ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdg12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119020 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118961 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118960 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118901 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118900 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 118841 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118840 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 118781 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118780 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 118721 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118720 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 118661 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118660 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 118601 Query: 422 caa 424 ||| Sbjct: 118600 caa 118598 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96195 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96196 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96255 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96256 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 96315 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96316 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 96375 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96376 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 96435 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96436 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 96495 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96496 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 96555 Query: 422 caa 424 ||| Sbjct: 96556 caa 96558
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119020 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118961 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118960 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118901 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118900 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 118841 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118840 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 118781 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118780 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 118721 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118720 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 118661 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118660 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 118601 Query: 422 caa 424 ||| Sbjct: 118600 caa 118598 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96195 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96196 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96255 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96256 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 96315 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96316 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 96375 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96376 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 96435 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96436 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 96495 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96496 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 96555 Query: 422 caa 424 ||| Sbjct: 96556 caa 96558
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118910 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118850 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118849 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 118790 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118789 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 118730 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118729 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 118670 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118669 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 118610 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118609 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 118550 Query: 422 caa 424 ||| Sbjct: 118549 caa 118547 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96081 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96140 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96141 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96200 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96201 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 96260 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96261 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 96320 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96321 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 96380 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96381 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 96440 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96441 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 96500 Query: 422 caa 424 ||| Sbjct: 96501 caa 96503
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508714 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 31508773 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508774 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 31508833 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508834 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 31508893 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508894 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 31508953 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508954 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 31509013 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509014 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 31509073 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509074 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 31509133 Query: 422 caa 424 ||| Sbjct: 31509134 caa 31509136 Score = 698 bits (352), Expect = 0.0 Identities = 352/352 (100%) Strand = Plus / Minus Query: 73 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 133 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 193 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 253 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 313 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 373 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 11512966 Score = 488 bits (246), Expect = e-135 Identities = 249/250 (99%) Strand = Plus / Minus Query: 175 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 235 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 295 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 415 gaaaacccaa 424 |||||||||| Sbjct: 27320423 gaaaacccaa 27320414 Score = 133 bits (67), Expect = 5e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 89 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 148 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 149 taaaggaggtggggg 163 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 92 gtcgagagggaaacagcccggatcaccagctaaggccc 129 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83882 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 83823 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83822 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 83763 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83762 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 83703 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83702 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 83643 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83642 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 83583 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83582 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 83523 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83522 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 83463 Query: 422 caa 424 ||| Sbjct: 83462 caa 83460
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118989 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118930 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118929 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118870 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118869 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 118810 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118809 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 118750 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 118690 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118689 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 118630 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118629 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 118570 Query: 422 caa 424 ||| Sbjct: 118569 caa 118567 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96188 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96248 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96249 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 96308 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96309 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 96368 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96369 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 96428 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96429 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 96488 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96489 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 96548 Query: 422 caa 424 ||| Sbjct: 96549 caa 96551
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123177 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 123236 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123237 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 123296 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123297 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 123356 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123357 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 123416 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123417 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 123476 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 123536 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 123596 Query: 422 caa 424 ||| Sbjct: 123597 caa 123599 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14903 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 14962 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14963 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 15022 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15023 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 15082 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15083 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 15142 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15143 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 15202 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15203 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 15262 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15263 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 15322 Query: 422 caa 424 ||| Sbjct: 15323 caa 15325
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141711 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 141770 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141771 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 141830 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141831 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 141890 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141891 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 141950 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141951 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 142010 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142011 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 142070 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142071 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 142130 Query: 422 caa 424 ||| Sbjct: 142131 caa 142133
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269063 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9269122 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269123 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9269182 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269183 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 9269242 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269243 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 9269302 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269303 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 9269362 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269363 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 9269422 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269423 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 9269482 Query: 422 caa 424 ||| Sbjct: 9269483 caa 9269485 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228563 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9228622 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228623 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9228682 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228683 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 9228742 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228743 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 9228802 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228803 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 9228862 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228863 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 9228922 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228923 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 9228982 Query: 422 caa 424 ||| Sbjct: 9228983 caa 9228985 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165151 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9165210 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165211 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9165270 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165271 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 9165330 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165331 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 9165390 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165391 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 9165450 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165451 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 9165510 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165511 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 9165570 Query: 422 caa 424 ||| Sbjct: 9165571 caa 9165573 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056977 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9057036 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057037 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9057096 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057097 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 9057156 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057157 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 9057216 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057217 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 9057276 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 9057336 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 9057396 Query: 422 caa 424 ||| Sbjct: 9057397 caa 9057399
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939048 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 19939107 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939108 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 19939167 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939168 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 19939227 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939228 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 19939287 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939288 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 19939347 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939348 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 19939407 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939408 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 19939467 Query: 422 caa 424 ||| Sbjct: 19939468 caa 19939470 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387915 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10387974 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387975 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10388034 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388035 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 10388094 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388095 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 10388154 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388155 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 10388214 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388215 ggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 10388274 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388275 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 10388334 Query: 422 caa 424 ||| Sbjct: 10388335 caa 10388337 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276383 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10276324 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276323 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10276264 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276263 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 10276204 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276203 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 10276144 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10276143 tgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatc 10276084 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276083 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 10276024 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276023 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 10275964 Query: 422 caa 424 ||| Sbjct: 10275963 caa 10275961 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 229 gatcgagcgcccttgcgctgaagatgaacggggctaagc 267 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 170 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068 Score = 46.1 bits (23), Expect = 0.092 Identities = 81/98 (82%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||| |||| ||| |||||||||| |||| |||||||||| ||||||| ||| | Sbjct: 781057 caaatcgagacaaagtctaaatactagatgtgac--aaaaataaca-gggtcaatgtcag 781113 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagag 99 | ||||||| | ||| ||||| || ||||||||||| Sbjct: 781114 ctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241218 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9241159 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241158 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9241099 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241098 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 9241039 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241038 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 9240979 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240978 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 9240919 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240918 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 9240859 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240858 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 9240799 Query: 422 caa 424 ||| Sbjct: 9240798 caa 9240796 Score = 151 bits (76), Expect = 2e-33 Identities = 117/128 (91%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||| |||||||||||||||||||||||||||||| |||||||||||| | |||| Sbjct: 3580510 caaatcgagacaaactctgaatactagatatgacccaaaagtaacaggggtcatgatcgg 3580451 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaac-agcccggatcaccag 120 |||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||| Sbjct: 3580450 -tagtgagacgatgggggataagcttcatcgtcgagagagaaacaaccccaaatcaccag 3580392 Query: 121 ctaaggcc 128 |||||||| Sbjct: 3580391 ctaaggcc 3580384 Score = 109 bits (55), Expect = 7e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 117 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 170 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 171 acagccaggaggtttgcctagaagcagccaccctttaaagag 212 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 278 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 324 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagct 281 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 116 accagctaaggcccctaaatgaccgctcagtgataaagga 155 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599230 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 31599289 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599290 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 31599349 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599350 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 31599409 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599410 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 31599469 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599470 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 31599529 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599530 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 31599589 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599590 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 31599649 Query: 422 caa 424 ||| Sbjct: 31599650 caa 31599652 Score = 698 bits (352), Expect = 0.0 Identities = 352/352 (100%) Strand = Plus / Minus Query: 73 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 133 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 193 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 253 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 313 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 373 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 11509729 Score = 488 bits (246), Expect = e-135 Identities = 249/250 (99%) Strand = Plus / Minus Query: 175 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 235 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 295 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 415 gaaaacccaa 424 |||||||||| Sbjct: 27411746 gaaaacccaa 27411737 Score = 133 bits (67), Expect = 5e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 89 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 148 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 149 taaaggaggtggggg 163 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 92 gtcgagagggaaacagcccggatcaccagctaaggccc 129 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46995 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 46936 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46935 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 46876 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46875 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 46816 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46815 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 46756 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46755 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 46696 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46695 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 46636 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46635 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 46576 Query: 422 caa 424 ||| Sbjct: 46575 caa 46573
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52431 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 52372 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 52312 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52311 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 52252 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52251 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 52192 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52191 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 52132 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52131 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 52072 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52071 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 52012 Query: 422 caa 424 ||| Sbjct: 52011 caa 52009
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 574 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 634 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 694 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 754 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 814 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 874 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 934 Query: 422 caa 424 ||| Sbjct: 935 caa 937
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 769 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 829 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 889 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 949 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 950 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 1009 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 1069 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1070 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1129 Query: 422 caa 424 ||| Sbjct: 1130 caa 1132
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 640 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 700 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 760 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 820 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 880 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 940 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1000 Query: 422 caa 424 ||| Sbjct: 1001 caa 1003
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 390 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 450 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 510 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 570 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 630 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 690 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 750 Query: 422 caa 424 ||| Sbjct: 751 caa 753
