Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +P R +P + +I+VG L T ++ F + G VDD +++DK T+R RG Sbjct: 96 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRG 151 Score = 32.3 bits (72), Expect = 0.77 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P +P ++++G L + T L F + G V + ++ D +T RSRG Sbjct: 13 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRG 62
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P PA+ + ++VGN+PY T +L FSE G V +++YD+ T + +G Sbjct: 5 PVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PA+ + ++VGN+PY T +L FSE G V +++YD+ T + +G Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PA+ + ++VGN+PY T +L FSE G V +++YD+ T + +G Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PA+ + ++VGN+PY T +L FSE G V +++YD+ T + +G Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/47 (42%), Positives = 30/47 (63%) Frame = +1 Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 G E G+++VG L ++ T L + FS+ G V D I+ DK T++SRG Sbjct: 6 GDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 52 Score = 35.8 bits (81), Expect = 0.069 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Frame = +1 Query: 343 PPRNRPALG---QEP-------GRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKIT 492 P R+RP G +EP +I+VG +P+ EL F+ G V +V +IYD Sbjct: 92 PERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEK 151 Query: 493 DRSRG 507 R RG Sbjct: 152 QRPRG 156
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (Poly(A)-binding protein II) (PABII) Length = 166 Score = 40.0 bits (92), Expect = 0.004 Identities = 18/41 (43%), Positives = 26/41 (63%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YVGN+ Y+ T EL + F+ GSV+ V I+ DK T +G Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKG 97
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 39.7 bits (91), Expect = 0.005 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 I++G LPY EL F + G ++ ++I+ DKIT +S+G Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKG 149
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 39.7 bits (91), Expect = 0.005 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSR 504 G+ R+YVGN+P EL E G+++ +++YDK + RSR Sbjct: 80 GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSR 125 Score = 29.6 bits (65), Expect = 5.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + P ++Y+GNL T T L FSE G V ++ T +S G Sbjct: 181 ESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNG 226
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +1 Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +P R +P + +I+VG L ++ F + G V+D +++DK T+R RG Sbjct: 97 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152 Score = 33.9 bits (76), Expect = 0.26 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +PG++++G L + + L FS+ G + + ++ D T RSRG Sbjct: 19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +1 Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +P R +P + +I+VG L ++ F + G V+D +++DK T+R RG Sbjct: 97 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152 Score = 33.9 bits (76), Expect = 0.26 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +PG++++G L + + L FS+ G + + ++ D T RSRG Sbjct: 19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 39.3 bits (90), Expect = 0.006 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 I+VG LPY T ++ FS+ G + ++ ++ DK T +S+G Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKG 78
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 38.9 bits (89), Expect = 0.008 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E GR++V NLPYT T +L FS+ G + ++ D +T + +G Sbjct: 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKG 444
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 38.9 bits (89), Expect = 0.008 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 IYVGN+ Y TA EL A F GSV+ V I+ DK + +G Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 209
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 38.9 bits (89), Expect = 0.008 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 IYVGN+ Y TA EL A F GSV+ V I+ DK + +G Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 213
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 38.9 bits (89), Expect = 0.008 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 IYVGN+ Y TA EL A F GSV+ V I+ DK + +G Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 213
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/45 (42%), Positives = 29/45 (64%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E G+++VG L ++ T L + FS+ G V D I+ DK T++SRG Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 52 Score = 37.0 bits (84), Expect = 0.031 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 9/64 (14%) Frame = +1 Query: 343 PPRNRPALGQEPG---------RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITD 495 P R RP G + G +I+VG +P+ EL F + G V +V +IYD Sbjct: 92 PERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQ 151 Query: 496 RSRG 507 R RG Sbjct: 152 RPRG 155
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/45 (42%), Positives = 29/45 (64%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E G+++VG L ++ T L + FS+ G V D I+ DK T++SRG Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 52 Score = 37.0 bits (84), Expect = 0.031 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 9/64 (14%) Frame = +1 Query: 343 PPRNRPALGQEPG---------RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITD 495 P R RP G + G +I+VG +P+ EL F + G V +V +IYD Sbjct: 92 PERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQ 151 Query: 496 RSRG 507 R RG Sbjct: 152 RPRG 155
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 38.5 bits (88), Expect = 0.011 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +1 Query: 346 PRNRPALGQEPGR----IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PR R + E R ++V L T+ EL F +AG V D QI+ DKI+ RS+G Sbjct: 225 PRERSSKLSEEERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKG 282
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 38.1 bits (87), Expect = 0.014 Identities = 14/41 (34%), Positives = 26/41 (63%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 I++G LPY T ++ FS+ G + ++ ++ DK T +S+G Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKG 78
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 38.1 bits (87), Expect = 0.014 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E GR+++ NLP+ + E+ A F G+V V I DK T S+G Sbjct: 312 ESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKG 356
