Clone Name
basdg07
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ...
694
0.0
2 ref|XM_483666.1| Oryza sativa (japonica cultivar-group), mRNA
426
e-116
3 ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group...
426
e-116
4 dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clon...
418
e-114
5 dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clon...
418
e-114
6 gb|BT016732.1| Zea mays clone Contig565 mRNA sequence
377
e-101
7 gb|AY109419.1| Zea mays CL26634_1 mRNA sequence
256
4e-65
8 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
157
3e-35
9 dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic D...
157
3e-35
10 gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL03...
153
5e-34
11 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
153
5e-34
12 dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D...
153
5e-34
13 gb|AF159254.1|AF159254 Zantedeschia aethiopica ascorbate peroxid...
133
4e-28
14 ref|XM_474945.1| Oryza sativa (japonica cultivar-group), predic...
92
1e-15
15 gb|AY382617.1| Oryza sativa (indica cultivar-group) putative per...
90
6e-15
16 emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4,...
80
6e-12
17 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
80
6e-12
18 dbj|AK108458.1| Oryza sativa (japonica cultivar-group) cDNA clon...
78
2e-11
19 gb|DQ078123.1| Rheum australe ascorbate peroxidase mRNA, complet...
72
1e-09
20 gb|AF139190.1|AF139190 Mesembryanthemum crystallinum cytosolic a...
66
8e-08
21 gb|DQ124021.1| Coffea arabica clone MN-SSH3-B11 mRNA sequence
56
8e-05
22 gb|AY466858.1| Vigna unguiculata peroxisomal ascorbate peroxidas...
54
3e-04
23 ref|NM_119763.2| Arabidopsis thaliana L-ascorbate peroxidase/ pe...
52
0.001
24 gb|AF441714.1| Arabidopsis thaliana putative ascorbate peroxidas...
52
0.001
25 gb|AF039953.1|AF039953 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
26 gb|AF159633.1|AF159633 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
27 gb|AF159632.1|AF159632 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
28 gb|AF159631.1|AF159631 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
29 gb|AF159630.1|AF159630 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
30 gb|AF159629.1|AF159629 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
31 gb|AF159628.1|AF159628 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
32 gb|AF159627.1|AF159627 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
33 gb|BT006053.1| Arabidopsis thaliana clone U51359 putative ascorb...
52
0.001
34 gb|AF022213.1|AF022213 Fragaria x ananassa cytosolic ascorbate p...
52
0.001
35 dbj|AK119023.1| Arabidopsis thaliana At4g35970 mRNA for putative...
52
0.001
36 dbj|D49679.1| Spinach mRNA for ascorbate peroxidase, complete cds
52
0.001
37 emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate...
48
0.019
38 gb|AY104492.1| Zea mays PCO104002 mRNA sequence
48
0.019
39 gb|U37060.1|GHU37060 Gossypium hirsutum ascorbate peroxidase mRN...
48
0.019
40 ref|NM_119666.2| Arabidopsis thaliana APX3 (ASCORBATE PEROXIDASE...
46
0.077
41 gb|BT016458.1| Zea mays clone Contig291 mRNA sequence
46
0.077
42 gb|AF442387.1| Capsicum annuum ascorbate peroxidase mRNA, comple...
46
0.077
43 emb|X98276.1|ATAPEXT A.thaliana mRNA for ascorbate peroxidase, e...
46
0.077
44 emb|X98003.1|ATAPX A.thaliana mRNA for ascorbate peroxidase
46
0.077
45 emb|AJ843990.1| Plantago major mRNA for ascorbate peroxidase (ap...
46
0.077
46 gb|AY081646.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g...
46
0.077
47 gb|AY065143.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g...
46
0.077
48 emb|BX828485.1|CNS0A4AX Arabidopsis thaliana Full-length cDNA Co...
46
0.077
49 gb|AY086162.1| Arabidopsis thaliana clone 21896 mRNA, complete s...
46
0.077
50 gb|U69138.1|ATU69138 Arabidopsis thaliana ascorbate peroxidase 3...
46
0.077
51 ref|XM_479627.1| Oryza sativa (japonica cultivar-group), mRNA
44
0.30
52 ref|XM_506596.1| PREDICTED Oryza sativa (japonica cultivar-group...
44
0.30
53 emb|X78452.1|RSAPX R.sativus (Fakir) APX mRNA for L-ascorbate pe...
44
0.30
54 dbj|AB053297.1| Oryza sativa (japonica cultivar-group) APXb mRNA...
44
0.30
55 dbj|AK122175.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.30
56 dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.30
57 dbj|AK068430.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.30
58 dbj|AK061715.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.30
59 dbj|AB077953.1| Euglena gracilis apx mRNA for ascorbate peroxida...
44
0.30
60 dbj|AB050724.1| Oryza sativa (japonica cultivar-group) APXb mRNA...
44
0.30
61 ref|XM_470658.1| Oryza sativa (japonica cultivar-group), predic...
