ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdg05 |
|---|---|
| Clone Library Name | barley_pub |
>LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precursor (EC| 3.4.21.-) Length = 885 Score = 299 bits (766), Expect = 2e-81 Identities = 148/153 (96%), Positives = 151/153 (98%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 PVLCFVGPPGVGKTSLA+SIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG Sbjct: 403 PVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 462 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK FNDHYLNVPFDLSKV+FV Sbjct: 463 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKAFNDHYLNVPFDLSKVIFV 522 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATANRMQPIPP LLDRME+IELPGYTPEEKLKI Sbjct: 523 ATANRMQPIPPPLLDRMEIIELPGYTPEEKLKI 555
>LONH1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precursor (EC| 3.4.21.-) Length = 875 Score = 286 bits (731), Expect = 2e-77 Identities = 139/153 (90%), Positives = 147/153 (96%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LCFVGPPGVGKTSLA SI+ AL RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG Sbjct: 403 PILCFVGPPGVGKTSLAASISAALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 462 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +KRV VSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP+DLSKV+FV Sbjct: 463 IKRVGVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPYDLSKVIFV 522 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATAN++QPIPP LLDRMEVIELPGYTPEEK +I Sbjct: 523 ATANKVQPIPPPLLDRMEVIELPGYTPEEKARI 555
>LONH1_ARATH (O64948) Lon protease homolog 1, mitochondrial precursor (EC| 3.4.21.-) Length = 888 Score = 284 bits (727), Expect = 7e-77 Identities = 140/153 (91%), Positives = 147/153 (96%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 PVLCFVGPPGVGKTSLA+SIA AL RKF+R+SLGGVKDEADIRGHRRTYIGSMPGRLIDG Sbjct: 402 PVLCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMPGRLIDG 461 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 LKRV V NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK+FNDHYLNVP+DLSKVVFV Sbjct: 462 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVVFV 521 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATANR+QPIPP LLDRME+IELPGYT EEKLKI Sbjct: 522 ATANRVQPIPPPLLDRMELIELPGYTQEEKLKI 554
>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)| Length = 826 Score = 234 bits (596), Expect = 1e-61 Identities = 109/153 (71%), Positives = 130/153 (84%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL S+AKA RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR I Sbjct: 372 PILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGGVRDEAEIRGHRRTYVGALPGRFIQS 431 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ NPVM+LDEIDK G+D RGDP++ALLEVLDPEQN TF+DHYL+VPFDLSKV+FV Sbjct: 432 MKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYLDVPFDLSKVMFV 491 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATAN++ PIP L DRME+IEL GYT EEK I Sbjct: 492 ATANQLDPIPGPLRDRMEIIELTGYTFEEKQSI 524
>LON1_MYXXA (P36773) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 817 Score = 226 bits (576), Expect = 2e-59 Identities = 109/153 (71%), Positives = 127/153 (83%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 PVLCFVGPPGVGKTSLA SIA+A RKF+R+SLGGV+DEA+IRGHRRTYIG+MPG+LI Sbjct: 362 PVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPGKLIQS 421 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 LK+ +NPV LLDEIDK +D RGDP++ALLEVLDPEQN TFNDHYL++ +DLSKV+F+ Sbjct: 422 LKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMFI 481 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN M IP L DRMEVI + GYT EKL I Sbjct: 482 CTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSI 514
>LON_ERWAM (P46067) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 221 bits (564), Expect = 5e-58 Identities = 110/153 (71%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIAKA RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + +V V NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FV Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFV 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRMEVI L GYT +EKL I Sbjct: 470 ATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNI 501
>LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 774 Score = 221 bits (563), Expect = 7e-58 Identities = 104/153 (67%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC GPPGVGKTSLA SIAK+L RKF+RISLGGV+DE++IRGHRRTY+G+MPGR+I G Sbjct: 348 PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQG 407 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ NPV LLDEIDK SD RGDP+SA+LEVLDPEQN +F+DHY+ FDLSKV+F+ Sbjct: 408 MKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFI 467 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATAN + IP L DRME+I + GYT EKL+I Sbjct: 468 ATANNLATIPGPLRDRMEIINIAGYTEIEKLEI 500
>LON_ECOLI (P0A9M0) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 220 bits (560), Expect = 2e-57 Identities = 109/153 (71%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIAKA RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + +V V NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FV Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFV 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRMEVI L GYT +EKL I Sbjct: 470 ATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNI 501
>LON_ECOL6 (P0A9M1) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 220 bits (560), Expect = 2e-57 Identities = 109/153 (71%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIAKA RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + +V V NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FV Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFV 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRMEVI L GYT +EKL I Sbjct: 470 ATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNI 501
>LON_VIBPA (P74956) ATP-dependent protease La (EC 3.4.21.53)| Length = 783 Score = 220 bits (560), Expect = 2e-57 Identities = 108/153 (70%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIA A RK++R++LGGV+DEA+IRGHRRTYIGS+PG+LI Sbjct: 349 PILCLVGPPGVGKTSLGRSIASATGRKYVRMALGGVRDEAEIRGHRRTYIGSLPGKLIQK 408 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + +V V NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +DLS V+FV Sbjct: 409 MSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYDLSDVMFV 468 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRMEVI L GYT +EKL I Sbjct: 469 ATSNSMN-IPGPLLDRMEVIRLSGYTEDEKLNI 500
>LON_BRUSU (Q8G0I7) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 219 bits (557), Expect = 3e-57 Identities = 106/153 (69%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSLA SIAKA R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ SNP+ LLDEIDK G D RGDP+SA+LEVLDPEQN TF DHYL V +DLS V+FV Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV 480 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN M IP LLDRME+I + GYT +EKL+I Sbjct: 481 TTANTMN-IPGPLLDRMEIIRIAGYTEDEKLEI 512
>LON_BRUAB (P0C113) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 219 bits (557), Expect = 3e-57 Identities = 106/153 (69%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSLA SIAKA R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ SNP+ LLDEIDK G D RGDP+SA+LEVLDPEQN TF DHYL V +DLS V+FV Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV 480 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN M IP LLDRME+I + GYT +EKL+I Sbjct: 481 TTANTMN-IPVPLLDRMEIIRIAGYTEDEKLEI 512
>LON_BRUA2 (Q2YPX3) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 219 bits (557), Expect = 3e-57 Identities = 106/153 (69%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSLA SIAKA R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ SNP+ LLDEIDK G D RGDP+SA+LEVLDPEQN TF DHYL V +DLS V+FV Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV 480 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN M IP LLDRME+I + GYT +EKL+I Sbjct: 481 TTANTMN-IPVPLLDRMEIIRIAGYTEDEKLEI 512
>LON_HAEIN (P43864) ATP-dependent protease La (EC 3.4.21.53)| Length = 803 Score = 218 bits (556), Expect = 4e-57 Identities = 107/153 (69%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIA A RK++R++LGGV+DEA+IRGHR+TYIG++PG+LI Sbjct: 350 PILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAEIRGHRKTYIGALPGKLIQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + +V V NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV Sbjct: 410 MAKVGVKNPLFLLDEIDKMASDMRGDPASALLEVLDPEQNTTFNDHYLEVDYDLSDVMFV 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRMEVI L GYT +EKL I Sbjct: 470 ATSNSMN-IPGPLLDRMEVIRLSGYTEDEKLNI 501
>LON_CAUCR (P52977) ATP-dependent protease La (EC 3.4.21.53)| Length = 799 Score = 218 bits (556), Expect = 4e-57 Identities = 104/153 (67%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIAKA R+F+R+SLGGV+DEA+IRGHRRTYIGSMPG+++ Sbjct: 346 PILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKVVQS 405 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ +N +LLDEIDK GSD RGDPASALLEVLDP QN TF DHYL V +DLS+V+FV Sbjct: 406 MKKAKTTNAFVLLDEIDKMGSDYRGDPASALLEVLDPSQNSTFGDHYLEVDYDLSQVMFV 465 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + +P LLDRME+I +PGYT +EKL+I Sbjct: 466 TTANSLN-MPQPLLDRMEIIRIPGYTEDEKLEI 497
>LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 218 bits (555), Expect = 6e-57 Identities = 104/153 (67%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSLA SIAKA R++IR++LGGV+DEA+IRGHRRTYIGSMPG+++ Sbjct: 353 PILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRRTYIGSMPGKVVQS 412 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ SNP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHYL V +DLS V+F+ Sbjct: 413 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHYLEVEYDLSNVMFI 472 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IPP L+DRMEVI + GYT +EK +I Sbjct: 473 TTANTLN-IPPPLMDRMEVIRIAGYTEDEKREI 504
>LON_BRUME (Q8YHC6) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 217 bits (553), Expect = 1e-56 Identities = 105/153 (68%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSLA SIAKA R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ SNP+ LLDEIDK G D RGDP+SA+LEVLDP+QN TF DHYL V +DLS V+FV Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPKQNATFMDHYLEVEYDLSNVMFV 480 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN M IP LLDRME+I + GYT +EKL+I Sbjct: 481 TTANTMN-IPGPLLDRMEIIRIAGYTEDEKLEI 512
>LON_BRECH (P36772) ATP-dependent protease La (EC 3.4.21.53)| Length = 779 Score = 216 bits (551), Expect = 2e-56 Identities = 102/153 (66%), Positives = 123/153 (80%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSLA S+A+AL R+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G Sbjct: 349 PILCLVGPPGVGKTSLARSVARALGREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQG 408 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ NPV LLDEIDK SD RGDPASALLEVLDP QN F+DHY+ +DL+ V+F+ Sbjct: 409 MKQAGTINPVFLLDEIDKLASDFRGDPASALLEVLDPNQNDKFSDHYIEETYDLTNVMFI 468 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP LLDRMEVI + GYT EKL I Sbjct: 469 TTANSLDTIPRPLLDRMEVISISGYTELEKLNI 501
>LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53)| Length = 810 Score = 213 bits (543), Expect = 1e-55 Identities = 103/153 (67%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+ VGPPGVGKTSL SIAK+ R F+R+SLGGV+DEA++RGHRRTYIGSMPG++I G Sbjct: 355 PIQSLVGPPGVGKTSLGKSIAKSTGRNFVRMSLGGVRDEAEVRGHRRTYIGSMPGKVIQG 414 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +K+ SNP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+FV Sbjct: 415 MKKAKSSNPLFLLDEIDKLGADWRGDPSSALLEVLDPEQNGTFNDHYLEVDYDLSDVMFV 474 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN M+ +P LLDRME+I + GYT +EK++I Sbjct: 475 CTANTMR-MPQPLLDRMEIIRVAGYTEDEKVEI 506
>LON_BUCAP (Q8K988) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 211 bits (536), Expect = 9e-55 Identities = 102/153 (66%), Positives = 122/153 (79%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC +GPPGVGKTSL SIAK+ RK++R++LGG++DEA+IRGHRRTYIGSMPG+L+ Sbjct: 350 PILCLIGPPGVGKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIGSMPGKLMQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + + V NP+ LLDEIDK D+R DPASALLEVLDPEQN FNDHYL V +DLS V+FV Sbjct: 410 MVKAKVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFV 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRME+I L GYT EKL I Sbjct: 470 ATSNSMN-IPAPLLDRMEIIRLSGYTENEKLNI 501
>LON_BUCAI (P57549) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 211 bits (536), Expect = 9e-55 Identities = 102/153 (66%), Positives = 122/153 (79%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC +GPPGVGKTSL SIA++ RK++RI+LGG++DEA+IRGHRRTYIGSMPG+LI Sbjct: 350 PILCLIGPPGVGKTSLGKSIARSTGRKYVRIALGGIRDEAEIRGHRRTYIGSMPGKLIQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + + V NP+ LLDEIDK D+R DPASALLEVLD EQN FNDHYL V +DLS V+FV Sbjct: 410 MAKAKVKNPLFLLDEIDKMSRDIRVDPASALLEVLDSEQNMNFNDHYLEVDYDLSDVMFV 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N M IP LLDRME+I L GYT +EKL I Sbjct: 470 ATSNSMN-IPAPLLDRMEIIRLSGYTEDEKLNI 501
>LON_AQUAE (O66605) ATP-dependent protease La (EC 3.4.21.53)| Length = 795 Score = 210 bits (535), Expect = 1e-54 Identities = 99/152 (65%), Positives = 122/152 (80%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 +L FVGPPGVGKTSL SIA+AL RKF+RI+LGG++DEA+IRGHRRTY+G+MPGR+I + Sbjct: 365 ILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIRDEAEIRGHRRTYVGAMPGRIIQAI 424 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K+ NPV++LDEIDK +GDPA+ALLEVLDPEQNK F D Y+ +PFDLS+V+F+ Sbjct: 425 KQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEVIFIC 484 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 T NR IP LLDRME+I L GY+ EEKL I Sbjct: 485 TGNRADTIPTPLLDRMELIMLSGYSEEEKLFI 516
>LON_BUCBP (Q89A99) ATP-dependent protease La (EC 3.4.21.53)| Length = 780 Score = 210 bits (534), Expect = 2e-54 Identities = 102/153 (66%), Positives = 122/153 (79%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPGVGKTSL SIA+A RK+IR++LGG++DEA+IRGHRRTYIGSMPG++I Sbjct: 350 PILCLVGPPGVGKTSLGQSIARATGRKYIRMALGGIRDEAEIRGHRRTYIGSMPGKIIQK 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + +V V NP+ LLDEIDK D+R DPASALLEVLDPEQN FNDHYL V +DLS V+F+ Sbjct: 410 MAKVGVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNVAFNDHYLEVDYDLSNVMFI 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 AT+N IP LLDRME+I + GYT EKL I Sbjct: 470 ATSNSTN-IPAPLLDRMEIIRISGYTEFEKLNI 501
>LON_RICPR (Q9ZD92) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 209 bits (533), Expect = 2e-54 Identities = 102/153 (66%), Positives = 122/153 (79%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC +GPPGVGKTSL SIA+ + RK+ + SLGGV+DEA+IRGHR+TY+GSMPG+++ Sbjct: 350 PILCLIGPPGVGKTSLVKSIAEGMGRKYTKFSLGGVRDEAEIRGHRKTYLGSMPGKILGQ 409 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 LK++ SNPVMLLDEIDK SD RGDPASALLEVLDPEQN F DHYL V +DLS VVF+ Sbjct: 410 LKKIKTSNPVMLLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVVFI 469 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATAN +P AL DRME I + GY EEKL+I Sbjct: 470 ATAN-SHDLPRALSDRMEKIYISGYVEEEKLQI 501
>LON_CHLMU (Q9PK50) ATP-dependent protease La (EC 3.4.21.53)| Length = 819 Score = 208 bits (530), Expect = 5e-54 Identities = 98/152 (64%), Positives = 123/152 (80%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C VGPPGVGKTS+ SIAK L+RKF R S+GG++DEA+I+GHRRTYIG+MPG+L+ L Sbjct: 387 IICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKLVQAL 446 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K+ ++ NPV+++DE+DK GS GDPASALLEVLDPEQNK F DHYL+V DLS V+F+ Sbjct: 447 KQSAIMNPVIMIDEVDKIGSSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFIL 506 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP LLDRMEV+ L GY EEKL+I Sbjct: 507 TANVLDSIPDPLLDRMEVLRLSGYILEEKLQI 538
>LON_CHLTR (O84348) ATP-dependent protease La (EC 3.4.21.53)| Length = 819 Score = 208 bits (529), Expect = 6e-54 Identities = 98/152 (64%), Positives = 122/152 (80%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C VGPPGVGKTS+ SIAK L+RKF R S+GG++DEA+I+GHRRTYIG+MPG+L+ L Sbjct: 387 IICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKLVQAL 446 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K+ + NPV+++DE+DK GS GDPASALLEVLDPEQNK F DHYL+V DLS V+F+ Sbjct: 447 KQSQIMNPVIMIDEVDKIGSSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFIL 506 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP LLDRMEV+ L GY EEKL+I Sbjct: 507 TANVLDSIPDPLLDRMEVLRLSGYILEEKLQI 538