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 769 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 829 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 889 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 949 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 950 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 1009 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 1069 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1070 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1129 Query: 422 caa 424 ||| Sbjct: 1130 caa 1132
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950324 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 19950383 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950384 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 19950443 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950444 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 19950503 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950504 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 19950563 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950564 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 19950623 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950624 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 19950683 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950684 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 19950743 Query: 422 caa 424 ||| Sbjct: 19950744 caa 19950746 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393954 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10394013 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394014 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10394073 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394074 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 10394133 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394134 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 10394193 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394194 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 10394253 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394254 ggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 10394313 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394314 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 10394373 Query: 422 caa 424 ||| Sbjct: 10394374 caa 10394376 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282422 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10282363 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282362 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10282303 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282302 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 10282243 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282242 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 10282183 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10282182 tgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatc 10282123 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282122 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 10282063 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282062 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 10282003 Query: 422 caa 424 ||| Sbjct: 10282002 caa 10282000 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 229 gatcgagcgcccttgcgctgaagatgaacggggctaagc 267 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 170 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019 Score = 46.1 bits (23), Expect = 0.092 Identities = 81/98 (82%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||| |||| ||| |||||||||| |||| |||||||||| ||||||| ||| | Sbjct: 781054 caaatcgagacaaagtctaaatactagatgtgac--aaaaataaca-gggtcaatgtcag 781110 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagag 99 | ||||||| | ||| ||||| || ||||||||||| Sbjct: 781111 ctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118904 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118844 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118843 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 118784 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118783 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 118724 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118723 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 118664 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118663 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 118604 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118603 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 118544 Query: 422 caa 424 ||| Sbjct: 118543 caa 118541 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96076 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96135 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96195 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96196 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 96255 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96256 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 96315 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96316 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 96375 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96376 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 96435 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96436 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 96495 Query: 422 caa 424 ||| Sbjct: 96496 caa 96498
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119155 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 119096 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119095 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 119036 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119035 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 118976 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118975 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 118916 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118915 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 118856 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118855 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 118796 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118795 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 118736 Query: 422 caa 424 ||| Sbjct: 118735 caa 118733 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95739 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 95798 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95799 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 95858 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95859 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 95918 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95919 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 95978 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95979 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 96038 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96039 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 96098 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96099 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 96158 Query: 422 caa 424 ||| Sbjct: 96159 caa 96161
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117936 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 117877 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117876 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 117817 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117816 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 117757 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117756 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 117697 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117696 tgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatc 117637 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117636 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 117577 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117576 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 117517 Query: 422 caa 424 ||| Sbjct: 117516 caa 117514
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 458 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 398 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 338 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 278 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 218 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 217 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 158 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 98 Query: 422 caa 424 ||| Sbjct: 97 caa 95
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94307 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 94366 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94367 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 94426 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94427 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 94486 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94487 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 94546 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94547 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 94606 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94607 ggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 94666 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94667 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 94726 Query: 422 caa 424 ||| Sbjct: 94727 caa 94729
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43979 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 43920 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43919 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 43860 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43859 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 43800 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43799 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 43740 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43739 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 43680 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 43679 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 43620 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43619 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 43560 Query: 422 caa 424 ||| Sbjct: 43559 caa 43557 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21138 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 21197 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21198 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 21257 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21258 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 21317 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21318 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 21377 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21378 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 21437 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 21438 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 21497 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21498 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 21557 Query: 422 caa 424 ||| Sbjct: 21558 caa 21560
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57708 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 57649 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57648 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 57589 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57588 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 57529 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57528 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 57469 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 57468 tgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatc 57409 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57408 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 57349 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57348 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 57289 Query: 422 caa 424 ||| Sbjct: 57288 caa 57286
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 550 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 490 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 430 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 370 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 310 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 309 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 250 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 190 Query: 422 caa 424 ||| Sbjct: 189 caa 187
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28371 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 28430 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28431 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 28490 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28491 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 28550 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28551 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 28610 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28611 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 28670 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28671 ggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 28730 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28731 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 28790 Query: 422 caa 424 ||| Sbjct: 28791 caa 28793
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122819 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 122760 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122759 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 122700 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122699 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 122640 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122639 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 122580 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122579 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 122520 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122519 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 122460 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122459 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 122400 Query: 422 caa 424 ||| Sbjct: 122399 caa 122397 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100018 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 100077 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100078 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 100137 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100138 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 100197 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100198 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 100257 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100258 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 100317 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 100318 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 100377 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100378 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 100437 Query: 422 caa 424 ||| Sbjct: 100438 caa 100440
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 768 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 828 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 829 taaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggag 888 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 948 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 1008 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 1068 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1128 Query: 422 caa 424 ||| Sbjct: 1129 caa 1131
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 392 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 452 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 512 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 572 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 632 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 633 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgacgaagcgg 692 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 752 Query: 422 caa 424 ||| Sbjct: 753 caa 755
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123536 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 123477 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123476 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 123417 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123416 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 123357 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123356 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 123297 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 123237 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 123236 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 123177 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123176 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 123117 Query: 422 caa 424 ||| Sbjct: 123116 caa 123114 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100695 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 100754 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100755 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 100814 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100815 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 100874 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100875 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 100934 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100935 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 100994 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 100995 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 101054 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101055 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 101114 Query: 422 caa 424 ||| Sbjct: 101115 caa 101117
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 825 bits (416), Expect = 0.0 Identities = 416/416 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526546 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 33526605 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526606 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 33526665 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526666 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 33526725 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526726 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 33526785 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526786 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 33526845 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526846 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 33526905 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526906 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 7e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 82 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 141 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 142 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 201 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 202 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 262 ctaagcgatctgccgaagctgtgggatgtcaaaat 296 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 99.6 bits (50), Expect = 7e-18 Identities = 106/122 (86%), Gaps = 2/122 (1%) Strand = Plus / Minus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 422 ca 423 || Sbjct: 1076660 ca 1076659 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 229 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 270 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 2e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 298 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 357 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 358 gcggaagcgagaatgtcggcttgagtaac 386 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 378 ttgagtaacgaaaacattggtgagaatc 405 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 825 bits (416), Expect = 0.0 Identities = 416/416 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71743 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 71802 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71803 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 71862 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71863 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 71922 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71923 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 71982 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71983 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 72042 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72043 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 72102 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72103 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 378 ttgagtaacgaaaacattggtgagaatc 405 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 807 bits (407), Expect = 0.0 Identities = 407/407 (100%) Strand = Plus / Plus Query: 18 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 78 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 138 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 198 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 258 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 318 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 378 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 424 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 407
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 789 bits (398), Expect = 0.0 Identities = 398/398 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 771 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 831 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 891 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 951 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 1011 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 1071 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtg 399 |||||||||||||||||||||||||||||||||||||| Sbjct: 1072 aagcgagaatgtcggcttgagtaacgaaaacattggtg 1109
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 783 bits (395), Expect = 0.0 Identities = 417/423 (98%), Gaps = 1/423 (0%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 122701 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 122641 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122640 taaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgag 122581 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 122580 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccct 122522 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122521 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 122462 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122461 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 122402 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122401 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 122342 Query: 422 caa 424 ||| Sbjct: 122341 caa 122339 Score = 783 bits (395), Expect = 0.0 Identities = 417/423 (98%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99977 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 100036 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100037 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 100096 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 100097 taaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgag 100156 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 100157 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccct 100215 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100216 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 100275 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 100276 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 100335 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100336 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 100395 Query: 422 caa 424 ||| Sbjct: 100396 caa 100398
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 783 bits (395), Expect = 0.0 Identities = 417/423 (98%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6330 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 6389 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6390 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 6449 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 6450 taaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgag 6509 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 6510 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccct 6568 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6569 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 6628 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6629 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 6688 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6689 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 6748 Query: 422 caa 424 ||| Sbjct: 6749 caa 6751
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 783 bits (395), Expect = 0.0 Identities = 417/423 (98%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 977 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1037 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1038 taaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgag 1097 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1098 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccct 1156 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1157 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 1216 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1217 ggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcgg 1276 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1277 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 1336 Query: 422 caa 424 ||| Sbjct: 1337 caa 1339