42
1.2
62 gb|AY254495.1| Oryza sativa (indica cultivar-group) ascorbate pe...
42
1.2
63 dbj|AB125635.1| Brassica oleracea BO-sAPX mRNA for stromal ascor...
42
1.2
64 dbj|AK061841.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
1.2
65 dbj|D45423.1| Rice mRNA for ascorbate peroxidase, complete cds
42
1.2
66 ref|XM_519751.1| PREDICTED: Pan troglodytes LOC464166 (LOC464166...
40
4.7
67 gb|AC103686.4| Homo sapiens chromosome 8, clone CTD-2655I2, comp...
40
4.7
68 emb|AL121823.12|HSBB212L9 Human DNA sequence from clone RP13-212...
40
4.7
69 emb|AL049699.8|HSJ747H23 Human DNA sequence from clone RP4-747H2...
40
4.7
70 gb|AY316117.1| Homo sapiens protein kinase, DNA-activated, catal...
40
4.7
71 ref|NM_006904.6| Homo sapiens protein kinase, DNA-activated, cat...
40
4.7
72 dbj|AB254809.1| Cryptomeria japonica mRNA for putative ascorbate...
40
4.7
73 gb|AC021236.10| Homo sapiens chromosome 8, clone RP11-113H14, co...
40
4.7
74 gb|U63630.4|HSU63630 Homo sapiens MCM4 (MCM4) and DNA-PKcs (PRKD...
40
4.7
75 ref|XM_940235.1| PREDICTED: Homo sapiens similar to protein kina...
40
4.7
76 gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA...
40
4.7
77 gb|U47077.5|HSU47077 Homo sapiens DNA-dependent protein kinase c...
40
4.7
78 gb|U34994.3|HSU34994 Homo sapiens DNA dependent protein kinase c...
40
4.7
79 emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in ...
40
4.7
80 gb|AF079512.1|AF079512 Mesembryanthemum crystallinum clone R6-R1...
40
4.7
81 gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
40
4.7
>dbj| AB063117.1 | Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate
peroxidase, complete cds
Length = 1089
Score = 694 bits (350), Expect = 0.0
Identities = 355/357 (99%)
Strand = Plus / Plus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 21 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcctt 80
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatga 140
Query: 121 tgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 141 tgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatacga 200
Query: 181 ggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcc 260
Query: 241 tattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagt 320
Query: 301 tgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 377
>ref| XM_483666.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1158
Score = 426 bits (215), Expect = e-116
Identities = 316/350 (90%)
Strand = Plus / Plus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 116 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 175
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127
|||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 176 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 235
Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187
|| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 236 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 295
Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247
||||| || |||||||||||||| |||| |||||||||||||| || ||||||||||||
Sbjct: 296 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaa 355
Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307
|| ||| || ||||| |||||||| |||||| |||||||||| ||||| |||||||||
Sbjct: 356 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 415
Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
||||| || ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 416 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 465
>ref| XM_507324.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B11.9 mRNA
Length = 1229
Score = 426 bits (215), Expect = e-116
Identities = 316/350 (90%)
Strand = Plus / Plus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 127 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 186
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127
|||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 187 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 246
Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187
|| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 247 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 306
Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247
||||| || |||||||||||||| |||| |||||||||||||| || ||||||||||||
Sbjct: 307 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaa 366
Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307
|| ||| || ||||| |||||||| |||||| |||||||||| ||||| |||||||||
Sbjct: 367 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 426
Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
||||| || ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 427 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 476
>dbj| AK104490.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B09, full
insert sequence
Length = 1158
Score = 418 bits (211), Expect = e-114
Identities = 315/350 (90%)
Strand = Plus / Plus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 116 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 175
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127
|||||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 176 ctcatcttctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 235
Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187
|| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 236 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 295
Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247
||||| || |||||||||||||| |||| |||||||||||||| || ||||||||||||
Sbjct: 296 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaa 355
Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307
|| ||| || ||||| |||||||| |||||| |||||||||| ||||| |||||||||