>LON_MYCSM (O31147) ATP-dependent protease La (EC 3.4.21.53)| Length = 779 Score = 208 bits (529), Expect = 6e-54 Identities = 97/152 (63%), Positives = 124/152 (81%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 V+ GPPGVGKTSL S+A+AL+RKF+R++LGGV+DEA+IRGHRRTY+G++PGR++ + Sbjct: 347 VMVLAGPPGVGKTSLGESVARALDRKFVRVALGGVRDEAEIRGHRRTYVGALPGRIVRAI 406 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 NPV+LLDEIDK GSD RGDPA+ALLEVLDP QN TF DHYL++ DLS VVF+ Sbjct: 407 GEAGSMNPVVLLDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLV 466 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN ++ IP ALLDRME++E+ GYT ++KL I Sbjct: 467 TANVIENIPSALLDRMELVEIDGYTADDKLAI 498
>LONM_YEAST (P36775) Lon protease homolog, mitochondrial precursor (EC 3.4.21.-)| Length = 1133 Score = 207 bits (526), Expect = 1e-53 Identities = 97/153 (63%), Positives = 125/153 (81%), Gaps = 1/153 (0%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++CFVGPPGVGKTS+ SIA+ALNRKF R S+GG+ D A+I+GHRRTYIG++PGR++ L Sbjct: 627 IICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVAEIKGHRRTYIGALPGRVVQAL 686 Query: 184 KRVSVSNPVMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 K+ NP++L+DEIDK G + GDP++ALLEVLDPEQN +F D+YL++P DLSKV+FV Sbjct: 687 KKCQTQNPLILIDEIDKIGHGGIHGDPSAALLEVLDPEQNNSFLDNYLDIPIDLSKVLFV 746 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN ++ IP LLDRMEVIEL GY E+K+KI Sbjct: 747 CTANSLETIPRPLLDRMEVIELTGYVAEDKVKI 779
>LON_CHLPN (Q9Z9F4) ATP-dependent protease La (EC 3.4.21.53)| Length = 819 Score = 204 bits (520), Expect = 7e-53 Identities = 95/152 (62%), Positives = 121/152 (79%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C VGPPGVGKTS+ SIAK L+RKF R S+GG++DEA+I+GHRRTYIG+MPG+++ L Sbjct: 388 IICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKMVQAL 447 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K+ NPV+++DE+DK G+ GDPASALLEVLDPEQNK F DHYL+V DLS V+F+ Sbjct: 448 KQSQAMNPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFIL 507 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP LLDRME++ L GY EEKL+I Sbjct: 508 TANVLDTIPDPLLDRMEILRLSGYILEEKLQI 539
>LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)| Length = 795 Score = 204 bits (519), Expect = 9e-53 Identities = 96/153 (62%), Positives = 126/153 (82%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P++C VGPPGVGK+SLA SIA+AL++KF++ISLGGV DE++IRGHR+TY+GSMPGR++ G Sbjct: 373 PIMCLVGPPGVGKSSLAKSIAEALDKKFVKISLGGVHDESEIRGHRKTYLGSMPGRILKG 432 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + R V NP+ LLDEIDK S +G P+ ALLEVLDPE N F+D+Y+ +DLSKV+F+ Sbjct: 433 MTRAKVINPLFLLDEIDKMTSSNQGYPSGALLEVLDPELNNKFSDNYVEEDYDLSKVMFI 492 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATAN ++ IP ALLDRME+IEL YT +EK++I Sbjct: 493 ATANYIEDIPEALLDRMEIIELTSYTEQEKIEI 525
>LON_MYCPN (P78025) ATP-dependent protease La (EC 3.4.21.53)| Length = 795 Score = 204 bits (518), Expect = 1e-52 Identities = 98/153 (64%), Positives = 125/153 (81%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P++C VGPPGVGK+SLA SIA+ALN+ F+++SLGGV DE++IRGHR+TY+GSMPGR++ G Sbjct: 373 PIMCLVGPPGVGKSSLAKSIAEALNKCFVKVSLGGVHDESEIRGHRKTYLGSMPGRILKG 432 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + R V NP+ LLDEIDK S +G P+ ALLEVLDPE N F+D+Y+ +DLSKV+FV Sbjct: 433 MVRAKVINPLFLLDEIDKMTSSNQGYPSGALLEVLDPELNNKFSDNYVEEDYDLSKVMFV 492 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 ATAN ++ IP ALLDRMEVIEL YT +EKL+I Sbjct: 493 ATANYIEDIPEALLDRMEVIELTSYTEQEKLQI 525
>LON2_BORBU (O51558) ATP-dependent protease La homolog (EC 3.4.21.-)| Length = 813 Score = 203 bits (516), Expect = 2e-52 Identities = 96/153 (62%), Positives = 123/153 (80%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 P+LC VGPPG+GKTSL SIA++L+R+F++ISLGG++DEA+IRGHRRTY+GS+PG I Sbjct: 363 PILCLVGPPGIGKTSLVESIARSLSREFVKISLGGLRDEAEIRGHRRTYVGSLPGVFISA 422 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 +KR SNPV+LLDEIDK S +G+P SALLEVLDPEQN F DHYL +P+DLS V+FV Sbjct: 423 MKRSGKSNPVILLDEIDKINSSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFV 482 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + + LLDRME+I++ GY+ EKL+I Sbjct: 483 TTANSLNGMSKPLLDRMEIIKVEGYSYIEKLEI 515
>LON_HELPY (P55995) ATP-dependent protease La (EC 3.4.21.53)| Length = 835 Score = 202 bits (514), Expect = 3e-52 Identities = 97/152 (63%), Positives = 115/152 (75%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 +LCF GPPGVGKTSLA SIAKA+ R +RI+LGG++D ++RGHRRTYIGSMPGR++ GL Sbjct: 362 ILCFYGPPGVGKTSLANSIAKAIERPLVRIALGGLEDVNELRGHRRTYIGSMPGRIVQGL 421 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 NPVM+LDEIDK VRGDPASALLE+LDPEQN F DHY N DLS+V+F+A Sbjct: 422 IEAKKMNPVMVLDEIDKVDRSVRGDPASALLEILDPEQNTAFRDHYANFSIDLSQVIFIA 481 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP L DRME I + YTP EK +I Sbjct: 482 TANNIDRIPAPLRDRMEFISVSSYTPNEKEEI 513
>LON_HELPJ (Q9ZJL3) ATP-dependent protease La (EC 3.4.21.53)| Length = 831 Score = 201 bits (512), Expect = 6e-52 Identities = 97/152 (63%), Positives = 115/152 (75%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 +LCF GPPGVGKTSLA SIAKA+ R +RI+LGG++D ++RGHRRTYIGSMPGR++ GL Sbjct: 362 ILCFYGPPGVGKTSLANSIAKAIERPLVRIALGGLEDVNELRGHRRTYIGSMPGRIVQGL 421 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 NPVM+LDEIDK VRGDPASALLE+LDPEQN F DHY N DLS+V+F+A Sbjct: 422 IEAKKMNPVMVLDEIDKVDRSVRGDPASALLEILDPEQNIAFRDHYANFSIDLSQVIFIA 481 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP L DRME I + YTP EK +I Sbjct: 482 TANNIDRIPAPLRDRMEFISVSSYTPSEKEEI 513
>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) Length = 1067 Score = 201 bits (511), Expect = 7e-52 Identities = 93/152 (61%), Positives = 119/152 (78%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C VGPPGVGKTS+ SIA ALNR+F R S+GG+ D A+I+GHRRTYIG+MPG+++ L Sbjct: 573 IMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKIVQAL 632 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K+V NP++L+DEIDK G +GDPASALLE+LD EQN F D+Y+++P D+S V+FV Sbjct: 633 KKVQTENPLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLDVSSVLFVC 692 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IPP LLDRMEVIEL GY EK+ I Sbjct: 693 TANTIDTIPPPLLDRMEVIELSGYVSAEKVNI 724
>LON_TREPA (O83536) ATP-dependent protease La (EC 3.4.21.53)| Length = 881 Score = 201 bits (511), Expect = 7e-52 Identities = 93/152 (61%), Positives = 118/152 (77%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++ VGPPGVGKTS+ SIA+A+++ F R S+GG+ DEA+I+GHRRTYIG++PG+++ GL Sbjct: 435 IILLVGPPGVGKTSVGKSIARAIHKPFFRFSVGGISDEAEIKGHRRTYIGALPGKVLQGL 494 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K V PV ++DE+DK GS RGDPA ALLEVLDPEQN TF DHYL++PFDLS +VFV Sbjct: 495 KIVKTKAPVFMIDEVDKIGSGARGDPAGALLEVLDPEQNTTFRDHYLDLPFDLSHIVFVL 554 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN PIP LLDR E+I L GY EK++I Sbjct: 555 TANSTDPIPRPLLDRAEIIRLSGYIDTEKVEI 586
>LONM_HUMAN (P36776) Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) (Lon protease-like protein) (LONP) (LONHs) Length = 959 Score = 198 bits (504), Expect = 5e-51 Identities = 92/152 (60%), Positives = 119/152 (78%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 +LCF GPPGVGKTS+A SIA+ALNR++ R S+GG+ D A+I+GHRRTY+G+MPG++I L Sbjct: 518 ILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCL 577 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K+ NP++L+DE+DK G +GDP+SALLE+LDPEQN F DHYL+VP DLSKV+F+ Sbjct: 578 KKTKTENPLILIDEVDKIGRGYQGDPSSALLELLDPEQNANFLDHYLDVPVDLSKVLFIC 637 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN IP L DRME+I + GY +EKL I Sbjct: 638 TANVTDTIPEPLRDRMEMINVSGYVAQEKLAI 669
>LONH2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precursor (EC| 3.4.21.-) Length = 964 Score = 198 bits (503), Expect = 6e-51 Identities = 93/152 (61%), Positives = 120/152 (78%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C GPPGVGKTS+ SIA+ALNR+F R S+GG+ D A+I+GHRRTY+G+MPG+++ L Sbjct: 450 IICLSGPPGVGKTSIGRSIARALNRQFYRFSVGGLADVAEIKGHRRTYVGAMPGKMVQCL 509 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K V +NP++L+DEIDK G GDPASALLE+LDPEQN F DHYL+VP DLSKV+FV Sbjct: 510 KSVGTANPLVLIDEIDKLGKGHSGDPASALLELLDPEQNVNFLDHYLDVPIDLSKVLFVC 569 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN ++ IP LLDRME+I + GY +EK+ I Sbjct: 570 TANVIEMIPNPLLDRMEIIAIAGYITDEKMHI 601
>LONM_CAEEL (O44952) Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) Length = 971 Score = 197 bits (502), Expect = 8e-51 Identities = 92/153 (60%), Positives = 123/153 (80%), Gaps = 1/153 (0%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 +LCF GPPGVGKTS+A SIA ALNR++ R S+GG+ D A+I+GHRRTY+G+MPG++I + Sbjct: 507 ILCFHGPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKMIQCM 566 Query: 184 KRVSVSNPVMLLDEIDKT-GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 K+V NP++L+DE+DK G+ GDPASALLE+LDPEQN FNDH+L+VP DLS+V+F+ Sbjct: 567 KKVKTENPLVLIDEVDKIGGAGFHGDPASALLELLDPEQNANFNDHFLDVPVDLSRVLFI 626 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP L DRME+I++ GY EEK++I Sbjct: 627 CTANEISKIPGPLRDRMEMIDVSGYLAEEKVEI 659
>LONH2_ARATH (P93655) Lon protease homolog 2, mitochondrial precursor (EC| 3.4.21.-) Length = 940 Score = 196 bits (499), Expect = 2e-50 Identities = 94/152 (61%), Positives = 118/152 (77%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C GPPGVGKTS+ SIA+ALNRKF R S+GG+ D A+I+GHRRTY+G+MPG+++ L Sbjct: 459 IICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYVGAMPGKMVQCL 518 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K V +NP++L+DEIDK G GDPASALLE+LDPEQN F DHYL+V DLSKV+FV Sbjct: 519 KSVGTANPLVLIDEIDKLGRGHAGDPASALLELLDPEQNANFLDHYLDVTIDLSKVLFVC 578 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP LLDRMEVI + GY +EK+ I Sbjct: 579 TANVIDMIPNPLLDRMEVISIAGYITDEKVHI 610
>LON_CAMJE (O69300) ATP-dependent protease La (EC 3.4.21.53)| Length = 791 Score = 193 bits (491), Expect = 2e-49 Identities = 93/152 (61%), Positives = 113/152 (74%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 +LC GPPGVGKTSLA S++KAL R+ IRI+LGG++D ++RGHRRTYIG+MPGR+ GL Sbjct: 359 ILCLYGPPGVGKTSLANSVSKALKRELIRIALGGLEDVNELRGHRRTYIGAMPGRITQGL 418 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 NPV++LDEIDK RGDP++ LLE+LDPEQN F D+YLN DLSKV+F+A Sbjct: 419 IEAKQINPVIVLDEIDKLNRSFRGDPSAVLLEILDPEQNSKFRDYYLNFNIDLSKVIFIA 478 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN + IP L DRME IEL YTP EK I Sbjct: 479 TANDISNIPAPLRDRMEFIELSSYTPSEKFHI 510
>LONH3_ARATH (Q9M9L8) Putative Lon protease homolog 3, mitochondrial precursor| (EC 3.4.21.-) Length = 924 Score = 192 bits (488), Expect = 3e-49 Identities = 92/152 (60%), Positives = 118/152 (77%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C GPPGVGKTS+ SIA+AL+RKF R S+GG+ D A+I+GH +TY+G+MPG+++ L Sbjct: 442 IICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMVQCL 501 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 K V +NP++L DEIDK G GDPASALLEV+DPEQN F DH+LNV DLSKV+FV Sbjct: 502 KSVGTANPLILFDEIDKLGRCHTGDPASALLEVMDPEQNAKFLDHFLNVTIDLSKVLFVC 561 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN ++ IP LLDRMEVI+L GY +EK+ I Sbjct: 562 TANVIEMIPGPLLDRMEVIDLSGYVTDEKMHI 593
>LONH4_ARATH (Q9M9L7) Putative Lon protease homolog 4, mitochondrial precursor| (EC 3.4.21.-) Length = 942 Score = 191 bits (484), Expect = 1e-48 Identities = 94/153 (61%), Positives = 116/153 (75%), Gaps = 1/153 (0%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++C GP GVGKTS+ SIA+AL+RKF R S+GG+ D A+I+GHRRTYIG+MPG+++ L Sbjct: 451 IICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGKMVQCL 510 Query: 184 KRVSVSNPVMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 K V NP++L+DEIDK G GDPASA+LE+LDPEQN F DHYL+VP DLSKV+FV Sbjct: 511 KNVGTENPLVLIDEIDKLGVRGHHGDPASAMLELLDPEQNANFLDHYLDVPIDLSKVLFV 570 Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN IP LLDRMEVI L GY +EK+ I Sbjct: 571 CTANVTDTIPGPLLDRMEVITLSGYITDEKMHI 603
>LON1_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 188 bits (477), Expect = 6e-48 Identities = 84/152 (55%), Positives = 116/152 (76%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 ++ VGPPGVGKTS+ +IAK L KF R S+GG++DE++I+GHRRTY+G++PG++I GL Sbjct: 384 IILLVGPPGVGKTSIGAAIAKVLRTKFFRFSVGGMRDESEIKGHRRTYVGALPGKIIQGL 443 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363 + ++PV L+DE+DK + GDP S LLEVLDPEQN F DHYL++PFD+S V F+ Sbjct: 444 RITKTNSPVFLIDEVDKISASSYGDPFSVLLEVLDPEQNVRFRDHYLDLPFDISNVFFIL 503 Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 TAN ++ IP LL+RME+IE+ GY EK++I Sbjct: 504 TANSVETIPRPLLNRMEIIEISGYIDNEKIEI 535
>LONH_MIMIV (Q5UPT0) Lon protease homolog (EC 3.4.21.-)| Length = 1023 Score = 100 bits (249), Expect = 2e-21 Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 3/155 (1%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 V+ VGPPGVGKT LA I+ AL + LGG+ D AD+ GH TY G+ G ++ + Sbjct: 510 VIGLVGPPGVGKTLLAKGISAALGIPLSIVGLGGMSDSADLIGHSFTYAGAQYGMIVRQM 569 Query: 184 KRVSVSNPVMLLDEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLN--VPFDLSKVV 354 + VM DE+DK + + + L+ + DP N+ F D + + + FDLS V+ Sbjct: 570 IKAGNWRSVMFFDEVDKVSKRNDTNEIYNTLIHITDPNMNQNFQDRFYSSAIDFDLSGVL 629 Query: 355 FVATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459 V + N + + P LLDR++ I++ Y+ +EK+ I Sbjct: 630 IVFSYNSSEKLDPILLDRIKEIKISPYSLKEKILI 664
>CLPB_MYCPE (Q8EW28) Chaperone clpB| Length = 705 Score = 47.0 bits (110), Expect = 2e-05 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 FVGP GVGKT +A S+A+ L + +RI++ ++ I G YIG G L Sbjct: 457 FVGPTGVGKTEVAKSLAENLFNTEKAIVRINMSEYMEKHSISRLIGAPPGYIGYEQAGEL 516 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDEI+K D+ + LL+VLD K +N Sbjct: 517 SEQIRRKPYS--VVLLDEIEKAHPDI----LNVLLQVLDEGTLKDNQGRNIN----FKNT 566 Query: 352 VFVATAN 372 + + T+N Sbjct: 567 IIIMTSN 573
>CLPB_STAES (Q8CPT5) Chaperone clpB| Length = 869 Score = 46.6 bits (109), Expect = 3e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G Y+G G+L Sbjct: 607 FLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K SDV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHSDV----FNVLLQILD 699 Score = 29.3 bits (64), Expect = 5.0 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + RK + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S ++ +DEI Sbjct: 259 KAVLKEVKESEGRIILFIDEI 279
>CLPB_STAEQ (Q5HQI5) Chaperone clpB| Length = 869 Score = 46.6 bits (109), Expect = 3e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G Y+G G+L Sbjct: 607 FLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K SDV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHSDV----FNVLLQILD 699 Score = 29.3 bits (64), Expect = 5.0 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + RK + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S ++ +DEI Sbjct: 259 KAVLKEVKESEGRIILFIDEI 279
>CLPA_ECOLI (P0ABH9) ATP-dependent Clp protease ATP-binding subunit clpA| Length = 758 Score = 46.2 bits (108), Expect = 4e-05 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLIDG 180 F GP GVGKT + ++KAL + +R + + + G Y+G G L D Sbjct: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + + + V+LLDEI+K DV + LL+V+D N T D+ D VV V Sbjct: 553 V--IKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADFRNVVLV 602 Query: 361 ATAN 372 T N Sbjct: 603 MTTN 606
>CLPA_ECOL6 (P0ABI0) ATP-dependent Clp protease ATP-binding subunit clpA| Length = 758 Score = 46.2 bits (108), Expect = 4e-05 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLIDG 180 F GP GVGKT + ++KAL + +R + + + G Y+G G L D Sbjct: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + + + V+LLDEI+K DV + LL+V+D N T D+ D VV V Sbjct: 553 V--IKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADFRNVVLV 602 Query: 361 ATAN 372 T N Sbjct: 603 MTTN 606
>CLPA_ECO57 (P0ABI1) ATP-dependent Clp protease ATP-binding subunit clpA| Length = 758 Score = 46.2 bits (108), Expect = 4e-05 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLIDG 180 F GP GVGKT + ++KAL + +R + + + G Y+G G L D Sbjct: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + + + V+LLDEI+K DV + LL+V+D N T D+ D VV V Sbjct: 553 V--IKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADFRNVVLV 602 Query: 361 ATAN 372 T N Sbjct: 603 MTTN 606
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 45.8 bits (107), Expect = 5e-05 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 10/159 (6%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 F GPPG GKT +A ++A N FI + + E ++G + + +R Sbjct: 159 FYGPPGTGKTLMARALATETNSSFILVKAPELIGE---------HVGDASKMIRELYQRA 209 Query: 193 SVSNP-VMLLDEIDKTG-----SDVRGDPA---SALLEVLDPEQNKTFNDHYLNVPFDLS 345 S S P ++ +DE+D G +RGD + +ALL LD + Sbjct: 210 SESAPCIVFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKEN-------------E 256 Query: 346 KVVFVATANRMQPIPPALLDRM-EVIELPGYTPEEKLKI 459 VV +A N + PA+ R E IE EE+LKI Sbjct: 257 GVVTIAATNNPAMLDPAIRSRFEEEIEFKLPNDEERLKI 295