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 38.1 bits (87), Expect = 0.014 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +EP I+VG L ++ L F G V ++IY++ TDRSRG Sbjct: 165 EEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRG 210
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 37.4 bits (85), Expect = 0.024 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + + G+++VG L + L FS+ G + +V ++ D+ T RSRG Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRG 48
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.4 bits (85), Expect = 0.024 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + + G+++VG L + L FS+ G + +V ++ D+ T RSRG Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRG 48
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 37.4 bits (85), Expect = 0.024 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV NLP T T +L F + GS+ I+ DK+T R RG Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 255
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 37.4 bits (85), Expect = 0.024 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV NLP T T +L F + GS+ I+ DK+T R RG Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 253
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 37.0 bits (84), Expect = 0.031 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +I+VG LPY T A L F G +++ +I D+ T +SRG Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRG 53
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 37.0 bits (84), Expect = 0.031 Identities = 20/42 (47%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + AEL FS+ G V D +II D+ T RSRG Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRG 48
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 37.0 bits (84), Expect = 0.031 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +I+VG LPY T A L F G +++ +I D+ T +SRG Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRG 74
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 37.0 bits (84), Expect = 0.031 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV NLP T T EL F + G++ I+ DK+T R RG Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRG 230
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.0 bits (84), Expect = 0.031 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + + G+++VG L + L FS+ G + +V ++ D+ T RSRG Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRG 48
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.0 bits (84), Expect = 0.031 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + + G+++VG L + L FS+ G + +V ++ D+ T RSRG Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRG 48
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.0 bits (84), Expect = 0.031 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + + G+++VG L + L FS+ G + +V ++ D+ T RSRG Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRG 48
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 36.6 bits (83), Expect = 0.041 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P R+YVG+L + T L F G ++ +Q++ D T RS+G Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKG 292
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 36.6 bits (83), Expect = 0.041 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P R+YVG+L + T L F G ++ +Q++ D T RS+G Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKG 292
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 36.6 bits (83), Expect = 0.041 Identities = 18/53 (33%), Positives = 31/53 (58%) Frame = +1 Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R++ L +E ++++G L + T L F + G+V D++I+ D T RSRG Sbjct: 149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201 Score = 33.5 bits (75), Expect = 0.34 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +1 Query: 379 GRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 G+I+VG + E FS+ G++ D Q++ DK T +SRG Sbjct: 243 GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRG 285
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 36.6 bits (83), Expect = 0.041 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PP + GQ+P I+VG +P EL F +AG + D++++ D +T +RG Sbjct: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRG 204
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 36.6 bits (83), Expect = 0.041 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PP + GQ+P I+VG +P EL F +AG + D++++ D +T +RG Sbjct: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRG 204
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 36.6 bits (83), Expect = 0.041 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PP + GQ+P I+VG +P EL F +AG + D++++ D +T +RG Sbjct: 57 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRG 114
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 36.2 bits (82), Expect = 0.053 Identities = 14/46 (30%), Positives = 29/46 (63%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +E GR+++ N+ Y + + + FS+ G++++V I D T +S+G Sbjct: 307 EETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKG 352
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 35.8 bits (81), Expect = 0.069 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV NLP T T EL F + G++ I+ DK+T + RG Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRG 213
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 35.8 bits (81), Expect = 0.069 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P R+YVG+L + T L F G +D++ ++ D T RS+G Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKG 305
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 35.8 bits (81), Expect = 0.069 Identities = 13/42 (30%), Positives = 27/42 (64%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R++V NLPY + ++L FS+ G ++++ + +D + S+G Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKG 343
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 35.8 bits (81), Expect = 0.069 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + E G+++VG L + L FS G + +V ++ D+ T RSRG Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRG 48
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 35.8 bits (81), Expect = 0.069 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + L AFS+ G + D +II D+ T RSRG Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRG 48
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 35.8 bits (81), Expect = 0.069 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +1 Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + E G+++VG L + L FS G + +V ++ D+ T RSRG Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRG 48