Sbjct: 356 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 415
Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
||||| || ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 416 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 465
>dbj| AK070842.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023074O14, full
insert sequence
Length = 1229
Score = 418 bits (211), Expect = e-114
Identities = 315/350 (90%)
Strand = Plus / Plus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 127 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 186
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggc 127
|||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 187 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggc 246
Query: 128 acctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaagag 187
|| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 247 acttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagag 306
Query: 188 tacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctattaaa 247
||||| || |||||||||||||| |||| |||||||||||||| || ||||| ||||||
Sbjct: 307 tacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcccattaaa 366
Query: 248 gcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagtt 307
|| ||| || ||||| |||||||| |||||| |||||||||| ||||| |||||||||
Sbjct: 367 gccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagtt 426
Query: 308 gaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
||||| || ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 427 gaagttactgggggtccaactgttgagttcattcctggaagacgtgattc 476
>gb| BT016732.1 | Zea mays clone Contig565 mRNA sequence
Length = 1248
Score = 377 bits (190), Expect = e-101
Identities = 315/357 (88%)
Strand = Plus / Plus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
||||||||| |||| |||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 139 ggcggctcccatggtcgacgccgaatacctgcgccaggtcgacagggcgcgccgccacct 198
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatga 120
||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 199 ccgcgccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatggcatga 258
Query: 121 tgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacga 180
|||||| || ||||| |||| |||| |||||||||||||||||| || |||||||| ||
Sbjct: 259 tgctggaacttatgacctgaagacaaaaactggtggtgcaaatggttcgattagatatga 318
Query: 181 ggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcc 240
||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 319 agaagagtacactcatggttcaaatgctggtttaaagattgctatcgatctccttgagcc 378
Query: 241 tattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagt 300
||| ||||| ||| |||||||||| |||||||||||||| |||||||||| ||||| ||
Sbjct: 379 tatcaaagcaaagaatccaaagataacatatgcagacctgtatcagcttgctggagtggt 438
Query: 301 tgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
|||||| ||||| || ||||| ||||| ||||| || || ||||| |||||||||||
Sbjct: 439 tgcagtcgaagtgactggggggccaactgttgaatttattcctggcagacgtgattc 495
>gb| AY109419.1 | Zea mays CL26634_1 mRNA sequence
Length = 1373
Score = 256 bits (129), Expect = 4e-65
Identities = 249/293 (84%)
Strand = Plus / Minus
Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgct 124
||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1206 gccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatggcatgatgct 1147
Query: 125 ggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaattagatacgaggaa 184
|| || ||||| |||| || |||||||||||||||| || |||||||| || |||
Sbjct: 1146 ggaacttatgacctgaagacnnnnnctggtggtgcaaatggttcgattagatatgaagaa 1087
Query: 185 gagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctatt 244
|||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 1086 gagtacactcatggttcaaatgctggtttaaagattgctatcgatctccttgagcctatc 1027
Query: 245 aaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgca 304
||||| ||| |||||||||| |||||||||||||| |||||||||| ||||| ||||||
Sbjct: 1026 aaagcaaagaatccaaagataacatatgcagacctgtatcagcttgctggagtggttgca 967
Query: 305 gttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattc 357
|| ||||| || ||||| ||||| || || ||||| |||||||||||
Sbjct: 966 gtcgaagtgactnnnnnnccaactgttgaatttattcctggcagacgtgattc 914
Score = 56.0 bits (28), Expect = 8e-05
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgaca 44
||||||||| |||| |||||||| |||||||||||||||||||
Sbjct: 1270 ggcggctcccatggtcgacgccgaatacctgcgccaggtcgaca 1227
>dbj| AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 157 bits (79), Expect = 3e-35
Identities = 103/111 (92%)
Strand = Plus / Minus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |||
Sbjct: 20903598 ggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgacct 20903539
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111
||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 20903538 ccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 20903488
Score = 131 bits (66), Expect = 2e-27
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171
|||||||||||||||||| ||||||| || |||| |||| | ||||||||||| |||||
Sbjct: 20901812 atggcatgatgctggcacatatgatgcaaaaacaaaaactaggggtgcaaatggttcaat 20901753
Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231
||| | |||||||||||||| ||||||||||||||||| |||||||||| ||||||||
Sbjct: 20901752 taggcatgaggaagagtacactcatggttcaaatgctggactaaaaattgccattgatct 20901693
Query: 232 ccttg 236
|||||
Sbjct: 20901692 ccttg 20901688
Score = 61.9 bits (31), Expect = 1e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttga 333
||||||||| ||||| |||||||||||||| || || ||||||||||||||
Sbjct: 20900418 tcagcttgctggagtggttgcagttgaagttactggaggtccaaccgttga 20900368
>dbj| AP006174.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0229B10
Length = 114509
Score = 157 bits (79), Expect = 3e-35
Identities = 103/111 (92%)
