Clone Name | basdg10 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 319 bits (161), Expect = 5e-84 Identities = 227/249 (91%) Strand = Plus / Plus Query: 218 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 277 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 222 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 281 Query: 278 gatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttgga 337 |||||||| || | ||||||||| ||| |||||| |||||||| || || ||||||||| Sbjct: 282 gatggctcggctatcaagaagcttcagactggagtaaacaagcttgctgaccttgttgga 341 Query: 338 gttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaag 397 |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 342 gttacactgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcccctagg 401 Query: 398 attgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaat 457 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 402 attgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcctgttgaaaat 461 Query: 458 attggagct 466 ||||||||| Sbjct: 462 attggagct 470 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 87 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 146 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 82 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 141 Query: 147 ctggccttgtatcagacaagaagccat 173 | || ||||||||||||||||||||| Sbjct: 142 ccggaattgtatcagacaagaagccat 168
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 319 bits (161), Expect = 5e-84 Identities = 227/249 (91%) Strand = Plus / Plus Query: 218 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 277 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 222 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 281 Query: 278 gatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttgga 337 |||||||| || | ||||||||| ||| |||||| |||||||| || || ||||||||| Sbjct: 282 gatggctcggctatcaagaagcttcagactggagtaaacaagcttgctgaccttgttgga 341 Query: 338 gttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaag 397 |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 342 gttacactgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcccctagg 401 Query: 398 attgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaat 457 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 402 attgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcctgttgaaaat 461 Query: 458 attggagct 466 ||||||||| Sbjct: 462 attggagct 470 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 87 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 146 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 82 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 141 Query: 147 ctggccttgtatcagacaagaagccat 173 | || ||||||||||||||||||||| Sbjct: 142 ccggaattgtatcagacaagaagccat 168
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 281 bits (142), Expect = 1e-72 Identities = 226/254 (88%) Strand = Plus / Plus Query: 213 atgtgcgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttca 272 |||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||| Sbjct: 357 atgtgcgccttcagaggagggctaacttcagagtaaaagcggctaaggagctgtacttca 416 Query: 273 acaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttg 332 |||||||||| ||||| | ||||||||||||| ||||||||| ||||| ||||| || | Sbjct: 417 acaaggatgggtcagctatcaagaagctccagactggagtcaataagcttgcagacctag 476 Query: 333 ttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctccc 392 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 477 ttggagttacactcggaccaaagggaaggaatgtcgttttggagagcaagtacggctctc 536 Query: 393 ctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttg 452 | |||||||| || ||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 537 ccaagattgttaacgatggcgttacagttgcaagagaggttgagctggaggaccctgtgg 596 Query: 453 aaaatattggagct 466 |||| ||||||||| Sbjct: 597 aaaacattggagct 610
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 234 bits (118), Expect = 2e-58 Identities = 133/138 (96%) Strand = Plus / Plus Query: 329 cttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggc 388 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 1 cttgttggagttacactgggaccaaagggaaggaatgttgttttggagagcaagtatggg 60 Query: 389 tcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcct 448 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 tcccctaggattgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcct 120 Query: 449 gttgaaaatattggagct 466 |||||||||||||||||| Sbjct: 121 gttgaaaatattggagct 138