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 720 bits (363), Expect = 0.0 Identities = 408/423 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 906 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 965 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1025 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 1085 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1086 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1145 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1146 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 1205 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| Sbjct: 1206 ggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcgg 1265 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1266 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1325 Query: 422 caa 424 ||| Sbjct: 1326 caa 1328
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 720 bits (363), Expect = 0.0 Identities = 408/423 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 132091 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 132032 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132031 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 131972 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 131971 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 131912 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 131911 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 131852 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131851 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 131792 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| Sbjct: 131791 ggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcgg 131732 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131731 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 131672 Query: 422 caa 424 ||| Sbjct: 131671 caa 131669 Score = 720 bits (363), Expect = 0.0 Identities = 408/423 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 104673 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 104732 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104733 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 104792 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 104793 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 104852 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 104853 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 104912 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104913 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 104972 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| Sbjct: 104973 ggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcgg 105032 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105033 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 105092 Query: 422 caa 424 ||| Sbjct: 105093 caa 105095
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 720 bits (363), Expect = 0.0 Identities = 408/423 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 133052 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 132993 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132992 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 132933 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 132932 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 132873 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 132872 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 132813 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132812 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 132753 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| Sbjct: 132752 ggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcgg 132693 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132692 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 132633 Query: 422 caa 424 ||| Sbjct: 132632 caa 132630 Score = 720 bits (363), Expect = 0.0 Identities = 408/423 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 105597 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 105656 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105657 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 105716 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 105717 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 105776 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 105777 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 105836 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105837 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 105896 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| Sbjct: 105897 ggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcgg 105956 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105957 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106016 Query: 422 caa 424 ||| Sbjct: 106017 caa 106019
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 712 bits (359), Expect = 0.0 Identities = 407/423 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 138597 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcgg 138538 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138537 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 138478 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 138477 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 138418 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 138417 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 138358 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138357 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 138298 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||| ||||| |||||| || |||||||||| Sbjct: 138297 ggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcgg 138238 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138237 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 138178 Query: 422 caa 424 ||| Sbjct: 138177 caa 138175 Score = 712 bits (359), Expect = 0.0 Identities = 407/423 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 110500 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcgg 110559 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110560 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 110619 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 110620 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 110679 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 110680 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 110739 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110740 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 110799 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||| ||||| |||||| || |||||||||| Sbjct: 110800 ggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcgg 110859 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110860 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 110919 Query: 422 caa 424 ||| Sbjct: 110920 caa 110922
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 706 bits (356), Expect = 0.0 Identities = 404/420 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 141200 caaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcgg 141141 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141140 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 141081 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 141080 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 141021 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 141020 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 140961 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140960 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 140901 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||| || || |||||||||| Sbjct: 140900 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcgg 140841 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 140840 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 140781 Score = 706 bits (356), Expect = 0.0 Identities = 404/420 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 112457 caaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcgg 112516 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112517 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112576 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 112577 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 112636 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 112637 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 112696 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112697 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 112756 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||| || || |||||||||| Sbjct: 112757 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcgg 112816 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112817 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 112876
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 706 bits (356), Expect = 0.0 Identities = 404/420 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 138802 caaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcgg 138743 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138742 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 138683 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 138682 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 138623 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 138622 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 138563 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 138562 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 138503 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||| Sbjct: 138502 ggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcgg 138443 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138442 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 138383 Score = 706 bits (356), Expect = 0.0 Identities = 404/420 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 110497 caaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcgg 110556 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110557 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 110616 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 110617 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 110676 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 110677 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 110736 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 110737 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 110796 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||| Sbjct: 110797 ggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcgg 110856 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110857 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 110916
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 704 bits (355), Expect = 0.0 Identities = 404/420 (96%), Gaps = 4/420 (0%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 126956 caaatcgaggcaaactctgaatactagatatgaccccaaa----caggggtcaaggtcgg 126901 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126900 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 126841 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 126840 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 126781 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 126780 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 126721 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126720 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 126661 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| ||||| |||| || || |||||||||| Sbjct: 126660 ggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcgg 126601 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 126600 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 126541 Score = 704 bits (355), Expect = 0.0 Identities = 404/420 (96%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 107966 caaatcgaggcaaactctgaatactagatatgaccccaaa----caggggtcaaggtcgg 108021 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108022 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 108081 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 108082 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 108141 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 108142 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 108201 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108202 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 108261 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| ||||| |||| || || |||||||||| Sbjct: 108262 ggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcgg 108321 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 108322 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 108381
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 698 bits (352), Expect = 0.0 Identities = 403/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130760 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 130701 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130700 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 130641 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 130640 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 130581 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 130580 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 130521 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 130520 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 130461 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||||| || |||||||||| Sbjct: 130460 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcgg 130401 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130400 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 130341 Score = 698 bits (352), Expect = 0.0 Identities = 403/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 103875 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 103934 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103935 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 103994 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 103995 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 104054 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 104055 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 104114 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 104115 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 104174 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||||| || |||||||||| Sbjct: 104175 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcgg 104234 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104235 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 104294
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 698 bits (352), Expect = 0.0 Identities = 352/352 (100%) Strand = Plus / Minus Query: 73 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 133 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 193 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 253 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 313 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 373 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 63538
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 698 bits (352), Expect = 0.0 Identities = 404/420 (96%), Gaps = 1/420 (0%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 133315 caaatcgaggcaaactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcgg 133257 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133256 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 133197 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 133196 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 133137 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 133136 gtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 133077 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133076 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 133017 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| |||| || || |||||||||| Sbjct: 133016 ggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcgg 132957 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132956 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 132897 Score = 698 bits (352), Expect = 0.0 Identities = 404/420 (96%), Gaps = 1/420 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 104656 caaatcgaggcaaactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcgg 104714 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104715 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 104774 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 104775 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 104834 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 104835 gtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 104894 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104895 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 104954 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| |||| || || |||||||||| Sbjct: 104955 ggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcgg 105014 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105015 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 105074
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131868 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 131809 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131808 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 131749 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 131748 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 131689 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 131688 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 131629 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 131628 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 131569 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||||| || |||||||||| Sbjct: 131568 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcgg 131509 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131508 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 131449 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105010 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 105069 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105070 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 105129 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 105130 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 105189 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 105190 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 105249 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 105250 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 105309 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||||| || |||||||||| Sbjct: 105310 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcgg 105369 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105370 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 105429
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 134994 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 134935 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134934 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134875 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 134874 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 134815 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134814 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134755 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134754 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 134695 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| | ||| ||| | || |||||||||| Sbjct: 134694 ggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcgg 134635 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134634 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134575 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 106912 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 106971 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106972 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107031 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 107032 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 107091 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 107092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 107151 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107152 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 107211 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| | ||| ||| | || |||||||||| Sbjct: 107212 ggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcgg 107271 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107272 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107331
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135685 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135626 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135625 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135566 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135565 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 135506 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 135505 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 135446 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 135445 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 135386 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||| | ||||| ||||| || |||||||||| Sbjct: 135385 ggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcgg 135326 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135325 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 135266 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106740 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106799 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106800 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106859 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106860 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106919 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106920 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106979 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 106980 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 107039 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||| | ||||| ||||| || |||||||||| Sbjct: 107040 ggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcgg 107099 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107100 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107159
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 135273 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 135214 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135213 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135154 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135153 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 135094 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 135093 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 135034 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135033 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 134974 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| | ||| ||| | || |||||||||| Sbjct: 134973 ggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcgg 134914 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134913 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134854 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 107134 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 107193 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107194 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107253 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 107254 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 107313 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 107314 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 107373 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107374 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 107433 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||||| | ||| ||| | || |||||||||| Sbjct: 107434 ggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcgg 107493 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107494 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107553
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131861 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 131802 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131801 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 131742 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 131741 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 131682 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 131681 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 131622 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 131621 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 131562 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||||| || |||||||||| Sbjct: 131561 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcgg 131502 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131501 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 131442 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105008 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 105067 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105068 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 105127 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 105128 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 105187 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 105188 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 105247 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 105248 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 105307 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| |||||| ||||| ||||| || |||||||||| Sbjct: 105308 ggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcgg 105367 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105368 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 105427
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 690 bits (348), Expect = 0.0 Identities = 402/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 908 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 967 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1027 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1028 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 1087 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1088 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1147 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1148 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatc 1207 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||| |||||||| | ||| ||| | ||| |||||||||| Sbjct: 1208 ggtaggggagcgttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcgg 1267 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1268 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1327
