Clone Name | basdg07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 Score = 694 bits (350), Expect = 0.0 Identities = 355/357 (99%) Strand = Plus / Plus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 21 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcctt 80 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatga 140 Query: 121 tgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacga 180 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141 tgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatacga 200 Query: 181 ggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 ggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcc 260 Query: 241 tattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 tattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagt 320 Query: 301 tgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 tgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 377
>ref|XM_483666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1158 Score = 426 bits (215), Expect = e-116 Identities = 316/350 (90%) Strand = Plus / Plus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 116 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 175 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127 |||||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 176 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 235 Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187 || ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 236 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 295 Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247 ||||| || |||||||||||||| |||| |||||||||||||| || |||||||||||| Sbjct: 296 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaa 355 Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307 || ||| || ||||| |||||||| |||||| |||||||||| ||||| ||||||||| Sbjct: 356 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 415 Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 ||||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 416 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 465
>ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B11.9 mRNA Length = 1229 Score = 426 bits (215), Expect = e-116 Identities = 316/350 (90%) Strand = Plus / Plus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 127 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 186 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127 |||||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 187 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 246 Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187 || ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 247 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 306 Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247 ||||| || |||||||||||||| |||| |||||||||||||| || |||||||||||| Sbjct: 307 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaa 366 Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307 || ||| || ||||| |||||||| |||||| |||||||||| ||||| ||||||||| Sbjct: 367 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 426 Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 ||||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 427 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 476
>dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B09, full insert sequence Length = 1158 Score = 418 bits (211), Expect = e-114 Identities = 315/350 (90%) Strand = Plus / Plus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 116 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 175 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 176 ctcatcttctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 235 Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187 || ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 236 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 295 Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247 ||||| || |||||||||||||| |||| |||||||||||||| || |||||||||||| Sbjct: 296 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaa 355 Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307 || ||| || ||||| |||||||| |||||| |||||||||| ||||| ||||||||| Sbjct: 356 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 415 Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 ||||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 416 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 465
>dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074O14, full insert sequence Length = 1229 Score = 418 bits (211), Expect = e-114 Identities = 315/350 (90%) Strand = Plus / Plus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 127 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 186 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127 |||||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 187 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 246 Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187 || ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 247 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 306 Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247 ||||| || |||||||||||||| |||| |||||||||||||| || ||||| |||||| Sbjct: 307 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcccattaaa 366 Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307 || ||| || ||||| |||||||| |||||| |||||||||| ||||| ||||||||| Sbjct: 367 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 426 Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 ||||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 427 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 476
>gb|BT016732.1| Zea mays clone Contig565 mRNA sequence Length = 1248 Score = 377 bits (190), Expect = e-101 Identities = 315/357 (88%) Strand = Plus / Plus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 ||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 139 ggcggctcccatggtcgacgccgaatacctgcgccaggtcgacagggcgcgccgccacct 198 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatga 120 ||| ||||||||| || ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 199 ccgcgccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatggcatga 258 Query: 121 tgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacga 180 |||||| || ||||| |||| |||| |||||||||||||||||| || |||||||| || Sbjct: 259 tgctggaacttatgacctgaagacaaaaactggtggtgcaaatggttcgattagatatga 318 Query: 181 ggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcc 240 ||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 319 agaagagtacactcatggttcaaatgctggtttaaagattgctatcgatctccttgagcc 378 Query: 241 tattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagt 300 ||| ||||| ||| |||||||||| |||||||||||||| |||||||||| ||||| || Sbjct: 379 tatcaaagcaaagaatccaaagataacatatgcagacctgtatcagcttgctggagtggt 438 Query: 301 tgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 |||||| ||||| || ||||| ||||| ||||| || || ||||| ||||||||||| Sbjct: 439 tgcagtcgaagtgactggggggccaactgttgaatttattcctggcagacgtgattc 495
>gb|AY109419.1| Zea mays CL26634_1 mRNA sequence Length = 1373 Score = 256 bits (129), Expect = 4e-65 Identities = 249/293 (84%) Strand = Plus / Minus Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgct 124 ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1206 gccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatggcatgatgct 1147 Query: 125 ggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaa 184 || || ||||| |||| || |||||||||||||||| || |||||||| || ||| Sbjct: 1146 ggaacttatgacctgaagacnnnnnctggtggtgcaaatggttcgattagatatgaagaa 1087 Query: 185 gagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctatt 244 |||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1086 gagtacactcatggttcaaatgctggtttaaagattgctatcgatctccttgagcctatc 1027 Query: 245 aaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgca 304 ||||| ||| |||||||||| |||||||||||||| |||||||||| ||||| |||||| Sbjct: 1026 aaagcaaagaatccaaagataacatatgcagacctgtatcagcttgctggagtggttgca 967 Query: 305 gttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357 || ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 966 gtcgaagtgactnnnnnnccaactgttgaatttattcctggcagacgtgattc 914 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgaca 44 ||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 1270 ggcggctcccatggtcgacgccgaatacctgcgccaggtcgaca 1227
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 3e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||| Sbjct: 20903598 ggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgacct 20903539 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111 ||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20903538 ccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 20903488 Score = 131 bits (66), Expect = 2e-27 Identities = 110/125 (88%) Strand = Plus / Minus Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171 |||||||||||||||||| ||||||| || |||| |||| | ||||||||||| ||||| Sbjct: 20901812 atggcatgatgctggcacatatgatgcaaaaacaaaaactaggggtgcaaatggttcaat 20901753 Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231 ||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct: 20901752 taggcatgaggaagagtacactcatggttcaaatgctggactaaaaattgccattgatct 20901693 Query: 232 ccttg 236 ||||| Sbjct: 20901692 ccttg 20901688 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttga 333 ||||||||| ||||| |||||||||||||| || || |||||||||||||| Sbjct: 20900418 tcagcttgctggagtggttgcagttgaagttactggaggtccaaccgttga 20900368
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 157 bits (79), Expect = 3e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||| Sbjct: 95824 ggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgacct 95765 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111 ||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95764 ccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 95714 Score = 131 bits (66), Expect = 2e-27 Identities = 110/125 (88%) Strand = Plus / Minus Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171 |||||||||||||||||| ||||||| || |||| |||| | ||||||||||| ||||| Sbjct: 94038 atggcatgatgctggcacatatgatgcaaaaacaaaaactaggggtgcaaatggttcaat 93979 Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231 ||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct: 93978 taggcatgaggaagagtacactcatggttcaaatgctggactaaaaattgccattgatct 93919 Query: 232 ccttg 236 ||||| Sbjct: 93918 ccttg 93914 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttga 333 ||||||||| ||||| |||||||||||||| || || |||||||||||||| Sbjct: 92644 tcagcttgctggagtggttgcagttgaagttactggaggtccaaccgttga 92594
