ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdg14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor 64 2e-10
2ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro... 52 9e-07
3ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec... 51 2e-06
4ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec... 51 2e-06
5ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur... 49 6e-06
6ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur... 49 1e-05
7ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor 48 1e-05
8ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur... 48 2e-05
9ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur... 47 3e-05
10ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP) 47 4e-05
11ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur... 47 4e-05
12RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA 45 1e-04
13CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit... 44 2e-04
14CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit... 44 2e-04
15MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa... 43 4e-04
16MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash... 43 6e-04
17MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa... 43 6e-04
18CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit... 43 6e-04
19CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit... 42 0.001
20CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit... 42 0.001
21CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit... 42 0.001
22DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp... 41 0.002
23PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-bin... 40 0.004
24RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho... 40 0.005
25RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch... 40 0.005
26MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa... 39 0.006
27MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa... 39 0.006
28RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2 39 0.006
29RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin... 39 0.008
30PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-bi... 39 0.008
31PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-bi... 39 0.008
32PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-bi... 39 0.008
33DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp... 39 0.011
34DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp... 39 0.011
35RSD1_SCHPO (O13845) RNA-binding protein rsd1 39 0.011
36RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2 38 0.014
37MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote... 38 0.014
38NSR1_YEAST (P27476) Nuclear localization sequence-binding protei... 38 0.014
39CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine... 37 0.024
40CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine... 37 0.024
41SXL_DROSU (Q24668) Protein sex-lethal 37 0.024
42SXL_DROME (P19339) Protein sex-lethal 37 0.024
43RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS... 37 0.031
44GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10 37 0.031
45RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss... 37 0.031
46SXL_MUSDO (O17310) Sex-lethal homolog 37 0.031
47CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r... 37 0.031
48CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine... 37 0.031
49CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine... 37 0.031
50RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co... 37 0.041
51RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He... 37 0.041
52HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4... 37 0.041
53HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (... 37 0.041
54HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (... 37 0.041
55HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn... 37 0.041
56MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote... 36 0.053
57SXL_CHRRU (O97018) Sex-lethal homolog 36 0.069
58RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin... 36 0.069
59MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 36 0.069
60RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ... 36 0.069
61GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein 36 0.069
62RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ... 36 0.069
63ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 35 0.090
64ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo... 35 0.090
65ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha... 35 0.090
66ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha... 35 0.090
67ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB) 35 0.090
68ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2 35 0.090
69ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 35 0.090
70HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (... 35 0.090
71FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing ... 35 0.12
72RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p... 35 0.12
73A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1 35 0.12
74RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C... 35 0.12
75A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1 35 0.12
76GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A 35 0.15
77YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 i... 35 0.15
78GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 35 0.15
79YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i... 35 0.15
80GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7 35 0.15
81IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H ... 35 0.15
82IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H ... 35 0.15
83TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1) 35 0.15
84MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos... 35 0.15
85BOLL_MOUSE (Q924M5) Protein boule-like 34 0.20
86SXL_CERCA (O61374) Sex-lethal homolog (CCSXL) 34 0.20
87ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (... 34 0.20
88BOLL_MACFA (Q8WP23) Protein boule-like 34 0.20
89BOLL_HUMAN (Q8N9W6) Protein boule-like 34 0.20
90GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon... 34 0.20
91HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ... 34 0.26
92RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif pro... 34 0.26
93TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p... 34 0.26
94CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine... 33 0.34
95BOULE_DROME (Q24207) Protein boule 33 0.34
96CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip... 33 0.34
97HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ... 33 0.34
98HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h... 33 0.34
99MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos... 33 0.45
100GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro... 33 0.45
101ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P... 33 0.45
102TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein) 33 0.45
103SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 33 0.45
104RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro... 33 0.45
105RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F... 33 0.45
106TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein) 33 0.45
107RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p... 33 0.45
108GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2 33 0.59
109HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (... 33 0.59
110ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1 32 0.77
111GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu... 32 0.77
112ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ... 32 0.77
113HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hn... 32 0.77
114MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos... 32 0.77
115ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (... 32 0.77
116RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15 32 0.77
117PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi... 32 0.77
118HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (... 32 1.0
119ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC) 32 1.3
120ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ... 32 1.3
121ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ... 32 1.3
122SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl... 31 1.7
123PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 31 1.7
124TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran... 31 1.7
125TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr... 31 1.7
126TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr... 31 1.7
127RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa... 31 2.2
128ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E... 31 2.2
129ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR) 31 2.2
130PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like protein 31 2.2
131NOP12_SCHPO (O13741) Nucleolar protein 12 31 2.2
132HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34) 31 2.2
133IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SN... 31 2.2
134NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO... 30 2.9
135POF_DROME (Q9W123) Protein painting of fourth (Zeste-interacting... 30 2.9
136SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9 30 2.9
137SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9 30 2.9
138SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pr... 30 2.9
139YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in c... 30 3.8
140ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1 (He... 30 3.8
141ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1 (... 30 3.8
142ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (... 30 3.8
143ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1 (... 30 3.8
144ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1 (... 30 3.8
145RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre... 30 3.8
146TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha) 30 5.0
147PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 30 5.0
148PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 30 5.0
149MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing prote... 30 5.0
150RB97D_DROME (Q02926) Ribonucleoprotein RB97D 30 5.0
151MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2) 30 5.0
152TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha) 30 5.0
153NOP12_CANGA (Q6FUS6) Nucleolar protein 12 30 5.0
154PM14_DROME (Q9VRV7) Pre-mRNA branch site p14-like protein 29 6.5
155YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4 29 6.5
156RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif pro... 29 6.5
157DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso... 29 6.5
158DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso... 29 6.5
159DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso... 29 6.5
160MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos... 29 6.5
161NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding prot... 29 8.5
162SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1 29 8.5
163NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding pr... 29 8.5
164NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding pr... 29 8.5
165KSGA_XANCP (Q8PCE3) Dimethyladenosine transferase (EC 2.1.1.-) (... 29 8.5
166SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1 29 8.5
167SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1 29 8.5
168SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pr... 29 8.5
169RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h... 29 8.5
170MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156) 29 8.5
171NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding pr... 29 8.5
172SGN1_YEAST (P40561) RNA-binding protein SGN1 29 8.5
173SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1 29 8.5
174DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso... 29 8.5
175DAZ1_CAEEL (Q20870) DAZ protein 1 29 8.5