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 688 bits (347), Expect = 0.0 Identities = 347/347 (100%) Strand = Plus / Plus Query: 78 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 138 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 198 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 258 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 318 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 378 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 424 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 347
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 684 bits (345), Expect = 0.0 Identities = 405/425 (95%), Gaps = 5/425 (1%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaag 56 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 138678 caaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaag 138619 Query: 57 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138618 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 138559 Query: 117 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 176 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 138558 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 138499 Query: 177 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 236 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138498 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 138439 Query: 237 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 296 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138438 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 138379 Query: 297 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 356 |||||||||||||||||||||||||||||| |||||| ||||| ||| || || ||||| Sbjct: 138378 gcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacga 138319 Query: 357 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 416 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138318 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 138259 Query: 417 aaacc 421 ||||| Sbjct: 138258 aaacc 138254 Score = 684 bits (345), Expect = 0.0 Identities = 405/425 (95%), Gaps = 5/425 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaag 56 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111267 caaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaag 111326 Query: 57 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111327 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 111386 Query: 117 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 176 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 111387 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 111446 Query: 177 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 236 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111447 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 111506 Query: 237 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 296 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111507 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 111566 Query: 297 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 356 |||||||||||||||||||||||||||||| |||||| ||||| ||| || || ||||| Sbjct: 111567 gcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacga 111626 Query: 357 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 416 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111627 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 111686 Query: 417 aaacc 421 ||||| Sbjct: 111687 aaacc 111691
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135393 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135334 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135333 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135274 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135273 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 135214 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 135213 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 135154 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 135153 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 135094 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 135093 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 135034 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135033 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134974 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107237 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107296 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107297 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107356 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 107357 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 107416 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 107417 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 107476 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 107477 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 107536 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 107537 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 107596 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107597 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107656
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 136031 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135972 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135971 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135912 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135911 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 135852 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 135851 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 135792 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 135791 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 135732 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||||| Sbjct: 135731 ggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcgg 135672 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135671 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 135612 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107526 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107585 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107586 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107645 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 107646 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 107705 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 107706 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 107765 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 107766 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 107825 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||||| Sbjct: 107826 ggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcgg 107885 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107886 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107945
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141972 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 141913 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141912 ctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagc 141853 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 141852 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggag 141793 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 141792 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 141733 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 141732 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 141673 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 141672 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 141613 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141612 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 141553 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111356 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 111415 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111416 ctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagc 111475 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111476 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggag 111535 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 111536 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 111595 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 111596 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 111655 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 111656 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 111715 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111716 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 111775
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2431 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 2490 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2491 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 2550 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 2551 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 2610 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 2611 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 2670 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2671 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 2730 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 2731 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 2790 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2791 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 2850
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134639 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134580 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134579 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134520 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 134519 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 134460 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134459 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134400 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 134399 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 134340 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 134339 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 134280 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134279 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134220 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106397 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106456 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106516 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106517 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106576 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106577 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106636 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 106637 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 106696 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 106697 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 106756 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106757 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106816
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134774 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134715 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134714 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134655 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 134654 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 134595 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134594 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134535 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 134534 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 134475 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 134474 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 134415 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134414 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134355 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106569 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106628 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106688 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106689 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106748 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106749 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106808 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 106809 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 106868 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 106869 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 106928 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106929 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106988
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134772 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134713 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134712 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134653 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 134652 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 134593 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134592 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134533 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 134532 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 134473 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 134472 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 134413 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134412 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134353 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106566 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106625 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106626 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106685 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106686 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106745 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106746 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106805 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 106806 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 106865 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 106866 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 106925 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106926 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106985
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134684 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134625 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134624 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134565 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 134564 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 134505 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134504 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134445 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 134444 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 134385 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 134384 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 134325 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134324 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134265 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106444 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106503 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106504 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106563 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106564 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106623 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106624 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106683 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 106684 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 106743 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 106744 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 106803 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106804 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106863
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135391 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135332 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135331 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135272 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135271 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 135212 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 135211 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 135152 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 135151 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 135092 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 135091 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 135032 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135031 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134972 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107235 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107294 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107295 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107354 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 107355 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 107414 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 107415 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 107474 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 107475 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 107534 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 107535 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 107594 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107595 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107654
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135122 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135063 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135062 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135003 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135002 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 134943 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134942 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134883 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 134882 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 134823 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 134822 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 134763 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134762 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134703 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107016 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107075 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107076 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107135 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 107136 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 107195 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 107196 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 107255 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 107256 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 107315 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 107316 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 107375 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107376 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 107435
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1004 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 1063 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1123 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1124 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 1183 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1184 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1243 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1244 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 1303 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 1304 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 1363 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1364 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1423
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 674 bits (340), Expect = 0.0 Identities = 400/420 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 134651 caaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcgg 134592 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134591 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134532 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 134531 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 134472 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 134471 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 134412 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 134411 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 134352 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 134351 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 134292 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134291 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 134232 Score = 674 bits (340), Expect = 0.0 Identities = 400/420 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 106411 caaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcgg 106470 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106471 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106530 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106531 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106590 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106591 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106650 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 106651 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatc 106710 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 106711 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 106770 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106771 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106830
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 670 bits (338), Expect = 0.0 Identities = 398/418 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 904 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcgg 963 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1023 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1024 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccaggag 1083 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1084 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1143 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1144 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 1203 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||| Sbjct: 1204 cgtaggggagcgttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcgg 1263 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||||| |||||| |||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1264 aagcgaaaatgtccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaa 1321
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 666 bits (336), Expect = 0.0 Identities = 400/420 (95%), Gaps = 1/420 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 2677 caaatcgaggcaaactctgaatactagatatgactcaaaa-taacaggggtcaaggtcgg 2735 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2736 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagc 2795 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 2796 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 2855 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 2856 gtttgcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctct 2915 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2916 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 2975 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 2976 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 3035 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3036 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 3095
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 656 bits (331), Expect = 0.0 Identities = 400/423 (94%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 130960 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcgg 130901 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130900 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 130841 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 130840 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggag 130781 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 130780 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 130721 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | ||| Sbjct: 130720 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatc 130661 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||| | ||||| ||| | | | |||||||||| Sbjct: 130660 ggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcgg 130601 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 130600 aagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacc 130541 Query: 422 caa 424 ||| Sbjct: 130540 caa 130538 Score = 656 bits (331), Expect = 0.0 Identities = 400/423 (94%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 104434 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcgg 104493 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104494 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 104553 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 104554 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggag 104613 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 104614 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 104673 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | ||| Sbjct: 104674 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatc 104733 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||| | ||||| ||| | | | |||||||||| Sbjct: 104734 ggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcgg 104793 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 104794 aagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacc 104853 Query: 422 caa 424 ||| Sbjct: 104854 caa 104856
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 652 bits (329), Expect = 0.0 Identities = 329/329 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 590 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 650 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 710 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 770 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 830 Query: 302 ggtaggggagcgttccgccttagagggaa 330 ||||||||||||||||||||||||||||| Sbjct: 831 ggtaggggagcgttccgccttagagggaa 859
