ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdg08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY112372.1| Zea mays CL6272_1 mRNA sequence 172 6e-40
2ref|XM_480605.1| Oryza sativa (japonica cultivar-group), mRNA 170 3e-39
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
4dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
5dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
6emb|AJ844002.1| Plantago major mRNA for copper chaperone (cch1 g... 105 1e-19
7gb|AY603358.1| Populus alba x Populus tremula var. glandulosa co... 90 7e-15
8ref|XM_466081.1| Oryza sativa (japonica cultivar-group), mRNA 74 4e-10
9dbj|AK121599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
10gb|AF198626.1|AF198626 Oryza sativa copper chaperone homolog CCH... 74 4e-10
11dbj|AK058520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
12gb|AY253832.1| Lycopersicon esculentum copper chaperone (LeCCH) ... 70 7e-09
13ref|NM_105295.1| Arabidopsis thaliana metal ion binding AT1G6624... 68 3e-08
14gb|AY077678.1| Arabidopsis thaliana At1g66240/T6J19_6 mRNA, comp... 68 3e-08
15gb|AY039898.1| Arabidopsis thaliana At1g66240/T6J19_6 mRNA, comp... 68 3e-08
16emb|BX816283.1|CNS0AD4L Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
18dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
19emb|BX813458.1|CNS0ADQL Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
20gb|BT009582.1| Triticum aestivum clone wre1n.pk0042.e2:fis, full... 56 1e-04
21emb|AJ585386.1| Hordeum vulgare subsp. vulgare mRNA for chopper ... 56 1e-04
22gb|AC066691.3|AC066691 Arabidopsis thaliana chromosome 1 BAC T6J... 52 0.002
23gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, co... 48 0.025
24ref|NM_115482.2| Arabidopsis thaliana CCH AT3G56240 (CCH) mRNA, ... 46 0.10
25gb|AF361860.1| Arabidopsis thaliana AT3g56240/F18O21_200 mRNA, c... 46 0.10
26gb|AY066056.1| Arabidopsis thaliana AT3g56240/F18O21_200 mRNA, c... 46 0.10
27emb|BX823024.1|CNS0A4Y4 Arabidopsis thaliana Full-length cDNA Co... 46 0.10
28gb|AY085657.1| Arabidopsis thaliana clone 16647 mRNA, complete s... 46 0.10
29gb|U88711.1|ATU88711 Arabidopsis thaliana copper homeostasis fac... 46 0.10
30emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in ... 44 0.40
31emb|BX649575.18| Zebrafish DNA sequence from clone CH211-215H12 ... 44 0.40
32emb|CR352237.9| Zebrafish DNA sequence from clone CH211-13I11 in... 44 0.40
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
34dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
35emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chr... 44 0.40
36gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, co... 42 1.6
37ref|XM_764566.1| Giardia lamblia ATCC 50803 hypothetical protein... 42 1.6
38gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Can... 42 1.6
39gb|AC102004.7| Mus musculus chromosome 15, clone RP24-489M6, com... 40 6.2
40ref|NM_175406.1| Mus musculus ATPase, H+ transporting, lysosomal... 40 6.2
41gb|AY517482.1| Mus musculus putative osteoclast-specific vacuola... 40 6.2
42emb|AL773599.11| Mouse DNA sequence from clone RP23-326I8 on chr... 40 6.2
43gb|AC133550.2| Homo sapiens chromosome 16 clone RP11-22P6, compl... 40 6.2
44gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosom... 40 6.2
45gb|AY145896.1| Mus musculus vacuolar proton-translocating ATPase... 40 6.2
46gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, com... 40 6.2
47gb|AC121612.2| Mus musculus BAC clone RP23-337A17 from 6, comple... 40 6.2
48gb|AC112990.7| Mus musculus chromosome 19, clone RP24-317E20, co... 40 6.2
49gb|AY270588.1| Homo sapiens clone SKG03-F03 putative promoter se... 40 6.2
50gb|AC157550.3| Mus musculus chromosome 15, clone RP24-263A11, co... 40 6.2
51dbj|AK137586.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 6.2
52dbj|AK156988.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.2
53dbj|AK170578.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.2
54dbj|AK170405.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.2
55emb|CR406297.1| Gallus gallus finished cDNA, clone ChEST860i24 40 6.2
56gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.2
57gb|AC156632.2| Mus musculus BAC clone RP24-511E24 from chromosom... 40 6.2
58gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, com... 40 6.2
59gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome ... 40 6.2
60gb|AC154405.2| Mus musculus BAC clone RP24-248O10 from chromosom... 40 6.2
61dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
62ref|NM_209039.1| Eremothecium gossypii ACR284Cp (ACR284C), mRNA 40 6.2
63gb|AC100406.7| Mus musculus chromosome 9, clone RP23-134M7, comp... 40 6.2
64dbj|AB088358.1| Mus musculus Atp6Vod2 mRNA for proton-translocat... 40 6.2
65gb|AC145929.4| Gallus gallus BAC clone CH261-31A6 from chromosom... 40 6.2
66emb|AL954824.2| Mouse DNA sequence from clone RP23-326I8 on chro... 40 6.2
67emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chr... 40 6.2 
>gb|AY112372.1| Zea mays CL6272_1 mRNA sequence
          Length = 1354