Strand = Plus / Minus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |||
Sbjct: 95824 ggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgacct 95765
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111
||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 95764 ccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 95714
Score = 131 bits (66), Expect = 2e-27
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171
|||||||||||||||||| ||||||| || |||| |||| | ||||||||||| |||||
Sbjct: 94038 atggcatgatgctggcacatatgatgcaaaaacaaaaactaggggtgcaaatggttcaat 93979
Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231
||| | |||||||||||||| ||||||||||||||||| |||||||||| ||||||||
Sbjct: 93978 taggcatgaggaagagtacactcatggttcaaatgctggactaaaaattgccattgatct 93919
Query: 232 ccttg 236
|||||
Sbjct: 93918 ccttg 93914
Score = 61.9 bits (31), Expect = 1e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttga 333
||||||||| ||||| |||||||||||||| || || ||||||||||||||
Sbjct: 92644 tcagcttgctggagtggttgcagttgaagttactggaggtccaaccgttga 92594
>gb| AY459336.1 | Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene
region
Length = 65993
Score = 153 bits (77), Expect = 5e-34
Identities = 109/120 (90%)
Strand = Plus / Minus
Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171
||||||||| || ||||| ||||| |||||||||| |||||||||||||||||| |||||
Sbjct: 55926 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 55867
Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231
||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||
Sbjct: 55866 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 55807
Score = 135 bits (68), Expect = 1e-28
Identities = 95/104 (91%)
Strand = Plus / Minus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| || || |||
Sbjct: 56985 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccaacttcgcgcc 56926
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 56925 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 56882
Score = 91.7 bits (46), Expect = 1e-15
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 284 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 343
|||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 55136 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 55077
Query: 344 ggaagacgtg 353
||||||||||
Sbjct: 55076 ggaagacgtg 55067
>dbj| AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 153 bits (77), Expect = 5e-34
Identities = 109/120 (90%)
Strand = Plus / Minus
Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171
||||||||| || ||||| ||||| |||||||||| |||||||||||||||||| |||||
Sbjct: 27550886 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 27550827
Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231
||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||
Sbjct: 27550826 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 27550767
Score = 151 bits (76), Expect = 2e-33
Identities = 97/104 (93%)
Strand = Plus / Minus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 27551945 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 27551886
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 27551885 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 27551842
Score = 91.7 bits (46), Expect = 1e-15
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 284 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 343
|||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 27550096 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 27550037
Query: 344 ggaagacgtg 353
||||||||||
Sbjct: 27550036 ggaagacgtg 27550027
>dbj| AP003912.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1479_B11
Length = 105702
Score = 153 bits (77), Expect = 5e-34
Identities = 109/120 (90%)
Strand = Plus / Minus
Query: 112 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggntcaat 171
||||||||| || ||||| ||||| |||||||||| |||||||||||||||||| |||||
Sbjct: 33176 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 33117
Query: 172 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 231
||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||
Sbjct: 33116 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 33057
Score = 151 bits (76), Expect = 2e-33
Identities = 97/104 (93%)
Strand = Plus / Minus
Query: 8 ccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccctccgtgcc 67
||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 34235 ccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgcc 34176
Query: 68 ctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 111
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 34175 ctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 34132
Score = 91.7 bits (46), Expect = 1e-15
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 284 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 343
|||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 32386 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 32327
Query: 344 ggaagacgtg 353
||||||||||
Sbjct: 32326 ggaagacgtg 32317
>gb| AF159254.1 |AF159254 Zantedeschia aethiopica ascorbate peroxidase (cmApx) mRNA, complete
cds
Length = 1167
Score = 133 bits (67), Expect = 4e-28
Identities = 222/274 (81%)
Strand = Plus / Plus
Query: 36 aggtcgacagggcgcgccgcgccctccgtgccctcatcgcctccaagggatgcgccccca 95
||||||||| ||||||| | | |||||| |||||||||||| |||| ||||| |||
Sbjct: 89 aggtcgacaaggcgcgcagggacctccgcgccctcatcgccagcaagaactgcgctcccg 148
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacacaagaactggtg 155
||||||||||||| |||||||||||||||||||| ||||||||||| |||| || ||||
Sbjct: 149 tcatgctccgcctagcatggcatgatgctggcacttatgatgtgaaaacaaagacaggtg 208
Query: 156 gtgcaaatggntcaattagatacgaggaagagtacacccatggttcaaatgctggcttaa 215