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 167
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 174
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 179
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T T EL FS+ G + +I+ D++T SRG Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 35.4 bits (80), Expect = 0.090 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +1 Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PP + G +PG ++VG +P EL F +AG + D++++ D ++ ++RG Sbjct: 150 PPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRG 207
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 35.0 bits (79), Expect = 0.12 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P R++V N+P+ F +L F + G V DV+II+++ Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE 188
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 35.0 bits (79), Expect = 0.12 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VGNLPY + + F + GS+ V+I+ DK+T +G Sbjct: 289 VFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKG 329
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 35.0 bits (79), Expect = 0.12 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Frame = +1 Query: 346 PRNRPALGQE----PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P+ +P+ E P R++V N+P+ F +L F + G + DV+II+++ Sbjct: 102 PQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 152
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 35.0 bits (79), Expect = 0.12 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G LP T +L F+ G V +V I+YD+ +SRG Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRG 138 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 E G+++VG L + T L+ F G + D ++ + + RSRG Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRG 49
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 35.0 bits (79), Expect = 0.12 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Frame = +1 Query: 346 PRNRPALGQE----PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P+ +P+ E P R++V N+P+ F +L F + G + DV+II+++ Sbjct: 101 PQTQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 151
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 34.7 bits (78), Expect = 0.15 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + L AFS+ G + D +II D+ T RSRG Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRG 50
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 34.7 bits (78), Expect = 0.15 Identities = 17/52 (32%), Positives = 30/52 (57%) Frame = +1 Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSR 504 +++ L + G IYV LP+ F EL+ F++ G + +V++ +K T SR Sbjct: 81 KDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSR 132
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 34.7 bits (78), Expect = 0.15 Identities = 19/42 (45%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + L AFS+ G V D +II D+ T RSRG Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRG 50
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 34.7 bits (78), Expect = 0.15 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG I+VG + + + EL+ FS+ G + +++IYDK G Sbjct: 194 PGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNG 237
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 34.7 bits (78), Expect = 0.15 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = +1 Query: 361 ALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 A G R +VG L + L AF++ G V D +II D+ T RSRG Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRG 50
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 34.7 bits (78), Expect = 0.15 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + P YVGNLP+ ++ A F + S+ V+++ DK TD+ +G Sbjct: 38 EPPYTAYVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKG 82
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 34.7 bits (78), Expect = 0.15 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + P YVGNLP+ ++ A F + S+ V+++ DK TD+ +G Sbjct: 38 EPPYTAYVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKG 82
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 34.7 bits (78), Expect = 0.15 Identities = 14/46 (30%), Positives = 27/46 (58%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 Q+ ++VG+L T ++ AAF+ G + D +++ D T +S+G Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKG 148
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 34.7 bits (78), Expect = 0.15 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +1 Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R R A PG IY+G++P + +L F++ G+V +++ K T S+G Sbjct: 31 RKRKANALTPGVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKG 83
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 34.3 bits (77), Expect = 0.20 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Frame = +1 Query: 346 PRNRPALGQE-----PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P N P G P RI+VG + + +L FS+ GSV +V+I+ D+ Sbjct: 17 PLNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR 68
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 34.3 bits (77), Expect = 0.20 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV NLP T T +L F + G + I+ DK+T + RG Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRG 238
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 34.3 bits (77), Expect = 0.20 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L Y T L A F + G++ DV ++ D T RSRG Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRG 73
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 346 PRNRPALGQE-PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P + P G P RI+VG + + ++L FS+ GSV +V+I+ D+ Sbjct: 21 PTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR 68
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 346 PRNRPALGQE-PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P + P G P RI+VG + + ++L FS+ GSV +V+I+ D+ Sbjct: 21 PTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR 68
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 34.3 bits (77), Expect = 0.20 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L + A L AF+ G V D ++I D+ T RSRG Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRG 77
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 33.9 bits (76), Expect = 0.26 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 361 ALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 A +E ++++G L + T +L FS+ G V D + D IT RSRG Sbjct: 91 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRG 139