>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 26/45 (57%), Positives = 40/45 (88%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E GR+YVGNLP++ T+++L+  F+EAG+V +V+I+YD++TDRSRG
Sbjct: 112 EGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRG 156



 Score = 36.2 bits (82), Expect = 0.053
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P ++YV NL +  T+  L  AF++       ++IYD+ + RSRG
Sbjct: 216 PHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRG 259



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>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +++VGNLP+   +A+L   F  AG+V+ V++IYDKIT RSRG
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRG 133



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R+YVGNL +      L + FSE G V + ++IYD+ + RS+G
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKG 246



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>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +I+VGNLP++  +A L   F  AG+V+ V++IYDK+T RSRG
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRG 129



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R+YVGNL +      L   FSE G V D +++YD+ + RSRG
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRG 230



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>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 32/42 (76%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +++VGNLP++  +A L   F  AG+V+ V++IYDK+T RSRG
Sbjct: 88  KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRG 129



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R+YVGNL +      L   FSE G+V D +++YD+ + RSRG
Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRG 249



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>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 20/42 (47%), Positives = 32/42 (76%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +++VGNLP++  +A L   F  AG+V+ V++IYDK++ RSRG
Sbjct: 89  KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRG 130



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R+YVGNL +      L   FSE G+V D +++YD+ + RSRG
Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRG 250



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>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 31/42 (73%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +++VGNL +   +A+L   F  AG+V+ V++IYDK+T RSRG
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRG 141



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R+YVGNL +      L   F+E G V + ++IYD+ + RS+G
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKG 299



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>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 23/54 (42%), Positives = 31/54 (57%)
 Frame = +1

Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P   P   ++  RIYVGN+P+    A L   FSE G V   +++YD+ T RSRG
Sbjct: 219 PERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRG 272



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E  +++VGNLPY   +  L   F +AG V+  ++IY++ TD+SRG
Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRG 178



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>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = +1

Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P   P + +   R+YVGNLP+      L   FSE G V + +++YD+ T RSRG
Sbjct: 233 PERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRG 286



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 18/45 (40%), Positives = 30/45 (66%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E  +++VGNL Y   +  L   F +AG+V+  ++IY++ TD+SRG
Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRG 192



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>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +I+VGNL ++  +A L   F  AG+V+ V++IYDK+T RSRG
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRG 129



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R+YVGNL +      L   FSE G V D +++YD+ + RSRG
Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRG 236



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>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E  +++VGNLPY   + +L   F  AG V+  ++IY++ TDRSRG
Sbjct: 53  EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRG 97