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 153 bits (77), Expect = 5e-34 Identities = 109/120 (90%) Strand = Plus / Minus Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171 ||||||||| || ||||| ||||| |||||||||| |||||||||||||||||| ||||| Sbjct: 55926 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 55867 Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231 ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| Sbjct: 55866 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 55807 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| || || ||| Sbjct: 56985 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccaacttcgcgcc 56926 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111 |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 56925 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 56882 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 284 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 343 |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 55136 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 55077 Query: 344 ggaagacgtg 353 |||||||||| Sbjct: 55076 ggaagacgtg 55067
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 153 bits (77), Expect = 5e-34 Identities = 109/120 (90%) Strand = Plus / Minus Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171 ||||||||| || ||||| ||||| |||||||||| |||||||||||||||||| ||||| Sbjct: 27550886 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 27550827 Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231 ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| Sbjct: 27550826 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 27550767 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 27551945 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 27551886 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111 |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 27551885 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 27551842 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 284 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 343 |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 27550096 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 27550037 Query: 344 ggaagacgtg 353 |||||||||| Sbjct: 27550036 ggaagacgtg 27550027
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 153 bits (77), Expect = 5e-34 Identities = 109/120 (90%) Strand = Plus / Minus Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171 ||||||||| || ||||| ||||| |||||||||| |||||||||||||||||| ||||| Sbjct: 33176 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 33117 Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231 ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| Sbjct: 33116 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 33057 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67 ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 34235 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 34176 Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111 |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 34175 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 34132 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 284 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 343 |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 32386 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 32327 Query: 344 ggaagacgtg 353 |||||||||| Sbjct: 32326 ggaagacgtg 32317
>gb|AF159254.1|AF159254 Zantedeschia aethiopica ascorbate peroxidase (cmApx) mRNA, complete cds Length = 1167 Score = 133 bits (67), Expect = 4e-28 Identities = 222/274 (81%) Strand = Plus / Plus Query: 36 aggtcgacagggcgcgccgcgccctccgtgccctcatcgcctccaagggatgcgccccca 95 ||||||||| ||||||| | | |||||| |||||||||||| |||| ||||| ||| Sbjct: 89 aggtcgacaaggcgcgcagggacctccgcgccctcatcgccagcaagaactgcgctcccg 148 Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacacaagaactggtg 155 ||||||||||||| |||||||||||||||||||| ||||||||||| |||| || |||| Sbjct: 149 tcatgctccgcctagcatggcatgatgctggcacttatgatgtgaaaacaaagacaggtg 208 Query: 156 gtgcaaatggntcaattagatacgaggaagagtacacccatggttcaaatgctggcttaa 215 || ||||||| ||||| ||| | ||||||||| ||| ||||| |||||||||| |||| Sbjct: 209 gtccaaatggttcaatcagaaatgaggaagagcacaaacatggcgcaaatgctgggttaa 268 Query: 216 aaattgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcag 275 | || || || ||||| ||| | | || || || ||||||| ||| |||||||| | Sbjct: 269 agatagccatagatctttgtgaaacggtgaaggcaaaacatccaaggataacatatgctg 328 Query: 276 accttcatcagcttgccggagtagttgcagttga 309 ||||| | |||||||| ||||| || |||||||| Sbjct: 329 acctttaccagcttgctggagttgtcgcagttga 362