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 650 bits (328), Expect = 0.0 Identities = 379/396 (95%) Strand = Plus / Minus Query: 29 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 88 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 89 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 148 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 149 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 208 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 209 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 269 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 329 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 388 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 389 aaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaacccaa 245
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 650 bits (328), Expect = 0.0 Identities = 397/420 (94%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 129623 caaatcgaggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcgg 129564 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129563 ccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagc 129504 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 129503 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 129444 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 129443 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 129384 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 129383 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatc 129324 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||| | ||||| ||| | ||| |||||||||| Sbjct: 129323 ggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcgg 129264 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 129263 aagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacc 129204 Score = 650 bits (328), Expect = 0.0 Identities = 397/420 (94%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 102833 caaatcgaggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcgg 102892 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102893 ccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagc 102952 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 102953 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 103012 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 103013 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 103072 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 103073 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatc 103132 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||||||||||||| | ||||| ||| | ||| |||||||||| Sbjct: 103133 ggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcgg 103192 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 103193 aagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacc 103252
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 638 bits (322), Expect = e-180 Identities = 396/420 (94%), Gaps = 8/420 (1%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 134077 caaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcgg 134025 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134024 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 133965 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 133964 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 133905 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 133904 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 133845 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133844 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 133785 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||| ||||||||||||| ||||| ||| || || |||||||||| Sbjct: 133784 ggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcgg 133726 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133725 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 133666 Score = 638 bits (322), Expect = e-180 Identities = 396/420 (94%), Gaps = 8/420 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 106205 caaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcgg 106257 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106258 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106317 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106318 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 106377 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 106378 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 106437 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106438 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 106497 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||| ||||||||||||| ||||| ||| || || |||||||||| Sbjct: 106498 ggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcgg 106556 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106557 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 106616
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 620 bits (313), Expect = e-175 Identities = 395/421 (93%), Gaps = 1/421 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1402 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 1461 Query: 62 ccagtgagacgatggggg-ataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 ccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccag 1521 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1522 ctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccagga 1581 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1582 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1641 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1642 ttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacat 1701 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 |||||||||||||||||| |||| |||||||| | ||| ||| | ||||||||| Sbjct: 1702 cggtaggggagcgttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcg 1761 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1762 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1821 Query: 421 c 421 | Sbjct: 1822 c 1822
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 618 bits (312), Expect = e-174 Identities = 394/420 (93%), Gaps = 1/420 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 924 caaatcgaggcaaactctgaatactagatatgacctaaaaataacaagggtcaaggtcgg 983 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 984 caagtgagacgatgggggataagcttcatcgtcgagagggaaacagccctgatcacccgc 1043 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1044 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggag 1103 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| || |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1104 gtttgc-tataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1162 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 1163 tgcgccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatc 1222 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||| ||||| |||||||| | ||| ||| | ||| |||||||||| Sbjct: 1223 ggtaggggagcgttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcgg 1282 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1283 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1342
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 607 bits (306), Expect = e-170 Identities = 394/420 (93%), Gaps = 5/420 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 368 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 427 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 487 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||| Sbjct: 488 taaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcga-gacagccaggag 546 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 547 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 606 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 607 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatc 666 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| Sbjct: 667 ggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcgg 726 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 727 aagcgagaatgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacc 782
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 605 bits (305), Expect = e-170 Identities = 393/421 (93%), Gaps = 1/421 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcg 60 ||||||||||||||||||||||||||||||||| || |||||||||||| | |||||| Sbjct: 910 caaatcgaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtca 969 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 970 accagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 1029 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| Sbjct: 1030 ctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccagga 1089 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1090 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1149 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1150 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 1209 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||||||||||||||||| | ||| ||| || || ||||||||| Sbjct: 1210 cggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcg 1269 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1270 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1329 Query: 421 c 421 | Sbjct: 1330 c 1330
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 599 bits (302), Expect = e-168 Identities = 398/425 (93%), Gaps = 5/425 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 927 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcgg 986 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1046 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1047 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 1106 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1107 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1166 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1167 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 1226 Query: 302 ggtaggggagcgttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagc 359 |||||||||||||||||||||| | |||| || | |||||| |||| | |||||| | Sbjct: 1227 ggtaggggagcgttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaac 1286 Query: 360 gg-aagcgagaatgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccga 416 || || | ||||||||||||||||||||| |||||| |||||||||||| |||||||||| Sbjct: 1287 ggaaaccaagaatgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccga 1346 Query: 417 aaacc 421 ||||| Sbjct: 1347 aaacc 1351
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 591 bits (298), Expect = e-166 Identities = 396/429 (92%), Gaps = 16/429 (3%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||| || || |||| |||||||||||| Sbjct: 139453 caaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcgg 139401 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139400 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 139341 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 139340 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 139281 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 139280 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 139221 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------gtcaaa 294 ||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 139220 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaa 139161 Query: 295 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gggggtcg 352 ||||||||||||||||||||||||||||||||||||||| ||||| ||| | | || | Sbjct: 139160 atgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtgg 139101 Query: 353 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 412 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 139100 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 139041 Query: 413 ccgaaaacc 421 ||||||||| Sbjct: 139040 ccgaaaacc 139032 Score = 591 bits (298), Expect = e-166 Identities = 396/429 (92%), Gaps = 16/429 (3%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||| || || |||| |||||||||||| Sbjct: 110607 caaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcgg 110659 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110660 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 110719 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 110720 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 110779 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 110780 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 110839 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------gtcaaa 294 ||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 110840 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaa 110899 Query: 295 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gggggtcg 352 ||||||||||||||||||||||||||||||||||||||| ||||| ||| | | || | Sbjct: 110900 atgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtgg 110959 Query: 353 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 412 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 110960 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 111019 Query: 413 ccgaaaacc 421 ||||||||| Sbjct: 111020 ccgaaaacc 111028
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 581 bits (293), Expect = e-163 Identities = 390/421 (92%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa-ggtcg 60 ||||||||||||||||||||||||||||||||| || |||||| ||||| || |||| Sbjct: 117239 caaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtca 117180 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 117179 accagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 117120 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||| Sbjct: 117119 ctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccagga 117060 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 117059 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 117000 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 116999 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 116940 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||||||||||||||||| | ||| ||| || || ||||||||| Sbjct: 116939 cggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcg 116880 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 116879 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 116820 Query: 421 c 421 | Sbjct: 116819 c 116819 Score = 581 bits (293), Expect = e-163 Identities = 390/421 (92%), Gaps = 1/421 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa-ggtcg 60 ||||||||||||||||||||||||||||||||| || |||||| ||||| || |||| Sbjct: 90863 caaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtca 90922 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 90923 accagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 90982 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||| Sbjct: 90983 ctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccagga 91042 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 91043 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 91102 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 91103 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 91162 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||||||||||||||||| | ||| ||| || || ||||||||| Sbjct: 91163 cggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcg 91222 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91223 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 91282 Query: 421 c 421 | Sbjct: 91283 c 91283
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 575 bits (290), Expect = e-161 Identities = 391/422 (92%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcg 60 |||||||| ||||||||||||||||||| ||||||| | |||||| |||||| ||||||| Sbjct: 51779 caaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcg 51720 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51719 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 51660 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccagg 179 ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 51659 ctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccagg 51600 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 51599 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgct 51540 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 ||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 51539 cttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagaca 51480 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 ||||||||||||||||||||||||||||||||| | || ||| | ||| |||||||| Sbjct: 51479 tcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagc 51420 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 51419 ggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 51360 Query: 420 cc 421 || Sbjct: 51359 cc 51358 Score = 575 bits (290), Expect = e-161 Identities = 391/422 (92%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcg 60 |||||||| ||||||||||||||||||| ||||||| | |||||| |||||| ||||||| Sbjct: 38049 caaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcg 38108 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38109 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 38168 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccagg 179 ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 38169 ctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccagg 38228 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 38229 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgct 38288 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 ||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 38289 cttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagaca 38348 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 ||||||||||||||||||||||||||||||||| | || ||| | ||| |||||||| Sbjct: 38349 tcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagc 38408 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 38409 ggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 38468 Query: 420 cc 421 || Sbjct: 38469 cc 38470
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 575 bits (290), Expect = e-161 Identities = 391/422 (92%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcg 60 |||||||| ||||||||||||||||||| ||||||| | |||||| |||||| ||||||| Sbjct: 4977 caaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcg 5036 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5037 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 5096 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccagg 179 ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 5097 ctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccagg 5156 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 5157 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgct 5216 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 ||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 5217 cttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagaca 5276 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 ||||||||||||||||||||||||||||||||| | || ||| | ||| |||||||| Sbjct: 5277 tcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagc 5336 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5337 ggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 5396 Query: 420 cc 421 || Sbjct: 5397 cc 5398
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 567 bits (286), Expect = e-158 Identities = 353/374 (94%), Gaps = 1/374 (0%) Strand = Plus / Plus Query: 49 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 107 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 108 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 167 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 168 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 227 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 228 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 287 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 288 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 347 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 348 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 407 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 408 atgccccgaaaacc 421 |||||||||||||| Sbjct: 5805 atgccccgaaaacc 5818 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgaccc 37 |||||||||||||||||||||||||||||||||||| Sbjct: 5405 caaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 567 bits (286), Expect = e-158 Identities = 353/374 (94%), Gaps = 1/374 (0%) Strand = Plus / Plus Query: 49 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 107 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 108 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 167 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 168 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 227 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 228 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 287 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 288 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 347 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 348 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 407 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 408 atgccccgaaaacc 421 |||||||||||||| Sbjct: 5805 atgccccgaaaacc 5818 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgaccc 37 |||||||||||||||||||||||||||||||||||| Sbjct: 5405 caaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 565 bits (285), Expect = e-158 Identities = 388/421 (92%), Gaps = 1/421 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg-tcg 60 ||||||||||||||||||||||||||||||||| | |||||| |||| |||| || Sbjct: 910 caaatcgaggcaaactctgaatactagatatgatctccgaataacgggggataagggtca 969 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 970 accagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccag 1029 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| Sbjct: 1030 ctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccagga 1089 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1090 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1149 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 1150 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacat 1209 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 |||||||||||||||||||||||| |||||||| | ||| ||| || || ||||||||| Sbjct: 1210 cggtaggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcg 1269 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1270 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1329 Query: 421 c 421 | Sbjct: 1330 c 1330
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 563 bits (284), Expect = e-157 Identities = 392/427 (91%), Gaps = 7/427 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcg 60 |||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 906 caaatcgaagcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcg 965 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 966 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccag 1025 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1026 ctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccagga 1085 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| | Sbjct: 1086 ggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctc 1145 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg------tcaaa 294 |||||| |||||| ||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 1146 ttgcgccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaa 1205 Query: 295 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 354 || ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||| Sbjct: 1206 atacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggac 1265 Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1266 gaaacggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1325 Query: 415 gaaaacc 421 ||||||| Sbjct: 1326 gaaaacc 1332
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 559 bits (282), Expect = e-156 Identities = 387/420 (92%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||| || ||| ||||| |||||| | |||| Sbjct: 87173 caaatcgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaa 87228 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 87229 ccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagc 87288 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||| Sbjct: 87289 taaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggag 87348 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| || Sbjct: 87349 gtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctct 87408 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 87409 tgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatc 87468 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||| |||| |||||| | ||| ||| || || |||||||||| Sbjct: 87469 ggtaggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcgg 87528 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 87529 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 87588
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 557 bits (281), Expect = e-155 Identities = 344/365 (94%) Strand = Plus / Plus Query: 57 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 117 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 176 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 177 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 236 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 237 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 296 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 297 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 356 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 357 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 416 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 417 aaacc 421 ||||| Sbjct: 5542 aaacc 5546 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatat 32 ||||||||||||||||||||||||||||||| Sbjct: 5137 caaatcgaggcaaactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 557 bits (281), Expect = e-155 Identities = 344/365 (94%) Strand = Plus / Minus Query: 57 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 117 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 176 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 177 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 236 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 237 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 296 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 297 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 356 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 357 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 416 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 417 aaacc 421 ||||| Sbjct: 22383 aaacc 22379 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatat 32 ||||||||||||||||||||||||||||||| Sbjct: 22788 caaatcgaggcaaactctgaatactagatat 22758