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 346 PRNRPALGQEPG-RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P   P    EP  R+YVGNLP+    + L   FSE G V   +++ D+ T RSRG
Sbjct: 137 PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRG 191



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>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E  +++VGNLPY   +  L   F +AG V+  ++IY++ TDRSRG
Sbjct: 95  EDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRG 139



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = +1

Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P   P   Q   RIYVGN+P+    A L   FSE G V   ++++D+ + RSRG
Sbjct: 180 PERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRG 233



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>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA|
          Length = 101

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           IYVGNL Y  + A+LTA F+E GSV  VQ+  D+ T R RG
Sbjct: 3   IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRG 43



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>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PA+ +    ++VGN+PY  T  +L   FSE GSV   +++YD+ T + +G
Sbjct: 9   PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKG 58



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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PA+ +    ++VGN+PY  T  +L   FSE GSV   +++YD+ T + +G
Sbjct: 9   PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKG 58



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>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +1

Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +P R +P +     +I+VG L    T  ++   F + G VDD  +++DK T+R RG
Sbjct: 96  FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRG 151



 Score = 32.3 bits (72), Expect = 0.77
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P    +P ++++G L +  T   L   F + G V +  ++ D +T RSRG
Sbjct: 13  PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRG 62



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>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +1

Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +P R +P +     +I+VG L    T  ++   F + G VDD  +++DK T+R RG
Sbjct: 96  FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRG 151



 Score = 32.3 bits (72), Expect = 0.77
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P    +P ++++G L +  T   L   F + G V +  ++ D +T RSRG
Sbjct: 13  PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRG 62



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>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +1

Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +P R +P +     +I+VG L    T  ++   F + G VDD  +++DK T+R RG
Sbjct: 96  FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRG 151



 Score = 32.3 bits (72), Expect = 0.77
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P    +P ++++G L +  T   L   F + G V +  ++ D +T RSRG
Sbjct: 13  PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRG 62



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>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +1

Query: 346 PRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P   PA+ +    ++VGN+PY  T  +L   FSE G V   +++YD+ T + +G
Sbjct: 5   PVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58



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>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PA+ +    ++VGN+PY  T  +L   FSE G V   +++YD+ T + +G
Sbjct: 9   PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58



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>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PA+ +    ++VGN+PY  T  +L   FSE G V   +++YD+ T + +G
Sbjct: 9   PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58



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>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PA+ +    ++VGN+PY  T  +L   FSE G V   +++YD+ T + +G
Sbjct: 9   PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG 58



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>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/47 (42%), Positives = 30/47 (63%)
 Frame = +1

Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           G E G+++VG L ++ T   L + FS+ G V D  I+ DK T++SRG
Sbjct: 6   GDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 52



 Score = 35.8 bits (81), Expect = 0.069
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
 Frame = +1

Query: 343 PPRNRPALG---QEP-------GRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKIT 492
           P R+RP  G   +EP        +I+VG +P+     EL   F+  G V +V +IYD   
Sbjct: 92  PERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEK 151

Query: 493 DRSRG 507
            R RG
Sbjct: 152 QRPRG 156



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>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (Poly(A)-binding protein II) (PABII)
          Length = 166

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YVGN+ Y+ T  EL + F+  GSV+ V I+ DK T   +G
Sbjct: 57  VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKG 97



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>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog|
          Length = 300

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           I++G LPY     EL   F + G ++ ++I+ DKIT +S+G
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKG 149



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>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSR 504
           G+   R+YVGN+P      EL     E G+++  +++YDK + RSR
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSR 125



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           + P ++Y+GNL  T T   L   FSE G V   ++     T +S G
Sbjct: 181 ESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNG 226



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>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +1

Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +P R +P +     +I+VG L       ++   F + G V+D  +++DK T+R RG
Sbjct: 97  FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +PG++++G L +  +   L   FS+ G + +  ++ D  T RSRG
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63



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>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +1

Query: 340 YPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +P R +P +     +I+VG L       ++   F + G V+D  +++DK T+R RG
Sbjct: 97  FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +PG++++G L +  +   L   FS+ G + +  ++ D  T RSRG
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63



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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           I+VG LPY  T  ++   FS+ G + ++ ++ DK T +S+G
Sbjct: 38  IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKG 78



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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E GR++V NLPYT T  +L   FS+ G + ++    D +T + +G
Sbjct: 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKG 444



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>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 301

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           IYVGN+ Y  TA EL A F   GSV+ V I+ DK +   +G
Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 209