 Score =  172 bits (87), Expect = 6e-40
 Identities = 174/203 (85%)
 Strand = Plus / Plus

                                                                       
Query: 102 cagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgttaagcgg 161
           ||||||||||  |||| |||||||||||| || ||||| || ||||||||||| ||||||
Sbjct: 162 cagactgttgtgctcaaggttggcatgtcctgtgagggctgtgttggagctgtcaagcgg 221

                                                                       
Query: 162 gttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtc 221
           || || ||||| |||||||| || ||||||| ||| |||||||||| ||| |||||||||
Sbjct: 222 gtcctgggcaagatggaaggcgttgagtcctacgacgtagacatcatggaacagaaggtc 281

                                                                       
Query: 222 actgtgaagggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaag 281
           || |||||||| |||||||| || || || || ||||| |||||||| ||||| ||||||
Sbjct: 282 accgtgaagggcaatgtgacacctgacgccgtcctgcaaactgtttccaagactggcaag 341

                                  
Query: 282 aagacctccttctgggaggctga 304
           ||||| || ||||||||||||||
Sbjct: 342 aagacttcgttctgggaggctga 364
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>ref|XM_480605.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 246

 Score =  170 bits (86), Expect = 3e-39
 Identities = 173/202 (85%)
 Strand = Plus / Plus

                                                                       
Query: 103 agactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgttaagcggg 162
           |||||||||  ||||||||||| ||||| || || || || |||||||||||||||||||
Sbjct: 8   agactgttgtgctcagggttgggatgtcctgtgaaggttgtgttggagctgttaagcggg 67

                                                                       
Query: 163 ttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtca 222
           | || || || ||| |||| || |||||||| || |||||||||||||||||||||||||
Sbjct: 68  tactgggaaagatgcaaggagtggagtcctttgacgtagacatcaaggagcagaaggtca 127

                                                                       
Query: 223 ctgtgaagggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaaga 282
           |||| ||||| ||||| || || ||||| ||||| ||||| ||||| ||||| |||||||
Sbjct: 128 ctgtcaagggaaatgttacaccagatgccgttcttcagaccgtttcaaagacgggcaaga 187

                                 
Query: 283 agacctccttctgggaggctga 304
           ||||||| |||||||| |||||
Sbjct: 188 agacctcgttctgggatgctga 209
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  125 bits (63), Expect = 1e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                           
Query: 186     gagtccttcgatgtagacatcaaggagcagaaggtcactgtgaagggtaatgtgacgccg 245
               |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| || || 
Sbjct: 6154649 gagtcctttgacgtagacatcaaggagcagaaggtcactgtcaagggaaatgttacacca 6154708

                                                                          
Query: 246     gatgctgttctgcagactgtttcgaagacaggcaagaagacctccttctgggaggctga 304
               ||||| ||||| ||||| ||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 6154709 gatgccgttcttcagaccgtttcaaagacgggcaagaagacctcgttctgggatgctga 6154767



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                           
Query: 102     cagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgttaagcgg 161
               ||||||||||  ||||||||||| ||||| || || || || ||||||||||||||||||
Sbjct: 6153673 cagactgttgtgctcagggttgggatgtcctgtgaaggttgtgttggagctgttaagcgg 6153732

                 
Query: 162     gt 163
               ||
Sbjct: 6153733 gt 6153734



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       attcccccctccctctctct 56
                ||||||||||||||||||||
Sbjct: 21129012 attcccccctccctctctct 21129031
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score =  125 bits (63), Expect = 1e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                         
Query: 186   gagtccttcgatgtagacatcaaggagcagaaggtcactgtgaagggtaatgtgacgccg 245
             |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| || || 
Sbjct: 18042 gagtcctttgacgtagacatcaaggagcagaaggtcactgtcaagggaaatgttacacca 18101