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 547 bits (276), Expect = e-152 Identities = 276/276 (100%) Strand = Plus / Plus Query: 149 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 209 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 269 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 329 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 389 aaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaa 276
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 533 bits (269), Expect = e-148 Identities = 305/317 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130884 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 130825 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130824 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 130765 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 130764 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 130705 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 130704 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 130645 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||| Sbjct: 130644 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatc 130585 Query: 302 ggtaggggagcgttccg 318 ||||||||||||||||| Sbjct: 130584 ggtaggggagcgttccg 130568 Score = 533 bits (269), Expect = e-148 Identities = 305/317 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102561 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 102620 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102621 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 102680 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 102681 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 102740 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 102741 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 102800 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||| Sbjct: 102801 tgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatc 102860 Query: 302 ggtaggggagcgttccg 318 ||||||||||||||||| Sbjct: 102861 ggtaggggagcgttccg 102877 Score = 131 bits (66), Expect = 2e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 130474 cccgaaaacc 130465 Score = 131 bits (66), Expect = 2e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 102971 cccgaaaacc 102980
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 533 bits (269), Expect = e-148 Identities = 384/420 (91%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||| |||| || | || ||||| | |||| Sbjct: 89259 caaatcgaggcaaactctgaatactagatt--accccaataaaag-ggggtaagggtcaa 89315 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 89316 ccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagc 89375 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||| Sbjct: 89376 taaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggag 89435 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 89436 gtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcg 89495 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| Sbjct: 89496 tgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatc 89555 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||| ||||||||||| | ||| ||| || || |||||||||| Sbjct: 89556 ggtaggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcgg 89615 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 89616 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 89675
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 527 bits (266), Expect = e-147 Identities = 341/366 (93%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 416 aaaacc 421 |||||| Sbjct: 5218 aaaacc 5223 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 ||||||||||||||||||||||||||| |||| Sbjct: 4799 caaatcgaggcaaactctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 527 bits (266), Expect = e-147 Identities = 341/366 (93%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 416 aaaacc 421 |||||| Sbjct: 1328 aaaacc 1333 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 ||||||||||||||||||||||||||| |||| Sbjct: 909 caaatcgaggcaaactctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 527 bits (266), Expect = e-147 Identities = 341/366 (93%) Strand = Plus / Minus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 416 aaaacc 421 |||||| Sbjct: 149917 aaaacc 149912 Score = 527 bits (266), Expect = e-147 Identities = 341/366 (93%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 416 aaaacc 421 |||||| Sbjct: 118749 aaaacc 118754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 ||||||||||||||||||||||||||| |||| Sbjct: 150336 caaatcgaggcaaactctgaatactaggtatg 150305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 ||||||||||||||||||||||||||| |||| Sbjct: 118330 caaatcgaggcaaactctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 527 bits (266), Expect = e-147 Identities = 341/366 (93%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 416 aaaacc 421 |||||| Sbjct: 1328 aaaacc 1333 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 ||||||||||||||||||||||||||| |||| Sbjct: 909 caaatcgaggcaaactctgaatactaggtatg 940
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 525 bits (265), Expect = e-146 Identities = 388/426 (91%), Gaps = 6/426 (1%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacc--caaa---aataacagg-ggtcaa 55 ||||||||||||||||||||||||||| ||||| | |||| || |||||| ||| || Sbjct: 145649 caaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaa 145590 Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||| Sbjct: 145589 ggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatc 145530 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| | |||||||| || ||||| ||||||| Sbjct: 145529 accagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagc 145470 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 145469 caggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 145410 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 145409 cgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 145350 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 145349 aacatcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggaca 145290 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 145289 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 145230 Query: 416 aaaacc 421 |||||| Sbjct: 145229 aaaacc 145224 Score = 525 bits (265), Expect = e-146 Identities = 388/426 (91%), Gaps = 6/426 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacc--caaa---aataacagg-ggtcaa 55 ||||||||||||||||||||||||||| ||||| | |||| || |||||| ||| || Sbjct: 112813 caaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaa 112872 Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||| Sbjct: 112873 ggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatc 112932 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| | |||||||| || ||||| ||||||| Sbjct: 112933 accagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagc 112992 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 112993 caggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 113052 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 113053 cgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 113112 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 113113 aacatcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggaca 113172 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 113232 Query: 416 aaaacc 421 |||||| Sbjct: 113233 aaaacc 113238
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 525 bits (265), Expect = e-146 Identities = 313/329 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 915 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcgg 974 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 ccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1034 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||| Sbjct: 1035 taaggcccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgag 1094 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1095 gtttgcctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1154 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1155 tgcgcccaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatc 1214 Query: 302 ggtaggggagcgttccgccttagagggaa 330 |||||||||||||||| |||||||||||| Sbjct: 1215 ggtaggggagcgttcccccttagagggaa 1243 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 376 gcttgagtaacgaaaacattggtgagaatccaatgcccc 414 |||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccc 1326
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 525 bits (265), Expect = e-146 Identities = 376/413 (91%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 926 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcgg 985 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 986 ccagtgagaccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagc 1045 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct: 1046 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaagag 1105 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1106 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctct 1165 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1166 tgcgcccaaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 1225 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||| ||||| |||||| || || | | | |||| ||| || ||| Sbjct: 1226 cgtaggggagcgttcccccttaaagggaaacaccccccccaacatgggtggaccaaacgg 1285 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 || | |||||||| || | ||||||| ||||||||||||||||| |||||||| Sbjct: 1286 aaaccagaatgtccgccttagtaacgcaaacattggtgagaatctaatgcccc 1338
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 525 bits (265), Expect = e-146 Identities = 384/421 (91%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 927 caaatcgaggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcgg 986 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 987 ccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagc 1046 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct: 1047 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagccaagag 1106 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| || Sbjct: 1107 gtttgcctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctct 1166 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1167 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatc 1226 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||| ||||| ||||||||| |||| ||| |||| |||||| | | Sbjct: 1227 cgtaggggagcgttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg 1286 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacatt-ggtgagaatccaatgccccgaaaac 420 | | | |||||| ||||||||| ||||||| ||||||||||||||||||| ||||| Sbjct: 1287 at-ctaaaatgtccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaac 1345 Query: 421 c 421 | Sbjct: 1346 c 1346
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 523 bits (264), Expect = e-145 Identities = 315/332 (94%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 913 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 972 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 973 ccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagc 1032 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1033 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 1092 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1093 gtttgcctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1152 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 1153 tgcgccgaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaacatc 1212 Query: 302 ggtaggggagcgttccgccttagagggaagca 333 ||||||||||||||||| |||| |||||||| Sbjct: 1213 ggtaggggagcgttccgtgttagggggaagca 1244
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 517 bits (261), Expect = e-144 Identities = 325/345 (94%), Gaps = 1/345 (0%) Strand = Plus / Plus Query: 80 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 140 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 199 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 200 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 259 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 260 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 319 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 320 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 379 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 380 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaa 600
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 511 bits (258), Expect = e-142 Identities = 319/338 (94%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 888 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 947 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 948 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1007 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| Sbjct: 1008 taaggcccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagccaggag 1067 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1068 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1127 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1128 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatc 1187 Query: 302 ggta-ggggagcgttccgccttagagggaagcaaccgc 338 ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 1188 cgtatgggaagcgttccgtgttagggggaagcatccgc 1225
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 500 bits (252), Expect = e-138 Identities = 333/360 (92%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 145258 Score = 500 bits (252), Expect = e-138 Identities = 333/360 (92%) Strand = Plus / Minus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 87593 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagat 30 ||||||||||||||||||||||||||||| Sbjct: 144832 caaatcgaggcaaactctgaatactagat 144860 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagat 30 ||||||||||||||||||||||||||||| Sbjct: 88019 caaatcgaggcaaactctgaatactagat 87991
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 500 bits (252), Expect = e-138 Identities = 333/360 (92%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1314 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagata 31 ||||||||||||||||||||||||| |||| Sbjct: 896 caaatcgaggcaaactctgaatactggata 925
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 496 bits (250), Expect = e-137 Identities = 338/366 (92%), Gaps = 1/366 (0%) Strand = Plus / Minus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 416 aaaacc 421 |||||| Sbjct: 114887 aaaacc 114882 Score = 496 bits (250), Expect = e-137 Identities = 338/366 (92%), Gaps = 1/366 (0%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 416 aaaacc 421 |||||| Sbjct: 87233 aaaacc 87238 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||||||||||||||||||||| Sbjct: 115301 caaatcgaggcaaactctgaatactag 115275 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||||||||||||||||||||| Sbjct: 86819 caaatcgaggcaaactctgaatactag 86845
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 494 bits (249), Expect = e-136 Identities = 379/421 (90%), Gaps = 1/421 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg-gtcaaggtcg 60 ||||||||||||||||||||||||| |||| ||| | ||||| || | || | |||| Sbjct: 914 caaatcgaggcaaactctgaatactggataggactccctaataatagagagtaagggtca 973 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| | Sbjct: 974 accagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccgg 1033 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||| Sbjct: 1034 ctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccagga 1093 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1094 ggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1153 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1154 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 1213 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 |||||||||||||||||||||||| | |||||| | ||| ||| || || ||||||||| Sbjct: 1214 cggtaggggagcgttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcg 1273 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1274 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1333 Query: 421 c 421 | Sbjct: 1334 c 1334
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 488 bits (246), Expect = e-135 Identities = 249/250 (99%) Strand = Plus / Minus Query: 175 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 235 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 295 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 415 gaaaacccaa 424 |||||||||| Sbjct: 20630 gaaaacccaa 20621
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 484 bits (244), Expect = e-133 Identities = 312/335 (93%), Gaps = 6/335 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| | |||||||| |||||||| Sbjct: 927 caaatcgaggcaaactctgaatactagatatgacc------tcacaggggttaaggtcgg 980 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 981 ccaatgagacgatgggggataagcttcatcttccagagggaaacagcccggatcaccagc 1040 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 1041 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgag 1100 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1101 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1160 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| || |||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1161 tgcgcccaaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatc 1220 Query: 302 ggtaggggagcgttccgccttagagggaagcaacc 336 ||||||||||||||||||| || |||||| ||||| Sbjct: 1221 ggtaggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 389 aaacattggtgagaatccaatgccccgaaaa 419 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 478 bits (241), Expect = e-132 Identities = 294/309 (95%), Gaps = 2/309 (0%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt-caaggtcg 60 ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 177750 caaatcgaggcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcg 177809 Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 177810 gctagtgagacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccag 177869 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 177870 ctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccagga 177929 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 177930 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 177989 Query: 241 ttgcgctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgca 299 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 177990 ttgcgccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaataca 178049 Query: 300 tcggtaggg 308 |||| |||| Sbjct: 178050 tcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 170 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 170 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 aggcccctaaatgaccgctcag 145 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 gtcgagagggaaacagcccggatc 115 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 gtcgagagggaaacagcccggatc 115 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 472 bits (238), Expect = e-130 Identities = 238/238 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 771 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 831 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 891 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 468 bits (236), Expect = e-129 Identities = 260/268 (97%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct: 122299 caaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcgg 122240 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 122239 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagc 122180 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122179 taaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggag 122120 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122119 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgccct 122060 Query: 242 tgcgctgaagatgaacggggctaagcga 269 |||||||||||||||||||||||||||| Sbjct: 122059 tgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 468 bits (236), Expect = e-129 Identities = 260/268 (97%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct: 12824840 caaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcgg 12824781 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 12824780 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagc 12824721 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12824720 taaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggag 12824661 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12824660 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgccct 12824601 Query: 242 tgcgctgaagatgaacggggctaagcga 269 |||||||||||||||||||||||||||| Sbjct: 12824600 tgcgctgaagatgaacggggctaagcga 12824573
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 468 bits (236), Expect = e-129 Identities = 374/420 (89%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||| |||||||| || ||| ||| | |||| Sbjct: 127531 caaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaa 127472 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| Sbjct: 127471 ccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagc 127412 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||| Sbjct: 127411 taaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 127352 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 127351 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctct 127292 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 | ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| |||| Sbjct: 127291 tacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatc 127232 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||| | ||| |||||| ||| ||| || || |||||||||| Sbjct: 127231 ggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcgg 127172 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 127171 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 127112 Score = 468 bits (236), Expect = e-129 Identities = 374/420 (89%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||| |||||||| || ||| ||| | |||| Sbjct: 95916 caaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaa 95975 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| Sbjct: 95976 ccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagc 96035 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||| Sbjct: 96036 taaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 96095 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 96096 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctct 96155 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 | ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| |||| Sbjct: 96156 tacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatc 96215 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||| | ||| |||||| ||| ||| || || |||||||||| Sbjct: 96216 ggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcgg 96275 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 96276 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 96335
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 456 bits (230), Expect = e-125 Identities = 371/418 (88%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||| ||||||||||||||||| |||||| || | ||||| ||| ||||||||||||| Sbjct: 2914 caaattgaggcaaactctgaatattagatacgatctcaaaatcacaagggtcaaggtcgg 2855 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 | |||||||||| | |||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 2854 cgagtgagacgacgagggataagcttcatcgtcgagagggaaacaacctggatcaccagc 2795 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2794 taaggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaagacagccaggag 2735 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||| || Sbjct: 2734 gtttgcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaatcgagcgcact 2675 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||| | |||||||| ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 2674 tgcaccaaagatgaattgggctaagcgatctgttgaagctatgggatgtcaaaatgcatc 2615 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 | |||||||||||||||||||||||||||||| | || || | ||| || || |||| Sbjct: 2614 gataggggagcgttccgccttagagggaagcacctgcacgagtagtggtggaagaggcgg 2555 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 ||||| |||||||||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2554 aagcgggaatgtcggcttttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 456 bits (230), Expect = e-125 Identities = 332/366 (90%) Strand = Plus / Minus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 295 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 296 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 355 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 416 aaaacc 421 |||||| Sbjct: 5242 aaaacc 5237 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 5 atcgaggcaaactctgaatactagatatg 33 ||||||||||||| ||||||||||||||| Sbjct: 5635 atcgaggcaaactatgaatactagatatg 5607
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 454 bits (229), Expect = e-124 Identities = 332/366 (90%), Gaps = 4/366 (1%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 298 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 299 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 358 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 419 acccaa 424 |||||| Sbjct: 1272 acccaa 1277 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 ||||||||||||||||||||||||||| |||| Sbjct: 865 caaatcgaggcaaactctgaatactaggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 452 bits (228), Expect = e-124 Identities = 336/371 (90%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 293 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 294 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 353 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 354 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 413 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 414 cgaaaacccaa 424 ||||||||||| Sbjct: 1306 cgaaaacccaa 1316 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||||||||||||||||||||| Sbjct: 909 caaatcgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 452 bits (228), Expect = e-124 Identities = 336/371 (90%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 293 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 294 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 353 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 354 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 413 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 414 cgaaaacccaa 424 ||||||||||| Sbjct: 1319 cgaaaacccaa 1329 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||||||||||||||||||||| Sbjct: 922 caaatcgaggcaaactctgaatactag 948