>CLPB2_SYNY3 (P74361) Chaperone clpB 2| Length = 872 Score = 45.8 bits (107), Expect = 5e-05 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++AK L +RI + ++ + + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DEI+K GD + +L++LD + H + D Sbjct: 669 TEAIRRRPYS--VILFDEIEK----AHGDVFNVMLQILDDGRLTDAQGHVV----DFKNT 718 Query: 352 VFVATAN 372 + + T+N Sbjct: 719 IIIMTSN 725 Score = 32.0 bits (71), Expect = 0.78 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + +RK I + +G + I G + Y Sbjct: 204 PVL--IGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMGAL-----IAGAK--YR 254 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228 G RL LK V+ S ++ +DEI Sbjct: 255 GEFEERLKAVLKEVTDSQGQIILFIDEI 282
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 45.4 bits (106), Expect = 7e-05 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 8/157 (5%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 + VGPPG GKT LA +IA F IS + ++G R+ D + Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 238 Query: 187 RVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357 S P ++ +DEID G RG A L E+ +T N + + FD ++ ++ Sbjct: 239 HSRKSAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFDGNEGIIL 293 Query: 358 VATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 +A NR + PALL DR ++ LP E++ Sbjct: 294 IAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQI 330
>CLPB_STAAW (Q8NXE7) Chaperone clpB| Length = 869 Score = 45.4 bits (106), Expect = 7e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G YIG G+L Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + +K + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S+ ++ +DEI Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279
>CLPB_STAAS (Q6GAV1) Chaperone clpB| Length = 869 Score = 45.4 bits (106), Expect = 7e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G YIG G+L Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + +K + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S+ ++ +DEI Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279
>CLPB_STAAR (Q6GIB2) Chaperone clpB| Length = 869 Score = 45.4 bits (106), Expect = 7e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G YIG G+L Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + +K + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S+ ++ +DEI Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279
>CLPB_STAAN (Q7A6G6) Chaperone clpB| Length = 869 Score = 45.4 bits (106), Expect = 7e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G YIG G+L Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + +K + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S+ ++ +DEI Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279
>CLPB_STAAM (Q99VB5) Chaperone clpB| Length = 869 Score = 45.4 bits (106), Expect = 7e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G YIG G+L Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + +K + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S+ ++ +DEI Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279
>CLPB_STAAC (Q5HHB0) Chaperone clpB| Length = 869 Score = 45.4 bits (106), Expect = 7e-05 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA S+A +L + IRI + ++ + + G YIG G+L Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL++LD Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ +A+ + +K + S L E D+ Y G RL Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK V S+ ++ +DEI Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 45.4 bits (106), Expect = 7e-05 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 8/149 (5%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 + VGPPG GKT LA +IA F IS + ++G R+ D + Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 238 Query: 187 RVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357 S P ++ +DEID G RG A L E+ +T N + + FD ++ V+ Sbjct: 239 HARKSAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFDGNEGVIL 293 Query: 358 VATANRMQPIPPALL-----DRMEVIELP 429 +A NR + PALL DR ++ LP Sbjct: 294 IAATNRPDVLDPALLRPGRFDRQVIVALP 322
>CLPB_MYCTU (P63288) Chaperone clpB| Length = 848 Score = 45.1 bits (105), Expect = 9e-05 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R +RI + G A + G Y+G G+L Sbjct: 605 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R + V+L DEI+K DV LL+VLD + + + H V D Sbjct: 665 TEAVRRRPYT--VVLFDEIEKAHPDV----FDVLLQVLD--EGRLTDGHGRTV--DFRNT 714 Query: 352 VFVATANR-------------MQPIPPALLDRM-EVIELPGYTPEEKLKI 459 + + T+N P ++R+ +V+ G PEE ++I Sbjct: 715 ILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRI 764
>CLPB_MYCBO (P63287) Chaperone clpB| Length = 848 Score = 45.1 bits (105), Expect = 9e-05 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R +RI + G A + G Y+G G+L Sbjct: 605 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R + V+L DEI+K DV LL+VLD + + + H V D Sbjct: 665 TEAVRRRPYT--VVLFDEIEKAHPDV----FDVLLQVLD--EGRLTDGHGRTV--DFRNT 714 Query: 352 VFVATANR-------------MQPIPPALLDRM-EVIELPGYTPEEKLKI 459 + + T+N P ++R+ +V+ G PEE ++I Sbjct: 715 ILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRI 764
>CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2| Length = 900 Score = 44.3 bits (103), Expect = 2e-04 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 7/132 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKD---EADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A +L +R+ + + A + G Y+G G+L Sbjct: 639 FLGPTGVGKTELAKALATSLFDEEEALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQL 698 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R + V+LLDE++K DV + LL+VLD + + L V D Sbjct: 699 TEAVRRRPYA--VLLLDEVEKAHPDV----FNLLLQVLD--DGRLTDSQGLTV--DFRHT 748 Query: 352 VFVATANRMQPI 387 V V T+N P+ Sbjct: 749 VVVMTSNLASPV 760 Score = 32.0 bits (71), Expect = 0.78 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + + I + LG + A RG + Sbjct: 240 PVL--IGEPGVGKTAIAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERL 297 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLE 279 S +++ + R S S V+ +DE+ GSD A +LL+ Sbjct: 298 RS----VLEEVSR-SDSGVVLFIDELHTVVGSDRSSTDAGSLLK 336
>CLPB_MYCLE (Q9CB26) Chaperone clpB| Length = 848 Score = 44.3 bits (103), Expect = 2e-04 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R +R+ + G A + G YIG G+L Sbjct: 605 FLGPTGVGKTELAKALADFLFDDQRAMVRVDMSEYGEKHSVARLVGAPPGYIGHDQGGQL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD-----PEQNKTFNDHYLNVPF 336 + ++R + V+L DE++K SDV LL+VLD Q +T D +P Sbjct: 665 TEAVRRRPYT--VVLFDEVEKAHSDV----FDVLLQVLDEGRLTDGQGRTV-DFRNTIPI 717 Query: 337 DLSKVVFVATANRMQP-----IPPALLDRM-EVIELPGYTPEEKLKI 459 S + + ++ P ++R+ +V+ G PEE ++I Sbjct: 718 LTSNLGSGGSEEQVMAAVRSVFKPEFINRLDDVLIFDGLNPEELVRI 764
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 44.3 bits (103), Expect = 2e-04 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 8/145 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A L+ F+++ + D+ YIG + + Sbjct: 191 GPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK---------YIGESARMIREMFNYARD 241 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFND--HYLNVPFDLSKVVFVATA 369 P ++ +DEID G + SA D E +T + + L+ L KV + Sbjct: 242 HQPCIVFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQLDGFDSLGKVKVIMAT 296 Query: 370 NRMQPIPPAL-----LDRMEVIELP 429 NR + PAL LDR I LP Sbjct: 297 NRPDTLDPALLRPGRLDRKIEIGLP 321
>CLPA_RHOBL (P05444) ClpA homolog protein| Length = 793 Score = 44.3 bits (103), Expect = 2e-04 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRLIDG 180 F GP GVGKT +A +A L + +R + ++ + + G Y+G G L DG Sbjct: 523 FTGPTGVGKTEVAKQLAATLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDG 582 Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 + + + V+LLDEI+K DV + LL+V+D + N + D V+ + Sbjct: 583 VDQ--HPHCVLLLDEIEKAHPDV----YNILLQVMDHGKLTDHNGRAV----DFRNVILI 632 Query: 361 ATAN 372 T+N Sbjct: 633 MTSN 636
>CLPB_PSESM (Q889C2) Chaperone clpB| Length = 854 Score = 43.9 bits (102), Expect = 2e-04 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A+ L +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDE++K SDV + LL+VL E + + H V D Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHSDV----FNILLQVL--EDGRLTDSHGRTV--DFRNT 712 Query: 352 VFVATAN 372 V V T+N Sbjct: 713 VIVMTSN 719
>CLPB_PROMA (Q7VBL0) Chaperone clpB| Length = 864 Score = 43.9 bits (102), Expect = 2e-04 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLI 174 +GP GVGKT L+ S+AK L + IRI + ++ I G Y+G G+L Sbjct: 611 LGPTGVGKTELSKSLAKELFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLS 670 Query: 175 DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DE++K SDV + +L++LD Sbjct: 671 EAVRRNPYS--VILFDEVEKANSDV----LNIMLQILD 702 Score = 31.6 bits (70), Expect = 1.0 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + NR+ I + +G + I G + Y Sbjct: 203 PVL--IGEPGVGKTAIVEGLAQRIINGDVPSALQNRQLIALDMGAL-----IAGAK--YR 253 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228 G RL LK V+ S V+ +DEI Sbjct: 254 GEFEERLKAVLKEVTSSQGQIVLFIDEI 281
>CLPB_MEIRU (Q7X2S8) Chaperone clpB| Length = 854 Score = 43.5 bits (101), Expect = 3e-04 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A +L +RI + +++ A + G Y+G G+L Sbjct: 593 FLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQL 652 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K DV + LL+VLD Sbjct: 653 TEAVRRRPYS--VILFDEIEKAHPDV----FNVLLQVLD 685
>RUVB_CAUCR (Q9A3G8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 43.5 bits (101), Expect = 3e-04 Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 12/160 (7%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 VL F GPPG+GKT+LA +A+ L F R + G V ++ PG L L Sbjct: 56 VLLF-GPPGLGKTTLAQIVARELGVNF-RATSGPVLNK--------------PGDLAAIL 99 Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-----------NV 330 + +N V+ +DEI + S+V E+L P DH L ++ Sbjct: 100 TNLE-ANDVLFIDEIHRLSSNVE--------EILYP----AMEDHVLDLVIGEGPSARSI 146 Query: 331 PFDLSKVVFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447 DL+ VA R + L DR + I L YTP E Sbjct: 147 RIDLAPFTLVAATTRAGMLATPLRDRFGIPIRLEFYTPAE 186
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 43.5 bits (101), Expect = 3e-04 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A L+ F+++ + D+ YIG + + Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 224 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369 P ++ +DEID G + SA D E +T + + FD L +V + Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDTLHRVKMIMAT 279 Query: 370 NRMQPIPPAL-----LDRMEVIELP 429 NR + PAL LDR I+LP Sbjct: 280 NRPDTLDPALLRPGRLDRKIHIDLP 304
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 43.5 bits (101), Expect = 3e-04 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A L+ F+++ + D+ YIG + + Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 224 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369 P ++ +DEID G + SA D E +T + + FD L +V + Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDTLHRVKMIMAT 279 Query: 370 NRMQPIPPAL-----LDRMEVIELP 429 NR + PAL LDR I+LP Sbjct: 280 NRPDTLDPALLRPGRLDRKIHIDLP 304
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 43.5 bits (101), Expect = 3e-04 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A L+ F+++ + D+ YIG + + Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 224 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369 P ++ +DEID G + SA D E +T + + FD L +V + Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDTLHRVKMIMAT 279 Query: 370 NRMQPIPPAL-----LDRMEVIELP 429 NR + PAL LDR I+LP Sbjct: 280 NRPDTLDPALLRPGRLDRKIHIDLP 304
>CLPB_DESVH (Q72AW6) Chaperone clpB| Length = 865 Score = 43.5 bits (101), Expect = 3e-04 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A+AL +R+ + ++ A + G Y+G G+L Sbjct: 608 FLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLIGAPPGYVGYDEGGQL 667 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DE++K DV + LL++LD + + H V D Sbjct: 668 TEAVRRKPYS--VVLFDEVEKAHPDV----FNTLLQILD--DGRLTDSHGRTV--DFRNT 717 Query: 352 VFVATANRMQP 384 + + T+N P Sbjct: 718 IIIMTSNIGSP 728
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 43.5 bits (101), Expect = 3e-04 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D ++ Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 + P ++ +DEID G RG A L E+ +T N + + F+ ++ ++ +A Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 NR + PALL DR V+ LP E++ Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 43.5 bits (101), Expect = 3e-04 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D ++ Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 + P ++ +DEID G RG A L E+ +T N + + F+ ++ ++ +A Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 NR + PALL DR V+ LP E++ Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 43.5 bits (101), Expect = 3e-04 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D ++ Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 + P ++ +DEID G RG A L E+ +T N + + F+ ++ ++ +A Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 NR + PALL DR V+ LP E++ Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 43.5 bits (101), Expect = 3e-04 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D ++ Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 + P ++ +DEID G RG A L E+ +T N + + F+ ++ ++ +A Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 NR + PALL DR V+ LP E++ Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 43.5 bits (101), Expect = 3e-04 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D ++ Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 + P ++ +DEID G RG A L E+ +T N + + F+ ++ ++ +A Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 NR + PALL DR V+ LP E++ Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330
>CLPB_CORGL (P53532) Chaperone clpB| Length = 852 Score = 43.5 bits (101), Expect = 3e-04 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +R IRI + G A + G Y+G G+L Sbjct: 606 FLGPTGVGKTELAKAVAEFLFDDDRAMIRIDMSEYGEKHSVARLVGAPPGYVGYDQGGQL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DE++K DV LL+VLD Sbjct: 666 TEAVRRRPYT--VVLFDEVEKAHPDV----FDILLQVLD 698
>CLPB2_STRAW (Q826F2) Chaperone clpB 2| Length = 879 Score = 43.5 bits (101), Expect = 3e-04 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +R+ + ++ + + G Y+G G+L Sbjct: 611 FLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQL 670 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K +DV + LL++LD Sbjct: 671 TEAVRRKPYS--VVLFDEIEKAHTDV----FNTLLQILD 703
>CLPB_HELPJ (Q9ZMH1) Chaperone clpB| Length = 856 Score = 43.1 bits (100), Expect = 3e-04 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT A ++A+ L ++ IRI + ++ I G Y+G G+L Sbjct: 603 FLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYEEGGQL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDE++K DV + LL+VLD E + T + V D Sbjct: 663 TEAVRRKPYS--VVLLDEVEKAHPDV----FNLLLQVLD-EGHLTDSK---GVRVDFKNT 712 Query: 352 VFVATAN 372 + + T+N Sbjct: 713 ILILTSN 719
>CLPB_AQUAE (O67588) Chaperone clpB| Length = 1006 Score = 43.1 bits (100), Expect = 3e-04 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L+ ++A+ L IR+ + K+E A + G Y+G G+L Sbjct: 724 FLGPTGVGKTELSKALAELLFGDEDALIRLDMSEFKEEHSVAKLIGAPPGYVGYEEGGKL 783 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDEI+K V L+VLD + + H V D Sbjct: 784 TEAVRRKPYS--VILLDEIEKAHPRV----LDLFLQVLD--DGRLTDSHGRTV--DFRNT 833 Query: 352 VFVATAN 372 V + T+N Sbjct: 834 VIIMTSN 840
>CLPB_YEREN (Q9F746) Chaperone clpB| Length = 890 Score = 43.1 bits (100), Expect = 3e-04 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 7/130 (5%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMP 162 V VGP GVGKT A +IA+++ + I I++ ++ + ++G Y+G Sbjct: 621 VFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSLKGSPPGYVGYGEG 680 Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 G L + ++R S V+LLDEI+K SDV +V D Q + ++ D Sbjct: 681 GVLTEAVRRKPYS--VVLLDEIEKAHSDVH----ELFFQVFDKGQMEDGEGRFI----DF 730 Query: 343 SKVVFVATAN 372 + + T+N Sbjct: 731 KNTILLLTSN 740
>CLPB_BIFLO (Q8G4X4) Chaperone clpB| Length = 889 Score = 43.1 bits (100), Expect = 3e-04 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L + +RI + ++A + G Y+G G+L Sbjct: 614 FLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQL 673 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DE++K ++ LL+VLD Sbjct: 674 TEAVRRRPYS--VVLFDEVEKANPEI----FDVLLQVLD 706