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 186 bits (94), Expect = 4e-44 Identities = 118/126 (93%) Strand = Plus / Minus Query: 307 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 366 |||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||| Sbjct: 814137 tggagtaaacaagcttgctgaccttgttggagttacactgggaccaaagggaaggaatgt 814078 Query: 367 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaag 426 |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 814077 tgttttggagagcaagtatgggtcccctaggattgtcaatgatggtgttacagttgcaag 814018 Query: 427 agaggt 432 |||||| Sbjct: 814017 agaggt 814012 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 218 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 277 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 814321 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 814262 Query: 278 gatggctcagccaccaagaagctccaggt 306 |||||||| || | ||||||||| ||||| Sbjct: 814261 gatggctcggctatcaagaagcttcaggt 814233 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 87 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 146 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 814461 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 814402 Query: 147 ctggccttgtatcagacaagaagccat 173 | || ||||||||||||||||||||| Sbjct: 814401 ccggaattgtatcagacaagaagccat 814375 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 429 aggttgagctggaggatcctgttgaaaatattggagct 466 ||||||| |||||||||||||||||||||||||||||| Sbjct: 813584 aggttgaactggaggatcctgttgaaaatattggagct 813547
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 186 bits (94), Expect = 4e-44 Identities = 118/126 (93%) Strand = Plus / Minus Query: 307 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 366 |||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||| Sbjct: 97271 tggagtaaacaagcttgctgaccttgttggagttacactgggaccaaagggaaggaatgt 97212 Query: 367 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaag 426 |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 97211 tgttttggagagcaagtatgggtcccctaggattgtcaatgatggtgttacagttgcaag 97152 Query: 427 agaggt 432 |||||| Sbjct: 97151 agaggt 97146 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 218 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 277 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 97455 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 97396 Query: 278 gatggctcagccaccaagaagctccaggt 306 |||||||| || | ||||||||| ||||| Sbjct: 97395 gatggctcggctatcaagaagcttcaggt 97367 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 87 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 146 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 97595 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 97536 Query: 147 ctggccttgtatcagacaagaagccat 173 | || ||||||||||||||||||||| Sbjct: 97535 ccggaattgtatcagacaagaagccat 97509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 429 aggttgagctggaggatcctgttgaaaatattggagct 466 ||||||| |||||||||||||||||||||||||||||| Sbjct: 96718 aggttgaactggaggatcctgttgaaaatattggagct 96681
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 149 bits (75), Expect = 9e-33 Identities = 201/243 (82%) Strand = Plus / Plus Query: 223 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 282 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 221 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 280 Query: 283 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 342 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 281 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 340 Query: 343 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 402 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 341 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 400 Query: 403 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 401 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 460 Query: 463 agc 465 ||| Sbjct: 461 agc 463
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 149 bits (75), Expect = 9e-33 Identities = 201/243 (82%) Strand = Plus / Plus Query: 223 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 282 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 241 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 300 Query: 283 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 342 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 301 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 360 Query: 343 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 402 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 361 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 420 Query: 403 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 421 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 480 Query: 463 agc 465 ||| Sbjct: 481 agc 483
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 149 bits (75), Expect = 9e-33 Identities = 201/243 (82%) Strand = Plus / Plus Query: 223 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 282 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 220 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 279 Query: 283 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 342 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 280 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 339 Query: 343 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 402 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 340 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 399 Query: 403 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 400 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 459 Query: 463 agc 465 ||| Sbjct: 460 agc 462