|| ||||||| ||||| ||| | ||||||||| ||| ||||| |||||||||| ||||
Sbjct: 209 gtccaaatggttcaatcagaaatgaggaagagcacaaacatggcgcaaatgctgggttaa 268
Query: 216 aaattgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcag 275
| || || || ||||| ||| | | || || || ||||||| ||| |||||||| |
Sbjct: 269 agatagccatagatctttgtgaaacggtgaaggcaaaacatccaaggataacatatgctg 328
Query: 276 accttcatcagcttgccggagtagttgcagttga 309
||||| | |||||||| ||||| || ||||||||
Sbjct: 329 acctttaccagcttgctggagttgtcgcagttga 362
>ref| XM_474945.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 876
Score = 91.7 bits (46), Expect = 1e-15
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 218 attgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagac 277
|||||||||||||| || || || || ||| ||||||||| |||||||| ||||| |||
Sbjct: 223 attgctattgatctgctagaaccgatgaaacagaagcatcccaagattacctatgctgac 282
Query: 278 cttcatcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327
|| |||||||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 283 ctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 332
Score = 81.8 bits (41), Expect = 1e-12
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
|||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| |||
Sbjct: 6 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 65
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
|| |||||||||||| |||| | ||||| ||||||||||||||||| || |||||
Sbjct: 66 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggca 122
>gb| AY382617.1 | Oryza sativa (indica cultivar-group) putative peroxisome-bound
ascorbate peroxidase (APx3) mRNA, complete cds
Length = 1060
Score = 89.7 bits (45), Expect = 6e-15
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
|||||| |||||||||||||| |||||| || ||||||| ||||||||||||| |||
Sbjct: 45 ggcggcgccggtggtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 104
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
|| |||||||||||| |||| | ||||| ||||||||||||||||| || |||||
Sbjct: 105 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggca 161
Score = 83.8 bits (42), Expect = 4e-13
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 218 attgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagac 277
|||||||||||||| || || || || ||| || |||||| |||||||| ||||| |||
Sbjct: 262 attgctattgatctgctagaaccgatgaaacagaggcatcccaagattacctatgctgac 321
Query: 278 cttcatcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327
|| |||||||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 322 ctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 371
>emb| AL606634.2 |OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21,
complete sequence
Length = 130433
Score = 79.8 bits (40), Expect = 6e-12
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
|||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| |||
Sbjct: 11191 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 11132
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcct 108
|| |||||||||||| |||| | ||||| |||||||||||||||||
Sbjct: 11131 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcct 11084
Score = 58.0 bits (29), Expect = 2e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327
||||||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 10318 tcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 10274
>dbj| AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 79.8 bits (40), Expect = 6e-12
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 1 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 60
|||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| |||
Sbjct: 8200678 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 8200619
Query: 61 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcct 108
|| |||||||||||| |||| | ||||| |||||||||||||||||
Sbjct: 8200618 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcct 8200571
Score = 58.0 bits (29), Expect = 2e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 283 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 327
||||||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 8199805 tcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 8199761
>dbj| AK108458.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D05, full
insert sequence
Length = 755
Score = 77.8 bits (39), Expect = 2e-11
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 251 aagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaa 310
||||||||||| || || ||||| || ||| |||||||||| ||||| ||||||||||||
Sbjct: 79 aagcatccaaatatcacttatgctgatctttatcagcttgctggagtggttgcagttgaa 138
Query: 311 gtcaccgggggtccaaccgttga 333
|| || || ||||||||||||||
Sbjct: 139 gttactggaggtccaaccgttga 161
>gb| DQ078123.1 | Rheum australe ascorbate peroxidase mRNA, complete cds
Length = 1192
Score = 71.9 bits (36), Expect = 1e-09
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 145
|||||||||||||||||||||||||| ||||| ||||| || || ||||||| ||| ||
Sbjct: 91 tgcgcccccatcatgctccgcctcgcgtggcacgatgccgggacatatgatgcgaagacg 150
Query: 146 agaactggtggtgcaaatggntcaattagatacgaggaagagtacacccatggtt 200
| ||||| || ||||||| || ||||| |||| ||||||| || ||||||||
Sbjct: 151 aagactggaggaccaaatggttccattaggaacgacgaagagttcagccatggtt 205
Score = 58.0 bits (29), Expect = 2e-05
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 249 cgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttg 308
|||| |||| |||||| |||||||||||||| | |||||||| || || || |||||||
Sbjct: 254 cgaaacatcaaaagatcacatatgcagacctctaccagcttgctggtgttgtcgcagttg 313
Query: 309 aagtcaccgggggtccaaccgttga 333
||||||| || || |||||| ||||
Sbjct: 314 aagtcactggaggaccaaccattga 338
>gb| AF139190.1 |AF139190 Mesembryanthemum crystallinum cytosolic ascorbate peroxidase mRNA,
complete cds
Length = 1238
Score = 65.9 bits (33), Expect = 8e-08