>CLPB_WOLSU (Q7M9X4) Chaperone clpB| Length = 857 Score = 43.1 bits (100), Expect = 3e-04 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT A ++AK L ++ +RI + ++ + + G Y+G G+L Sbjct: 606 FLGPTGVGKTQSAKTLAKFLFDSDKNLVRIDMSEYMEKHAASRLVGAPPGYVGYEEGGQL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DEI+K DV + LL+VLD + T N V D Sbjct: 666 TEAIRRKPYS--VVLFDEIEKAHPDV----FNILLQVLD-DGRLTDNK---GVTVDFRNT 715 Query: 352 VFVATAN 372 + + T+N Sbjct: 716 IIILTSN 722 Score = 28.9 bits (63), Expect = 6.6 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLG-----GVKDEADIRGHRRTYIGSMPG 165 P+L +G PGVGKT++ +A+ + K + +SL + A I G + Y G Sbjct: 202 PIL--LGEPGVGKTAVVEGLAQRIIAKEVPLSLQNKRVVALDMSALIAGAK--YRGEFED 257 Query: 166 RLIDGLKRV-SVSNPVMLLDEI 228 RL ++ V N ++ +DEI Sbjct: 258 RLKKVVEEVKKAGNVILFIDEI 279
>CLPB_MYCPA (Q73T66) Chaperone clpB| Length = 848 Score = 42.7 bits (99), Expect = 4e-04 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R +RI + G A + G YIG G+L Sbjct: 605 FLGPTGVGKTELAKALADFLFDDKRAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQGGQL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DEI+K DV LL+VLD Sbjct: 665 TEAVRRRPYT--VILFDEIEKAHPDV----FDVLLQVLD 697
>CLPB_MYCGA (Q7NAZ3) Chaperone clpB| Length = 717 Score = 42.7 bits (99), Expect = 4e-04 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT +A +A L + +RI + + + G YIG PG L Sbjct: 463 FLGPTGVGKTEVAKKLAYCLFDNEKAMVRIDMSEFMERHSVDKLIGSPPGYIGYDQPGVL 522 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 D ++ + V+L DEI+K DV + LL++LD Q ++ +N Sbjct: 523 SDAIRTKPYA--VVLFDEIEKAHPDV----LNILLQILDDGQLTDNHNRLVN----FKNT 572 Query: 352 VFVATAN 372 + + T+N Sbjct: 573 IIIMTSN 579
>CLPB_MYCGE (P47597) Chaperone clpB| Length = 714 Score = 42.7 bits (99), Expect = 4e-04 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+G GVGKT LA S+A+ L + IR + ++ A + G YIG G L Sbjct: 464 FLGSTGVGKTELAKSLAEVLFDNEKALIRFDMSEYMEKHSVAKLIGAPPGYIGYEQSGLL 523 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K DV + LL+VLD Sbjct: 524 TEAVRRKPYS--VLLFDEIEKAHPDV----TNVLLQVLD 556
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 42.7 bits (99), Expect = 4e-04 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 8/157 (5%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 + VGPPG GKT LA +IA F IS + ++G R+ D + Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 238 Query: 187 RV-SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357 V+ ++ +DEID G RG A L E+ +T N + + FD ++ ++ Sbjct: 239 HSRKVAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFDGNEGIIL 293 Query: 358 VATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 +A NR + PALL DR + LP EK+ Sbjct: 294 IAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKI 330
>CLPB_THET8 (Q9RA63) Chaperone clpB| Length = 854 Score = 42.7 bits (99), Expect = 4e-04 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L IRI + ++ + + G Y+G G+L Sbjct: 593 FLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL 652 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DEI+K DV + LL++LD + + H V D Sbjct: 653 TEAVRRRPYS--VILFDEIEKAHPDV----FNILLQILD--DGRLTDSHGRTV--DFRNT 702 Query: 352 VFVATANRMQPI 387 V + T+N P+ Sbjct: 703 VIILTSNLGSPL 714
>CLPB_THET2 (Q72IK9) Chaperone clpB| Length = 854 Score = 42.7 bits (99), Expect = 4e-04 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L IRI + ++ + + G Y+G G+L Sbjct: 593 FLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL 652 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DEI+K DV + LL++LD + + H V D Sbjct: 653 TEAVRRRPYS--VILFDEIEKAHPDV----FNILLQILD--DGRLTDSHGRTV--DFRNT 702 Query: 352 VFVATANRMQPI 387 V + T+N P+ Sbjct: 703 VIILTSNLGSPL 714
>CLPB_PSEPK (Q88Q71) Chaperone clpB| Length = 854 Score = 42.4 bits (98), Expect = 6e-04 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A+ L +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDE++K DV + LL+VL E + + H V D Sbjct: 663 TEAVRRKPYS--VVLLDEVEKAHPDV----FNVLLQVL--EDGRLTDSHGRTV--DFRNT 712 Query: 352 VFVATAN 372 V V T+N Sbjct: 713 VIVMTSN 719
>CLPB_BACNO (P17422) Chaperone clpB| Length = 860 Score = 42.4 bits (98), Expect = 6e-04 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A+ L +RI + ++ A + G Y+G G L Sbjct: 608 FLGPTGVGKTELCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYL 667 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DE++K SDV + LL+VLD Sbjct: 668 TEAVRRKPYS--VVLFDEVEKAHSDV----FNTLLQVLD 700
>AMIB_PSEAE (Q51416) ATP-dependent protease ATP-binding subunit-like protein| amiB Length = 371 Score = 42.4 bits (98), Expect = 6e-04 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 9/101 (8%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALN---RKFIRISLGGVKDE---ADIRGHRRTYIGSMPGRLI 174 F+GP GVGKT + ++A+AL+ F R+ + + E A + G Y+G+ G + Sbjct: 94 FLGPTGVGKTEIVRALARALHGDAEGFCRVDMNTLSQEHYAAALTGAPPGYVGAKEGTTL 153 Query: 175 ---DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 D L ++L DE++K +V ALL VLD Sbjct: 154 LEQDKLDGSPGRPGIVLFDELEKASPEV----VHALLNVLD 190
>CLPB_HELPY (P71404) Chaperone clpB| Length = 856 Score = 42.4 bits (98), Expect = 6e-04 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT A ++A+ L ++ IRI + ++ + + G Y+G G+L Sbjct: 603 FLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYLEKHAMSRLIGAAPGYVGYEEGGQL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDE++K DV + LL+VLD E + T + V D Sbjct: 663 TEAVRRKPYS--VVLLDEVEKAHPDV----FNLLLQVLD-EGHLTDSK---GVRVDFKNT 712 Query: 352 VFVATAN 372 + + T+N Sbjct: 713 ILILTSN 719
>CLPB_LACLC (O68185) Chaperone clpB| Length = 867 Score = 42.0 bits (97), Expect = 7e-04 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +RI + ++ + G Y+G G+L Sbjct: 606 FLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQL 665 Query: 172 IDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R NP ++LLDEI+K DV + LL+VLD Sbjct: 666 TEAVRR----NPYTIILLDEIEKAHPDV----FNILLQVLD 698
>CLPB_LACLA (Q9CFF3) Chaperone clpB| Length = 867 Score = 42.0 bits (97), Expect = 7e-04 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +RI + ++ + G Y+G G+L Sbjct: 606 FLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQL 665 Query: 172 IDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R NP ++LLDEI+K DV + LL+VLD Sbjct: 666 TEAVRR----NPYTIILLDEIEKAHPDV----FNILLQVLD 698
>CLPB_BACCR (Q81GM5) Chaperone clpB| Length = 866 Score = 42.0 bits (97), Expect = 7e-04 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A++L + IRI + ++ + + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K +V + LL++LD Sbjct: 669 TEAVRRKPYS--VVLLDEIEKAHPEV----FNILLQMLD 701
>CLPB_BACC1 (Q73BY1) Chaperone clpB| Length = 866 Score = 42.0 bits (97), Expect = 7e-04 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A++L + IRI + ++ + + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K +V + LL++LD Sbjct: 669 TEAVRRKPYS--VILLDEIEKAHPEV----FNILLQMLD 701
>CLPB_BACAN (Q81TT4) Chaperone clpB| Length = 866 Score = 42.0 bits (97), Expect = 7e-04 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A++L + IRI + ++ + + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K +V + LL++LD Sbjct: 669 TEAVRRKPYS--VILLDEIEKAHPEV----FNILLQMLD 701
>CLPB_HUMAN (Q9H078) Caseinolytic peptidase B protein homolog (Suppressor of| potassium transport defect 3) Length = 707 Score = 42.0 bits (97), Expect = 7e-04 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK----FIRISLGGVKDEADIRGHRRTYIGSMP--- 162 V F+G G+GKT LA AK +++ FIR+ + ++ ++ +IGS P Sbjct: 376 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV----AKFIGSPPGYV 431 Query: 163 -----GRLIDGLKRVSVSNPVMLLDEIDKTGSDV 249 G+L LK+ N V+L DE+DK DV Sbjct: 432 GHEEGGQLTKKLKQ--CPNAVVLFDEVDKAHPDV 463
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 42.0 bits (97), Expect = 7e-04 Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT +A +IA +N FIR+ V E R YIG RL+ L ++ Sbjct: 178 GPPGCGKTLMAKAIAHEVNATFIRV----VGSEL-----VRKYIGE-GARLVHELFELAK 227 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366 ++ +DEID G+ + EV N+T + FD V +A Sbjct: 228 EKAPTIIFIDEIDAIGAKRLDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 282 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKLKI 459 NR + PALL DR+ + LP + E +L+I Sbjct: 283 TNRPDILDPALLRPGRFDRLIEVPLPDF--EGRLEI 316
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 42.0 bits (97), Expect = 7e-04 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 16/154 (10%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D K+ Sbjct: 212 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 262 Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 ++P ++ +DEID G+D R + LL +D + T Sbjct: 263 ENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT------------ 310 Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELP 429 ++ +A NR+ + ALL DR +++P Sbjct: 311 -GIIIIAATNRVDVLDAALLRPGRFDRQVTVDVP 343
>CLPB_PSEAE (Q9HVN5) Chaperone clpB| Length = 854 Score = 42.0 bits (97), Expect = 7e-04 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A+ L +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDE++K DV + LL+VL E + + H V D Sbjct: 663 TEAIRRKPYS--VVLLDEVEKAHPDV----FNILLQVL--EDGRLTDSHGRTV--DFRNT 712 Query: 352 VFVATAN 372 V V T+N Sbjct: 713 VVVMTSN 719
>RFCL_SULAC (Q4JAB1) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 437 Score = 42.0 bits (97), Expect = 7e-04 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR--GHRRTYIGSMPGRLIDGLKRV 192 GPPGVGKT+LA ++A+ + + ++ ++ DI+ R + GS+ G Sbjct: 48 GPPGVGKTTLAEALARDYKLELLEMNASDSRNLRDIKDVAERASISGSLFG--------- 98 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++LLDEID S A+LE+++ Sbjct: 99 -IKGKIILLDEIDGIYSRADAGAIPAILELIE 129
>CLPB_RAT (Q9WTT2) Caseinolytic peptidase B protein homolog (Suppressor of| potassium transport defect 3) Length = 677 Score = 42.0 bits (97), Expect = 7e-04 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK----FIRISLGGVKDEADIRGHRRTYIGSMP--- 162 V F+G G+GKT LA AK +++ FIR+ + ++ ++ +IGS P Sbjct: 346 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV----AKFIGSPPGYI 401 Query: 163 -----GRLIDGLKRVSVSNPVMLLDEIDKTGSDV 249 G+L LK+ N V+L DE+DK DV Sbjct: 402 GHEEGGQLTKKLKQ--CPNAVVLFDEVDKAHPDV 433
>CLPB_MOUSE (Q60649) Caseinolytic peptidase B protein homolog (Suppressor of| potassium transport defect 3) Length = 677 Score = 42.0 bits (97), Expect = 7e-04 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK----FIRISLGGVKDEADIRGHRRTYIGSMP--- 162 V F+G G+GKT LA AK +++ FIR+ + ++ ++ +IGS P Sbjct: 346 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV----AKFIGSPPGYI 401 Query: 163 -----GRLIDGLKRVSVSNPVMLLDEIDKTGSDV 249 G+L LK+ N V+L DE+DK DV Sbjct: 402 GHEEGGQLTKKLKQ--CPNAVVLFDEVDKAHPDV 433
>CLPB_PARUW (Q6MD97) Chaperone clpB| Length = 868 Score = 41.6 bits (96), Expect = 0.001 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 7/144 (4%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMP 162 V F+GP GVGKT LA ++A L + IR+ + ++ + + G YIG Sbjct: 601 VFLFLGPTGVGKTELAKALAFQLFNQDEALIRLDMSEYMEKHTVSKLIGSPPGYIGYEEG 660 Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 G+L + L+R + V+L DEI+K DV + LL+V D + +N Sbjct: 661 GQLTEALRRRPYA--VVLFDEIEKAHPDV----FNILLQVFDDGRLTDSKGRVVN----C 710 Query: 343 SKVVFVATANRMQPIPPALLDRME 414 +F+ T+N + LL++ME Sbjct: 711 KNALFIMTSNIGSDL---LLEKME 731
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 41.6 bits (96), Expect = 0.001 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 8/145 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + FI G+ D+ YIG + + Sbjct: 222 GPPGTGKTLLAKAVAATIGANFIFSPASGIVDK---------YIGESARIIREMFAYAKE 272 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369 P ++ +DE+D G + SA D E +T + + FD L + + Sbjct: 273 HEPCIIFMDEVDAIGGRRFSEGTSA-----DREIQRTLMELLTQMDGFDNLGQTKIIMAT 327 Query: 370 NRMQPIPPAL-----LDRMEVIELP 429 NR + PAL LDR I LP Sbjct: 328 NRPDTLDPALLRPGRLDRKVEIPLP 352
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 41.6 bits (96), Expect = 0.001 Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 16/162 (9%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D K+ Sbjct: 211 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 261 Query: 196 VSNPVML-LDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 + P ++ +DEID G+D R + LL +D + T Sbjct: 262 ENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNT------------ 309 Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 ++ +A NR + AL+ DR +++ P Y+ +++ Sbjct: 310 -GIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEI 350
>CLPB1_STRAW (Q82EU9) Chaperone clpB 1| Length = 870 Score = 41.6 bits (96), Expect = 0.001 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R +RI + G A + G Y+G G+L Sbjct: 607 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLVGAPPGYVGYEEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +V LL+VLD Sbjct: 667 TEAVRRRPYS--VVLLDEVEKAHPEV----FDILLQVLD 699 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 11/108 (10%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + N++ + + LG + A RG + Sbjct: 203 PVL--IGEPGVGKTAVVEGLAQRIVKGDVPESLKNKRLVALDLGAMVAGAKYRGEFEERL 260 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291 ++ + D S + +DE+ G+ GD A +L P Sbjct: 261 KTVLAEIKD-----SDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKP 303
>CLPE_LACLC (Q9S5Z2) ATP-dependent Clp protease ATP-binding subunit clpE| Length = 748 Score = 41.6 bits (96), Expect = 0.001 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 FVGP GVGKT LA +AK L + IR + ++ A + G Y+G G+L Sbjct: 479 FVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQL 538 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDV 249 + ++R S ++LLDEI+K DV Sbjct: 539 TERVRRNPYS--LILLDEIEKAHPDV 562 Score = 30.4 bits (67), Expect = 2.3 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIA----------KALNRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A K N++ IR+ + + IRG Sbjct: 148 PVL--IGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQ----F 201 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291 +L+D +++ ++ +M +DEI + G+ GD +L P Sbjct: 202 EERMQKLMDEIRK--RNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKP 247
>CLPE_LACLA (Q9CI09) ATP-dependent Clp protease ATP-binding subunit clpE| Length = 748 Score = 41.6 bits (96), Expect = 0.001 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 FVGP GVGKT LA +AK L + IR + ++ A + G Y+G G+L Sbjct: 479 FVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQL 538 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDV 249 + ++R S ++LLDEI+K DV Sbjct: 539 TERVRRNPYS--LILLDEIEKAHPDV 562 Score = 30.4 bits (67), Expect = 2.3 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIA----------KALNRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A K N++ IR+ + + IRG Sbjct: 148 PVL--IGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQ----F 201 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291 +L+D +++ ++ +M +DEI + G+ GD +L P Sbjct: 202 EERMQKLMDEIRK--RNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKP 247
>CLPB_PROMP (Q7V2A3) Chaperone clpB| Length = 860 Score = 41.6 bits (96), Expect = 0.001 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L+ IAK + N R+ + ++ + I G Y+G G+L Sbjct: 606 FLGPTGVGKTELSKVIAKTIFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGGQL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + +++ S ++LLDEI+K DV LL+VLD Sbjct: 666 TEAVRKNPYS--LILLDEIEKAHKDV----LDVLLQVLD 698 Score = 33.5 bits (75), Expect = 0.27 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 21/134 (15%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + NR+ I I +G + I G + Y Sbjct: 200 PVL--IGEPGVGKTAIVEGLAQRIVNGDVPSSLNNRQLISIDMGSL-----IAGAK--YR 250 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEIDK-TGSDVRG---DPASALLEVLDPEQNK--- 303 G R+ + LK+V S ++ +DEI G+ G D ++ L +L + + Sbjct: 251 GEFEERIKNVLKKVKSSEGKIILFIDEIHTVVGAGATGGSLDASNLLKPMLARGELRCIG 310 Query: 304 --TFNDHYLNVPFD 339 T N+H N+ D Sbjct: 311 ATTINEHKQNIEKD 324
>RUVB_RHIET (Q9L9C3) Holliday junction DNA helicase ruvB| Length = 346 Score = 41.6 bits (96), Expect = 0.001 Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F S + D+ L+ L+ Sbjct: 58 FVGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDL------------AALLTNLE-- 103 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351 V+ +DEI + A+ E+L P D + +V DLSK Sbjct: 104 --ERDVLFIDEIHRLN--------PAVEEILYPAMEDYQLDLIIGEGPAARSVKIDLSKF 153 Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447 VA R+ + L DR + + L YT EE Sbjct: 154 TLVAATTRLGLLTTPLRDRFGIPVRLTFYTVEE 186
>CLPB_CLOAB (Q97KG0) Chaperone clpB| Length = 865 Score = 41.6 bits (96), Expect = 0.001 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ + IRI + ++ + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDV 249 + ++R S V+L DEI+K SDV Sbjct: 669 TEAVRRKPYS--VILFDEIEKAHSDV 692