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 452 bits (228), Expect = e-124 Identities = 330/363 (90%), Gaps = 2/363 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 298 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 299 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 358 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 419 acc 421 ||| Sbjct: 1313 acc 1315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||||||||||||||||||||| Sbjct: 910 caaatcgaggcaaactctgaatactag 936
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 448 bits (226), Expect = e-123 Identities = 272/288 (94%), Gaps = 7/288 (2%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||| || || |||| |||||||||||| Sbjct: 392 caaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcgg 444 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 504 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 505 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 564 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 565 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 624 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 289 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 444 bits (224), Expect = e-121 Identities = 335/371 (90%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 56 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 115 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 116 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 175 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 176 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 235 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 236 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 293 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 294 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 353 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 354 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 413 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 414 cgaaaacccaa 424 ||||||||||| Sbjct: 1423 cgaaaacccaa 1433 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||||||||||||||||||||| Sbjct: 1026 caaatcgaggcaaactctgaatactag 1052
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 442 bits (223), Expect = e-121 Identities = 267/279 (95%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 143 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 202 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 203 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 262 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 263 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 322 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-ctt 178 Query: 323 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 382 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 383 taacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||||| ||||||||||||||||||||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacc 277
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 436 bits (220), Expect = e-119 Identities = 220/220 (100%) Strand = Plus / Plus Query: 205 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 265 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 325 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 385 acgaaaacattggtgagaatccaatgccccgaaaacccaa 424 |||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaa 220
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 436 bits (220), Expect = e-119 Identities = 328/363 (90%), Gaps = 2/363 (0%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 298 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 299 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 358 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 419 acc 421 ||| Sbjct: 123952 acc 123950 Score = 436 bits (220), Expect = e-119 Identities = 328/363 (90%), Gaps = 2/363 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 298 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 299 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 358 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 419 acc 421 ||| Sbjct: 95914 acc 95916 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||| ||||||||||||||||| Sbjct: 124355 caaatcgagtcaaactctgaatactag 124329 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||| ||||||||||||||||| Sbjct: 95511 caaatcgagtcaaactctgaatactag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 432 bits (218), Expect = e-118 Identities = 326/362 (90%), Gaps = 5/362 (1%) Strand = Plus / Plus Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 420 cc 421 || Sbjct: 1355 cc 1356 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac 35 ||||| |||||||||| ||||||||||||||||| Sbjct: 924 caaattgaggcaaactatgaatactagatatgac 957
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 432 bits (218), Expect = e-118 Identities = 379/430 (88%), Gaps = 7/430 (1%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaaggtc 59 |||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| |||||| Sbjct: 138358 caaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtc 138299 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 ||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 138298 ggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcacca 138239 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||| ||||||||||||||| | |||||||| || |||||||||||||| || Sbjct: 138238 gctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccggg 138179 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 ||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 138178 aggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgct 138119 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatg 297 | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | ||| Sbjct: 138118 cctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaata 138059 Query: 298 catcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggtcgac 354 |||||||||||||||||||||||| |||||||||| | ||| ||| || | ||| Sbjct: 138058 catcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggac 137999 Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 137998 gaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 137939 Query: 415 gaaaacccaa 424 |||||||||| Sbjct: 137938 gaaaacccaa 137929 Score = 432 bits (218), Expect = e-118 Identities = 379/430 (88%), Gaps = 7/430 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaaggtc 59 |||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| |||||| Sbjct: 83519 caaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtc 83578 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 ||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 83579 ggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcacca 83638 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||| ||||||||||||||| | |||||||| || |||||||||||||| || Sbjct: 83639 gctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccggg 83698 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 ||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 83699 aggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgct 83758 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatg 297 | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | ||| Sbjct: 83759 cctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaata 83818 Query: 298 catcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggtcgac 354 |||||||||||||||||||||||| |||||||||| | ||| ||| || | ||| Sbjct: 83819 catcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggac 83878 Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83879 gaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 83938 Query: 415 gaaaacccaa 424 |||||||||| Sbjct: 83939 gaaaacccaa 83948
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 420 bits (212), Expect = e-114 Identities = 258/274 (94%), Gaps = 7/274 (2%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||| || || |||| |||||||||||| Sbjct: 408 caaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcgg 460 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 520 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 521 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 580 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 581 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 640 Query: 242 tgcgctgaagatgaacggggctaagcgatctgcc 275 ||||| |||||||||||||||||||||||||||| Sbjct: 641 tgcgccgaagatgaacggggctaagcgatctgcc 674
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 418 bits (211), Expect = e-114 Identities = 211/211 (100%) Strand = Plus / Plus Query: 214 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 274 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 334 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 394 ttggtgagaatccaatgccccgaaaacccaa 424 ||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaa 211
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 416 bits (210), Expect = e-113 Identities = 321/358 (89%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 5362 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 ||||||||||||||||||||||||| Sbjct: 4959 caaatcgaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 416 bits (210), Expect = e-113 Identities = 321/358 (89%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1329 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 ||||||||||||||||||||||||| Sbjct: 926 caaatcgaggcaaactctgaatact 950
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 408 bits (206), Expect = e-111 Identities = 320/358 (89%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaacc 1324 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagata 31 ||||||||| ||||||||||||||| |||| Sbjct: 921 caaatcgagacaaactctgaatactggata 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 408 bits (206), Expect = e-111 Identities = 320/358 (89%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1329 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 ||||||||||||||||||||||||| Sbjct: 926 caaatcgaggcaaactctgaatact 950
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 406 bits (205), Expect = e-110 Identities = 327/367 (89%), Gaps = 3/367 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 297 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 298 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 357 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 358 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 418 aacccaa 424 ||||||| Sbjct: 1275 aacccaa 1281 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatga 34 ||||| || ||||||||||||||||| |||||| Sbjct: 872 caaattgatgcaaactctgaatactaaatatga 904
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 369 bits (186), Expect = 5e-99 Identities = 290/324 (89%), Gaps = 8/324 (2%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacc--caaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||||||||||||||| |||||||||||||| | ||||| Sbjct: 911 caaattgaggcaaactatgaatactagatatgacctccaaaaataacagggataaaggtg 970 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 971 gaccagtgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatcacca 1030 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 1031 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccagg 1090 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1091 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1150 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 ||||||| ||| ||||| ||| ||||||| | |||||||||||||||||| | | Sbjct: 1151 cttgcgccgaatatgaatgggaataagcgacccgccgaagctgtgggatgtaa------a 1204 Query: 300 tcggtaggggagcgttccgcctta 323 ||||||||||||||||| |||||| Sbjct: 1205 tcggtaggggagcgttctgcctta 1228 Score = 109 bits (55), Expect = 7e-21 Identities = 64/67 (95%) Strand = Plus / Plus Query: 355 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 414 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 415 gaaaacc 421 ||||||| Sbjct: 1330 gaaaacc 1336
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 363 bits (183), Expect = 3e-97 Identities = 319/364 (87%), Gaps = 4/364 (1%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 297 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 298 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 357 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 358 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 418 aacc 421 |||| Sbjct: 1312 aacc 1315 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactaga 29 |||||||| ||||||||||||||||||| Sbjct: 909 caaatcgatgcaaactctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 363 bits (183), Expect = 3e-97 Identities = 319/364 (87%), Gaps = 4/364 (1%) Strand = Plus / Minus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 297 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 298 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 357 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 358 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 418 aacc 421 |||| Sbjct: 114350 aacc 114347 Score = 363 bits (183), Expect = 3e-97 Identities = 319/364 (87%), Gaps = 4/364 (1%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 297 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 298 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 357 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 358 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 418 aacc 421 |||| Sbjct: 87638 aacc 87641 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatactaga 29 |||||||| ||||||||||||||||||| Sbjct: 114753 caaatcgatgcaaactctgaatactaga 114726 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactaga 29 |||||||| ||||||||||||||||||| Sbjct: 87235 caaatcgatgcaaactctgaatactaga 87262
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 5e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 26 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 85 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 86 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 145 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 146 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 205 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 206 taaagagtgcgtaatagctca 226 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 5e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 26 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 85 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 86 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 145 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 146 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 205 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 206 taaagagtgcgtaatagctca 226 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 886 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 945 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 946 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1005 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1006 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1065 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1066 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1125 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1126 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1180 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1181 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1240 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1241 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1300 Query: 420 cc 421 || Sbjct: 1301 cc 1302
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 886 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 945 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 946 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1005 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1006 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1065 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1066 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1125 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1126 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1180 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1181 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1240 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1241 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1300 Query: 420 cc 421 || Sbjct: 1301 cc 1302
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 886 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 945 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 946 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1005 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1006 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1065 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1066 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1125 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1126 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1180 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1181 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1240 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1241 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1300 Query: 420 cc 421 || Sbjct: 1301 cc 1302
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 355 bits (179), Expect = 7e-95 Identities = 362/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 7e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 82 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 141 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 142 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 201 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 202 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 262 ctaagcgatctgccgaagctgtgggatgtcaaaat 296 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 7e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 82 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 141 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 142 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 201 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 202 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 262 ctaagcgatctgccgaagctgtgggatgtcaaaat 296 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 351 bits (177), Expect = 1e-93 Identities = 315/361 (87%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Query: 421 c 421 | Sbjct: 4345 c 4345 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 |||||||| ||||||||||||||||| ||||| Sbjct: 3944 caaatcgatgcaaactctgaatactaaatatg 3975
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 347 bits (175), Expect = 2e-92 Identities = 361/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| |||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 347 bits (175), Expect = 2e-92 Identities = 361/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | | ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagcttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 347 bits (175), Expect = 2e-92 Identities = 361/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaggtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 347 bits (175), Expect = 2e-92 Identities = 361/422 (85%), Gaps = 7/422 (1%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtc 59 ||||| |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 887 caaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtg 946 Query: 60 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 119 | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct: 947 gaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcacta 1006 Query: 120 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 179 |||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||||| Sbjct: 1007 gctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccagg 1066 Query: 180 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 239 | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || Sbjct: 1067 aagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgct 1126 Query: 240 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 299 |||| || ||| ||||||||| || || ||| ||||||| ||||||||| | || Sbjct: 1127 cttgtgccgaatatgaacgggaataggcaatccaccgaagccgtgggatgtaa-----ca 1181 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 |||| |||||||||||| |||||| | ||||||| | || || | ||| || ||||| Sbjct: 1182 tcggcaggggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaagc 1241 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1242 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1301 Query: 420 cc 421 || Sbjct: 1302 cc 1303
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 347 bits (175), Expect = 2e-92 Identities = 199/207 (96%) Strand = Plus / Plus Query: 215 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 274 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 275 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 334 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 335 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 394 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 395 tggtgagaatccaatgccccgaaaacc 421 ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacc 961
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 343 bits (173), Expect = 3e-91 Identities = 315/361 (87%), Gaps = 1/361 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Query: 421 c 421 | Sbjct: 1310 c 1310 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 |||||||| ||||||||||||||||| ||||| Sbjct: 910 caaatcgatgcaaactctgaatactaaatatg 941
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 341 bits (172), Expect = 1e-90 Identities = 313/360 (86%), Gaps = 5/360 (1%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 2859 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 |||||||| |||||||||||||||| Sbjct: 2466 caaatcgatgcaaactctgaatact 2490
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 335 bits (169), Expect = 7e-89 Identities = 313/361 (86%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Query: 421 c 421 | Sbjct: 1311 c 1311 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatg 33 |||||||| ||||||||||||||||| ||||| Sbjct: 910 caaatcgatgcaaactctgaatactaaatatg 941
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 89 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 148 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 149 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 208 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 209 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 268 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 269 atctgccgaagctgtgggat 288 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 315 bits (159), Expect = 6e-83 Identities = 162/163 (99%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 881 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 941 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggt 164 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 942 taaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 133 bits (67), Expect = 5e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 299 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 358 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 419 acc 421 ||| Sbjct: 1721 acc 1723 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatga 34 |||||||||||||||||||||||||||| |||| Sbjct: 1313 caaatcgaggcaaactctgaatactagacatga 1345
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 301 bits (152), Expect = 1e-78 Identities = 313/364 (85%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 242 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Query: 421 ccaa 424 |||| Sbjct: 1301 ccaa 1304 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 ||||||||||||||||||||||||| Sbjct: 899 caaatcgaggcaaactctgaatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 301 bits (152), Expect = 1e-78 Identities = 313/364 (85%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 242 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Query: 421 ccaa 424 |||| Sbjct: 1314 ccaa 1317 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 ||||||||||||||||||||||||| Sbjct: 912 caaatcgaggcaaactctgaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 301 bits (152), Expect = 1e-78 Identities = 313/364 (85%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 242 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 300 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Query: 421 ccaa 424 |||| Sbjct: 5888 ccaa 5891 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatact 26 ||||||||||||||||||||||||| Sbjct: 5486 caaatcgaggcaaactctgaatact 5510
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 295 bits (149), Expect = 6e-77 Identities = 308/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 190229 Score = 295 bits (149), Expect = 6e-77 Identities = 308/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 151656 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 |||||||||||||||||||||||| Sbjct: 189833 caaatcgaggcaaactctgaatac 189856 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 |||||||||||||||||||||||| Sbjct: 151260 caaatcgaggcaaactctgaatac 151283
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 9e-76 Identities = 207/227 (91%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 123 bits (62), Expect = 5e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 416 aaaacc 421 |||||| Sbjct: 1359 aaaacc 1364 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 atcggtaggggagcgttccgc 319 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 281 bits (142), Expect = 9e-73 Identities = 142/142 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 766 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 826 Query: 122 taaggcccctaaatgaccgctc 143 |||||||||||||||||||||| Sbjct: 827 taaggcccctaaatgaccgctc 848
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 6e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 58 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 117 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 118 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 177 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 178 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 237 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 238 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 297 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 298 catcggtaggggagcgttccgc 319 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 412 cccgaaaacc 421 ||||||||| Sbjct: 1300 tccgaaaacc 1309