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 149 bits (75), Expect = 9e-33 Identities = 201/243 (82%) Strand = Plus / Plus Query: 223 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 282 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 241 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 300 Query: 283 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 342 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 301 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 360 Query: 343 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 402 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 361 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 420 Query: 403 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 421 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 480 Query: 463 agc 465 ||| Sbjct: 481 agc 483
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 141 bits (71), Expect = 2e-30 Identities = 71/71 (100%) Strand = Plus / Plus Query: 396 agattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaa 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 agattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaa 64 Query: 456 atattggagct 466 ||||||||||| Sbjct: 65 atattggagct 75
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 326 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 385 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 386 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 445 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 |||||| |||| || || ||||| || ||||| Sbjct: 446 gttgagttggaagacccggttgagaacattgg 477
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 353 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 412 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 413 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 472 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 |||||| |||| || || ||||| || ||||| Sbjct: 473 gttgagttggaagacccggttgagaacattgg 504
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||| || || ||||| | ||||||||||| | ||||| || Sbjct: 302 gtcaacaagcttgcagatctcgtcggggttactcttggaccaaaggggcgaaatgtagtc 361 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | || |||||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct: 362 ctcgaaagcaagtatggctcacctaaaattgtcaatgatggtgtcactgtggcaaaggag 421 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 ||||| || ||||| ||||||||||||||||| Sbjct: 422 gttgaacttgaggaccctgttgaaaatattgg 453
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 223 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 282 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 283 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 342 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 |||||| |||| || || ||||| || ||||| Sbjct: 343 gttgagttggaagacccggttgagaacattgg 374
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 345 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 404 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 405 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 464 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 |||||| |||| || || ||||| || ||||| Sbjct: 465 gttgagttggaagacccggttgagaacattgg 496
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||| || || ||||| | ||||||||||| | ||||| || Sbjct: 429 gtcaacaagcttgcagatctcgtcggggttactcttggaccaaaggggcgaaatgtagtc 488 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | || |||||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct: 489 ctcgaaagcaagtatggctcacctaaaattgtcaatgatggtgtcactgtggcaaaggag 548 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 ||||| || ||||| ||||||||||||||||| Sbjct: 549 gttgaacttgaggaccctgttgaaaatattgg 580
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 359 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 418 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 353 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 412 Query: 419 gttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 || || |||||||||||||| |||||||| ||||| || ||||| Sbjct: 413 gtcgctagagaggttgagcttgaggatccagttgagaacattgg 456
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 359 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 418 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 390 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 449 Query: 419 gttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 || || |||||||||||||| |||||||| ||||| || ||||| Sbjct: 450 gtcgctagagaggttgagcttgaggatccagttgagaacattgg 493