>ref|XM_474945.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 91.7 bits (46), Expect = 1e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 218 attgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagac 277 |||||||||||||| || || || || ||| ||||||||| |||||||| ||||| ||| Sbjct: 223 attgctattgatctgctagaaccgatgaaacagaagcatcccaagattacctatgctgac 282 Query: 278 cttcatcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327 || |||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 283 ctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 332 Score = 81.8 bits (41), Expect = 1e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 6 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 65 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 || |||||||||||| |||| | ||||| ||||||||||||||||| || ||||| Sbjct: 66 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggca 122
>gb|AY382617.1| Oryza sativa (indica cultivar-group) putative peroxisome-bound ascorbate peroxidase (APx3) mRNA, complete cds Length = 1060 Score = 89.7 bits (45), Expect = 6e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 |||||| |||||||||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 45 ggcggcgccggtggtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 104 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 || |||||||||||| |||| | ||||| ||||||||||||||||| || ||||| Sbjct: 105 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggca 161 Score = 83.8 bits (42), Expect = 4e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 218 attgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagac 277 |||||||||||||| || || || || ||| || |||||| |||||||| ||||| ||| Sbjct: 262 attgctattgatctgctagaaccgatgaaacagaggcatcccaagattacctatgctgac 321 Query: 278 cttcatcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327 || |||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 322 ctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 371
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 79.8 bits (40), Expect = 6e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 11191 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 11132 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcct 108 || |||||||||||| |||| | ||||| ||||||||||||||||| Sbjct: 11131 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcct 11084 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327 ||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 10318 tcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 10274
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 6e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60 |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 8200678 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 8200619 Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcct 108 || |||||||||||| |||| | ||||| ||||||||||||||||| Sbjct: 8200618 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcct 8200571 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327 ||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 8199805 tcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 8199761
>dbj|AK108458.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D05, full insert sequence Length = 755 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 251 aagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaa 310 ||||||||||| || || ||||| || ||| |||||||||| ||||| |||||||||||| Sbjct: 79 aagcatccaaatatcacttatgctgatctttatcagcttgctggagtggttgcagttgaa 138 Query: 311 gtcaccgggggtccaaccgttga 333 || || || |||||||||||||| Sbjct: 139 gttactggaggtccaaccgttga 161
>gb|DQ078123.1| Rheum australe ascorbate peroxidase mRNA, complete cds Length = 1192 Score = 71.9 bits (36), Expect = 1e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 145 |||||||||||||||||||||||||| ||||| ||||| || || ||||||| ||| || Sbjct: 91 tgcgcccccatcatgctccgcctcgcgtggcacgatgccgggacatatgatgcgaagacg 150 Query: 146 agaactggtggtgcaaatggntcaattagatacgaggaagagtacacccatggtt 200 | ||||| || ||||||| || ||||| |||| ||||||| || |||||||| Sbjct: 151 aagactggaggaccaaatggttccattaggaacgacgaagagttcagccatggtt 205 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 249 cgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttg 308 |||| |||| |||||| |||||||||||||| | |||||||| || || || ||||||| Sbjct: 254 cgaaacatcaaaagatcacatatgcagacctctaccagcttgctggtgttgtcgcagttg 313 Query: 309 aagtcaccgggggtccaaccgttga 333 ||||||| || || |||||| |||| Sbjct: 314 aagtcactggaggaccaaccattga 338