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 33.9 bits (76), Expect = 0.26 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P R++V N+P+ F +L F + G + DV+II+++ Sbjct: 120 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 156
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 33.9 bits (76), Expect = 0.26 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VG+L T ++ AAF+ G + D +++ D T +S+G Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKG 148
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 33.5 bits (75), Expect = 0.34 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + G++++G L + L AF++ G + +V ++ D+ T RSRG Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRG 47
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 33.5 bits (75), Expect = 0.34 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 P RI+VG + T A+LT FS G+V +II D+ Sbjct: 32 PNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR 68
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 33.5 bits (75), Expect = 0.34 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VGN+PY + ++T F++ G V +++ D T +G Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKG 49
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 33.5 bits (75), Expect = 0.34 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +E ++++G L + T +L FS+ G V D + D IT RSRG Sbjct: 94 REEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRG 139
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 33.5 bits (75), Expect = 0.34 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +E ++++G L + T +L FS+ G V D + D IT RSRG Sbjct: 92 REEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRG 137
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 33.1 bits (74), Expect = 0.45 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 349 RNRPALGQ--EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + RP GQ PG +YVG+LP +L + F + G V +++ K T S+G Sbjct: 33 KKRPQTGQTLSPGVLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKG 87
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 33.1 bits (74), Expect = 0.45 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + +L FS+ G V D +II D+ + RSRG Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRG 48
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 33.1 bits (74), Expect = 0.45 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T + E+ FS+ G + +I+ D++T SRG Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRG 167
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 33.1 bits (74), Expect = 0.45 Identities = 12/41 (29%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VG+L T ++ +AF+ G + D +++ D T +S+G Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKG 156
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 33.1 bits (74), Expect = 0.45 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P + P +VGNL + T +L F E V ++++ D +T+RSRG Sbjct: 87 PIPSEPPFTAHVGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRG 134
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 33.1 bits (74), Expect = 0.45 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VGNLPY + L F + GS+ V+I+ + +T RG Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRG 327
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 33.1 bits (74), Expect = 0.45 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L Y T L A F + G++ DV ++ D T RSRG Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRG 66
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 33.1 bits (74), Expect = 0.45 Identities = 12/41 (29%), Positives = 25/41 (60%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VG+L T ++ +AF+ G + D +++ D T +S+G Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKG 139
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 33.1 bits (74), Expect = 0.45 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VGNLPY + L F + GS+ V+I+ + +T RG Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRG 333
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 32.7 bits (73), Expect = 0.59 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + L AF+ G V D ++I D+ T RSRG Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRG 50
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 32.7 bits (73), Expect = 0.59 Identities = 14/44 (31%), Positives = 26/44 (59%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG++++G L L A F + G + +V ++ D+ T++SRG Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRG 50
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 32.3 bits (72), Expect = 0.77 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +1 Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +NR R+YV + T LT F++ G+V +II DK T + RG Sbjct: 104 KNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +I+VG L T + +S+ G + D+ ++ D T RSRG Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRG 65
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 32.3 bits (72), Expect = 0.77 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 R +VG L + + L AF+ G + D ++I D+ T RSRG Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRG 50
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 32.3 bits (72), Expect = 0.77 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L Y T L F + G + DV ++ D T RSRG Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRG 59 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 RP G +++VG + +L F + G+V I+ DK T + RG Sbjct: 100 RPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRG 150
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 32.3 bits (72), Expect = 0.77 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG++++G L L A F + G + ++ ++ D+ T++SRG Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRG 50
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 32.3 bits (72), Expect = 0.77 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG IY+G++P +L FS+ G+V +++ K T S+G Sbjct: 40 PGVIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKG 83
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 32.3 bits (72), Expect = 0.77 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 RP + +++VG L +L FS+ G+V+ +II DK + + RG Sbjct: 90 RPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRG 140