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 87.7 bits (44), Expect = 3e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 310 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 369 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || ||||| ||||||||||| || ||||| |||||| Sbjct: 370 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcgagagag 429 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 |||||| |||| || || ||||| || ||||| Sbjct: 430 gttgagttggaagacccggttgagaacattgg 461
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 87.7 bits (44), Expect = 3e-14 Identities = 158/196 (80%) Strand = Plus / Plus Query: 267 acttcaacaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcag 326 |||||||||||||||| ||||| | ||||||||| ||| ||| || ||||| || || | Sbjct: 213 acttcaacaaggatgggtcagctatcaagaagctacagaatggtgtgaacaaacttgctg 272 Query: 327 atcttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacg 386 |||| ||||||||||| | || ||||| || ||||||||||| | ||||||||||| | Sbjct: 273 atctagttggagttactcttggcccaaaaggcaggaatgttgtccttgagagcaagtatg 332 Query: 387 gctcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatc 446 | | || || ||||| |||||||| ||||| || || ||||||||||| | ||||||| Sbjct: 333 gtgctccaaaaattgttaatgatggagttactgtggccagagaggttgaattagaggatc 392 Query: 447 ctgttgaaaatattgg 462 | || ||||| ||||| Sbjct: 393 cagtagaaaacattgg 408
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 366 ||||||||| ||||| || ||||| |||||||| || | || ||||| ||| ||||||| Sbjct: 159894 tggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgt 159953 Query: 367 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaa 425 ||| | ||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 159954 tgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaa 160012 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 429 aggttgagctggaggatcctgttgaaaatattggagc 465 |||||||||||||||| |||||||||||||||||||| Sbjct: 160199 aggttgagctggaggaccctgttgaaaatattggagc 160235
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 366 ||||||||| ||||| || ||||| |||||||| || | || ||||| ||| ||||||| Sbjct: 108921 tggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgt 108980 Query: 367 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaa 425 ||| | ||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 108981 tgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaa 109039 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 429 aggttgagctggaggatcctgttgaaaatattggagc 465 |||||||||||||||| |||||||||||||||||||| Sbjct: 109226 aggttgagctggaggaccctgttgaaaatattggagc 109262
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 52583 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 52642 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 52643 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 52702 Query: 431 gt 432 || Sbjct: 52703 gt 52704
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 79.8 bits (40), Expect = 7e-12 Identities = 157/196 (80%) Strand = Plus / Plus Query: 267 acttcaacaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcag 326 ||||||| ||||||| || |||| ||||||||||| | || || |||||||| |||| Sbjct: 242 acttcaatcaggatggttctgccattaagaagctccaagcaggtgttaacaagcttgcag 301 Query: 327 atcttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacg 386 |||| || || || || | || ||||| ||||| ||||| ||| | |||||||| || | Sbjct: 302 atctagtaggtgtaactcttggtccaaaaggaagaaatgtagttcttgagagcaaatatg 361 Query: 387 gctcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatc 446 |||| || || ||||| |||||||||||||| || || ||||||||||| || || || | Sbjct: 362 gctctccgaaaattgtaaatgatggtgttactgtggccagagaggttgaactagaagacc 421 Query: 447 ctgttgaaaatattgg 462 ||||||| |||||||| Sbjct: 422 ctgttgagaatattgg 437
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 314 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 373 |||||||| || || |||||||| || ||| | |||||||| || || ||||||||| | Sbjct: 214 aacaagctcgcggaccttgttggtgtcacacttggaccaaaagggagaaatgttgttctt 273 Query: 374 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggtt 433 ||||||||||| || ||||| | ||||| ||||||||||| || ||||| || ||||| Sbjct: 274 gagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagggaggtc 333 Query: 434 gagctggaggatcctgttgaaaatattgg 462 ||| ||||||| || ||||| || ||||| Sbjct: 334 gagttggaggacccggttgagaacattgg 362
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 314 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 373 |||||||| || |||||||| || ||||| | || || || ||||||||||||||| | Sbjct: 329 aacaagcttgcggatcttgtcggggttacgcttggtcctaaaggaaggaatgttgttctt 388 Query: 374 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggtt 433 |||||||| || || || ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 389 gagagcaaatatggttcgcctaaaattgttaatgatggtgtcactgttgctaaagaggtt 448 Query: 434 gagctggaggatcctgttgaaaatattgg 462 ||| |||| || || ||||| || ||||| Sbjct: 449 gagttggaagacccggttgagaacattgg 477