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>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           IYVGN+ Y  TA EL A F   GSV+ V I+ DK +   +G
Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 213



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>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA-binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           IYVGN+ Y  TA EL A F   GSV+ V I+ DK +   +G
Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 213



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>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E G+++VG L ++ T   L + FS+ G V D  I+ DK T++SRG
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 52



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
 Frame = +1

Query: 343 PPRNRPALGQEPG---------RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITD 495
           P R RP  G + G         +I+VG +P+     EL   F + G V +V +IYD    
Sbjct: 92  PERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQ 151

Query: 496 RSRG 507
           R RG
Sbjct: 152 RPRG 155



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>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E G+++VG L ++ T   L + FS+ G V D  I+ DK T++SRG
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 52



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
 Frame = +1

Query: 343 PPRNRPALGQEPG---------RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITD 495
           P R RP  G + G         +I+VG +P+     EL   F + G V +V +IYD    
Sbjct: 92  PERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQ 151

Query: 496 RSRG 507
           R RG
Sbjct: 152 RPRG 155



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>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = +1

Query: 346 PRNRPALGQEPGR----IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PR R +   E  R    ++V  L    T+ EL   F +AG V D QI+ DKI+ RS+G
Sbjct: 225 PRERSSKLSEEERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKG 282



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>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           I++G LPY  T  ++   FS+ G + ++ ++ DK T +S+G
Sbjct: 38  IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKG 78



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>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1|
          Length = 858

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E GR+++ NLP+  +  E+ A F   G+V  V I  DK T  S+G
Sbjct: 312 ESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKG 356



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>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +EP  I+VG L ++     L   F   G V   ++IY++ TDRSRG
Sbjct: 165 EEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRG 210



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>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  + G+++VG L +      L   FS+ G + +V ++ D+ T RSRG
Sbjct: 1   MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRG 48



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>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  + G+++VG L +      L   FS+ G + +V ++ D+ T RSRG
Sbjct: 1   MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRG 48



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>SXL_DROSU (Q24668) Protein sex-lethal|
          Length = 354

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV NLP T T  +L   F + GS+    I+ DK+T R RG
Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 255



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>SXL_DROME (P19339) Protein sex-lethal|
          Length = 354

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV NLP T T  +L   F + GS+    I+ DK+T R RG
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 253



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>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +I+VG LPY  T A L   F   G +++  +I D+ T +SRG
Sbjct: 12  KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRG 53



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>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +    AEL   FS+ G V D +II D+ T RSRG
Sbjct: 7   RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRG 48



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>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +I+VG LPY  T A L   F   G +++  +I D+ T +SRG
Sbjct: 33  KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRG 74



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>SXL_MUSDO (O17310) Sex-lethal homolog|
          Length = 324

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV NLP T T  EL   F + G++    I+ DK+T R RG
Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRG 230



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>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  + G+++VG L +      L   FS+ G + +V ++ D+ T RSRG
Sbjct: 1   MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRG 48



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>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  + G+++VG L +      L   FS+ G + +V ++ D+ T RSRG
Sbjct: 1   MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRG 48



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>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  + G+++VG L +      L   FS+ G + +V ++ D+ T RSRG
Sbjct: 1   MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRG 48



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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P R+YVG+L +  T   L   F   G ++ +Q++ D  T RS+G
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKG 292



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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P R+YVG+L +  T   L   F   G ++ +Q++ D  T RS+G
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKG 292



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>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +1

Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R++  L +E  ++++G L +  T   L   F + G+V D++I+ D  T RSRG
Sbjct: 149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 379 GRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           G+I+VG +       E    FS+ G++ D Q++ DK T +SRG
Sbjct: 243 GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRG 285



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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PP +    GQ+P     I+VG +P      EL   F +AG + D++++ D +T  +RG
Sbjct: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRG 204



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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PP +    GQ+P     I+VG +P      EL   F +AG + D++++ D +T  +RG
Sbjct: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRG 204



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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PP +    GQ+P     I+VG +P      EL   F +AG + D++++ D +T  +RG
Sbjct: 57  PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRG 114



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>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 14/46 (30%), Positives = 29/46 (63%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +E GR+++ N+ Y  +  +  + FS+ G++++V I  D  T +S+G
Sbjct: 307 EETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKG 352



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>SXL_CHRRU (O97018) Sex-lethal homolog|
          Length = 307

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV NLP T T  EL   F + G++    I+ DK+T + RG
Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRG 213