                                                                        
Query: 246   gatgctgttctgcagactgtttcgaagacaggcaagaagacctccttctgggaggctga 304
             ||||| ||||| ||||| ||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 18102 gatgccgttcttcagaccgtttcaaagacgggcaagaagacctcgttctgggatgctga 18160



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                         
Query: 102   cagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgttaagcgg 161
             ||||||||||  ||||||||||| ||||| || || || || ||||||||||||||||||
Sbjct: 17066 cagactgttgtgctcagggttgggatgtcctgtgaaggttgtgttggagctgttaagcgg 17125

               
Query: 162   gt 163
             ||
Sbjct: 17126 gt 17127
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0486F07
          Length = 154926

 Score =  125 bits (63), Expect = 1e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                          
Query: 186    gagtccttcgatgtagacatcaaggagcagaaggtcactgtgaagggtaatgtgacgccg 245
              |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| || || 
Sbjct: 110666 gagtcctttgacgtagacatcaaggagcagaaggtcactgtcaagggaaatgttacacca 110725

                                                                         
Query: 246    gatgctgttctgcagactgtttcgaagacaggcaagaagacctccttctgggaggctga 304
              ||||| ||||| ||||| ||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 110726 gatgccgttcttcagaccgtttcaaagacgggcaagaagacctcgttctgggatgctga 110784



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                          
Query: 102    cagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgttaagcgg 161
              ||||||||||  ||||||||||| ||||| || || || || ||||||||||||||||||
Sbjct: 109690 cagactgttgtgctcagggttgggatgtcctgtgaaggttgtgttggagctgttaagcgg 109749

                
Query: 162    gt 163
              ||
Sbjct: 109750 gt 109751
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>emb|AJ844002.1| Plantago major mRNA for copper chaperone (cch1 gene)
          Length = 703

 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           ||||||||||||||||| |||| |||||||||||| ||| | || || ||||||||||||
Sbjct: 139 atgtctcagactgttgagctcaaggttggcatgtcgtgccaaggctgtgttggagctgtt 198

                                        
Query: 156 aagcgggttcttggcaaaatggaaggtgt 184
           |||||||| ||||| ||||||||||||||
Sbjct: 199 aagcgggtccttggaaaaatggaaggtgt 227



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 255 ctgcagactgtttcgaagacaggcaagaa 283
           |||||||||||||| ||||| ||||||||
Sbjct: 298 ctgcagactgtttcaaagactggcaagaa 326
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>gb|AY603358.1| Populus alba x Populus tremula var. glandulosa copper chaperone
           (CCH) mRNA, complete cds
          Length = 540

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 168/209 (80%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           ||||||||||||||||  |||| |||||| |||||||| || || || ||||| ||||| 
Sbjct: 56  atgtctcagactgttgtcctcaaggttggtatgtcatgtgaaggctgtgttggggctgtg 115

                                                                       
Query: 156 aagcgggttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcag 215
           ||  ||||| | ||||||||||||||||| || || |  ||  | ||  | |||||||| 
Sbjct: 116 aaaagggttttgggcaaaatggaaggtgtggaatcatatgacattgatttgaaggagcaa 175

                                                                       
Query: 216 aaggtcactgtgaagggtaatgtgacgccggatgctgttctgcagactgtttcgaagaca 275
           || ||||| ||||| || ||||||  ||| ||||||||||| ||||| || || ||||| 
Sbjct: 176 aaagtcacagtgaaaggaaatgtgcagccagatgctgttcttcagaccgtctccaagacc 235

                                        
Query: 276 ggcaagaagacctccttctgggaggctga 304
           || ||||||||| |||||||||| |||||
Sbjct: 236 gggaagaagaccgccttctgggaagctga 264
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>ref|XM_466081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 764

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 109/133 (81%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtgaag 230
           ||||||||||| || ||| |||| ||  |||||||  || |||||||||| || ||||||
Sbjct: 231 aaaatggaaggcgtggagacctttgacatagacatggagcagcagaaggtgacggtgaag 290

                                                                       
Query: 231 ggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaagaagacctcc 290
           || ||||| | ||| || |  ||| | ||||| || || |||||||| ||||||||||||
Sbjct: 291 ggcaatgtcaagccagaagacgttttccagacggtctcaaagacagggaagaagacctcc 350

                        
Query: 291 ttctgggaggctg 303
           |||||||||||||
Sbjct: 351 ttctgggaggctg 363
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>dbj|AK121599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039M13, full
           insert sequence
          Length = 764