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 255 atccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtca 314
|||||||||| |||||||| ||||| |||||||||| || || ||||||||||||||||
Sbjct: 370 atccaaagatcacatatgctgacctatatcagcttgctggtgttgttgcagttgaagtca 429
Query: 315 c 315
|
Sbjct: 430 c 430
Score = 52.0 bits (26), Expect = 0.001
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 145
||||| || ||||||||||||||||| ||||| || ||||| || ||| || ||| ||
Sbjct: 201 tgcgctcctatcatgctccgcctcgcgtggcacgacgctgggacgtattgtgcgaagacg 260
Query: 146 agaactggtggtgcaaatggntcaattagatacgaggaagagtac 190
| ||| ||||| || ||||| || ||||| ||||||||||||||
Sbjct: 261 aaaaccggtggcgctaatggctccattaggaacgaggaagagtac 305
>gb| DQ124021.1 | Coffea arabica clone MN-SSH3-B11 mRNA sequence
Length = 221
Score = 56.0 bits (28), Expect = 8e-05
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 253 gcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagt 312
||||||||||||||| ||||| |||||| | |||||||| || || ||||| ||||||||
Sbjct: 67 gcatccaaagattacttatgcggacctttaccagcttgcaggtgttgttgctgttgaagt 126
>gb| AY466858.1 | Vigna unguiculata peroxisomal ascorbate peroxidase mRNA, complete
cds
Length = 1169
Score = 54.0 bits (27), Expect = 3e-04
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 254 catccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtc 313
||||| |||||||| |||||||| ||| | |||||||| || || ||||||||||| ||
Sbjct: 389 catcctaagattacgtatgcagatctttaccagcttgctggtgttgttgcagttgaggtt 448
Query: 314 accgggggtcc 324
|| ||||||||
Sbjct: 449 acggggggtcc 459
>ref| NM_119763.2 | Arabidopsis thaliana L-ascorbate peroxidase/ peroxidase AT4G35970
mRNA, complete cds
Length = 973
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||| |||||||| || |||||||||||||| || ||||||||||
Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 181
>gb| AF441714.1 | Arabidopsis thaliana putative ascorbate peroxidase APX5 (AT4g35970)
mRNA, partial cds
Length = 784
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||| |||||||| || |||||||||||||| || ||||||||||
Sbjct: 38 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 83
>gb| AF039953.1 |AF039953 Fragaria x ananassa cytosolic ascorbate peroxidase (ApxSC) mRNA,
complete cds
Length = 1040
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 175 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 220
>gb| AF159633.1 |AF159633 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX26 allele, complete cds
Length = 1035
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 208
>gb| AF159632.1 |AF159632 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX22 allele, complete cds
Length = 1065
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb| AF159631.1 |AF159631 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX19 allele, complete cds
Length = 1051
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 208
>gb| AF159630.1 |AF159630 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX42 allele, complete cds
Length = 1035
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb| AF159629.1 |AF159629 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX27 allele, complete cds
Length = 1030
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 171 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 216
>gb| AF159628.1 |AF159628 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX44 allele, complete cds
Length = 1040
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb| AF159627.1 |AF159627 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA,
APX18 allele, complete cds
Length = 1012
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 148 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 193
>gb| BT006053.1 | Arabidopsis thaliana clone U51359 putative ascorbate peroxidase
(At4g35970) mRNA, complete cds
Length = 871
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||| |||||||| || |||||||||||||| || ||||||||||
Sbjct: 91 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 136
>gb| AF022213.1 |AF022213 Fragaria x ananassa cytosolic ascorbate peroxidase (APX-c) mRNA,
complete cds
Length = 1044
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 141
|||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 167 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 212
>dbj| AK119023.1 | Arabidopsis thaliana At4g35970 mRNA for putative ascorbate
peroxidase, complete cds, clone: RAFL21-34-M19
Length = 973
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 92 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||| |||||||| || |||||||||||||| || ||||||||||
Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 181
>dbj| D49679.1 | Spinach mRNA for ascorbate peroxidase, complete cds
Length = 1132
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 263 attacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtcaccgggggt 322
||||||||||| |||||| ||||||| || ||| | |||||||| ||||| ||||| |||
Sbjct: 288 attacatatgctgacctttatcagctagctggaattgttgcagtagaagtaaccggaggt 347
Query: 323 cc 324
||
Sbjct: 348 cc 349
>emb| Z34934.1 |ZMAPXG Z.mays apx gene encoding cytosolic ascorbate peroxidase
Length = 1042
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggca 117
|||||||| ||||||||||||||||||||||
Sbjct: 165 tgcgccccgctcatgctccgcctcgcatggca 196
>gb| AY104492.1 | Zea mays PCO104002 mRNA sequence
Length = 1052
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggca 117
|||||||| ||||||||||||||||||||||
Sbjct: 179 tgcgccccgctcatgctccgcctcgcatggca 210
>gb| U37060.1 |GHU37060 Gossypium hirsutum ascorbate peroxidase mRNA, complete cds
Length = 1239
Score = 48.1 bits (24), Expect = 0.019
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 254 catccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtc 313