>dbj|AK108892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E06, full insert sequence Length = 2254 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 372 tggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagagg 431 ||||||||||||||||| ||| |||||||| || |||||||| ||| |||| || |||| Sbjct: 296 tggagagcaagtacggcagccccaagattgtgaacgatggtgtcacaattgccagggagg 355 Query: 432 ttgagctggagga 444 ||||||| ||||| Sbjct: 356 ttgagcttgagga 368
>gb|U46137.1|STU46137 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 627 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 350 ccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgat 409 ||||| ||||| ||||| ||| | |||||||| || || || || || ||||| |||||| Sbjct: 382 ccaaaaggaagaaatgtagttcttgagagcaaatatggatctccgaaaattgtaaatgat 441 Query: 410 ggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 462 |||||||| || || ||||||||||| || || || |||||||| |||||||| Sbjct: 442 ggtgttactgtggccagagaggttgaactagaagaccctgttgagaatattgg 494
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 63.9 bits (32), Expect = 4e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 311 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 370 ||||||||||| ||||| || ||||| || ||| | ||||| || || | || |||||| Sbjct: 286 gtcaacaagcttgcagacctagttggtgtgacacttggacctaaagggcgaaacgttgtt 345 Query: 371 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 430 | ||||||||||| || || || | ||||||||||||||||| || |||||||| ||| Sbjct: 346 cttgagagcaagtatggatcaccaagaattgtcaatgatggtgtgactgttgcaagggag 405 Query: 431 gttgagctggaggatcctgttgaaaatattgg 462 ||||| |||| || |||||||| || ||||| Sbjct: 406 gttgaattggaagaccctgttgagaacattgg 437
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 314 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 373 |||||||| || || |||||||| || ||| | |||||||| || || ||||||||| | Sbjct: 43910 aacaagctcgcggaccttgttggtgtcacacttggaccaaaagggagaaatgttgttctt 43969 Query: 374 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggt 432 ||||||||||| || ||||| | ||||| ||||||||||| || ||||| || ||||| Sbjct: 43970 gagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagggaggt 44028
>gb|BT018703.1| Zea mays clone EL01N0515D02.d mRNA sequence Length = 1562 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 213 atgtgcgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttca 272 ||||||||||||| ||||| ||||| ||||| ||||||||||| || | || || | Sbjct: 1097 atgtgcgccttcaaaggaaggtgaacttaagagtaaaagcagctaataagttatagttta 1156 Query: 273 acaaggatggctcagccaccaagaagctccaggt 306 |||||||||||||| | | ||||||||||||||| Sbjct: 1157 acaaggatggctcatctatcaagaagctccaggt 1190
>dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCD7 Length = 87685 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 359 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 418 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 87510 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 87569 Query: 419 gttgcaagagaggt 432 || || |||||||| Sbjct: 87570 gtcgctagagaggt 87583
>gb|AY616039.1| Prototheca wickerhamii plastid 60 kDa chaperonin beta subunit-like mRNA, partial sequence Length = 711 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 372 tggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagagg 431 |||||| ||||||||||||||| |||||||| || ||||| || || || || | |||| Sbjct: 292 tggagaccaagtacggctcccccaagattgtgaacgatggcgtgacggtggctcgcgagg 351 Query: 432 ttgagctggagga 444 | ||||||||||| Sbjct: 352 tggagctggagga 364
>gb|DQ074959.1| Lactobacillus reuteri lr0140 (lr0140) gene, partial cds Length = 873 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 345 tgggaccaaagggaaggaatgttgttttgga 375 |||| ||||||||| |||||||||||||||| Sbjct: 89 tgggtccaaagggacggaatgttgttttgga 119
>emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 on chromosome 20 Contains an autophagy Apg3p/Aut1p-like (APG3) pseudogene, complete sequence Length = 84871 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 tctaccgttgggctcatggcag 140 |||||||||||||||||||||| Sbjct: 43287 tctaccgttgggctcatggcag 43266
>dbj|AB220435.1| Macaca fascicularis mRNA, clone QccE-16790: similar to Homo sapiens kinesin family member 13B (KIF13B), mRNA, NM_015254.2 Length = 1706 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 277 ggatggctcagccaccaagaagctccaggt 306 ||||||||||||||||| |||| ||||||| Sbjct: 386 ggatggctcagccaccacgaagttccaggt 357
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgggaccaaagggaaggaatgttgtt 370 |||||||||||||||| ||||||||| Sbjct: 2553955 tgggaccaaagggaagaaatgttgtt 2553930
>gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7, complete sequence Length = 144928 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 aaggaaaacatggcttcacca 106 ||||||||||||||||||||| Sbjct: 134589 aaggaaaacatggcttcacca 134609
>gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P15, complete sequence Length = 130539 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 aaggaaaacatggcttcacca 106 ||||||||||||||||||||| Sbjct: 36467 aaggaaaacatggcttcacca 36487