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 109/133 (81%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtgaag 230
           ||||||||||| || ||| |||| ||  |||||||  || |||||||||| || ||||||
Sbjct: 231 aaaatggaaggcgtggagacctttgacatagacatggagcagcagaaggtgacggtgaag 290

                                                                       
Query: 231 ggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaagaagacctcc 290
           || ||||| | ||| || |  ||| | ||||| || || |||||||| ||||||||||||
Sbjct: 291 ggcaatgtcaagccagaagacgttttccagacggtctcaaagacagggaagaagacctcc 350

                        
Query: 291 ttctgggaggctg 303
           |||||||||||||
Sbjct: 351 ttctgggaggctg 363
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>gb|AF198626.1|AF198626 Oryza sativa copper chaperone homolog CCH mRNA, complete cds
          Length = 676

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 109/133 (81%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtgaag 230
           ||||||||||| || ||| |||| ||  |||||||  || |||||||||| || ||||||
Sbjct: 139 aaaatggaaggcgtggagacctttgacatagacatggagcagcagaaggtgacggtgaag 198

                                                                       
Query: 231 ggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaagaagacctcc 290
           || ||||| | ||| || |  ||| | ||||| || || |||||||| ||||||||||||
Sbjct: 199 ggcaatgtcaagccagaagacgttttccagacggtctcaaagacagggaagaagacctcc 258

                        
Query: 291 ttctgggaggctg 303
           |||||||||||||
Sbjct: 259 ttctgggaggctg 271
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>dbj|AK058520.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H06, full
           insert sequence
          Length = 1157

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 109/133 (81%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtgaag 230
           ||||||||||| || ||| |||| ||  |||||||  || |||||||||| || ||||||
Sbjct: 620 aaaatggaaggcgtggagacctttgacatagacatggagcagcagaaggtgacggtgaag 679

                                                                       
Query: 231 ggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaagaagacctcc 290
           || ||||| | ||| || |  ||| | ||||| || || |||||||| ||||||||||||
Sbjct: 680 ggcaatgtcaagccagaagacgttttccagacggtctcaaagacagggaagaagacctcc 739

                        
Query: 291 ttctgggaggctg 303
           |||||||||||||
Sbjct: 740 ttctgggaggctg 752
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>gb|AY253832.1| Lycopersicon esculentum copper chaperone (LeCCH) mRNA, complete cds
          Length = 391

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 116/143 (81%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           |||||||||||||| |  |||| |||||||||||||||||| || || ||||| ||||| 
Sbjct: 3   atgtctcagactgtcgttctcaaggttggcatgtcatgcgaaggctgtgttggtgctgtg 62

                                                                       
Query: 156 aagcgggttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcag 215
           ||  ||||| | || |||||||||||||| ||  | |||||  | ||  | |||||||| 
Sbjct: 63  aaaagggttttggggaaaatggaaggtgtagaaactttcgacattgatctgaaggagcaa 122

                                  
Query: 216 aaggtcactgtgaagggtaatgt 238
           ||||| ||||||||||| |||||
Sbjct: 123 aaggtgactgtgaagggcaatgt 145
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>ref|NM_105295.1| Arabidopsis thaliana metal ion binding AT1G66240 mRNA, complete cds
          Length = 494

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           ||||||||||| ||||  ||||| || | |||| |||| |||||||| ||||||||||| 
Sbjct: 96  atgtctcagaccgttgttctcagagtggccatgacatgtgagggatgtgttggagctgtg 155

                                                                       
Query: 156 aagcgggttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcag 215
           ||  | |||||||| ||||||||||| || ||||| || || || || || |||||||||
Sbjct: 156 aaaagagttcttgggaaaatggaaggcgtggagtcatttgacgttgatataaaggagcag 215

             
Query: 216 aa 217
           ||
Sbjct: 216 aa 217
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>gb|AY077678.1| Arabidopsis thaliana At1g66240/T6J19_6 mRNA, complete cds
          Length = 321

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           ||||||||||| ||||  ||||| || | |||| |||| |||||||| ||||||||||| 
Sbjct: 91  atgtctcagaccgttgttctcagagtggccatgacatgtgagggatgtgttggagctgtg 150

                                                                       
Query: 156 aagcgggttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcag 215
           ||  | |||||||| ||||||||||| || ||||| || || || || || |||||||||
Sbjct: 151 aaaagagttcttgggaaaatggaaggcgtggagtcatttgacgttgatataaaggagcag 210