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 32.3 bits (72), Expect = 0.77 Identities = 13/41 (31%), Positives = 26/41 (63%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +Y+G++PY T ++ S G V ++++++D T RS+G Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKG 60
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 32.3 bits (72), Expect = 0.77 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YVG+LP + L FS AG V +++ D IT RS G Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLG 44
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 32.0 bits (71), Expect = 1.0 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG++++G L L A F + G + ++ ++ D+ T++SRG Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRG 50
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YV LP T + E+ FS+ G + +I+ D+ T SRG Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRG 167
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 31.6 bits (70), Expect = 1.3 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++ G+++VG L + + +L F++ G V D I D T RSRG Sbjct: 65 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 110
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 31.6 bits (70), Expect = 1.3 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++ G+++VG L + + +L F++ G V D I D T RSRG Sbjct: 72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +++VG L + T EL F + G ++ + + D T RSRG Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRG 98 Score = 29.3 bits (64), Expect = 6.5 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = +1 Query: 379 GRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 G+I+VG L + E+ F + G++ +V++ +DK + +G Sbjct: 136 GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKG 178
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 31.2 bits (69), Expect = 1.7 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YVG+L + + A L FS GSV +++ D IT S G Sbjct: 39 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 79
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +1 Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 T +L FS+ G + DV I+YD+ + RSRG Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRG 160
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +1 Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 T +L FS+ G + DV I+YD+ + RSRG Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRG 160
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +1 Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 T +L FS+ G + DV I+YD+ + RSRG Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRG 160
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG++++G L L A F + G + +V +I D+ T +SRG Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRG 49
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +Y+ LP T T ++ FS G + + +++ D+ T SRG Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRG 148
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +Y+ LP T T ++ FS G + + +++ D+ T SRG Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRG 148
>PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like protein| Length = 124 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKIT 492 +YV NLP+ T+ E+ F + G++ ++I DK T Sbjct: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKAT 56
>NOP12_SCHPO (O13741) Nucleolar protein 12| Length = 438 Score = 30.8 bits (68), Expect = 2.2 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++VGNL + L F + GS+D V+I+ D T+ +G Sbjct: 272 VFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKG 312
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 I+VGNL Y T +LT FS+ G V II + R G Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHHRGMG 178
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 30.8 bits (68), Expect = 2.2 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 IY+GNL T ++ FSE G DV + D+ T S+G Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQG 73
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +E ++V N+PY T L FS+ GSV + DK T ++G Sbjct: 287 REDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKG 332
>POF_DROME (Q9W123) Protein painting of fourth (Zeste-interacting protein 16)| (Zip16 protein) Length = 495 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVD 462 +P +YVGN+P+ T + + A F+ A VD Sbjct: 213 DPCSLYVGNIPFNMTTSAIKAYFANAMRVD 242
>SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9| Length = 222 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 G+ GRIYVGNLP +L F + G + ++++ Sbjct: 11 GEGDGRIYVGNLPSDVREKDLEDLFYKYGRIREIEL 46
>SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9| Length = 221 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 G+ GRIYVGNLP +L F + G + ++++ Sbjct: 10 GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL 45
>SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pre-mRNA-splicing| factor SRp30C) Length = 221 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 G+ GRIYVGNLP +L F + G + ++++ Sbjct: 10 GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL 45
>YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in chromosome III| Length = 654 Score = 30.0 bits (66), Expect = 3.8 Identities = 10/34 (29%), Positives = 22/34 (64%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 +++GNLP ++ E+ AF + G ++ ++I+ K Sbjct: 301 VFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKK 334
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L + T L + F + G++ D ++ D T RSRG Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L + T L + F + G++ D ++ D T RSRG Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L + T L + F + G++ D ++ D T RSRG Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L + T L + F + G++ D ++ D T RSRG Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L + T L + F + G++ D ++ D T RSRG Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 30.0 bits (66), Expect = 3.8 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++Y+G L L AFS V + +++ +K+T RSRG Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRG 73
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 29.6 bits (65), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 T +L FS G + V ++YD+ T RSRG Sbjct: 129 TERDLREVFSRYGPLSGVNVVYDQRTGRSRG 159
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 29.6 bits (65), Expect = 5.0 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YVG L L AAF G + D+QI D T++ RG Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRG 48
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 29.6 bits (65), Expect = 5.0 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 +YVG L L AAF G + D+QI D T++ RG Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRG 48