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 aaggaaaacatggcttcacca 106 ||||||||||||||||||||| Sbjct: 1448189 aaggaaaacatggcttcacca 1448209
>gb|AC073055.8| Homo sapiens BAC clone RP11-111J8 from 7, complete sequence Length = 87783 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 aagggaaggaatgttgttttg 373 ||||||||||||||||||||| Sbjct: 71972 aagggaaggaatgttgttttg 71952
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 345 tgggaccaaagggaaggaatgttgt 369 |||||||||||||||| |||||||| Sbjct: 1187448 tgggaccaaagggaagaaatgttgt 1187472
>gb|AC152455.1| Pan troglodytes BAC clone RP43-4I15 from chromosome 7, complete sequence Length = 136468 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 aagggaaggaatgttgttttg 373 ||||||||||||||||||||| Sbjct: 41130 aagggaaggaatgttgttttg 41150
>gb|AC131661.4| Mus musculus BAC clone RP23-251N10 from 1, complete sequence Length = 211188 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 attttcattgtcatctatctc 192 ||||||||||||||||||||| Sbjct: 75246 attttcattgtcatctatctc 75226
>gb|AF417583.1| Enterococcus avium ATCC 14025 GroES and GroEL genes, partial cds Length = 1881 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 337 agttacattgggaccaaagggaaggaatgttgtttt 372 ||||||||| |||||||| ||| | ||||||||||| Sbjct: 366 agttacattaggaccaaaaggacgcaatgttgtttt 401
>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence Length = 175836 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 caaagggaaggaatgttgttttgg 374 ||||||||||||| |||||||||| Sbjct: 142199 caaagggaaggaaggttgttttgg 142222
>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence Length = 157233 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 caaagggaaggaatgttgttttgg 374 ||||||||||||| |||||||||| Sbjct: 24872 caaagggaaggaaggttgttttgg 24895
>gb|AC003083.2| Homo sapiens BAC clone CTB-60N22 from 7, complete sequence Length = 136823 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aggaaaacatggcttcacca 106 |||||||||||||||||||| Sbjct: 48952 aggaaaacatggcttcacca 48971
>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete sequence Length = 179396 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aggaaaacatggcttcacca 106 |||||||||||||||||||| Sbjct: 124236 aggaaaacatggcttcacca 124217
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cagacaagaagccattttca 178 |||||||||||||||||||| Sbjct: 176918 cagacaagaagccattttca 176899
>gb|AF067612.2| Caenorhabditis elegans cosmid F55A8, complete sequence Length = 69431 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 taaagcagctaaggagctct 266 |||||||||||||||||||| Sbjct: 66597 taaagcagctaaggagctct 66578
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete sequence Length = 186272 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agccaccaagaagctccagg 305 |||||||||||||||||||| Sbjct: 108076 agccaccaagaagctccagg 108095
>emb|AL389888.8| Human DNA sequence from clone RP11-389K14 on chromosome 9 Contains two olfactory receptor pseudogenes and the 3' end of a novel gene, complete sequence Length = 202874 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 aagcagctaaggagctctacttca 272 |||| ||||||||||||||||||| Sbjct: 86323 aagccgctaaggagctctacttca 86300
>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains the 3' end of the OPHN1 gene for oligophrenin 1, complete sequence Length = 190611 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aggaaaacatggcttcacca 106 |||||||||||||||||||| Sbjct: 89615 aggaaaacatggcttcacca 89634
>emb|AL031281.6|HS224A6 Human DNA sequence from clone RP1-224A6 on chromosome 1p35.1-36.23 Contains the 3' UTR of the ELA3A gene for elastase 3A (pancreatic (protease E)), three novel genes, the CDC42 gene for cell division cycle 42 (GTP binding protein, 25kDa), the 3' end of the WNT4 gene for wingless-type MMTV integration site family (member 4) and a CpG island, complete sequence Length = 129366 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tgttgttttggagagcaagt 383 |||||||||||||||||||| Sbjct: 30261 tgttgttttggagagcaagt 30242
>emb|AJ439087.1|BAP439087 Buchnera aphidicola (Chaetophorus leucomelas) groEL gene Length = 1656 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 337 agttacattgggaccaaagggaaggaatgttgtttt 372 |||||| || |||||||| ||||| ||||||||||| Sbjct: 84 agttactttaggaccaaaaggaagaaatgttgtttt 119
>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence Length = 217939 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agccaccaagaagctccagg 305 |||||||||||||||||||| Sbjct: 31977 agccaccaagaagctccagg 31958
>gb|AF359578.1| Rana catesbeiana RC-RNase7 precursor, mRNA, complete cds Length = 499 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ttgtcaatgatggtgttacagttg 422 ||||| |||||||||||||||||| Sbjct: 173 ttgtccatgatggtgttacagttg 150
>gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187657 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aggaaaacatggcttcacca 106 |||||||||||||||||||| Sbjct: 148291 aggaaaacatggcttcacca 148310