             
Query: 216 aa 217
           ||
Sbjct: 211 aa 212
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>gb|AY039898.1| Arabidopsis thaliana At1g66240/T6J19_6 mRNA, complete cds
          Length = 495

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           ||||||||||| ||||  ||||| || | |||| |||| |||||||| ||||||||||| 
Sbjct: 96  atgtctcagaccgttgttctcagagtggccatgacatgtgagggatgtgttggagctgtg 155

                                                                       
Query: 156 aagcgggttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcag 215
           ||  | |||||||| ||||||||||| || ||||| || || || || || |||||||||
Sbjct: 156 aaaagagttcttgggaaaatggaaggcgtggagtcatttgacgttgatataaaggagcag 215

             
Query: 216 aa 217
           ||
Sbjct: 216 aa 217
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>emb|BX816283.1|CNS0AD4L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH39ZE01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 461

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 96  atgtctcagactgttgaactcagggttggcatgtcatgcgagggatgcgttggagctgtt 155
           ||||||||||| ||||  ||||| || | |||| |||| |||||||| ||||||||||| 
Sbjct: 59  atgtctcagaccgttgttctcagagtggccatgacatgtgagggatgtgttggagctgtg 118

                                                                       
Query: 156 aagcgggttcttggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcag 215
           ||  | |||||||| ||||||||||| || ||||| || || || || || |||||||||
Sbjct: 119 aaaagagttcttgggaaaatggaaggcgtggagtcatttgacgttgatataaaggagcag 178

             
Query: 216 aa 217
           ||
Sbjct: 179 aa 180
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                            
Query: 211      agcagaaggtcactgtgaagggtaatgtgacgccggatgctgttctgcagactgtttcga 270
                |||||||||| || |||||||| ||||| | ||| || |  ||| | ||||| || || |
Sbjct: 19492124 agcagaaggtgacggtgaagggcaatgtcaagccagaagacgttttccagacggtctcaa 19492065

                                                 
Query: 271      agacaggcaagaagacctccttctgggaggctg 303
                ||||||| |||||||||||||||||||||||||
Sbjct: 19492064 agacagggaagaagacctccttctgggaggctg 19492032
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>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0476H10
          Length = 151703

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                          
Query: 211    agcagaaggtcactgtgaagggtaatgtgacgccggatgctgttctgcagactgtttcga 270
              |||||||||| || |||||||| ||||| | ||| || |  ||| | ||||| || || |
Sbjct: 109651 agcagaaggtgacggtgaagggcaatgtcaagccagaagacgttttccagacggtctcaa 109592

                                               
Query: 271    agacaggcaagaagacctccttctgggaggctg 303
              ||||||| |||||||||||||||||||||||||
Sbjct: 109591 agacagggaagaagacctccttctgggaggctg 109559
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>emb|BX813458.1|CNS0ADQL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB18ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 396

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 125 catgtcatgcgagggatgcgttggagctgttaagcgggttcttggcaaaatggaaggtgt 184
           |||| |||| |||||||| ||||||||||| ||  | |||||||| ||||||||||| ||
Sbjct: 23  catgacatgtgagggatgtgttggagctgtgaaaagagttcttgggaaaatggaaggcgt 82

                                            
Query: 185 cgagtccttcgatgtagacatcaaggagcagaa 217
            ||||| || || || || || |||||||||||
Sbjct: 83  ggagtcatttgacgttgatataaaggagcagaa 115
to top
>gb|BT009582.1| Triticum aestivum clone wre1n.pk0042.e2:fis, full insert mRNA
           sequence
          Length = 601

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                       
Query: 170 caaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtgaa 229
           |||||||||||| ||||||  ||||||  | |||||  || |||||||||| || |||||
Sbjct: 158 caaaatggaaggcgtcgagagcttcgacatcgacatggagcagcagaaggtgaccgtgaa 217

                                                                       
Query: 230 gggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaagaagacctc 289
           ||| || || | ||| || | |||| | ||||| || || ||||| || ||||||||| |
Sbjct: 218 gggcaacgtcaagccagaagatgttttccagacggtctccaagaccgggaagaagaccgc 277

                       
Query: 290 cttctgggaggc 301
           ||||||||||||
Sbjct: 278 cttctgggaggc 289
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>emb|AJ585386.1| Hordeum vulgare subsp. vulgare mRNA for chopper chaperone (cch
           gene)
          Length = 467

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                       
Query: 170 caaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtgaa 229
           |||||||||||| ||||||  ||||||  | |||||  || |||||||||| || |||||
Sbjct: 126 caaaatggaaggcgtcgagagcttcgacatcgacatggagcagcagaaggtgaccgtgaa 185