||||| || ||||| ||||||||||| | |||||||| || || ||||| |||||||||
Sbjct: 349 catcctaaaattacgtatgcagacctataccagcttgctggtgttgttgctgttgaagtc 408
Query: 314 accgggggtccaaccgttga 333
|| || ||||| ||| ||||
Sbjct: 409 actggaggtcctaccattga 428
>ref| NM_119666.2 | Arabidopsis thaliana APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate
peroxidase AT4G35000 (APX3) mRNA, complete cds
Length = 1213
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 261 atcatgctccgattggcatggcacgatgctggaacctatgatg 303
>gb| BT016458.1 | Zea mays clone Contig291 mRNA sequence
Length = 1269
Score = 46.1 bits (23), Expect = 0.077
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 59 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
||||| |||||||||||| ||| | ||||| ||| |||||||||||||||| |||||
Sbjct: 158 ctccgcgccctcatcgccgagaagagctgcgcgcccctcatgctccgcctcgcgtggca 216
>gb| AF442387.1 | Capsicum annuum ascorbate peroxidase mRNA, complete cds
Length = 1138
Score = 46.1 bits (23), Expect = 0.077
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 254 catccaaagattacatatgcaga 276
|||||||||||||||||||||||
Sbjct: 279 catccaaagattacatatgcaga 301
>emb| X98276.1 |ATAPEXT A.thaliana mRNA for ascorbate peroxidase, extraplastidal (membrane
bound) (APX3)
Length = 1045
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 103 atcatgctccgattggcatggcacgatgctggaacctatgatg 145
>emb| X98003.1 |ATAPX A.thaliana mRNA for ascorbate peroxidase
Length = 1127
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 167 atcatgctccgattggcatggcacgatgctggaacctatgatg 209
>emb| AJ843990.1 | Plantago major mRNA for ascorbate peroxidase (apx1 gene)
Length = 1100
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 98 atgctccgcctcgcatggcatgatgctggcacctatgatgtga 140
|||||||| ||||| |||||||||||||| || ||||| ||||
Sbjct: 166 atgctccgtctcgcctggcatgatgctggaacgtatgacgtga 208
>gb| AY081646.1 | Arabidopsis thaliana L-ascorbate peroxidase (At4g35000) mRNA,
complete cds
Length = 1030
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 97 atcatgctccgattggcatggcacgatgctggaacctatgatg 139
>gb| AY065143.1 | Arabidopsis thaliana L-ascorbate peroxidase (At4g35000; M4E13.60)
mRNA, complete cds
Length = 1121
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 185 atcatgctccgattggcatggcacgatgctggaacctatgatg 227
>emb| BX828485.1 |CNS0A4AX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH94ZG04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2260
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 159 atcatgctccgattggcatggcacgatgctggaacctatgatg 201
>gb| AY086162.1 | Arabidopsis thaliana clone 21896 mRNA, complete sequence
Length = 1160
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 211 atcatgctccgattggcatggcacgatgctggaacctatgatg 253
>gb| U69138.1 |ATU69138 Arabidopsis thaliana ascorbate peroxidase 3 (APX3) mRNA, complete
cds
Length = 1177
Score = 46.1 bits (23), Expect = 0.077
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 95 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 137
||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 223 atcatgctccgattggcatggcacgatgctggaacctatgatg 265
>ref| XM_479627.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1110
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>ref| XM_506596.1 | PREDICTED Oryza sativa (japonica cultivar-group), P0627E10.12 mRNA
Length = 1392
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>emb| X78452.1 |RSAPX R.sativus (Fakir) APX mRNA for L-ascorbate peroxidase
Length = 753
Score = 44.1 bits (22), Expect = 0.30
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 cccatcatgctccgcctcgcatggca 117
||||||||| ||||||||||||||||
Sbjct: 100 cccatcatggtccgcctcgcatggca 125
>dbj| AB053297.1 | Oryza sativa (japonica cultivar-group) APXb mRNA for L-ascorbate
peroxidase, complete cds
Length = 1160
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 160 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 205
>dbj| AK122175.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033148L03, full
insert sequence
Length = 2982
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 170 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 215
>dbj| AK102751.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033106K23, full
insert sequence
Length = 2215
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj| AK068430.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013156P11, full
insert sequence
Length = 1393
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>dbj| AK061715.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H06, full
insert sequence
Length = 1110
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj| AB077953.1 | Euglena gracilis apx mRNA for ascorbate peroxidase, partial cds
Length = 1326
Score = 44.1 bits (22), Expect = 0.30
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 80 aagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggcac 129
||||| |||||||||||| || ||||||| || ||||| || ||||||||
Sbjct: 151 aagggctgcgcccccatcctgatccgcctggcgtggcacgacgctggcac 200
>dbj| AB050724.1 | Oryza sativa (japonica cultivar-group) APXb mRNA for ascorbate
peroxidase, complete cds
Length = 1058
Score = 44.1 bits (22), Expect = 0.30
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 131
|||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 155 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 200
>ref| XM_470658.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 753
Score = 42.1 bits (21), Expect = 1.2
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
|||||||||||| ||| | |||||||| |||||||||||||||| |||||
Sbjct: 73 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 125