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 276 bits (139), Expect = 6e-71 Identities = 304/358 (84%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 189306 Score = 276 bits (139), Expect = 6e-71 Identities = 304/358 (84%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 150863 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatacta 27 |||||||||||||||||||||||||| Sbjct: 188910 caaatcgaggcaaactctgaatacta 188935 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatacta 27 |||||||||||||||||||||||||| Sbjct: 150467 caaatcgaggcaaactctgaatacta 150492
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 9e-70 Identities = 203/225 (90%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaa 391 |||| ||||||||||||||||||| |||||| Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaa 903 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 531 caaatcgagacaaactctgaatac 554
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 1e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 299 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 358 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 419 acc 421 ||| Sbjct: 1530 acc 1532
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 1e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1328 cccgaaaacc 1337 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 atcggtaggggagcgttccgc 319 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 8e-67 Identities = 201/224 (89%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 147 bits (74), Expect = 3e-32 Identities = 107/118 (90%) Strand = Plus / Plus Query: 301 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 360 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1309 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 caaactctgaatactagata 31 |||||||||||||||||||| Sbjct: 915 caaactctgaatactagata 934
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 258 bits (130), Expect = 1e-65 Identities = 304/361 (84%), Gaps = 2/361 (0%) Strand = Plus / Minus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 423 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 17735 Query: 424 a 424 | Sbjct: 17734 a 17734 Score = 258 bits (130), Expect = 1e-65 Identities = 304/361 (84%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 303 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 304 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 363 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 364 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 423 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 3131 Query: 424 a 424 | Sbjct: 3132 a 3132 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatacta 27 |||||| ||||||||||||||||||| Sbjct: 18134 caaatcaaggcaaactctgaatacta 18109 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatacta 27 |||||| ||||||||||||||||||| Sbjct: 2732 caaatcaaggcaaactctgaatacta 2757
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 254 bits (128), Expect = 2e-64 Identities = 128/128 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 974 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1034 Query: 122 taaggccc 129 |||||||| Sbjct: 1035 taaggccc 1042
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 8e-64 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 299 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 300 tcggtaggggagcgttccg 318 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 69.9 bits (35), Expect = 6e-09 Identities = 60/67 (89%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 417 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 418 aacccaa 424 | ||||| Sbjct: 1312 agcccaa 1318
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 3e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 283 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 3e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 283 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 3e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 300 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 301 cggtaggggagcgttccg 318 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 89.7 bits (45), Expect = 7e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 366 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3007
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 3e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 283 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 1e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 358 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 406 ||||||| ||||||||||||||||||| || ||| | ||||||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcc 911 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 529 caaatcgagacaaactctgaatac 552
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 1e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 286 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 123 bits (62), Expect = 5e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 416 aaaacc 421 |||||| Sbjct: 1454 aaaacc 1459
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 246 bits (124), Expect = 5e-62 Identities = 320/384 (83%), Gaps = 6/384 (1%) Strand = Plus / Plus Query: 38 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 97 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 98 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 157 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 158 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 217 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 218 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 277 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 278 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 337 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 338 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 397 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 398 tgagaatccaatgccccgaaaacc 421 ||||||||||| |||| |||||| Sbjct: 1298 cgagaatccaattccccaaaaacc 1321 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgac 35 ||||| |||||| ||| ||||||||||||||||| Sbjct: 899 caaattgaggcagactatgaatactagatatgac 932
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 5e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1342 cccgaaaacc 1351
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 3111 cccgaaaacc 3120
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 421 ccaa 424 |||| Sbjct: 2838 ccaa 2841
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 412 cccgaaa 418 ||||||| Sbjct: 919 cccgaaa 925
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1298 cccgaaaacc 1307 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagata 31 ||||||| |||||||||||||||||||||| Sbjct: 902 caaatcgtggcaaactctgaatactagata 931
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 26107 cccgaaaacc 26116 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagata 31 ||||||| |||||||||||||||||||||| Sbjct: 25711 caaatcgtggcaaactctgaatactagata 25740
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 241 ttgcgctgaagatgaacggggctaag 266 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 412 cccgaaa 418 || |||| Sbjct: 920 cctgaaa 926 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagat 30 ||||||||| |||||||||||||| |||| Sbjct: 528 caaatcgagtcaaactctgaataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 7e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 296 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 297 gcatcggtaggggagcgttccg 318 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 412 cccgaaa 418 ||||||| Sbjct: 921 cccgaaa 927
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 3e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 421 ccaa 424 |||| Sbjct: 921 ccaa 924
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 3e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 412 cccgaaa 418 ||||||| Sbjct: 919 cccgaaa 925 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 atcggtaggggagcgttccg 318 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 528 caaatcgagacaaactctgaatac 551
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 3e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 109 bits (55), Expect = 7e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 422 caa 424 ||| Sbjct: 2050553 caa 2050551 Score = 109 bits (55), Expect = 7e-21 Identities = 106/123 (86%) Strand = Plus / Plus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 422 caa 424 ||| Sbjct: 1450948 caa 1450950
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 137800 cccgaaaacc 137809 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 47744 cccgaaaacc 47735
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 226 bits (114), Expect = 5e-56 Identities = 303/362 (83%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 120 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 241 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 299 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 300 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 359 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 360 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 419 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 420 cc 421 || Sbjct: 1312 cc 1313 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactag 28 ||||||||| ||||||||||||||||| Sbjct: 909 caaatcgagacaaactctgaatactag 935
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 242 tgcgctgaagatgaacggggctaag 266 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 406 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcc 911 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 529 caaatcgagacaaactctgaatac 552
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 286 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1492 cccgaaaacc 1501
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 7e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 421 ccaa 424 |||| Sbjct: 2837 ccaa 2840
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 7e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagta 384 |||||| ||||||||||||||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagta 893
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 7e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 7e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 3328319 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 2450409
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 412 cccgaaaacccaa 424 ||||||||||||| Sbjct: 2313589 cccgaaaacccaa 2313601 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 412 cccgaaaacccaa 424 ||||||||||||| Sbjct: 1108258 cccgaaaacccaa 1108246
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 3e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 115 bits (58), Expect = 1e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 356 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 415 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 416 aaaacc 421 |||||| Sbjct: 1296 aaaacc 1301 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 atcggtaggggagcgttccg 318 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 241 ttgcgctgaagatgaacggggctaag 266 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 412 cccgaaa 418 || |||| Sbjct: 918 cctgaaa 924 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagat 30 ||||||||| |||||||||||||| |||| Sbjct: 528 caaatcgagtcaaactctgaataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 4e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 412 cccgaaaacccaa 424 ||||||| ||||| Sbjct: 2333521 cccgaaaccccaa 2333509 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 2333909 caaatcgagtcaaactctgaatac 2333886
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 4e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 254 gaacggggctaagcgatctgccgaagctgtgggatgt 290 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 412 cccgaaaacccaa 424 ||||||||||||| Sbjct: 1786 cccgaaaacccaa 1798
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagta 384 |||||| |||||| ||||||||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagta 893 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 528 caaatcgagacaaactctgaatac 551
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagct 281 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 129 bits (65), Expect = 8e-27 Identities = 104/117 (88%) Strand = Plus / Plus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1324
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagct 281 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 129 bits (65), Expect = 8e-27 Identities = 104/117 (88%) Strand = Plus / Plus Query: 302 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 361 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 362 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3206
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 214 bits (108), Expect = 2e-52 Identities = 298/359 (83%), Gaps = 3/359 (0%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 302 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 303 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 362 |||||||||||||| | |||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctg-cttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 363 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 421 || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaacc 2995
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 7e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 254 gaacggggctaagcgatctgccgaagctgtgggat 288 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1341 cccgaaaacc 1350
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 420 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 421 ccaa 424 |||| Sbjct: 926 ccaa 929
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 243 gcgctgaagatgaacggggctaagc 267 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 412 cccgaaa 418 |||||| Sbjct: 907 tccgaaa 913
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 412 cccgaaa 418 ||||||| Sbjct: 915 cccgaaa 921
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 4e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 921
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 4e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1321 cccgaaaacc 1330
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 4e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 3059 cccgaaaacc 3068
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 44.1 bits (22), Expect = 0.36 Identities = 49/58 (84%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaa 927
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 288 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 44.1 bits (22), Expect = 0.36 Identities = 49/58 (84%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaa 927
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 7e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacg 387 |||| |||||||||||||||||||||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacg 1285
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 7e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 290 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 7e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 290 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 109 bits (55), Expect = 7e-21 Identities = 61/63 (96%) Strand = Plus / Minus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 419 acc 421 ||| Sbjct: 114116 acc 114114 Score = 109 bits (55), Expect = 7e-21 Identities = 61/63 (96%) Strand = Plus / Plus Query: 359 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 419 acc 421 ||| Sbjct: 3401 acc 3403 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 2 caaatcgaggcaaactctgaatacta 27 |||||||||||||||||||||||||| Sbjct: 114521 caaatcgaggcaaactctgaatacta 114496 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatacta 27 |||||||||||||||||||||||||| Sbjct: 2996 caaatcgaggcaaactctgaatacta 3021 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 catcggtaggggagcgttccg 318 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 catcggtaggggagcgttccg 318 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 285 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 99.6 bits (50), Expect = 7e-18 Identities = 56/58 (96%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 923
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 95 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 154 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 155 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 213 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 214 gcgtaatagctcactg 229 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 95 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 154 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 155 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 213 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 214 gcgtaatagctcactg 229 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 172 bits (87), Expect = 6e-40 Identities = 96/99 (96%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 61 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 365090 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 365149 Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagg 100 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 365150 ccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 170 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 229 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 gtcgagagggaaacagcccggatc 115 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 4e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 243 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 301 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 302 ggtaggggagcgttc 316 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 412 cccgaaaacccaa 424 ||||||||||||| Sbjct: 3041 cccgaaaacccaa 3053
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 4e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 254 gaacggggctaagcgatctgccgaagctgtgggat 288 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 4e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 254 gaacggggctaagcgatctgccgaagctgtgggat 288 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 347 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 406 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 407 aatgccccgaaaacc 421 |||| |||||||||| Sbjct: 193167 aatgtcccgaaaacc 193181 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 347 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 406 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 407 aatgccccgaaaacc 421 |||| |||||||||| Sbjct: 143615 aatgtcccgaaaacc 143601
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 4e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 241 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 287 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 113 bits (57), Expect = 5e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 358 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 417 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 418 a 418 | Sbjct: 1335 a 1335 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 tcggtaggggagcgttccgcc 320 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 241 ttgcgctgaagatgaacggggctaag 266 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 241 ttgcgctgaagatgaacggggctaag 266 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 412 cccgaaaacccaa 424 ||||||| ||||| Sbjct: 1659793 cccgaaatcccaa 1659805 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 412 cccgaaaacccaa 424 ||||||| ||||| Sbjct: 1048951 cccgaaatcccaa 1048939
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 62 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 121 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 122 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 181 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 182 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 241 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 242 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 301 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 302 ggtaggggagcgttccgc 319 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 412 cccgaaaacc 421 |||||||||| Sbjct: 1285 cccgaaaacc 1294
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 241 ttgcgctgaagatgaacggggctaag 266 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 412 cccgaaaacccaa 424 ||||||| ||||| Sbjct: 1555 cccgaaatcccaa 1567
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 241 ttgcgctgaagatgaacggggctaag 266 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 61 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 120 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 121 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 180 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 181 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 240 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 241 ttgcgctgaagatgaacggggctaag 266 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 412 cccgaaaacccaa 424 ||||||| ||||| Sbjct: 2656993 cccgaaatcccaa 2656981 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 412 cccgaaaacccaa 424 ||||||| ||||| Sbjct: 571928 cccgaaatcccaa 571940
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 6e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||| |||| ||||||||| |||||||||||||||||| ||| ||||| ||| Sbjct: 1255 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaacagcagtgtgaatctgctgc 1314 Query: 412 cccgaaaacccaa 424 ||||||||||||| Sbjct: 1315 cccgaaaacccaa 1327
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 6e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 63 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 122 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 123 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 182 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 183 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 242 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 243 gcgctgaagatgaacggggctaagc 267 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 412 cccgaaa 418 |||||| Sbjct: 1569479 tccgaaa 1569473
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 192 bits (97), Expect = 6e-46 Identities = 181/209 (86%) Strand = Plus / Plus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3351 Query: 254 gaacggggctaagcgatctgccgaagctg 282 ||||||||||||||| | | ||||||||| Sbjct: 3352 gaacggggctaagcgttttaccgaagctg 3380 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 3453 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 3510 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caaatcgaggcaaactctgaatac 25 ||||||||| |||||||||||||| Sbjct: 3121 caaatcgagacaaactctgaatac 3144
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 320733 Query: 254 gaacggggctaagcgatctgccgaagctg 282 ||||||||||||||| | | ||||||||| Sbjct: 320734 gaacggggctaagcgttataccgaagctg 320762 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 320838 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 320895
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Minus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 2137650 Query: 254 gaacggggctaag 266 ||||||||||||| Sbjct: 2137649 gaacggggctaag 2137637 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Plus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 477210 Query: 254 gaacggggctaag 266 ||||||||||||| Sbjct: 477211 gaacggggctaag 477223 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| Sbjct: 2137551 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcaccgaaa 2137494 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| Sbjct: 477309 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcaccgaaa 477366
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Minus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 19784 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 19783 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 19724 Query: 254 gaacggggctaagcgatctgccgaagctg 282 ||||||||||||||| | | ||||||||| Sbjct: 19723 gaacggggctaagcgttataccgaagctg 19695 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 19619 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 19562
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Minus Query: 74 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 134 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 193 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 1538 Query: 194 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 253 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 1537 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 1478 Query: 254 gaacggggctaagcgatctgccgaagctg 282 ||||||||||||||| | | ||||||||| Sbjct: 1477 gaacggggctaagcgttataccgaagctg 1449 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 361 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 418 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 1373 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 1316
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 64 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 123 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 958 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1017 Query: 124 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 183 |||||||||||| | || |||| |||||||||||| |||| |||||||||| |||| Sbjct: 1018 aggcccctaaataagtactaagtggcaaaggaggtgggagtgctaagacagccaaaaggt 1077 Query: 184 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 243 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1078 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1137 Query: 244 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 284 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1138 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1178 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 352 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 411 |||||||| |||| ||||||||| |||||||||||||||||| ||| ||||| ||| Sbjct: 1248 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaacagcagtgtgaatctgctgc 1307 Query: 412 cccgaaaacccaa 424 ||||||||||||| Sbjct: 1308 cccgaaaacccaa 1320 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,675,442 Number of Sequences: 3902068 Number of extensions: 2675442 Number of successful extensions: 47649 Number of sequences better than 10.0: 2337 Number of HSP's better than 10.0 without gapping: 2364 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 37180 Number of HSP's gapped (non-prelim): 9904 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