                                                                       
Query: 230 gggtaatgtgacgccggatgctgttctgcagactgtttcgaagacaggcaagaagacctc 289
           ||| || || | |||||| |  ||| | ||||| || || ||||| || ||||||||| |
Sbjct: 186 gggcaacgtcaagccggaagacgttttccagacggtctccaagacggggaagaagaccgc 245

                       
Query: 290 cttctgggaggc 301
           ||||||||||||
Sbjct: 246 cttctgggaggc 257
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>gb|AC066691.3|AC066691 Arabidopsis thaliana chromosome 1 BAC T6J19 genomic sequence, complete
             sequence
          Length = 43666

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 125   catgtcatgcgagggatgcgttggagctgttaagcgggttcttggcaaaatggaaggt 182
             |||| |||| |||||||| ||||||||||| ||  | |||||||| ||||||||||||
Sbjct: 27146 catgacatgtgagggatgtgttggagctgtgaaaagagttcttgggaaaatggaaggt 27089
to top
>gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, complete sequence
          Length = 178616

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 35    ccattcccccctccctctctctgc 58
             ||||||||||||||||||||||||
Sbjct: 90134 ccattcccccctccctctctctgc 90157
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>ref|NM_115482.2| Arabidopsis thaliana CCH AT3G56240 (CCH) mRNA, complete cds
          Length = 658

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 168 ggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtg 227
           |||||||||||||| || ||||| || ||  | || ||||||||||| ||||| || |||
Sbjct: 162 ggcaaaatggaaggggttgagtcatttgacattgatatcaaggagcaaaaggtgacagtg 221

                      
Query: 228 aagggtaatgt 238
           || ||||||||
Sbjct: 222 aaaggtaatgt 232
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>gb|AF361860.1| Arabidopsis thaliana AT3g56240/F18O21_200 mRNA, complete cds
          Length = 628

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 168 ggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtg 227
           |||||||||||||| || ||||| || ||  | || ||||||||||| ||||| || |||
Sbjct: 158 ggcaaaatggaaggggttgagtcatttgacattgatatcaaggagcaaaaggtgacagtg 217

                      
Query: 228 aagggtaatgt 238
           || ||||||||
Sbjct: 218 aaaggtaatgt 228
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>gb|AY066056.1| Arabidopsis thaliana AT3g56240/F18O21_200 mRNA, complete cds
          Length = 366

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 168 ggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtg 227
           |||||||||||||| || ||||| || ||  | || ||||||||||| ||||| || |||
Sbjct: 73  ggcaaaatggaaggggttgagtcatttgacattgatatcaaggagcaaaaggtgacagtg 132

                      
Query: 228 aagggtaatgt 238
           || ||||||||
Sbjct: 133 aaaggtaatgt 143
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>emb|BX823024.1|CNS0A4Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB81ZE03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 602

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 168 ggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtg 227
           |||||||||||||| || ||||| || ||  | || ||||||||||| ||||| || |||
Sbjct: 140 ggcaaaatggaaggggttgagtcatttgacattgatatcaaggagcaaaaggtgacagtg 199

                      
Query: 228 aagggtaatgt 238
           || ||||||||
Sbjct: 200 aaaggtaatgt 210
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>gb|AY085657.1| Arabidopsis thaliana clone 16647 mRNA, complete sequence
          Length = 631

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 168 ggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtg 227
           |||||||||||||| || ||||| || ||  | || ||||||||||| ||||| || |||
Sbjct: 163 ggcaaaatggaaggggttgagtcatttgacattgatatcaaggagcaaaaggtgacagtg 222

                      
Query: 228 aagggtaatgt 238
           || ||||||||
Sbjct: 223 aaaggtaatgt 233
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>gb|U88711.1|ATU88711 Arabidopsis thaliana copper homeostasis factor (CCH) mRNA, complete
           cds
          Length = 585

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 168 ggcaaaatggaaggtgtcgagtccttcgatgtagacatcaaggagcagaaggtcactgtg 227
           |||||||||||||| || ||||| || ||  | || ||||||||||| ||||| || |||
Sbjct: 106 ggcaaaatggaaggggttgagtcatttgacattgatatcaaggagcaaaaggtgacagtg 165

                      
Query: 228 aagggtaatgt 238
           || ||||||||
Sbjct: 166 aaaggtaatgt 176
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>emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in linkage group 11,
             complete sequence
          Length = 158543