>CLPC_BACSU (P37571) Negative regulator of genetic competence clpC/mecB| Length = 810 Score = 41.6 bits (96), Expect = 0.001 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+++ IRI + ++ + + G Y+G G+L Sbjct: 543 FLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQL 602 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K DV + LL+VL+ Sbjct: 603 TEKVRRKPYS--VVLLDEIEKAHPDV----FNILLQVLE 635
>CLPB_CORDI (Q6NF05) Chaperone clpB| Length = 849 Score = 41.6 bits (96), Expect = 0.001 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ + +R +RI + ++ A + G Y+G G+L Sbjct: 604 FLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQL 663 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DE++K DV LL+VLD Sbjct: 664 TEAVRRRPYT--VVLFDEVEKAHPDV----FDILLQVLD 696
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 41.6 bits (96), Expect = 0.001 Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 9/148 (6%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT +A ++A +N FIR+ V E R +IG RL+ L ++ Sbjct: 179 GPPGCGKTLMAKAVANHVNATFIRV----VGSEL-----VRKFIGE-GARLVHELFELAK 228 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366 ++ +DEID G+ + EV N+T + FD V +A Sbjct: 229 EKAPTIIFIDEIDAIGAKRMDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 283 Query: 367 ANRMQPIPPALL-----DRMEVIELPGY 435 NR + PALL DR+ + LP Y Sbjct: 284 TNRPDILDPALLRPGRFDRLIEVPLPDY 311
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 41.6 bits (96), Expect = 0.001 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT +A ++A +N FIR+ V E R YIG RL+ L ++ Sbjct: 181 GPPGCGKTLMAKALAHEVNATFIRV----VGSEL-----VRKYIGE-GARLVHELFELAK 230 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366 ++ +DEID G+ + EV N+T + FD V +A Sbjct: 231 EKAPTIIFIDEIDAIGAKRMDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 285 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKLKI 459 NR + PALL DR+ + LP + E +L+I Sbjct: 286 TNRPDILDPALLRPGRFDRLIEVPLPDF--EGRLEI 319
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 41.6 bits (96), Expect = 0.001 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT +A ++A +N FIR+ V E R YIG RL+ L ++ Sbjct: 181 GPPGCGKTLMAKALAHEVNATFIRV----VGSEL-----VRKYIGE-GARLVHELFELAK 230 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366 ++ +DEID G+ + EV N+T + FD V +A Sbjct: 231 EKAPTIIFIDEIDAIGAKRMDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 285 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKLKI 459 NR + PALL DR+ + LP + E +L+I Sbjct: 286 TNRPDILDPALLRPGRFDRLIEVPLPDF--EGRLEI 319
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 41.2 bits (95), Expect = 0.001 Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 8/157 (5%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 + VGPPG GKT LA +IA F IS + ++G R+ D + Sbjct: 187 ILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 237 Query: 187 RVSVSNPVML-LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP--FDLSKVVF 357 + + P ++ +DEID G RG A L E+ +T N + + V+ Sbjct: 238 QAKKNAPCLIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFSGNDGVIV 292 Query: 358 VATANRMQPIPPAL-----LDRMEVIELPGYTPEEKL 453 +A NR + PAL DR V+ LP E++ Sbjct: 293 IAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQI 329
>CLPB_PROFR (Q7WSY8) Chaperone clpB (Fragment)| Length = 729 Score = 41.2 bits (95), Expect = 0.001 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L +RI + ++ + G Y+G G+L Sbjct: 606 FLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K DV + LL+VLD Sbjct: 666 TEAVRRRPYS--VVLLDEIEKVHPDV----FNFLLQVLD 698
>CLPB_LACPL (Q88VX7) Chaperone clpB| Length = 867 Score = 41.2 bits (95), Expect = 0.001 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L + +RI + ++ + G Y+G G+L Sbjct: 605 FLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++L DEI+K DV + LL+VLD Sbjct: 665 TEAVRRNPYS--IVLFDEIEKAHPDV----FNILLQVLD 697
>CLPB_HAEIN (P44403) Chaperone clpB| Length = 856 Score = 41.2 bits (95), Expect = 0.001 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++AK L +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K +DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHADV----FNILLQVLD 695
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 41.2 bits (95), Expect = 0.001 Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 16/154 (10%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA + F IS + ++G R+ D K+ Sbjct: 210 VGPPGTGKTLLAKAIAGEASAPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 260 Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 P ++ +DEID G+D R + LL +D T Sbjct: 261 EKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDT------------ 308 Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELP 429 V+ VA NR+ + ALL DR ++ LP Sbjct: 309 -GVIVVAATNRIDVLDSALLRPGRFDRQIMVSLP 341
>CLPB_TROW8 (Q83N78) Chaperone clpB| Length = 699 Score = 41.2 bits (95), Expect = 0.001 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL-NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLID 177 F+GP GVGKT L ++A L + + +RI + ++ I G YIG G+L + Sbjct: 447 FLGPTGVGKTQLVKALASLLYDGEIVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTE 506 Query: 178 GLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVF 357 ++R S V+L DE +K +V LL+VLD + + + H V D + Sbjct: 507 SVRRRPYS--VVLFDEAEKAHPEV----FDILLQVLD--EGRLTDSHGRTV--DFRNTII 556 Query: 358 VATAN 372 V T+N Sbjct: 557 VLTSN 561
>CLPB_STRCO (Q8CJV9) Chaperone clpB| Length = 865 Score = 41.2 bits (95), Expect = 0.001 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R +RI + ++ A + G Y+G G+L Sbjct: 607 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+LLDE++K +V LL+VLD Sbjct: 667 TEAVRRRPYT--VVLLDEVEKAHPEV----FDILLQVLD 699 Score = 29.6 bits (65), Expect = 3.8 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 11/108 (10%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + +++ + + LG + A RG + Sbjct: 203 PVL--IGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVALDLGAMVAGAKYRGEFEERL 260 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291 ++ + D S V +DE+ G+ GD A +L P Sbjct: 261 KTVLAEIKD-----SDGQVVTFIDELHTVVGAGAGGDSAMDAGNMLKP 303
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 41.2 bits (95), Expect = 0.001 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 8/145 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A +L F+++ + D+ YIG + + Sbjct: 173 GPPGTGKTLLARAVAASLGVNFLKVVSSAIVDK---------YIGESARIIREMFGYAKE 223 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369 P V+ +DEID G + SA D E +T + + FD L + + Sbjct: 224 HEPCVIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDYLGQTKIIMAT 278 Query: 370 NRMQPIPPAL-----LDRMEVIELP 429 NR + PAL LDR I LP Sbjct: 279 NRPDTLDPALLRPGRLDRKIEIPLP 303
>CLPB1_CHLTE (Q8KG79) Probable chaperone clpB 1| Length = 438 Score = 41.2 bits (95), Expect = 0.001 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L IRI + + + G Y+G G+L Sbjct: 176 FLGPTGVGKTELARTLAEYLFDDEDALIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQL 235 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K DV + LL++LD Sbjct: 236 TEAVRRKPFS--VVLLDEIEKAHPDV----FNILLQILD 268
>CLPB_STRAL (Q9Z6E4) Chaperone clpB| Length = 857 Score = 41.2 bits (95), Expect = 0.001 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L R IRI + G A + G Y+G G+L Sbjct: 603 FLGPTGVGKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K V LL+VLD Sbjct: 663 TEAVRRRPYS--VVLLDEVEKAHPGV----FDILLQVLD 695
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 41.2 bits (95), Expect = 0.001 Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 15/161 (9%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A + F RIS + ++G R+ D K+ Sbjct: 180 VGPPGTGKTLLARAVAGEASVPFFRISGSDFIE---------MFVGIGASRVRDLFKQAR 230 Query: 196 VSNP-VMLLDEIDKTG---------SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345 P ++ +DE+D G +D R + LL +D N T Sbjct: 231 EKAPGIIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTT------------- 277 Query: 346 KVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 ++ +A NR + PALL DR ++ P E + Sbjct: 278 GLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAI 318
>CLPB_TROWT (Q83FI1) Chaperone clpB| Length = 705 Score = 41.2 bits (95), Expect = 0.001 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL-NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLID 177 F+GP GVGKT L ++A L + + +RI + ++ I G YIG G+L + Sbjct: 453 FLGPTGVGKTQLVKALASLLYDGEIVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTE 512 Query: 178 GLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVF 357 ++R S V+L DE +K +V LL+VLD + + + H V D + Sbjct: 513 SVRRRPYS--VVLFDEAEKAHPEV----FDILLQVLD--EGRLTDSHGRTV--DFRNTII 562 Query: 358 VATAN 372 V T+N Sbjct: 563 VLTSN 567
>CLPB_ENTFA (Q831Y7) Chaperone clpB| Length = 868 Score = 40.8 bits (94), Expect = 0.002 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 9/154 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +RI + ++ + + G Y+G G+L Sbjct: 606 FLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQL 665 Query: 172 IDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345 + ++R NP ++LLDEI+K DV + LL+VLD + + D Sbjct: 666 TEAVRR----NPYTIVLLDEIEKAHPDV----FNILLQVLDDGRLTDSKGRVV----DFK 713 Query: 346 KVVFVATANRMQPIPPALLDRMEVIELPGYTPEE 447 V + T+N I LL +E + G PEE Sbjct: 714 NTVLIMTSN----IGSQLL--LEGVTPEGTIPEE 741 Score = 28.5 bits (62), Expect = 8.6 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDE--------ADIRGHRRTYIGS 156 PVL +G PGVGKT++ +A+ + RK + +L KD+ A I G + + G Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVPENL---KDKTIFSLDMGALIAGAK--FRGE 256 Query: 157 MPGRLIDGLKRVSVSNP--VMLLDEI 228 RL LK V S+ ++ +DEI Sbjct: 257 FEERLKAVLKEVKKSDGKIILFIDEI 282
>CLPB1_ANASP (Q8YUL9) Chaperone clpB 1| Length = 880 Score = 40.8 bits (94), Expect = 0.002 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L + +R+ + ++ + G Y+G G+L Sbjct: 612 FMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 671 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 672 SEAVRRHPYS--VVLLDEVEKAHPDV----FNILLQVLD 704 Score = 36.2 bits (82), Expect = 0.041 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 15/100 (15%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A ++A+ + NR+ I + +G + I G + Y Sbjct: 204 PVL--IGEPGVGKTAIAEALAQRIVNGDVPESLKNRQLISLDIGSL-----IAGAK--YR 254 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEIDK---TGSDVRG 255 G RL L+ V+ SN V+ +DE+ TGS+ +G Sbjct: 255 GEFEDRLKAVLREVTESNGNIVLFIDELHTVVGTGSNQQG 294
>CLPB_CHRVO (Q7NWN7) Chaperone clpB| Length = 859 Score = 40.8 bits (94), Expect = 0.002 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 607 FLGPTGVGKTELCKTLASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+LLDE++K DV + LL+VLD + + D Sbjct: 667 TEQVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLDDGRLTDGQGRTV----DFKNT 716 Query: 352 VFVATAN-RMQPIPPALLDRMEVIEL 426 V V T+N Q I D +VI+L Sbjct: 717 VIVMTSNIGSQQIQAMATDDYQVIKL 742
>CLPB2_SYNEL (Q8DG71) Chaperone clpB 2| Length = 887 Score = 40.8 bits (94), Expect = 0.002 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+AL +RI + ++ + G Y+G G+L Sbjct: 617 FMGPTGVGKTELARALAEALFDDENALVRIDMSEYMEKHAVSRMIGAPPGYVGFDSGGQL 676 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DE++K +V + LL+VLD Sbjct: 677 TEAIRRRPYA--VVLFDEVEKAHPEV----FNVLLQVLD 709 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 10/54 (18%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRG 132 PVL +G PGVGKT++A +A+ + NR+ I + LG + A RG Sbjct: 203 PVL--IGEPGVGKTAIAEGLAQRIINGDVPESLKNRRLISLDLGSLVAGAKFRG 254
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 40.8 bits (94), Expect = 0.002 Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 11/158 (6%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISL----GGVKDEADIRGHRRTYIGSMPGRLI 174 L VG G GK+ A SIA N +++ + GG+ E++ R + Sbjct: 278 LLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAE------ 331 Query: 175 DGLKRVSVSNPVMLLDEIDK--TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 348 ++S ++ +DEIDK TGS+ D + + F + S Sbjct: 332 ------TISPCILWIDEIDKAFTGSNFNNDSGTT---------KRVFGTFITWLSEKKSP 376 Query: 349 VVFVATANRMQPIPPALL-----DRMEVIELPGYTPEE 447 V VATAN + +PP LL D + I LP E Sbjct: 377 VFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERE 414
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 40.8 bits (94), Expect = 0.002 Identities = 31/94 (32%), Positives = 41/94 (43%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPGVGKTSL +IA N + I ++ + +DI I R KR Sbjct: 56 GPPGVGKTSLVEAIASEFNLEMIELNASDYRRRSDIE-----RIVGAASRKRSMFKR--- 107 Query: 199 SNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 300 V+LLDE+D ALL V+ +N Sbjct: 108 -GVVILLDEVDGINPREDAGGIEALLSVIKTTEN 140
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 40.8 bits (94), Expect = 0.002 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 8/149 (5%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 + VGPPG GKT LA +IA + F ++ + +IG R+ D K Sbjct: 222 ILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVE---------MFIGIGAARVRDLFK 272 Query: 187 RVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357 + S + P ++ +DEID G + RG A + + E+ +T N + F +K V+ Sbjct: 273 KASENAPCIVFIDEIDAVGRE-RG----AGVGGGNDEREQTLNQLLTEMDGFKENKGVIV 327 Query: 358 VATANRMQPIPPALL-----DRMEVIELP 429 V NR + ALL DR + LP Sbjct: 328 VGATNRADILDAALLRPGRFDRQVTVNLP 356
>CLPB_CLOTE (Q898C7) Chaperone clpB| Length = 865 Score = 40.8 bits (94), Expect = 0.002 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++ K L IRI + ++ + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K DV + L++LD Sbjct: 669 TEAVRRKPYS--VILFDEIEKAHDDV----FNIFLQILD 701
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 40.8 bits (94), Expect = 0.002 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 16/162 (9%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A F IS + ++G R+ D ++ Sbjct: 200 VGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFEQAK 250 Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 + P ++ +DEID G+D R + LL +D + T Sbjct: 251 ANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNT------------ 298 Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 ++ VA NR + AL+ DR V++ P Y ++ Sbjct: 299 -GIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREI 339
>CLPB_GLOVI (Q7NFE9) Chaperone clpB| Length = 872 Score = 40.8 bits (94), Expect = 0.002 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L +RI + ++ + G Y+G G+L Sbjct: 610 FLGPTGVGKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQL 669 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DEI+K +DV + LL+VLD Sbjct: 670 TEAVRRRPYA--VVLFDEIEKAHNDV----FNVLLQVLD 702 Score = 30.8 bits (68), Expect = 1.7 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + RK I + +G + I G + Y Sbjct: 205 PVL--IGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKLIALDMGAL-----IAGSK--YR 255 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228 G RL L V+ S V+ +DEI Sbjct: 256 GEFEERLKAVLNEVTKSEGQIVLFIDEI 283
>CLPB_CHLPN (Q7AJA9) Chaperone clpB| Length = 866 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162 V F+GP GVGKT LA ++A L K +R + ++ I G Y+G Sbjct: 600 VFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVGYEEG 659 Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 G L + L+R S V+L DEI+K +V + LL+V D Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----LNILLQVFD 695
>CLPB_DEIRA (Q9RVI3) Chaperone clpB| Length = 852 Score = 40.4 bits (93), Expect = 0.002 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L + +RI + ++ A + G Y+G G+L Sbjct: 593 FLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEEGGQL 652 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DEI+K DV + LL+VLD Sbjct: 653 TEAVRRRPYA--VILFDEIEKAHPDV----FNVLLQVLD 685 Score = 28.9 bits (63), Expect = 6.6 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 10/54 (18%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRG 132 PVL +G PGVGKT++A +A + ++K + + +G + A RG Sbjct: 194 PVL--IGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIVSLEMGSLLAGAKFRG 245
>CLPB_COREF (Q8FM94) Chaperone clpB| Length = 852 Score = 40.4 bits (93), Expect = 0.002 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++++ L R +RI + ++ A + G Y+G G+L Sbjct: 606 FLGPTGVGKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + +L DE++K DV LL+VLD Sbjct: 666 TEAVRRRPYT--TVLFDEVEKAHPDV----FDILLQVLD 698
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 40.4 bits (93), Expect = 0.002 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 13/160 (8%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT +A + A N F++++ + + +IG + D + Sbjct: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLV---------QMFIGDGAKLVRDAFQLAKE 261 Query: 199 SNP-VMLLDEIDKTG-----SDVRGD--PASALLEVLDPEQNKTFNDHYLNVPFDLSKVV 354 +P ++ +DEID G S+V GD +LE+L+ + +D ++ Sbjct: 262 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD----------RIK 311 Query: 355 FVATANRMQPIPPAL-----LDRMEVIELPGYTPEEKLKI 459 +A NR + PAL LDR IE P T E + +I Sbjct: 312 VIAATNRADILDPALMRSGRLDRK--IEFPHPTEEARARI 349