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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P R+YVG+L +  T   L   F   G +D++ ++ D  T RS+G
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKG 305



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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 13/42 (30%), Positives = 27/42 (64%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R++V NLPY  + ++L   FS+ G ++++ + +D  +  S+G
Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKG 343



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>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  E G+++VG L +      L   FS  G + +V ++ D+ T RSRG
Sbjct: 1   MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRG 48



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>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +      L  AFS+ G + D +II D+ T RSRG
Sbjct: 7   RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRG 48



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>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +1

Query: 364 LGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +  E G+++VG L +      L   FS  G + +V ++ D+ T RSRG
Sbjct: 1   MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRG 48



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>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167



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>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 167



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>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 174



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>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 179



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>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167



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>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167



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>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T T  EL   FS+ G +   +I+ D++T  SRG
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRG 167



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>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +1

Query: 343 PPRNRPALGQEPG---RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PP +    G +PG    ++VG +P      EL   F +AG + D++++ D ++ ++RG
Sbjct: 150 PPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRG 207



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>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X|
           protein 1)
          Length = 415

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P R++V N+P+ F   +L   F + G V DV+II+++
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE 188



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>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VGNLPY    + +   F + GS+  V+I+ DK+T   +G
Sbjct: 289 VFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKG 329



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>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1|
          Length = 397

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +1

Query: 346 PRNRPALGQE----PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P+ +P+   E    P R++V N+P+ F   +L   F + G + DV+II+++
Sbjct: 102 PQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 152



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>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G LP   T  +L   F+  G V +V I+YD+   +SRG
Sbjct: 97  KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRG 138



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           E G+++VG L +  T   L+  F   G + D  ++ +  + RSRG
Sbjct: 5   ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRG 49



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>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1|
          Length = 396

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +1

Query: 346 PRNRPALGQE----PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P+ +P+   E    P R++V N+P+ F   +L   F + G + DV+II+++
Sbjct: 101 PQTQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 151



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>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +      L  AFS+ G + D +II D+ T RSRG
Sbjct: 9   RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRG 50



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>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 220

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +1

Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSR 504
           +++  L +  G IYV  LP+ F   EL+  F++ G + +V++  +K T  SR
Sbjct: 81  KDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSR 132



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>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +      L  AFS+ G V D +II D+ T RSRG
Sbjct: 9   RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRG 50



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>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG I+VG +  + +  EL+  FS+ G +  +++IYDK      G
Sbjct: 194 PGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNG 237



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>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +1

Query: 361 ALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           A G    R +VG L +      L  AF++ G V D +II D+ T RSRG
Sbjct: 2   ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRG 50



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>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein
           homolog)
          Length = 247

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           + P   YVGNLP+     ++ A F +  S+  V+++ DK TD+ +G
Sbjct: 38  EPPYTAYVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKG 82



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>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein)
          Length = 247

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           + P   YVGNLP+     ++ A F +  S+  V+++ DK TD+ +G
Sbjct: 38  EPPYTAYVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKG 82



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>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           Q+   ++VG+L    T  ++ AAF+  G + D +++ D  T +S+G
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKG 148



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>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 278

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R R A    PG IY+G++P +    +L   F++ G+V  +++   K T  S+G
Sbjct: 31  RKRKANALTPGVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKG 83



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>BOLL_MOUSE (Q924M5) Protein boule-like|
          Length = 281

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +1

Query: 346 PRNRPALGQE-----PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P N P  G       P RI+VG + +     +L   FS+ GSV +V+I+ D+
Sbjct: 17  PLNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR 68



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>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)|
          Length = 348

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV NLP T T  +L   F + G +    I+ DK+T + RG
Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRG 238



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>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L Y  T   L A F + G++ DV ++ D  T RSRG
Sbjct: 32  KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRG 73



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>BOLL_MACFA (Q8WP23) Protein boule-like|
          Length = 283

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 346 PRNRPALGQE-PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P + P  G   P RI+VG + +    ++L   FS+ GSV +V+I+ D+
Sbjct: 21  PTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR 68



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>BOLL_HUMAN (Q8N9W6) Protein boule-like|
          Length = 283

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 346 PRNRPALGQE-PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P + P  G   P RI+VG + +    ++L   FS+ GSV +V+I+ D+
Sbjct: 21  PTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR 68



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>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L +    A L  AF+  G V D ++I D+ T RSRG
Sbjct: 36  KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRG 77



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>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +1

Query: 361 ALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           A  +E  ++++G L +  T  +L   FS+ G V D  +  D IT RSRG
Sbjct: 91  AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRG 139