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 348   aatatgtaaactgtgaagtttattgt 373
             |||||||||| |||||||||||||||
Sbjct: 16644 aatatgtaaattgtgaagtttattgt 16619
to top
>emb|BX649575.18| Zebrafish DNA sequence from clone CH211-215H12 in linkage group 8,
            complete sequence
          Length = 171493

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 35   ccattcccccctccctctctct 56
            ||||||||||||||||||||||
Sbjct: 9593 ccattcccccctccctctctct 9572
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>emb|CR352237.9| Zebrafish DNA sequence from clone CH211-13I11 in linkage group 11,
              complete sequence
          Length = 193648

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 348    aatatgtaaactgtgaagtttattgt 373
              |||||||||| |||||||||||||||
Sbjct: 132874 aatatgtaaattgtgaagtttattgt 132849
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 34     tccattcccccctccctctctc 55
              ||||||||||||||||||||||
Sbjct: 373854 tccattcccccctccctctctc 373833
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    tccattcccccctccctctctc 55
             ||||||||||||||||||||||
Sbjct: 83807 tccattcccccctccctctctc 83786
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>emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chromosome 2, complete
              sequence
          Length = 212364

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 35     ccattcccccctccctctctct 56
              ||||||||||||||||||||||
Sbjct: 109296 ccattcccccctccctctctct 109275
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>gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, complete sequence
          Length = 184600

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     ccctccctctctctgcgccct 63
              |||||||||||||||||||||
Sbjct: 123291 ccctccctctctctgcgccct 123311
to top
>ref|XM_764566.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_93_39365_43285)
            partial mRNA
          Length = 3921

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 198  gtagacatcaaggagcagaaggtca 222
            |||||||||||||||| ||||||||
Sbjct: 1827 gtagacatcaaggagcggaaggtca 1803
to top
>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186968

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 292   tctgggaggctgaaccctcag 312
             |||||||||||||||||||||
Sbjct: 84810 tctgggaggctgaaccctcag 84790
to top
>gb|AC102004.7| Mus musculus chromosome 15, clone RP24-489M6, complete sequence
          Length = 164810

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   atgtaaactgtgaagtttat 370
             ||||||||||||||||||||
Sbjct: 37814 atgtaaactgtgaagtttat 37833
to top
>ref|NM_175406.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D2
            (Atp6v0d2), mRNA
          Length = 2523

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2487 aagtttattgtagcaatggc 2468
to top
>gb|AY517482.1| Mus musculus putative osteoclast-specific vacuolar ATP synthase mRNA,
            complete cds
          Length = 2506

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2476 aagtttattgtagcaatggc 2457
to top
>emb|AL773599.11| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete
             sequence
          Length = 46151

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   aagtttattgtagcaatggc 382
             ||||||||||||||||||||
Sbjct: 12410 aagtttattgtagcaatggc 12429
to top
>gb|AC133550.2| Homo sapiens chromosome 16 clone RP11-22P6, complete sequence
          Length = 58207

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   tctgggaggctgaaccctca 311
             ||||||||||||||||||||
Sbjct: 11096 tctgggaggctgaaccctca 11077
to top
>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete sequence
          Length = 218688

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     tccattcccccctccctctctctg 57
              ||||||||||||||||| ||||||
Sbjct: 212161 tccattcccccctccctgtctctg 212184
to top
>gb|AY145896.1| Mus musculus vacuolar proton-translocating ATPase d subunit d2
            isoform mRNA, complete cds
          Length = 2523

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2487 aagtttattgtagcaatggc 2468
to top
>gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, complete sequence
          Length = 163424

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tctgggaggctgaaccctca 311
            ||||||||||||||||||||
Sbjct: 9308 tctgggaggctgaaccctca 9327
to top
>gb|AC121612.2| Mus musculus BAC clone RP23-337A17 from 6, complete sequence
          Length = 209548

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    cattcccccctccctctctc 55
             ||||||||||||||||||||
Sbjct: 38361 cattcccccctccctctctc 38380
to top
>gb|AC112990.7| Mus musculus chromosome 19, clone RP24-317E20, complete sequence
          Length = 183322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    tccattcccccctccctctctctg 57
             ||||||||||||||||| ||||||
Sbjct: 85767 tccattcccccctccctgtctctg 85790
to top
>gb|AY270588.1| Homo sapiens clone SKG03-F03 putative promoter sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 tctgggaggctgaaccctca 311
           ||||||||||||||||||||
Sbjct: 360 tctgggaggctgaaccctca 379
to top
>gb|AC157550.3| Mus musculus chromosome 15, clone RP24-263A11, complete sequence
          Length = 198532