>gb|AC003060.1| Mus musculus Chromosome 16 BAC Clone 72k21 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 118235 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agccaccaagaagctccagg 305 |||||||||||||||||||| Sbjct: 65791 agccaccaagaagctccagg 65810
>emb|CR385048.3| Wallaby DNA sequence from clone XX-121C8, complete sequence Length = 37081 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 agaagctccaggttggagtc 313 |||||||||||||||||||| Sbjct: 5286 agaagctccaggttggagtc 5305
>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agccaccaagaagctccagg 305 |||||||||||||||||||| Sbjct: 98967 agccaccaagaagctccagg 98986
>gb|AF351209.1|AF351209 Rana catesbeiana RNase A-type ribonuclease rc208 precursor, gene, complete cds Length = 402 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ttgtcaatgatggtgttacagttg 422 ||||| |||||||||||||||||| Sbjct: 140 ttgtccatgatggtgttacagttg 117
>gb|AF351207.1|AF351207 Rana catesbeiana RNase A-type ribonuclease rc203 precursor, gene, complete cds Length = 399 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ttgtcaatgatggtgttacagttg 422 ||||| |||||||||||||||||| Sbjct: 140 ttgtccatgatggtgttacagttg 117
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 gctggcagatcttgttggag 338 |||||||||||||||||||| Sbjct: 6647592 gctggcagatcttgttggag 6647611
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cagacaagaagccattttca 178 |||||||||||||||||||| Sbjct: 9931 cagacaagaagccattttca 9950
>gb|AC016730.9| Homo sapiens BAC clone RP11-375H3 from 2, complete sequence Length = 172243 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aggaaaacatggcttcacca 106 |||||||||||||||||||| Sbjct: 151254 aggaaaacatggcttcacca 151235
>gb|AC084474.1|CBRG01A7 Caenorhabditis briggsae cosmid G01A7, complete sequence Length = 18839 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 aagccattttcattgtcatctatc 190 ||||||||||||||||||| |||| Sbjct: 17673 aagccattttcattgtcatttatc 17696
>gb|AF039104.1|AF039104 Rana catesbeiana ribonuclease precursor (rcr) mRNA, complete cds Length = 883 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ttgtcaatgatggtgttacagttg 422 ||||| |||||||||||||||||| Sbjct: 383 ttgtccatgatggtgttacagttg 360
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 gctggcagatcttgttggag 338 |||||||||||||||||||| Sbjct: 127763 gctggcagatcttgttggag 127782
>dbj|AB048352.1| Paramecium caudatum gene for hsp60, partial cds Length = 542 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 ggaccaaagggaaggaatgttgtt 370 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24
>gb|AY108268.1| Zea mays PCO078526 mRNA sequence Length = 1437 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cccctcacccgcacccgccc 26 |||||||||||||||||||| Sbjct: 402 cccctcacccgcacccgccc 421
>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete sequence Length = 192196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gtgttacagttgcaagagag 430 |||||||||||||||||||| Sbjct: 147349 gtgttacagttgcaagagag 147330
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 ggaccaaagggaaggaatgttgtt 370 ||||||||||||||||| |||||| Sbjct: 532617 ggaccaaagggaaggaacgttgtt 532640
>gb|AC132475.4| Mus musculus BAC clone RP23-114P16 from 3, complete sequence Length = 215899 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 aggatcctgttgaaaatatt 460 |||||||||||||||||||| Sbjct: 55483 aggatcctgttgaaaatatt 55502
>dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-78G22, complete sequence Length = 102488 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ttcattgtcatctatctccc 194 |||||||||||||||||||| Sbjct: 75546 ttcattgtcatctatctccc 75565
>dbj|AB086955.1| Clostridium botulinum genes for GroES homolog, GroEL homolog, complete cds Length = 2634 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 341 acattgggaccaaagggaaggaatgttgtttt 372 ||||| |||||||| ||||| ||||||||||| Sbjct: 753 acattaggaccaaaaggaagaaatgttgtttt 784
>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete sequence Length = 158592 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 caagaagctccaggttggagtcaa 315 ||||||||||||| |||||||||| Sbjct: 112036 caagaagctccagattggagtcaa 112013
>dbj|AB072441.1| Tetrahymena pyriformis hsp60 gene for heat shock 60kD protein, partial cds Length = 516 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 ggaccaaagggaaggaatgttgtt 370 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24
>dbj|AB072440.1| Tetrahymena thermophila hsp60 gene for heat shock 60kD protein, partial cds Length = 516 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 ggaccaaagggaaggaatgttgtt 370 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,960,543 Number of Sequences: 3902068 Number of extensions: 3960543 Number of successful extensions: 70101 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69883 Number of HSP's gapped (non-prelim): 202 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)