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>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)|
           (Hexaribonucleotide-binding protein 2) (Repressor of
           tamoxifen transcriptional activity)
          Length = 390

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P R++V N+P+ F   +L   F + G + DV+II+++
Sbjct: 120 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 156



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>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VG+L    T  ++ AAF+  G + D +++ D  T +S+G
Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKG 148



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>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           + G++++G L +      L  AF++ G + +V ++ D+ T RSRG
Sbjct: 3   DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRG 47



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>BOULE_DROME (Q24207) Protein boule|
          Length = 228

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           P RI+VG +    T A+LT  FS  G+V   +II D+
Sbjct: 32  PNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR 68



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>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VGN+PY  +  ++T  F++ G V   +++ D  T   +G
Sbjct: 9   VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKG 49



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>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +E  ++++G L +  T  +L   FS+ G V D  +  D IT RSRG
Sbjct: 94  REEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRG 139



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>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 353

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +E  ++++G L +  T  +L   FS+ G V D  +  D IT RSRG
Sbjct: 92  REEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRG 137



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>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +1

Query: 349 RNRPALGQ--EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           + RP  GQ   PG +YVG+LP      +L + F + G V  +++   K T  S+G
Sbjct: 33  KKRPQTGQTLSPGVLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKG 87



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>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +     +L   FS+ G V D +II D+ + RSRG
Sbjct: 7   RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRG 48



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>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T +  E+   FS+ G +   +I+ D++T  SRG
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRG 167



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>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VG+L    T  ++ +AF+  G + D +++ D  T +S+G
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKG 156



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>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3|
          Length = 388

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P   + P   +VGNL +  T  +L   F E   V  ++++ D +T+RSRG
Sbjct: 87  PIPSEPPFTAHVGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRG 134



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>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VGNLPY    + L   F + GS+  V+I+ + +T   RG
Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRG 327



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>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L Y  T   L A F + G++ DV ++ D  T RSRG
Sbjct: 25  KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRG 66



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>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VG+L    T  ++ +AF+  G + D +++ D  T +S+G
Sbjct: 99  VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKG 139



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>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VGNLPY    + L   F + GS+  V+I+ + +T   RG
Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRG 333



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>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +      L  AF+  G V D ++I D+ T RSRG
Sbjct: 9   RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRG 50



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>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome) (Glycoprotein
           p43)
          Length = 391

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG++++G L        L A F + G + +V ++ D+ T++SRG
Sbjct: 7   PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRG 50



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>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 349 RNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +NR        R+YV  +    T   LT  F++ G+V   +II DK T + RG
Sbjct: 104 KNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +I+VG L    T   +   +S+ G + D+ ++ D  T RSRG
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRG 65



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>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           R +VG L +  +   L  AF+  G + D ++I D+ T RSRG
Sbjct: 9   RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRG 50



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>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L Y  T   L   F + G + DV ++ D  T RSRG
Sbjct: 18  KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRG 59



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           RP  G    +++VG +       +L   F + G+V    I+ DK T + RG
Sbjct: 100 RPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRG 150



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>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG++++G L        L A F + G + ++ ++ D+ T++SRG
Sbjct: 7   PGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRG 50



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>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG IY+G++P      +L   FS+ G+V  +++   K T  S+G
Sbjct: 40  PGVIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKG 83



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>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           RP    +  +++VG L       +L   FS+ G+V+  +II DK + + RG
Sbjct: 90  RPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRG 140



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>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +Y+G++PY  T  ++    S  G V ++++++D  T RS+G
Sbjct: 20  VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKG 60



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>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YVG+LP     + L   FS AG V  +++  D IT RS G
Sbjct: 4   LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLG 44



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>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG++++G L        L A F + G + ++ ++ D+ T++SRG
Sbjct: 7   PGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRG 50



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>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YV  LP T +  E+   FS+ G +   +I+ D+ T  SRG
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRG 167



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>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++ G+++VG L +  +  +L   F++ G V D  I  D  T RSRG
Sbjct: 65  EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 110



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>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++ G+++VG L +  +  +L   F++ G V D  I  D  T RSRG
Sbjct: 72  EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117



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>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +++VG L +  T  EL   F + G ++ + +  D  T RSRG
Sbjct: 57  KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRG 98



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +1

Query: 379 GRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           G+I+VG L    +  E+   F + G++ +V++ +DK   + +G
Sbjct: 136 GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKG 178