>gb|AF139190.1|AF139190 Mesembryanthemum crystallinum cytosolic ascorbate peroxidase mRNA, complete cds Length = 1238 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 atccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtca 314 |||||||||| |||||||| ||||| |||||||||| || || |||||||||||||||| Sbjct: 370 atccaaagatcacatatgctgacctatatcagcttgctggtgttgttgcagttgaagtca 429 Query: 315 c 315 | Sbjct: 430 c 430 Score = 52.0 bits (26), Expect = 0.001 Identities = 85/105 (80%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 145 ||||| || ||||||||||||||||| ||||| || ||||| || ||| || ||| || Sbjct: 201 tgcgctcctatcatgctccgcctcgcgtggcacgacgctgggacgtattgtgcgaagacg 260 Query: 146 agaactggtggtgcaaatggntcaattagatacgaggaagagtac 190 | ||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 261 aaaaccggtggcgctaatggctccattaggaacgaggaagagtac 305
>gb|DQ124021.1| Coffea arabica clone MN-SSH3-B11 mRNA sequence Length = 221 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 253 gcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagt 312 ||||||||||||||| ||||| |||||| | |||||||| || || ||||| |||||||| Sbjct: 67 gcatccaaagattacttatgcggacctttaccagcttgcaggtgttgttgctgttgaagt 126
>gb|AY466858.1| Vigna unguiculata peroxisomal ascorbate peroxidase mRNA, complete cds Length = 1169 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 254 catccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtc 313 ||||| |||||||| |||||||| ||| | |||||||| || || ||||||||||| || Sbjct: 389 catcctaagattacgtatgcagatctttaccagcttgctggtgttgttgcagttgaggtt 448 Query: 314 accgggggtcc 324 || |||||||| Sbjct: 449 acggggggtcc 459
>ref|NM_119763.2| Arabidopsis thaliana L-ascorbate peroxidase/ peroxidase AT4G35970 mRNA, complete cds Length = 973 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 181
>gb|AF441714.1| Arabidopsis thaliana putative ascorbate peroxidase APX5 (AT4g35970) mRNA, partial cds Length = 784 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 38 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 83
>gb|AF039953.1|AF039953 Fragaria x ananassa cytosolic ascorbate peroxidase (ApxSC) mRNA, complete cds Length = 1040 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 175 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 220
>gb|AF159633.1|AF159633 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX26 allele, complete cds Length = 1035 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 208
>gb|AF159632.1|AF159632 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX22 allele, complete cds Length = 1065 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb|AF159631.1|AF159631 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX19 allele, complete cds Length = 1051 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 208
>gb|AF159630.1|AF159630 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX42 allele, complete cds Length = 1035 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb|AF159629.1|AF159629 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX27 allele, complete cds Length = 1030 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 171 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 216
>gb|AF159628.1|AF159628 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX44 allele, complete cds Length = 1040 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb|AF159627.1|AF159627 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX18 allele, complete cds Length = 1012 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 148 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 193
>gb|BT006053.1| Arabidopsis thaliana clone U51359 putative ascorbate peroxidase (At4g35970) mRNA, complete cds Length = 871 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 91 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 136
>gb|AF022213.1|AF022213 Fragaria x ananassa cytosolic ascorbate peroxidase (APX-c) mRNA, complete cds Length = 1044 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 167 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 212
>dbj|AK119023.1| Arabidopsis thaliana At4g35970 mRNA for putative ascorbate peroxidase, complete cds, clone: RAFL21-34-M19 Length = 973 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 181
>dbj|D49679.1| Spinach mRNA for ascorbate peroxidase, complete cds Length = 1132 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 263 attacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtcaccgggggt 322 ||||||||||| |||||| ||||||| || ||| | |||||||| ||||| ||||| ||| Sbjct: 288 attacatatgctgacctttatcagctagctggaattgttgcagtagaagtaaccggaggt 347 Query: 323 cc 324 || Sbjct: 348 cc 349
>emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate peroxidase Length = 1042 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggca 117 |||||||| |||||||||||||||||||||| Sbjct: 165 tgcgccccgctcatgctccgcctcgcatggca 196
>gb|AY104492.1| Zea mays PCO104002 mRNA sequence Length = 1052 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggca 117 |||||||| |||||||||||||||||||||| Sbjct: 179 tgcgccccgctcatgctccgcctcgcatggca 210
>gb|U37060.1|GHU37060 Gossypium hirsutum ascorbate peroxidase mRNA, complete cds Length = 1239 Score = 48.1 bits (24), Expect = 0.019 Identities = 66/80 (82%) Strand = Plus / Plus Query: 254 catccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtc 313 ||||| || ||||| ||||||||||| | |||||||| || || ||||| ||||||||| Sbjct: 349 catcctaaaattacgtatgcagacctataccagcttgctggtgttgttgctgttgaagtc 408 Query: 314 accgggggtccaaccgttga 333 || || ||||| ||| |||| Sbjct: 409 actggaggtcctaccattga 428