>CLPB_HAEDU (Q7VNH1) Chaperone clpB| Length = 856 Score = 40.4 bits (93), Expect = 0.002 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L+ ++A L +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELSKTLANFLFDDENAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEQGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VVLLDEVEKAHPDV----FNILLQVLD 695
>RUVB_BRUSU (Q8FZ02) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.4 bits (93), Expect = 0.002 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F R + G V +A T + ID + R+ Sbjct: 57 FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115 Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369 S + +L ++ D + G+ +A +V DL+K VA Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158 Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447 R+ + L DR + + L YT EE Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185
>RUVB_BRUME (Q8YIV5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.4 bits (93), Expect = 0.002 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F R + G V +A T + ID + R+ Sbjct: 57 FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115 Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369 S + +L ++ D + G+ +A +V DL+K VA Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158 Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447 R+ + L DR + + L YT EE Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185
>RUVB_BRUAB (Q57BH8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.4 bits (93), Expect = 0.002 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F R + G V +A T + ID + R+ Sbjct: 57 FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115 Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369 S + +L ++ D + G+ +A +V DL+K VA Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158 Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447 R+ + L DR + + L YT EE Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185
>RUVB_BRUA2 (Q2YRD2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.4 bits (93), Expect = 0.002 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F R + G V +A T + ID + R+ Sbjct: 57 FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115 Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369 S + +L ++ D + G+ +A +V DL+K VA Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158 Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447 R+ + L DR + + L YT EE Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185
>RUVB_AGRT5 (Q8U9K6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.4 bits (93), Expect = 0.002 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F S + D+ L+ L+ Sbjct: 58 FVGPPGLGKTTLAQIMAKELGVNFKSTSGPVIAKAGDL------------AALLTNLE-- 103 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351 V+ +DEI + A+ E+L P D + +V DLSK Sbjct: 104 --ERDVLFIDEIHRLN--------PAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLSKF 153 Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447 VA R+ + L DR + + L YT +E Sbjct: 154 TLVAATTRLGLLTTPLRDRFGIPVRLAFYTVDE 186
>RUVB_BARQU (Q6FYP6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 361 Score = 40.4 bits (93), Expect = 0.002 Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+L+ +AK L F S + D+ L+ L+ Sbjct: 57 FVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKSGDL------------AALLTNLE-- 102 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351 V+ +DEI + A+ E+L P D L +V DL+K Sbjct: 103 --ERDVLFIDEIHRLN--------PAIEEILYPAMEDYQLDLILGEGPAARSVKIDLAKF 152 Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447 VA R+ + L DR + I L YT EE Sbjct: 153 TLVAATTRLGLLTTPLRDRFGIPIRLNFYTIEE 185
>CLPB_BORPE (Q7VYV6) Chaperone clpB| Length = 865 Score = 40.4 bits (93), Expect = 0.002 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 609 FLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 669 TEAVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 701
>CLPB_BORPA (Q7W9E6) Chaperone clpB| Length = 865 Score = 40.4 bits (93), Expect = 0.002 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 609 FLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 669 TEAVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 701
>CLPB_BORBR (Q7WHB6) Chaperone clpB| Length = 865 Score = 40.4 bits (93), Expect = 0.002 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 609 FLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 669 TEAVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 701
>CLPB_SHEON (Q8EBE6) Chaperone clpB| Length = 857 Score = 40.4 bits (93), Expect = 0.002 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L S+A+ L +RI + ++ + + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKSLARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 29.6 bits (65), Expect = 3.8 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + N++ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERL 259 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 ++ L +V ++ +DE+ +GD A +L P Sbjct: 260 KAVLNELAQEEGQV-----ILFIDELHTMVGAGKGDGAMDAGNMLKP 301
>CLPB_WOLPM (Q73IE4) Chaperone clpB| Length = 853 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +R + ++ + G Y+G GRL Sbjct: 602 FLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRL 661 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R V+L DEI+K D+ + LL++LD + + + H D Sbjct: 662 TEAVRRRPYQ--VILFDEIEKANPDI----FNLLLQILD--EGRLTDSH--GKLIDFRNT 711 Query: 352 VFVATAN 372 + + T+N Sbjct: 712 ILILTSN 718
>CLPB_BLOFL (Q7VQF3) Chaperone clpB| Length = 872 Score = 40.0 bits (92), Expect = 0.003 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIGSMPGR-L 171 F+GP GVGKT L ++++ L + +RI + ++ + + G YIG G L Sbjct: 605 FLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGAYL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S ++LLDEI+K DV + LL+VLD + T N + D + Sbjct: 665 TESIRRRPYS--IVLLDEIEKAHLDV----FNILLQVLD-DGRLTDNQGRM---VDFNNT 714 Query: 352 VFVATAN 372 V + T+N Sbjct: 715 VIIMTSN 721
>CLPB_LISMO (Q8Y570) Chaperone clpB| Length = 866 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A + IRI + ++ + G YIG G+L Sbjct: 609 FLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYIGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++LLDEI+K DV + LL+VLD Sbjct: 669 TEAVRRNPYS--IVLLDEIEKAHPDV----FNILLQVLD 701 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 PVL +G PGVGKT++ +A+ + RK + G+KD +T I G LI G Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVP---EGLKD--------KTIISLDIGSLIAG 250 Query: 181 LK 186 K Sbjct: 251 AK 252
>CLPB_LISIN (Q929G7) Chaperone clpB| Length = 866 Score = 40.0 bits (92), Expect = 0.003 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A + IRI + ++ + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++LLDEI+K DV + LL+VLD Sbjct: 669 TEAVRRNPYS--IVLLDEIEKAHPDV----FNILLQVLD 701 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 PVL +G PGVGKT++ +A+ + RK + G+KD +T I G LI G Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVP---EGLKD--------KTIISLDIGSLIAG 250 Query: 181 LK 186 K Sbjct: 251 AK 252
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 40.0 bits (92), Expect = 0.003 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 16/154 (10%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA + F IS + ++G R+ D K+ Sbjct: 193 VGPPGTGKTLLAKAIAGEASVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 243 Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 + P ++ +DEID G+D R + LL +D + T Sbjct: 244 QNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNT------------ 291 Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELP 429 V+ +A NR+ + ALL DR ++ +P Sbjct: 292 -GVIVIAATNRVDVLDAALLRPGRFDRQIMVSMP 324
>RUVB_RHIME (Q92M92) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.0 bits (92), Expect = 0.003 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +AK L F S + D+ L+ L+ Sbjct: 58 FVGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDL------------AALLTNLE-- 103 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351 V+ +DEI + A+ E+L P D + +V DL+K Sbjct: 104 --ERDVLFIDEIHRLN--------PAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKF 153 Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447 VA R+ + L DR + + L YT EE Sbjct: 154 TLVAATTRLGLLTTPLRDRFGIPVRLNFYTVEE 186
>CLPB_MYCPN (P75247) Chaperone clpB| Length = 715 Score = 40.0 bits (92), Expect = 0.003 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+G GVGKT LA S+A+ L + IR + ++ A + G Y+G G L Sbjct: 464 FLGSTGVGKTELAKSLAEVLFDNEKAMIRFDMSEYMEKHSVAKLIGAPPGYVGYEQSGLL 523 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R V+L DEI+K DV + LL+VLD Sbjct: 524 TEAVRRKPYC--VLLFDEIEKAHPDV----TNILLQVLD 556 Score = 28.5 bits (62), Expect = 8.6 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVK-DEADIRG--HRRTYIGSMPGRL 171 PVL +G PGVGKT++ + + + ++L V+ E + G Y G R+ Sbjct: 56 PVL--IGEPGVGKTAIVEGFVRRVVNNDVPLNLRDVEIYELSLSGLIAGTQYQGEFEKRV 113 Query: 172 IDGLKRVSVSNP--VMLLDEI 228 LK+V SN ++ +DEI Sbjct: 114 NGILKQVKESNGKIILFIDEI 134
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 40.0 bits (92), Expect = 0.003 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A + F S+GG ++G R+ D + Sbjct: 209 VGPPGTGKTLLAKAVAGEAHVPF--FSMGG-------SSFIEMFVGLGASRVRDLFETAK 259 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP---FDLSKVVFVA 363 P ++ +DEID G + A ++ D E+ +T N + + + V+ +A Sbjct: 260 KQAPSIIFIDEIDAIG---KSRAAGGMISGND-EREQTLNQLLAEMDGFGSENAPVIVLA 315 Query: 364 TANRMQPIPPALL-----DRMEVIELPGY 435 NR + + PAL+ DR +++ P + Sbjct: 316 ATNRPEILDPALMRPGRFDRQVLVDKPDF 344
>CLPB_PHOLL (Q7N788) Chaperone clpB| Length = 857 Score = 40.0 bits (92), Expect = 0.003 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L + +RI + ++ + + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K SDV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHSDV----FNILLQVLD 695 Score = 30.0 bits (66), Expect = 2.9 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + N++ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>CLPB_CAMJE (Q9PI02) Chaperone clpB| Length = 857 Score = 40.0 bits (92), Expect = 0.003 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT A ++AK L + IR + ++ + G YIG G L Sbjct: 606 FLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGEL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DE++K DV + LL +LD + V D Sbjct: 666 TEAVRRKPYS--VLLFDEVEKAHKDV----FNVLLGILDDGRATDSK----GVTVDFKNT 715 Query: 352 VFVATAN 372 + + T+N Sbjct: 716 IIILTSN 722 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVK-----DEADIRGHRRTYIGSMPG 165 P+L +G PGVGKT++ ++A+ + +K + SL K A I G + Y G Sbjct: 203 PIL--LGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIALDMSALIAGAK--YRGEFED 258 Query: 166 RLIDGLKRVSVS-NPVMLLDEI 228 RL + V S N ++ +DEI Sbjct: 259 RLKAVVNEVIKSENIILFIDEI 280
>CLPB_COXBU (Q83F55) Chaperone clpB| Length = 859 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L +RI + ++ A + G Y+G G L Sbjct: 605 FLGPTGVGKTELCKALAVFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDEI+K +DV + LL+VLD Sbjct: 665 TEAIRRRPYS--VILLDEIEKAHNDV----FNVLLQVLD 697
>CLPB_PLEBO (O87444) Chaperone clpB| Length = 873 Score = 39.7 bits (91), Expect = 0.004 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L +RI + ++ + G Y+G G+L Sbjct: 610 FLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQL 669 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K DV + +L++LD Sbjct: 670 TEAVRRRPYS--VILFDEIEKAHPDV----FNVMLQILD 702 Score = 33.9 bits (76), Expect = 0.20 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + +RK I + +G + I G + Y Sbjct: 205 PVL--IGEPGVGKTAIAEGLAQRILSGDVPQSLKDRKLIALDMGAL-----IAGAK--YR 255 Query: 151 GSMPGRLIDGLKRVSVS--NPVMLLDEI 228 G RL LK V+ S N ++ +DEI Sbjct: 256 GEFEERLKAVLKEVTDSRGNIILFIDEI 283
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 39.7 bits (91), Expect = 0.004 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 6/149 (4%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A F + + G +D +G R+ D + Sbjct: 268 GPPGTGKTLLAKAVAGEAGVPFFQSTGSGFED---------MLVGVGAKRVRDLFNKAKK 318 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANR 375 + P ++ +DEID GS RG + V++ N+ + ++ + VV +A NR Sbjct: 319 AAPCIIFIDEIDSVGSK-RGRVELSSYSVVEQTLNQLLAE--MDGFTSRTGVVVMAATNR 375 Query: 376 MQPIPPALL-----DRMEVIELPGYTPEE 447 + + ALL DR I LP E Sbjct: 376 LDVLDDALLRPGRFDRHIQINLPDIKERE 404
>CLPB1_SYNY3 (P74459) Chaperone clpB 1| Length = 898 Score = 39.7 bits (91), Expect = 0.004 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L +RI + ++ + + G Y+G G+L Sbjct: 618 FMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 677 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 678 SEAVRRRPYS--VVLLDEVEKAHLDV----FNILLQVLD 710 Score = 32.3 bits (72), Expect = 0.59 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + NR+ I + +G + I G + Y Sbjct: 204 PVL--IGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLISLDMGSL-----IAGAK--YR 254 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228 G RL +K V+ S+ ++ +DE+ Sbjct: 255 GEFEERLRSVMKEVTNSDGQIILFIDEV 282
>CLPB_STRMU (Q8DTC7) Chaperone clpB| Length = 860 Score = 39.7 bits (91), Expect = 0.004 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT+LA +A+ L + +R+ + ++ + + G Y+G G+L Sbjct: 601 FLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPPGYVGYEEGGQL 660 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + +++ S ++LLDEI+K DV + LL+VLD Sbjct: 661 TEAVRQRLYS--IVLLDEIEKAHPDV----FNTLLQVLD 693
>RUVB_BARHE (Q6G5R1) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 361 Score = 39.7 bits (91), Expect = 0.004 Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 8/153 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+L+ +AK L F S + D+ L+ L+ Sbjct: 60 FVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKAGDL------------AALLTNLE-- 105 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351 V+ +DEI + + A+ E+L P D + +V DL+K Sbjct: 106 --ERDVLFIDEIHRL--------SPAIEEILYPAMEDYQLDLIIGEGPAARSVKIDLAKF 155 Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447 VA R+ + L DR + I L YT EE Sbjct: 156 TLVAATTRLGLLTTPLRDRFGIPIRLNFYTIEE 188
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 39.7 bits (91), Expect = 0.004 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 10/150 (6%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A + F S+GG ++G R+ D + Sbjct: 209 VGPPGTGKTLLAKAVAGEAHVPF--FSMGG-------SSFIEMFVGLGASRVRDLFETAK 259 Query: 196 VSNP-VMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVP---FDLSKVVFV 360 P ++ +DEID G S G S + E+ +T N + + + V+ + Sbjct: 260 KQAPSIIFIDEIDAIGKSRAAGGVVSG-----NDEREQTLNQLLAEMDGFGSENAPVIVL 314 Query: 361 ATANRMQPIPPALL-----DRMEVIELPGY 435 A NR + + PAL+ DR +++ P + Sbjct: 315 AATNRPEILDPALMRPGRFDRQVLVDKPDF 344
>CLPB_GEOSL (Q74FF1) Chaperone clpB| Length = 865 Score = 39.7 bits (91), Expect = 0.004 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT A ++A+ L ++ +RI + +++ A + G Y+G G+L Sbjct: 609 FLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++L DEI+K +V + LL+VLD Sbjct: 669 TEAVRRRPYS--IVLFDEIEKAHPEV----FNVLLQVLD 701
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 39.7 bits (91), Expect = 0.004 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183 VL F GPPG GKT LA ++A FI + + + ++G + + Sbjct: 489 VLLF-GPPGTGKTLLAKAVANESGANFISVKGPEIFSK---------WVGESEKAIREIF 538 Query: 184 KRVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360 ++ S P ++ DEID D +SA V D N+ + L+ + VV + Sbjct: 539 RKARQSAPCIIFFDEIDAIAPKRGRDLSSA---VTDKVVNQLLTE--LDGMEEPKDVVVI 593 Query: 361 ATANRMQPIPPALL--DRME-VIELPGYTPEEKLKI 459 A NR I PALL R++ VI +P P+EK ++ Sbjct: 594 AATNRPDIIDPALLRPGRLDRVILVP--VPDEKARL 627 Score = 34.3 bits (77), Expect = 0.16 Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 6/144 (4%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A F I+ + + Y+G L + Sbjct: 219 VGPPGTGKTLLAKAVANEAGANFYVINGPEIMSK---------YVGETEENLRKIFEEAE 269 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372 + P ++ +DEID + D A+ +E Q T D +VV + N Sbjct: 270 ENAPSIIFIDEIDAIAP--KRDEATGEVERRLVAQLLTLMDGLKG----RGQVVVIGATN 323 Query: 373 RMQPIPPAL-----LDRMEVIELP 429 R + PAL DR VI +P Sbjct: 324 RPNALDPALRRPGRFDREIVIGVP 347