>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1| Length = 827 Score = 29.6 bits (65), Expect = 5.0 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAG-SVDDVQII 477 + RI+V NLP T T AE FS G V DV++I Sbjct: 2 ESSSRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI 38
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 29.6 bits (65), Expect = 5.0 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +1 Query: 382 RIYVGNL-PYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 ++++G L PYT T L + + G V DV ++ D T RSRG Sbjct: 33 KLFIGGLAPYT-TEENLKLFYGQWGKVVDVVVMRDAATKRSRG 74
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSV 459 R LG + +I+V NLP+ T +L FS+ G V Sbjct: 506 RDRLGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHV 540
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 29.6 bits (65), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 T +L FS G + V ++YD+ T RSRG Sbjct: 131 TERDLREVFSRYGPLSGVNVVYDQRTGRSRG 161
>NOP12_CANGA (Q6FUS6) Nucleolar protein 12| Length = 396 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +1 Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PA + ++VGNL + L F GS++ V+I+ D T+ +G Sbjct: 221 PAPHDKQRSVFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKG 270
>PM14_DROME (Q9VRV7) Pre-mRNA branch site p14-like protein| Length = 121 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +1 Query: 349 RNRPALGQEPGRI-YVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 RN L E R+ YV NLPY T+ E+ F + G++ +++ Sbjct: 4 RNHIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRV 46
>YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4| Length = 237 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/56 (23%), Positives = 23/56 (41%) Frame = +1 Query: 337 YYPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSR 504 Y PP + +++GN+ + T E+ F G + I DK T + + Sbjct: 87 YVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQK 142
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 29.3 bits (64), Expect = 6.5 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQII 477 +I+VGNL TA E+ + FS+ G + + I+ Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIV 34
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P ++VG + E+ + F+ GSV +V+II D+ T S+G Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKG 81
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P ++VG + E+ + F+ GSV +V+II D+ T S+G Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKG 81
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P ++VG + E+ + F+ GSV +V+II D+ T S+G Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKG 81
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 PG +YV +LP ++ + FS+ G+V ++ K T S+G Sbjct: 44 PGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKG 87
>NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 476 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 R++VGNLP T E+ F + G +V I DK Sbjct: 80 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 114
>SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1| Length = 267 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 R G RIYVGNLP ++ F + G++ D+ + Sbjct: 8 RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 47
>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 471 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 R++VGNLP T E+ F + G +V I DK Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO| protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit) Length = 471 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 R++VGNLP T E+ F + G +V I DK Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>KSGA_XANCP (Q8PCE3) Dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) Length = 262 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 391 VGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK-ITDR 498 VGNLPY ++ L A AG+V D+ + K + DR Sbjct: 107 VGNLPYNISSPILFHALDHAGAVADMHFMLQKEVVDR 143
>SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1| Length = 247 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 R G RIYVGNLP ++ F + G++ D+ + Sbjct: 7 RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46
>SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1| Length = 247 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 R G RIYVGNLP ++ F + G++ D+ + Sbjct: 7 RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46
>SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing| factor SF2, P33 subunit) (Alternative splicing factor ASF-1) Length = 247 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 R G RIYVGNLP ++ F + G++ D+ + Sbjct: 7 RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +1 Query: 352 NRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 + P ++ ++++G L + T L F + G + D ++ D T RSRG Sbjct: 18 HEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRG 69
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSV 459 R +G + +I+V NLP+ T +L FS+ G V Sbjct: 515 RERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHV 549
>NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 473 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486 R++VGNLP T E+ F + G +V I DK Sbjct: 77 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 111
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 28.9 bits (63), Expect = 8.5 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +1 Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 I+VGN+ T ++ F + G + + ++YD+ T +G Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKG 106
>SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1| Length = 256 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474 R G RIYVGNLP ++ F + G++ D+ + Sbjct: 7 RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507 P ++VG + E+ F+ GSV +V+II D+ T S+G Sbjct: 39 PNTVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKG 81
>DAZ1_CAEEL (Q20870) DAZ protein 1| Length = 499 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQII 477 P RI+VG P + T EL F + +V DV+++ Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMV 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,032,916 Number of Sequences: 219361 Number of extensions: 537006 Number of successful extensions: 1956 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 1872 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1956 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