>ref|NM_119666.2| Arabidopsis thaliana APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase AT4G35000 (APX3) mRNA, complete cds Length = 1213 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 261 atcatgctccgattggcatggcacgatgctggaacctatgatg 303
>gb|BT016458.1| Zea mays clone Contig291 mRNA sequence Length = 1269 Score = 46.1 bits (23), Expect = 0.077 Identities = 50/59 (84%) Strand = Plus / Plus Query: 59 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 ||||| |||||||||||| ||| | ||||| ||| |||||||||||||||| ||||| Sbjct: 158 ctccgcgccctcatcgccgagaagagctgcgcgcccctcatgctccgcctcgcgtggca 216
>gb|AF442387.1| Capsicum annuum ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 catccaaagattacatatgcaga 276 ||||||||||||||||||||||| Sbjct: 279 catccaaagattacatatgcaga 301
>emb|X98276.1|ATAPEXT A.thaliana mRNA for ascorbate peroxidase, extraplastidal (membrane bound) (APX3) Length = 1045 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 103 atcatgctccgattggcatggcacgatgctggaacctatgatg 145
>emb|X98003.1|ATAPX A.thaliana mRNA for ascorbate peroxidase Length = 1127 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 167 atcatgctccgattggcatggcacgatgctggaacctatgatg 209
>emb|AJ843990.1| Plantago major mRNA for ascorbate peroxidase (apx1 gene) Length = 1100 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 98 atgctccgcctcgcatggcatgatgctggcacctatgatgtga 140 |||||||| ||||| |||||||||||||| || ||||| |||| Sbjct: 166 atgctccgtctcgcctggcatgatgctggaacgtatgacgtga 208
>gb|AY081646.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g35000) mRNA, complete cds Length = 1030 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 97 atcatgctccgattggcatggcacgatgctggaacctatgatg 139
>gb|AY065143.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g35000; M4E13.60) mRNA, complete cds Length = 1121 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 185 atcatgctccgattggcatggcacgatgctggaacctatgatg 227
>emb|BX828485.1|CNS0A4AX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2260 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 159 atcatgctccgattggcatggcacgatgctggaacctatgatg 201
>gb|AY086162.1| Arabidopsis thaliana clone 21896 mRNA, complete sequence Length = 1160 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 211 atcatgctccgattggcatggcacgatgctggaacctatgatg 253
>gb|U69138.1|ATU69138 Arabidopsis thaliana ascorbate peroxidase 3 (APX3) mRNA, complete cds Length = 1177 Score = 46.1 bits (23), Expect = 0.077 Identities = 38/43 (88%) Strand = Plus / Plus Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 223 atcatgctccgattggcatggcacgatgctggaacctatgatg 265
>ref|XM_479627.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>ref|XM_506596.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E10.12 mRNA Length = 1392 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>emb|X78452.1|RSAPX R.sativus (Fakir) APX mRNA for L-ascorbate peroxidase Length = 753 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cccatcatgctccgcctcgcatggca 117 ||||||||| |||||||||||||||| Sbjct: 100 cccatcatggtccgcctcgcatggca 125
>dbj|AB053297.1| Oryza sativa (japonica cultivar-group) APXb mRNA for L-ascorbate peroxidase, complete cds Length = 1160 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 160 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 205
>dbj|AK122175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L03, full insert sequence Length = 2982 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 170 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 215
>dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K23, full insert sequence Length = 2215 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj|AK068430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156P11, full insert sequence Length = 1393 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>dbj|AK061715.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H06, full insert sequence Length = 1110 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj|AB077953.1| Euglena gracilis apx mRNA for ascorbate peroxidase, partial cds Length = 1326 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Plus Query: 80 aagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggcac 129 ||||| |||||||||||| || ||||||| || ||||| || |||||||| Sbjct: 151 aagggctgcgcccccatcctgatccgcctggcgtggcacgacgctggcac 200
>dbj|AB050724.1| Oryza sativa (japonica cultivar-group) APXb mRNA for ascorbate peroxidase, complete cds Length = 1058 Score = 44.1 bits (22), Expect = 0.30 Identities = 40/46 (86%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 155 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 200
>ref|XM_470658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 73 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 125
>gb|AY254495.1| Oryza sativa (indica cultivar-group) ascorbate peroxidase mRNA, complete cds Length = 806 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 86 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 138