>CLPB_CHLTR (O84115) Chaperone clpB| Length = 867 Score = 39.7 bits (91), Expect = 0.004 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162 V F+GP GVGKT LA ++A+ L K IR + ++ + G Y+G Sbjct: 600 VFLFLGPTGVGKTELAKALAELLFNKEEAMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEG 659 Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 G L + L+R S V+L DEI+K +V + LL++ D Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----FNILLQIFD 695
>CLPB_CHLMU (Q9PKS5) Chaperone clpB| Length = 867 Score = 39.7 bits (91), Expect = 0.004 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162 V F+GP GVGKT LA ++A+ L K IR + ++ + G Y+G Sbjct: 600 VFLFLGPTGVGKTELAKALAELLFNKEEAMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEG 659 Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 G L + L+R S V+L DEI+K +V + LL++ D Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----FNILLQIFD 695
>RFCL_SULTO (Q975D4) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 440 Score = 39.7 bits (91), Expect = 0.004 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR--GHRRTYIGSMPGRLIDGLKRV 192 GPPGVGKT+LA ++A+ + ++ ++ DIR R + G++ G Sbjct: 48 GPPGVGKTTLAEALARDYKLELFEMNASDSRNLNDIRTMAERASITGTIFG--------- 98 Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++LLDE+D + A+LE+++ Sbjct: 99 -IKGKLILLDEVDGLNARADAGAIDAILELIN 129
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 39.7 bits (91), Expect = 0.004 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 6/149 (4%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A F + + G +D +G R+ D + Sbjct: 271 GPPGTGKTLLAKAVAGEAGVPFFQSTGSGFED---------MLVGVGAKRVRDLFNKAKK 321 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANR 375 + P ++ +DEID GS RG + V++ N+ + ++ + VV +A NR Sbjct: 322 AAPCIIFIDEIDSVGSK-RGRVELSSYSVVEQTLNQLLAE--MDGFTSRTGVVVMAATNR 378 Query: 376 MQPIPPALL-----DRMEVIELPGYTPEE 447 + + ALL DR I LP E Sbjct: 379 LDVLDDALLRPGRFDRHIQINLPDIKERE 407
>CLPB_LISMF (Q71XF9) Chaperone clpB| Length = 866 Score = 39.7 bits (91), Expect = 0.004 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A + IRI + ++ + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++LLDEI+K DV + LL+VLD Sbjct: 669 TEAVRRNPYS--IVLLDEIEKAHPDV----FNILLQVLD 701 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180 PVL +G PGVGKT++ +A+ + RK + G+KD +T I G LI G Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVP---EGLKD--------KTIISLDIGSLIAG 250 Query: 181 LK 186 K Sbjct: 251 AK 252
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 39.3 bits (90), Expect = 0.005 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A + F S+GG ++G R+ D Sbjct: 215 VGPPGTGKTLLAKAVAGEASVPF--FSMGG-------SSFIEMFVGLGASRVRDLFDIAK 265 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP---FDLSKVVFVA 363 P ++ +DEID G + A ++ D E+ +T N + + + V+ +A Sbjct: 266 KEAPSIIFIDEIDAIG---KSRAAGGMISGND-EREQTLNQLLAEMDGFGSENAPVIVLA 321 Query: 364 TANRMQPIPPALL-----DRMEVIELPGY 435 NR + + PALL DR +++ P + Sbjct: 322 ATNRPEILDPALLRPGRFDRQVLVDKPDF 350
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 39.3 bits (90), Expect = 0.005 Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 6/134 (4%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA + A N FI +S + ++G P R+ D Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLE---------MFVGVGPARVRDLFALARK 398 Query: 199 SNP-VMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD----LSKVVFV 360 + P ++ +DEID G RG+ EQ T N L V D + VV + Sbjct: 399 NAPCILFIDEIDAVGRKRGRGNFGG------QSEQENTLNQ--LLVEMDGFNTTTNVVIL 450 Query: 361 ATANRMQPIPPALL 402 A NR + PALL Sbjct: 451 AGTNRPDILDPALL 464
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 39.3 bits (90), Expect = 0.005 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 16/156 (10%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F IS + ++G R+ D K+ Sbjct: 212 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 262 Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342 + P ++ +DEID G+D R + LL +D + T Sbjct: 263 DNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNT------------ 310 Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELPGY 435 V+ +A NR + ALL DR +++P + Sbjct: 311 -GVIVIAATNRADILDSALLRPGRFDRQVSVDVPDF 345
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 39.3 bits (90), Expect = 0.005 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 3/131 (2%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A F IS + ++G R+ D ++ Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTISGSDFVE---------MFVGVGASRVRDLFEQAKQ 253 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP--FDLSKVVFVATA 369 ++P ++ +DEID G RG A L E+ +T N + + D + V+ +A Sbjct: 254 NSPCIIFVDEIDAVGRQ-RG----AGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAAT 308 Query: 370 NRMQPIPPALL 402 NR + PALL Sbjct: 309 NRPDILDPALL 319
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 39.3 bits (90), Expect = 0.005 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 3/131 (2%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A F IS + ++G R+ D ++ Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTISGSDFVE---------MFVGVGASRVRDLFEQAKQ 253 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP--FDLSKVVFVATA 369 ++P ++ +DEID G RG A L E+ +T N + + D + V+ +A Sbjct: 254 NSPCIIFVDEIDAVGRQ-RG----AGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAAT 308 Query: 370 NRMQPIPPALL 402 NR + PALL Sbjct: 309 NRPDILDPALL 319
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 39.3 bits (90), Expect = 0.005 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 10/138 (7%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT L ++A + FIR++ + Y+G P + D + Sbjct: 207 GPPGTGKTMLVKAVANSTTASFIRVNGSEFVQK---------YLGEGPRMVRDVFRMARE 257 Query: 199 SNP-VMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 348 ++P ++ +DEID +TG+D + LLE+L+ Q F S Sbjct: 258 NSPAIIFIDEIDAIATKRFDAQTGAD--REVQRILLELLN--QMDGFEQS--------SN 305 Query: 349 VVFVATANRMQPIPPALL 402 V + NR + PALL Sbjct: 306 VKVIMATNRADTLDPALL 323
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 39.3 bits (90), Expect = 0.005 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + F+R+ V E + Y+G P +L+ L RV+ Sbjct: 225 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 274 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372 + ++ +DEID G+ R D S + + N L+ V + N Sbjct: 275 EHAPSIVFIDEIDAVGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 331 Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456 R++ + PAL+ + IE P P+EK K Sbjct: 332 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 360
>CLPB_PASMU (Q9CKC0) Chaperone clpB| Length = 855 Score = 39.3 bits (90), Expect = 0.005 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L +RI + ++ + G Y+G G L Sbjct: 602 FLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 661 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 662 TEAVRRRPYS--VILLDEVEKAHHDV----FNILLQVLD 694
>CLPB_RALSO (Q8XZR0) Chaperone clpB| Length = 862 Score = 39.3 bits (90), Expect = 0.005 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ + G Y+G G L Sbjct: 606 FLGPTGVGKTELCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYL 665 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 666 TEAVRRKPYS--VVLLDEVEKAHPDV----FNILLQVLD 698
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 39.3 bits (90), Expect = 0.005 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS- 195 GPPG GKT LA ++A + FIR++ + + +IG RL+ L ++ Sbjct: 220 GPPGTGKTLLAKAVANHADATFIRLAAPELVQK---------FIGE-GARLVRELFELAR 269 Query: 196 -VSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366 + ++ +DEID G+ D S D E +T + FD L + +A Sbjct: 270 EKAPSIIFIDEIDAIGARRMRDATSG-----DREVQRTLTQLLAEMDGFDPLDDIKVIAA 324 Query: 367 ANRMQPIPPALL-----DRMEVIELP 429 NR + PALL DR I LP Sbjct: 325 TNRKDILDPALLRPGRFDRHIKIPLP 350
>CLPB_XYLFT (Q87AX8) Chaperone clpB| Length = 861 Score = 39.3 bits (90), Expect = 0.005 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIGSMPGRLI 174 F+GP GVGKT L ++A+ L +RI + ++ A + G Y+G G + Sbjct: 603 FLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662 Query: 175 DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 L R + ++LLDE++K SDV + LL+VLD Sbjct: 663 TELVRRRPYS-LILLDEVEKAHSDV----FNILLQVLD 695
>CLPB_XYLFA (Q9PGC1) Chaperone clpB| Length = 861 Score = 39.3 bits (90), Expect = 0.005 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIGSMPGRLI 174 F+GP GVGKT L ++A+ L +RI + ++ A + G Y+G G + Sbjct: 603 FLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662 Query: 175 DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 L R + ++LLDE++K SDV + LL+VLD Sbjct: 663 TELVRRRPYS-LILLDEVEKAHSDV----FNILLQVLD 695
>HSP78_CANAL (Q96UX5) Heat shock protein 78, mitochondrial precursor| Length = 812 Score = 39.3 bits (90), Expect = 0.005 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP G GKT L S+A+ L +R + +++ I G Y+G G L Sbjct: 532 FLGPTGTGKTELTKSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGEL 591 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S V+L DE +K D+ + LL+VLD + + H + D Sbjct: 592 TEAVRRKPYS--VVLFDEFEKAHPDL----SKLLLQVLD--EGSLTDSHGKKI--DFKNT 641 Query: 352 VFVATANRMQPI 387 + V T+N Q I Sbjct: 642 IIVMTSNIGQEI 653
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 39.3 bits (90), Expect = 0.005 Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 6/134 (4%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA + A N FI +S + ++G P R+ D Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLE---------MFVGVGPARVRDLFALARK 397 Query: 199 SNP-VMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD----LSKVVFV 360 + P ++ +DEID G RG+ EQ T N L V D + VV + Sbjct: 398 NAPCILFIDEIDAVGRKRGRGNFGG------QSEQENTLNQ--LLVEMDGFNTTTNVVIL 449 Query: 361 ATANRMQPIPPALL 402 A NR + PALL Sbjct: 450 AGTNRPDILDPALL 463
>CLPB_HELHP (Q7VJY3) Chaperone clpB| Length = 859 Score = 39.3 bits (90), Expect = 0.005 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT A ++A+ L + +RI + ++ + + G Y+G G L Sbjct: 605 FLGPTGVGKTQCAKTLAEFLFDNAKSLVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGVL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R S ++L DE++K DV + LL+VLD + V D S Sbjct: 665 TEAIRRKPYS--IVLFDEVEKAHPDV----FNILLQVLDDGRLTDSK----GVSVDFSNT 714 Query: 352 VFVATAN 372 + + T+N Sbjct: 715 IIILTSN 721 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 10/86 (11%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 P+L +G PGVGKT++ +A+ + N+K I + + + A RG + Sbjct: 202 PIL--LGEPGVGKTAVVEGLAQRIVAKAVPTSLQNKKLIALDMSALIAGAKYRGEFEERL 259 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEI 228 + ++D +K+ N ++ +DEI Sbjct: 260 KN----VVDEVKK--AGNIILFIDEI 279
>CLPB2_SYNP7 (O34209) Chaperone clpB 2| Length = 895 Score = 38.9 bits (89), Expect = 0.006 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L IR + ++ I G YIG G+L Sbjct: 615 FLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLIGAPPGYIGYEEGGQL 674 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DE++K DV + LL+VLD Sbjct: 675 SEAIRRHPYA--VVLFDEVEKAHPDV----FNLLLQVLD 707 Score = 29.6 bits (65), Expect = 3.8 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 12/103 (11%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + R+ I + +G + I G + Y Sbjct: 206 PVL--IGEPGVGKTAIAEGLAQRIVAGEVPDSLKQRRLISLDMGSL-----IAGAK--YR 256 Query: 151 GSMPGRLIDGLKRVSVSN--PVMLLDEIDKTGSDVRGDPASAL 273 G RL L V+ S+ V+ +DE+ G SA+ Sbjct: 257 GEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAM 299
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 38.9 bits (89), Expect = 0.006 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++AK FI I + + D+ + G +++D + S+ Sbjct: 133 GPPGCGKTMLAKALAKESGANFISIRMSSIMDK---------WYGE-SNKIVDAM--FSL 180 Query: 199 SNP----VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL---SKVVF 357 +N ++ +DEID S +R ++ D E T ++ + L +V+ Sbjct: 181 ANKLQPCIIFIDEID---SFLRERSST------DHEVTATLKAEFMTLWDGLLNNGRVMI 231 Query: 358 VATANRMQPIPPALLDRME---VIELPGYTPEEKL 453 + NR+ I A L R+ ++ LPG K+ Sbjct: 232 IGATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKI 266
>CLPB_RHOBA (Q7UM33) Chaperone clpB| Length = 881 Score = 38.9 bits (89), Expect = 0.006 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A+ + +RI + + + G Y+G G+L Sbjct: 626 FLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRLIGAPPGYVGYEEGGKL 685 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+LLDE++K DV + LL+VLD Sbjct: 686 TEAVRRRPYA--VILLDEMEKAHPDV----FNVLLQVLD 718 Score = 29.3 bits (64), Expect = 5.0 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 10/108 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A + +K + + +G + A RG + Sbjct: 203 PVL--IGQPGVGKTAIAEGLALRIFEGDVPQSLKGKKVVSLDMGALVAGAKFRGDFEERL 260 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 294 S+ + D +V ++ +DE+ + ++ +L PE Sbjct: 261 KSVLREVKDSDGKV-----ILFIDELHLVVGAGNAEGSADAANLLKPE 303
>CLPB_XANCP (Q8P6A0) Chaperone clpB| Length = 861 Score = 38.9 bits (89), Expect = 0.006 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++LLDE++K +DV + LL+VLD Sbjct: 663 TEAVRRRPYS--LILLDEVEKAHADV----FNILLQVLD 695
>CLPB_VIBCH (Q9KU18) Chaperone clpB| Length = 857 Score = 38.9 bits (89), Expect = 0.006 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L +R+ + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695
>CLPB_SHIFL (Q7UBW5) Chaperone clpB| Length = 857 Score = 38.9 bits (89), Expect = 0.006 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + R+ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>CLPB_FUSNN (Q8RHQ8) Chaperone clpB| Length = 857 Score = 38.9 bits (89), Expect = 0.006 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L +RI + D+ + G Y+G G+L Sbjct: 604 FLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQL 663 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++ S V+L DEI+K DV + LL+VLD Sbjct: 664 TEAIRTKPYS--VILFDEIEKAHPDV----FNVLLQVLD 696 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 P+L +G PGVGKT++ +A+ + N+K + +G + A Y Sbjct: 200 PIL--IGEPGVGKTAIVEGLAQRILNGDVPESLKNKKIFSLDMGALVAGA-------KYK 250 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228 G R+ LK V SN ++ +DEI Sbjct: 251 GEFEERMKGVLKEVEESNGNIILFIDEI 278
>CLPB_ECOLI (P63284) Chaperone clpB (Heat-shock protein F84.1)| Length = 857 Score = 38.9 bits (89), Expect = 0.006 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + R+ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>CLPB_ECOL6 (P63286) Chaperone clpB| Length = 857 Score = 38.9 bits (89), Expect = 0.006 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + R+ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>CLPB_ECO57 (P63285) Chaperone clpB| Length = 857 Score = 38.9 bits (89), Expect = 0.006 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + R+ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 38.9 bits (89), Expect = 0.006 Identities = 46/146 (31%), Positives = 62/146 (42%), Gaps = 9/146 (6%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS- 195 GPPG GKT LA ++A N FI+I V E R YIG RL+ G+ ++ Sbjct: 192 GPPGTGKTLLAKAVAHETNATFIKI----VASE-----FVRKYIGE-GARLVRGVFELAK 241 Query: 196 -VSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK--VVFVAT 366 S ++ +DEID + S D E +T + S+ V VA Sbjct: 242 EKSPSIIFIDEIDAVAAKRLKSSTSG-----DREVQRTLMQLLAELDGFESRGNVGIVAA 296 Query: 367 ANRMQPIPPALL-----DRMEVIELP 429 NR + PALL DR + LP Sbjct: 297 TNRPDILDPALLRPGRFDRFIEVPLP 322
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 38.9 bits (89), Expect = 0.006 Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 5/133 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + KFIR+S + + YIG R++ L ++ Sbjct: 189 GPPGTGKTLLARAVAHHTDCKFIRVSGAELVQK---------YIGE-GSRMVRELFVMAR 238 Query: 199 SN--PVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVA 363 + ++ +DEID GS V G D E +T + + F+ SK + + Sbjct: 239 EHAPSIIFMDEIDSIGSTRVEGSGGG------DSEVQRTMLELLNQLDGFETSKNIKIIM 292 Query: 364 TANRMQPIPPALL 402 NR+ + PALL Sbjct: 293 ATNRLDILDPALL 305
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.006 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + F+R+ V E + Y+G P +L+ L RV+ Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372 + ++ +DEID G+ R D S + + N L+ V + N Sbjct: 276 EHAPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332 Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456 R++ + PAL+ + IE P P+EK K Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.006 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + F+R+ V E + Y+G P +L+ L RV+ Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372 + ++ +DEID G+ R D S + + N L+ V + N Sbjct: 276 EHAPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332 Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456 R++ + PAL+ + IE P P+EK K Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.006 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + F+R+ V E + Y+G P +L+ L RV+ Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372 + ++ +DEID G+ R D S + + N L+ V + N Sbjct: 276 EHAPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332 Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456 R++ + PAL+ + IE P P+EK K Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.006 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + F+R+ V E + Y+G P +L+ L RV+ Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372 + ++ +DEID G+ R D S + + N L+ V + N Sbjct: 276 EHGPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332 Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456 R++ + PAL+ + IE P P+EK K Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361