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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YVG+L  + + A L   FS  GSV  +++  D IT  S G
Sbjct: 39  LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 79



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>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           T  +L   FS+ G + DV I+YD+ + RSRG
Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRG 160



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>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           T  +L   FS+ G + DV I+YD+ + RSRG
Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRG 160



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>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           T  +L   FS+ G + DV I+YD+ + RSRG
Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRG 160



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>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG++++G L        L A F + G + +V +I D+ T +SRG
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRG 49



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>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +Y+  LP T T  ++   FS  G + + +++ D+ T  SRG
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRG 148



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>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +Y+  LP T T  ++   FS  G + + +++ D+ T  SRG
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRG 148



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>PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like protein|
          Length = 124

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKIT 492
           +YV NLP+  T+ E+   F + G++  ++I  DK T
Sbjct: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKAT 56



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>NOP12_SCHPO (O13741) Nucleolar protein 12|
          Length = 438

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++VGNL +      L   F + GS+D V+I+ D  T+  +G
Sbjct: 272 VFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKG 312



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>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)|
          Length = 429

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           I+VGNL Y  T  +LT  FS+ G V    II  +   R  G
Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHHRGMG 178



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>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)|
           (Increased sodium tolerance protein 3)
          Length = 148

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           IY+GNL    T  ++   FSE G   DV +  D+ T  S+G
Sbjct: 33  IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQG 73



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>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +E   ++V N+PY  T   L   FS+ GSV     + DK T  ++G
Sbjct: 287 REDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKG 332



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>POF_DROME (Q9W123) Protein painting of fourth (Zeste-interacting protein 16)|
           (Zip16 protein)
          Length = 495

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 373 EPGRIYVGNLPYTFTAAELTAAFSEAGSVD 462
           +P  +YVGN+P+  T + + A F+ A  VD
Sbjct: 213 DPCSLYVGNIPFNMTTSAIKAYFANAMRVD 242



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>SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9|
          Length = 222

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           G+  GRIYVGNLP      +L   F + G + ++++
Sbjct: 11  GEGDGRIYVGNLPSDVREKDLEDLFYKYGRIREIEL 46



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>SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9|
          Length = 221

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           G+  GRIYVGNLP      +L   F + G + ++++
Sbjct: 10  GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL 45



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>SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pre-mRNA-splicing|
           factor SRp30C)
          Length = 221

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 367 GQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           G+  GRIYVGNLP      +L   F + G + ++++
Sbjct: 10  GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL 45



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>YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in chromosome III|
          Length = 654

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           +++GNLP ++   E+  AF + G ++ ++I+  K
Sbjct: 301 VFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKK 334



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>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (HDP)
          Length = 319

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L +  T   L + F + G++ D  ++ D  T RSRG
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55



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>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1) (HDP-1)
           (Topoisomerase-inhibitor suppressed)
          Length = 319

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L +  T   L + F + G++ D  ++ D  T RSRG
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55



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>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L +  T   L + F + G++ D  ++ D  T RSRG
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55



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>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L +  T   L + F + G++ D  ++ D  T RSRG
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55



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>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (Unwinding protein 1)
           (UP1) (Fragment)
          Length = 195

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L +  T   L + F + G++ D  ++ D  T RSRG
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRG 55



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>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++Y+G L        L  AFS    V + +++ +K+T RSRG
Sbjct: 32  KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRG 73



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>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           T  +L   FS  G +  V ++YD+ T RSRG
Sbjct: 129 TERDLREVFSRYGPLSGVNVVYDQRTGRSRG 159



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>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YVG L        L AAF   G + D+QI  D  T++ RG
Sbjct: 8   LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRG 48



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>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           +YVG L        L AAF   G + D+QI  D  T++ RG
Sbjct: 8   LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRG 48



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>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1|
          Length = 827

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 370 QEPGRIYVGNLPYTFTAAELTAAFSEAG-SVDDVQII 477
           +   RI+V NLP T T AE    FS  G  V DV++I
Sbjct: 2   ESSSRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI 38



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>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 382 RIYVGNL-PYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           ++++G L PYT T   L   + + G V DV ++ D  T RSRG
Sbjct: 33  KLFIGGLAPYT-TEENLKLFYGQWGKVVDVVVMRDAATKRSRG 74



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>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)|
          Length = 591

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSV 459
           R  LG +  +I+V NLP+  T  +L   FS+ G V
Sbjct: 506 RDRLGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHV 540