>dbj|AB125635.1| Brassica oleracea BO-sAPX mRNA for stromal ascorbate peroxidase, complete cds Length = 1430 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 atggcatgatgctggcaccta 132 ||||||||||||||||||||| Sbjct: 424 atggcatgatgctggcaccta 444
>dbj|AK061841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E04, full insert sequence Length = 1070 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 138 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 190
>dbj|D45423.1| Rice mRNA for ascorbate peroxidase, complete cds Length = 983 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 112 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 164
>ref|XM_519751.1| PREDICTED: Pan troglodytes LOC464166 (LOC464166), mRNA Length = 2721 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 1883 gagtacacccatggttcaaa 1864
>gb|AC103686.4| Homo sapiens chromosome 8, clone CTD-2655I2, complete sequence Length = 176584 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 173409 gagtacacccatggttcaaa 173428
>emb|AL121823.12|HSBB212L9 Human DNA sequence from clone RP13-212L9 on chromosome X Contains a novel gene, complete sequence Length = 185156 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 aattgctattgatctccttg 236 |||||||||||||||||||| Sbjct: 63803 aattgctattgatctccttg 63822
>emb|AL049699.8|HSJ747H23 Human DNA sequence from clone RP4-747H23 on chromosome 6q13-15 Contains the 3' end of the ME1 gene for malic enzyme 1 (NADP(+)-dependent, cytosolic), a novel gene, the 5' end of the AGM1 gene for N-acetylglucosamine-phosphate mutase and two CpG islands, complete sequence Length = 114201 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tggcttaaaaattgctattg 227 |||||||||||||||||||| Sbjct: 64862 tggcttaaaaattgctattg 64881
>gb|AY316117.1| Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC) gene, complete cds Length = 187059 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 30473 gagtacacccatggttcaaa 30454
>ref|NM_006904.6| Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC), mRNA Length = 13509 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 2000 gagtacacccatggttcaaa 1981
>dbj|AB254809.1| Cryptomeria japonica mRNA for putative ascorbate peroxidase, complete cds Length = 1012 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 ctcgcatggcatgatgctggcacctatgatgt 138 ||||||||||||| |||||| || |||||||| Sbjct: 155 ctcgcatggcatgctgctgggacttatgatgt 186
>gb|AC021236.10| Homo sapiens chromosome 8, clone RP11-113H14, complete sequence Length = 162259 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 135416 gagtacacccatggttcaaa 135397
>gb|U63630.4|HSU63630 Homo sapiens MCM4 (MCM4) and DNA-PKcs (PRKDC) genes, partial cds Length = 93443 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 43767 gagtacacccatggttcaaa 43748
>ref|XM_940235.1| PREDICTED: Homo sapiens similar to protein kinase, DNA-activated, catalytic polypeptide (LOC651106), mRNA Length = 11850 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 1502 gagtacacccatggttcaaa 1483
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 86 tgcgcccccatcatgctccgcctcgcatggca 117 ||||| ||| |||||||||||||||| ||||| Sbjct: 174 tgcgcgcccctcatgctccgcctcgcgtggca 205
>gb|U47077.5|HSU47077 Homo sapiens DNA-dependent protein kinase catalytic subunit (DNA-PKcs) mRNA, complete cds Length = 13509 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 2000 gagtacacccatggttcaaa 1981
>gb|U34994.3|HSU34994 Homo sapiens DNA dependent protein kinase catalytic subunit (PRKDC) mRNA, complete cds; alternatively spliced Length = 12783 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagtacacccatggttcaaa 204 |||||||||||||||||||| Sbjct: 1995 gagtacacccatggttcaaa 1976
>emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in linkage group 20, complete sequence Length = 116609 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ttaaaaattgctattgatct 231 |||||||||||||||||||| Sbjct: 82726 ttaaaaattgctattgatct 82707
>gb|AF079512.1|AF079512 Mesembryanthemum crystallinum clone R6-R11 ascorbate peroxidase mRNA, complete cds Length = 1022 Score = 40.1 bits (20), Expect = 4.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatga 135 ||||||| |||||| ||| ||||||||||| |||||||| Sbjct: 146 tcatgcttcgcctctcattccatgatgctggtacctatga 185
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gttgcagttgaagtcaccgg 318 |||||||||||||||||||| Sbjct: 2557852 gttgcagttgaagtcaccgg 2557833 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,538,582 Number of Sequences: 3902068 Number of extensions: 2538582 Number of successful extensions: 44183 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43995 Number of HSP's gapped (non-prelim): 187 length of query: 357 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 335 effective length of database: 17,147,199,772 effective search space: 5744311923620 effective search space used: 5744311923620 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)