>gb| AY254495.1 | Oryza sativa (indica cultivar-group) ascorbate peroxidase mRNA,
complete cds
Length = 806
Score = 42.1 bits (21), Expect = 1.2
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
|||||||||||| ||| | |||||||| |||||||||||||||| |||||
Sbjct: 86 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 138
>dbj| AB125635.1 | Brassica oleracea BO-sAPX mRNA for stromal ascorbate peroxidase,
complete cds
Length = 1430
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 atggcatgatgctggcaccta 132
|||||||||||||||||||||
Sbjct: 424 atggcatgatgctggcaccta 444
>dbj| AK061841.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E04, full
insert sequence
Length = 1070
Score = 42.1 bits (21), Expect = 1.2
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
|||||||||||| ||| | |||||||| |||||||||||||||| |||||
Sbjct: 138 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 190
>dbj| D45423.1 | Rice mRNA for ascorbate peroxidase, complete cds
Length = 983
Score = 42.1 bits (21), Expect = 1.2
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 65 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 117
|||||||||||| ||| | |||||||| |||||||||||||||| |||||
Sbjct: 112 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 164
>ref| XM_519751.1 | PREDICTED: Pan troglodytes LOC464166 (LOC464166), mRNA
Length = 2721
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 1883 gagtacacccatggttcaaa 1864
>gb| AC103686.4 | Homo sapiens chromosome 8, clone CTD-2655I2, complete sequence
Length = 176584
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 173409 gagtacacccatggttcaaa 173428
>emb| AL121823.12 |HSBB212L9 Human DNA sequence from clone RP13-212L9 on chromosome X Contains a
novel gene, complete sequence
Length = 185156
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 217 aattgctattgatctccttg 236
||||||||||||||||||||
Sbjct: 63803 aattgctattgatctccttg 63822
>emb| AL049699.8 |HSJ747H23 Human DNA sequence from clone RP4-747H23 on chromosome 6q13-15 Contains
the 3' end of the ME1 gene for malic enzyme 1
(NADP(+)-dependent, cytosolic), a novel gene, the 5' end
of the AGM1 gene for N-acetylglucosamine-phosphate mutase
and two CpG islands, complete sequence
Length = 114201
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 208 tggcttaaaaattgctattg 227
||||||||||||||||||||
Sbjct: 64862 tggcttaaaaattgctattg 64881
>gb| AY316117.1 | Homo sapiens protein kinase, DNA-activated, catalytic polypeptide
(PRKDC) gene, complete cds
Length = 187059
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 30473 gagtacacccatggttcaaa 30454
>ref| NM_006904.6 | Homo sapiens protein kinase, DNA-activated, catalytic polypeptide
(PRKDC), mRNA
Length = 13509
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 2000 gagtacacccatggttcaaa 1981
>dbj| AB254809.1 | Cryptomeria japonica mRNA for putative ascorbate peroxidase,
complete cds
Length = 1012
Score = 40.1 bits (20), Expect = 4.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 107 ctcgcatggcatgatgctggcacctatgatgt 138
||||||||||||| |||||| || ||||||||
Sbjct: 155 ctcgcatggcatgctgctgggacttatgatgt 186
>gb| AC021236.10 | Homo sapiens chromosome 8, clone RP11-113H14, complete sequence
Length = 162259
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 135416 gagtacacccatggttcaaa 135397
>gb| U63630.4 |HSU63630 Homo sapiens MCM4 (MCM4) and DNA-PKcs (PRKDC) genes, partial cds
Length = 93443
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 43767 gagtacacccatggttcaaa 43748
>ref| XM_940235.1 | PREDICTED: Homo sapiens similar to protein kinase, DNA-activated,
catalytic polypeptide (LOC651106), mRNA
Length = 11850
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 1502 gagtacacccatggttcaaa 1483
>gb| AF411228.1 |AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds
Length = 1138
Score = 40.1 bits (20), Expect = 4.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 86 tgcgcccccatcatgctccgcctcgcatggca 117
||||| ||| |||||||||||||||| |||||
Sbjct: 174 tgcgcgcccctcatgctccgcctcgcgtggca 205
>gb| U47077.5 |HSU47077 Homo sapiens DNA-dependent protein kinase catalytic subunit
(DNA-PKcs) mRNA, complete cds
Length = 13509
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 2000 gagtacacccatggttcaaa 1981
>gb| U34994.3 |HSU34994 Homo sapiens DNA dependent protein kinase catalytic subunit (PRKDC)
mRNA, complete cds; alternatively spliced
Length = 12783
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 185 gagtacacccatggttcaaa 204
||||||||||||||||||||
Sbjct: 1995 gagtacacccatggttcaaa 1976
>emb| BX511244.8 | Zebrafish DNA sequence from clone DKEY-185L3 in linkage group 20,
complete sequence
Length = 116609
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 212 ttaaaaattgctattgatct 231
||||||||||||||||||||
Sbjct: 82726 ttaaaaattgctattgatct 82707
>gb| AF079512.1 |AF079512 Mesembryanthemum crystallinum clone R6-R11 ascorbate peroxidase
mRNA, complete cds
Length = 1022
Score = 40.1 bits (20), Expect = 4.7
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 96 tcatgctccgcctcgcatggcatgatgctggcacctatga 135
||||||| |||||| ||| ||||||||||| ||||||||
Sbjct: 146 tcatgcttcgcctctcattccatgatgctggtacctatga 185
>gb| CP000103.1 | Nitrosospira multiformis ATCC 25196, complete genome
Length = 3184243
Score = 40.1 bits (20), Expect = 4.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 299 gttgcagttgaagtcaccgg 318
||||||||||||||||||||
Sbjct: 2557852 gttgcagttgaagtcaccgg 2557833
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,538,582
Number of Sequences: 3902068
Number of extensions: 2538582
Number of successful extensions: 44183
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43995
Number of HSP's gapped (non-prelim): 187
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)