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    atgtaaactgtgaagtttat 370
              ||||||||||||||||||||
Sbjct: 189871 atgtaaactgtgaagtttat 189890
to top
>dbj|AK137586.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830148K22 product:ATPase, H+
            transporting, V0 subunit D, isoform 2, full insert
            sequence
          Length = 2486

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2471 aagtttattgtagcaatggc 2452
to top
>dbj|AK156988.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830111N13 product:hypothetical protein,
           full insert sequence
          Length = 1759

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 atgtaaactgtgaagtttat 370
           ||||||||||||||||||||
Sbjct: 96  atgtaaactgtgaagtttat 115
to top
>dbj|AK170578.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630109C16
            product:ATPase, H+ transporting, V0 subunit D, isoform 2,
            full insert sequence
          Length = 2447

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2432 aagtttattgtagcaatggc 2413
to top
>dbj|AK170405.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630102K05
            product:ATPase, H+ transporting, V0 subunit D, isoform 2,
            full insert sequence
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2461 aagtttattgtagcaatggc 2442
to top
>emb|CR406297.1| Gallus gallus finished cDNA, clone ChEST860i24
          Length = 1380

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 31  gtttccattcccccctccctctct 54
           |||| |||||||||||||||||||
Sbjct: 119 gtttgcattcccccctccctctct 96
to top
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     ttcccccctccctctctctg 57
              ||||||||||||||||||||
Sbjct: 871446 ttcccccctccctctctctg 871465
to top
>gb|AC156632.2| Mus musculus BAC clone RP24-511E24 from chromosome 12, complete
             sequence
          Length = 173515

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   taaactgtgaagtttattgt 373
             ||||||||||||||||||||
Sbjct: 13901 taaactgtgaagtttattgt 13920
to top
>gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, complete sequence
          Length = 224150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  tctgggaggctgaaccctca 311
            ||||||||||||||||||||
Sbjct: 4588 tctgggaggctgaaccctca 4569
to top
>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence
          Length = 209970

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     tttccattcccccctccctctctc 55
              |||||||||| |||||||||||||
Sbjct: 122255 tttccattcctccctccctctctc 122232
to top
>gb|AC154405.2| Mus musculus BAC clone RP24-248O10 from chromosome 12, complete
             sequence
          Length = 158411

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   taaactgtgaagtttattgt 373
             ||||||||||||||||||||
Sbjct: 83523 taaactgtgaagtttattgt 83504
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     attcccccctccctctctct 56
              ||||||||||||||||||||
Sbjct: 100222 attcccccctccctctctct 100241
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>ref|NM_209039.1| Eremothecium gossypii ACR284Cp (ACR284C), mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   ttcccccctccctctctctg 57
            ||||||||||||||||||||
Sbjct: 1148 ttcccccctccctctctctg 1129
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>gb|AC100406.7| Mus musculus chromosome 9, clone RP23-134M7, complete sequence
          Length = 183837

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    tccattcccccctccctctctctg 57
             ||||||||||||||||||| ||||
Sbjct: 66053 tccattcccccctccctctgtctg 66076
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>dbj|AB088358.1| Mus musculus Atp6Vod2 mRNA for proton-translocating ATPase d subunit
            isoform d2, complete cds
          Length = 2482

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  aagtttattgtagcaatggc 382
            ||||||||||||||||||||
Sbjct: 2447 aagtttattgtagcaatggc 2428
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>gb|AC145929.4| Gallus gallus BAC clone CH261-31A6 from chromosome unknown, complete
              sequence
          Length = 172539

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     gtttccattcccccctccctctct 54
              |||| |||||||||||||||||||
Sbjct: 157479 gtttgcattcccccctccctctct 157502
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>emb|AL954824.2| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete
             sequence
          Length = 46151

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   aagtttattgtagcaatggc 382
             ||||||||||||||||||||
Sbjct: 33742 aagtttattgtagcaatggc 33723
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>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete
             sequence
          Length = 187006

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcccccctccctctctctgc 58
             ||||||||||||||||||||
Sbjct: 31368 tcccccctccctctctctgc 31349



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcccccctccctctctctgc 58
             ||||||||||||||||||||
Sbjct: 31343 tcccccctccctctctctgc 31324



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcccccctccctctctctgc 58
             ||||||||||||||||||||
Sbjct: 31318 tcccccctccctctctctgc 31299


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,330,263
Number of Sequences: 3902068
Number of extensions: 4330263
Number of successful extensions: 92856
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92554
Number of HSP's gapped (non-prelim): 298
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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