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>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 415 TAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           T  +L   FS  G +  V ++YD+ T RSRG
Sbjct: 131 TERDLREVFSRYGPLSGVNVVYDQRTGRSRG 161



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>NOP12_CANGA (Q6FUS6) Nucleolar protein 12|
          Length = 396

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 358 PALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PA   +   ++VGNL +      L   F   GS++ V+I+ D  T+  +G
Sbjct: 221 PAPHDKQRSVFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKG 270



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>PM14_DROME (Q9VRV7) Pre-mRNA branch site p14-like protein|
          Length = 121

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 349 RNRPALGQEPGRI-YVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           RN   L  E  R+ YV NLPY  T+ E+   F + G++  +++
Sbjct: 4   RNHIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRV 46



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>YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4|
          Length = 237

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +1

Query: 337 YYPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSR 504
           Y PP        +   +++GN+ +  T  E+   F   G +    I  DK T + +
Sbjct: 87  YVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQK 142



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>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)|
          Length = 419

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQII 477
           +I+VGNL    TA E+ + FS+ G + +  I+
Sbjct: 3   KIFVGNLSPNTTAEEIRSLFSQYGKISECDIV 34



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>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P  ++VG +       E+ + F+  GSV +V+II D+ T  S+G
Sbjct: 39  PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKG 81



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>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P  ++VG +       E+ + F+  GSV +V+II D+ T  S+G
Sbjct: 39  PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKG 81



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>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P  ++VG +       E+ + F+  GSV +V+II D+ T  S+G
Sbjct: 39  PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKG 81



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>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           PG +YV +LP      ++ + FS+ G+V   ++   K T  S+G
Sbjct: 44  PGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKG 87



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>NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding protein (NonO|
           protein)
          Length = 476

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           R++VGNLP   T  E+   F + G   +V I  DK
Sbjct: 80  RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 114



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>SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1|
          Length = 267

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           R   G    RIYVGNLP      ++   F + G++ D+ +
Sbjct: 8   RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 47



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>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO|
           protein)
          Length = 471

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           R++VGNLP   T  E+   F + G   +V I  DK
Sbjct: 75  RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109



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>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO|
           protein) (54 kDa nuclear RNA- and DNA-binding protein)
           (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55)
           (DNA-binding p52/p100 complex, 52 kDa subunit)
          Length = 471

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           R++VGNLP   T  E+   F + G   +V I  DK
Sbjct: 75  RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109



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>KSGA_XANCP (Q8PCE3) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 262

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 391 VGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK-ITDR 498
           VGNLPY  ++  L  A   AG+V D+  +  K + DR
Sbjct: 107 VGNLPYNISSPILFHALDHAGAVADMHFMLQKEVVDR 143



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>SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1|
          Length = 247

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           R   G    RIYVGNLP      ++   F + G++ D+ +
Sbjct: 7   RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46



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>SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1|
          Length = 247

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           R   G    RIYVGNLP      ++   F + G++ D+ +
Sbjct: 7   RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46



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>SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing|
           factor SF2, P33 subunit) (Alternative splicing factor
           ASF-1)
          Length = 247

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           R   G    RIYVGNLP      ++   F + G++ D+ +
Sbjct: 7   RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46



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>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2|
           (hnRNP A3(B))
          Length = 385

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 352 NRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           + P   ++  ++++G L +  T   L   F + G + D  ++ D  T RSRG
Sbjct: 18  HEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRG 69



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>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)|
          Length = 600

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSV 459
           R  +G +  +I+V NLP+  T  +L   FS+ G V
Sbjct: 515 RERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHV 549



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>NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding protein (NonO|
           protein)
          Length = 473

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 382 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDK 486
           R++VGNLP   T  E+   F + G   +V I  DK
Sbjct: 77  RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 111



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>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 385 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           I+VGN+    T  ++   F + G +  + ++YD+ T   +G
Sbjct: 66  IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKG 106



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>SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1|
          Length = 256

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 355 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQI 474
           R   G    RIYVGNLP      ++   F + G++ D+ +
Sbjct: 7   RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDL 46



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>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 507
           P  ++VG +       E+   F+  GSV +V+II D+ T  S+G
Sbjct: 39  PNTVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKG 81



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>DAZ1_CAEEL (Q20870) DAZ protein 1|
          Length = 499

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 376 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQII 477
           P RI+VG  P + T  EL   F +  +V DV+++
Sbjct: 66  PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMV 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,032,916
Number of Sequences: 219361
Number of extensions: 537006
Number of successful extensions: 1956
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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