>RUVB_RHOPA (P61536) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 38.9 bits (89), Expect = 0.006 Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 2/147 (1%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192 FVGPPG+GKT+LA +A+ L F R + G V +A T + ID + R+ Sbjct: 59 FVGPPGLGKTTLAQIVARELGVGF-RATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 117 Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369 S S +L ++ D + G+ +A +V DLSK V Sbjct: 118 SPSVEEVLYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLSKFTLVGAT 160 Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447 R + L DR + I L YT EE Sbjct: 161 TRAGLLTNPLRDRFGIPIRLNFYTIEE 187
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 38.9 bits (89), Expect = 0.006 Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 9/157 (5%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA ++A F IS + ++G R+ D + Sbjct: 205 VGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE---------MFVGVGASRVRDLFENAK 255 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 + P ++ +DEID G RG A L E+ +T N + + F ++ ++ +A Sbjct: 256 KNAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAA 310 Query: 367 ANRMQPIPPALL-----DRMEVIELPGYT-PEEKLKI 459 NR + PALL DR + P EE LK+ Sbjct: 311 TNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKV 347
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 38.9 bits (89), Expect = 0.006 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 7/154 (4%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + KFIR+S + + YIG R++ L ++ Sbjct: 186 GPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK---------YIGE-GSRMVRELFVMAR 235 Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSKVVFVATA 369 + ++ +DEID GS R D + D E +T + + F+ +K + V A Sbjct: 236 EHAPSIIFMDEIDSIGSS-RSDSSGG---SGDSEVQRTMLELLNQLDGFEATKNIKVIMA 291 Query: 370 -NRMQPIPPALLDRMEV---IELPGYTPEEKLKI 459 NR+ + PALL + IE P + E + +I Sbjct: 292 TNRIDILDPALLRPGRIDRKIEFPPPSAEARAEI 325
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 38.9 bits (89), Expect = 0.006 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 12/140 (8%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + FIR+ V E + Y+G P RL+ + R++ Sbjct: 191 GPPGTGKTMLAKAVAHHTSAAFIRV----VGSE-----FVQKYLGEGP-RLVRDVFRLAR 240 Query: 199 SN--PVMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345 N ++ +DEID +TG+D + L+E+L+ FD+S Sbjct: 241 ENSPAIIFIDEIDAIATKRFDAQTGAD--REVQRILMELLNQMDG-----------FDVS 287 Query: 346 -KVVFVATANRMQPIPPALL 402 V + NR + PALL Sbjct: 288 VNVKVIMATNRQDTLDPALL 307
>CLPB_CLOPE (Q8XKG8) Chaperone clpB| Length = 866 Score = 38.9 bits (89), Expect = 0.006 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A+ L +RI + ++ + + G Y+G G+L Sbjct: 610 FLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGPPPGYVGYEEGGQL 669 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K DV + L++LD Sbjct: 670 TEAVRRNPYS--VILFDEIEKAHDDV----FNLFLQILD 702
>CLPB_NITEU (Q82SD8) Chaperone clpB| Length = 863 Score = 38.9 bits (89), Expect = 0.006 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IR+ + ++ A + G Y+G G L Sbjct: 608 FLGPTGVGKTELCKALAGFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 667 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 668 TEQVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 700
>CLPB_PORGI (Q7MVE7) Chaperone clpB| Length = 863 Score = 38.5 bits (88), Expect = 0.008 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+G GVGKT LA ++A+ L RI + +++ + G Y+G G+L Sbjct: 601 FLGTTGVGKTELARALAELLFDDESMLTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQL 660 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 327 + ++R S V+L DEI+K DV + LL+VLD + H +N Sbjct: 661 TEAIRRKPYS--VVLFDEIEKAHPDV----FNVLLQVLDDGRLTDNKGHVVN 706
>CLPB_AGRT5 (Q7CU92) Chaperone clpB| Length = 874 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L S+A+ L +R+ + ++ A + G Y+G G L Sbjct: 605 FLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGAL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R V+L DEI+K DV + LL+VLD Sbjct: 665 TEAVRRRPYQ--VVLFDEIEKAHPDV----FNVLLQVLD 697 Score = 28.5 bits (62), Expect = 8.6 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 12/109 (11%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A + ++K + + +G + I G + Y Sbjct: 203 PVL--IGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMALDMGAL-----IAGAK--YR 253 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLDP 291 G RL L V N ++ +DE+ + D A +L P Sbjct: 254 GEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLLKP 302
>CLPB1_SYNP7 (P53533) Chaperone clpB 1| Length = 874 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT LA ++A L IRI + ++ + + G Y+G G+L Sbjct: 609 FLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+L DEI+K DV + +L++LD Sbjct: 669 TEAVRRRPYS--VILFDEIEKAHPDV----FNVMLQILD 701 Score = 31.6 bits (70), Expect = 1.0 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++A +A+ + +R+ I + +G + A R Sbjct: 204 PVL--IGEPGVGKTAIAEGLAQRIINGDVPQSLKDRRLIALDMGALIAGAKFR------- 254 Query: 151 GSMPGRLIDGLKRVSVSNPVMLL--DEI 228 G RL LK V+ S +++L DEI Sbjct: 255 GEFEERLKAVLKEVTDSEGIIILFIDEI 282
>CLPB_XANAC (Q8PHQ4) Chaperone clpB| Length = 861 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S ++LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--LILLDEVEKAHPDV----FNILLQVLD 695
>CLPB_YERPE (Q74X11) Chaperone clpB| Length = 857 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695
>CLPB_VIBVY (Q7MNK1) Chaperone clpB| Length = 857 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695
>CLPB_VIBVU (Q8DEV2) Chaperone clpB| Length = 857 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695
>CLPB_VIBPA (Q87S63) Chaperone clpB| Length = 857 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695
>CLPB_PHOPR (Q6LMY0) Chaperone clpB| Length = 857 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + +RI + ++ A + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKTLANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695
>RFCL_PICTO (Q6L0P4) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 410 Score = 38.5 bits (88), Expect = 0.008 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 L G PG GKT+ AT IA LN I ++ DE + +R + M D L Sbjct: 42 LILYGDPGTGKTTTATVIANYLNVPLIEMN---ASDERNADSMKR--VALMSSLYSDLLS 96 Query: 187 RVSVSNPVMLLDEID--------KTGSDVRGDPASALLEVLDPEQNK---TFNDHY 321 + + ++L+DE D K G D G + LL V+ +N T ND+Y Sbjct: 97 ERRIPDRLILIDEADNIFESRDPKRGGDYGG--ITELLNVVKETRNPVIITMNDYY 150
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 38.5 bits (88), Expect = 0.008 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 4/132 (3%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A F IS + ++G R+ D + Sbjct: 233 GPPGTGKTLLAKAVAGEAGVPFYSISGSDFVE---------MFVGVGASRVRDLFENAKK 283 Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV---PFDLSKVVFVAT 366 + P ++ +DEID G RG A L + E+ +T N + + D + V+ +A Sbjct: 284 TAPSIIFIDEIDAVGRQ-RG----AGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAA 338 Query: 367 ANRMQPIPPALL 402 NR + PALL Sbjct: 339 TNRSDVLDPALL 350
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 38.5 bits (88), Expect = 0.008 Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 7/146 (4%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A N FI + + G R + L + KR + Sbjct: 175 GPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGAR------IVRELFEMAKRKAP 228 Query: 199 SNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATAN 372 S ++ +DEID G+ S E+ +T + FD L V +A N Sbjct: 229 S--IIFIDEIDAIGAKRIDIGTSGEREI-----QRTLMQLLAELDGFDPLDNVKIIAATN 281 Query: 373 RMQPIPPALL-----DRMEVIELPGY 435 R+ + PALL DR+ + LP + Sbjct: 282 RIDILDPALLRPGRFDRIIEVPLPDF 307
>CLPB_CHLCV (Q822Q4) Chaperone clpB| Length = 864 Score = 38.5 bits (88), Expect = 0.008 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 7/102 (6%) Frame = +1 Query: 4 VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162 V F+GP GVGKT LA ++A L K +R + ++ + G Y+G Sbjct: 600 VFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEG 659 Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 G L + L+R S V+L DEI+K +V + LL++ D Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----FNILLQIFD 695
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 38.1 bits (87), Expect = 0.011 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 3/132 (2%) Frame = +1 Query: 16 VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195 VGPPG GKT LA +IA F + G DE +G R+ D + Sbjct: 240 VGPPGTGKTLLARAIAGEAQVPFFH-TAGSEFDE--------VLVGQGARRVRDLFDKAK 290 Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366 P ++ +DEID GS + + P N+T N + F ++ ++ +A Sbjct: 291 ARAPCIIFIDEIDSVGS-------KRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAA 343 Query: 367 ANRMQPIPPALL 402 NR+ + ALL Sbjct: 344 TNRVDDLDKALL 355
>CLP_TRYBB (P31543) Heat shock protein 100 (CLP protein)| Length = 868 Score = 38.1 bits (87), Expect = 0.011 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L + +RI + ++ + G YIG G+L Sbjct: 601 FLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHDEGGQL 660 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R + V+L DE++K +V + LL+VLD + + D S Sbjct: 661 TEPVRR--RPHAVVLFDEVEKAHPNV----YNVLLQVLDDGRLTDSRGRTV----DFSNT 710 Query: 352 VFVATAN 372 + V T+N Sbjct: 711 IIVMTSN 717 Score = 31.2 bits (69), Expect = 1.3 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAK----------ALNRKFIRISLGGVKDEADIRGHRRTYI 150 P+L +G PGVGKT++A IA+ LN + + LG + + +RG + Sbjct: 200 PIL--IGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLFSLDLGALIAGSSLRGEFEERL 257 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEI 228 S+ + + S + ++ +DEI Sbjct: 258 KSVLNEV-----KESSNGVILFIDEI 278
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 38.1 bits (87), Expect = 0.011 Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 11/139 (7%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A FIR+ V E + Y+G P + D + Sbjct: 202 GPPGCGKTMLAKAVAANTAASFIRV----VGSE-----FVQKYLGEGPRMVRDVFRLAKE 252 Query: 199 SNP-VMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS- 345 ++P ++ +DEID +TG+D + LLE+L+ FD S Sbjct: 253 NSPSIIFIDEIDAIATKRFDAQTGAD--REVQRILLELLNQMDG-----------FDQST 299 Query: 346 KVVFVATANRMQPIPPALL 402 V + NR + PALL Sbjct: 300 NVKVIMATNRQDTLDPALL 318
>CLPB_BDEBA (Q6MIV0) Chaperone clpB| Length = 855 Score = 38.1 bits (87), Expect = 0.011 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT ++A+ L + +RI + ++ + + G Y+G G+L Sbjct: 605 FLGPTGVGKTETVKALAEFLFDDEQAVVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 664 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 665 TESVRRRPYS--VVLLDEVEKAHPDV----FNILLQVLD 697 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVK-----DEADIRGHRRTYIGSMPG 165 PVL +G PGVGKT++A +A + ++ + +L G K A I G + Y G Sbjct: 198 PVL--IGEPGVGKTAIAEGLALRIIKQDVPDNLIGKKLMSLDMGALIAGAK--YRGEFED 253 Query: 166 RLIDGLKRVSVSNP--VMLLDEI 228 RL +K V+ S+ ++ +DE+ Sbjct: 254 RLKAVIKEVTSSDGQIILFIDEL 276
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 38.1 bits (87), Expect = 0.011 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 13/160 (8%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT +A + A N F++++ + + +IG + D Sbjct: 207 GPPGTGKTLMARACAAQTNATFLKLAGPQLV---------QMFIGDGAKLVRDAFLLAKE 257 Query: 199 SNP-VMLLDEIDKTG-----SDVRGD--PASALLEVLDPEQNKTFNDHYLNVPFDLSKVV 354 +P ++ +DEID G S+V GD +LE+L+ + +D ++ Sbjct: 258 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD----------RIK 307 Query: 355 FVATANRMQPIPPAL-----LDRMEVIELPGYTPEEKLKI 459 +A NR + PAL LDR IE P T E + +I Sbjct: 308 VIAATNRADILDPALMRSGRLDRK--IEFPHPTEEARGRI 345
>CLPB_NEIMB (Q9JYQ8) Chaperone clpB| Length = 859 Score = 38.1 bits (87), Expect = 0.011 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 607 FLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 667 TEQVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 699
>CLPB_NEIMA (Q9JTP9) Chaperone clpB| Length = 859 Score = 38.1 bits (87), Expect = 0.011 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L IRI + ++ A + G Y+G G L Sbjct: 607 FLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYL 666 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 667 TEQVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 699
>CLPB_SALTY (Q7CQ01) Chaperone clpB| Length = 857 Score = 38.1 bits (87), Expect = 0.011 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + R+ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>CLPB_SALTI (Q7AMH5) Chaperone clpB| Length = 857 Score = 38.1 bits (87), Expect = 0.011 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A + + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R S V+LLDE++K DV + LL+VLD Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + R+ + + +G + A RG + Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256 Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291 + G L D K+ N ++ +DE+ + D A +L P Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301
>CLPB_PROMM (Q7V8B1) Chaperone clpB| Length = 865 Score = 38.1 bits (87), Expect = 0.011 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L+ ++A L +RI + ++ + G Y+G G+L Sbjct: 609 FLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLIGAPPGYVGYEAGGQL 668 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 + ++R + V+L DE++K DV + +L++LD Sbjct: 669 TEAVRRRPYA--VILFDEVEKAHQDV----FNVMLQILD 701 Score = 32.3 bits (72), Expect = 0.59 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +1 Query: 1 PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150 PVL +G PGVGKT++ +A+ + NR+ I + +G + I G + Y Sbjct: 203 PVL--IGEPGVGKTAIVEGLAQRIVNGDVPAALQNRQLITLDMGAL-----IAGAK--YR 253 Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228 G RL LK V+ S V+ +DEI Sbjct: 254 GEFEERLKAVLKEVTASEGQIVLFIDEI 281
>CLPB_TREPA (O83110) Chaperone clpB| Length = 878 Score = 38.1 bits (87), Expect = 0.011 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPG 165 LC VGP GVGKT LA ++A L R RI + ++ I G Y+G G Sbjct: 606 LC-VGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGYDEGG 664 Query: 166 RLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288 +L + ++R S V+L DE++K DV + L++LD Sbjct: 665 QLTEAVRRRPYS--VLLFDEVEKAHQDV----FNIFLQILD 699
>CLPB_BRUME (Q8YJ91) Chaperone clpB| Length = 874 Score = 38.1 bits (87), Expect = 0.011 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%) Frame = +1 Query: 13 FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171 F+GP GVGKT L ++A L + +RI + ++ + G Y+G G L Sbjct: 603 FLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVL 662 Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351 + ++R V+L DEI+K DV + LL+VLD + H + D Sbjct: 663 TEAVRRRPYQ--VILFDEIEKAHPDV----FNVLLQVLDDGRLTDGQGHTV----DFRNT 712 Query: 352 VFVATAN 372 V + T+N Sbjct: 713 VIIMTSN 719
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 38.1 bits (87), Expect = 0.011 Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 16/161 (9%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHR--RTYIGSMPGRLIDGLKRV 192 GPPG GKT +A ++A N FI +RG + ++G + ++ Sbjct: 503 GPPGTGKTLMAKAVANETNANFI-----------SVRGPQLLSKWVGESEKAIRQTFRKA 551 Query: 193 -SVSNPVMLLDEIDKT--------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345 V+ V+ DE+D G++V + LL LD + ++ Sbjct: 552 RQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLE-------------EME 598 Query: 346 KVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453 +V+ +A NR I PAL+ DR+ + PG E++ Sbjct: 599 EVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQI 639 Score = 35.0 bits (79), Expect = 0.092 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 8/135 (5%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A + F I+ + + Y G +L + + Sbjct: 230 GPPGTGKTLLAKAVANETSASFFSIAGPEIISK---------YYGESEQQLREIFEDAKD 280 Query: 199 SNP-VMLLDEIDKTG---SDVRGD----PASALLEVLDPEQNKTFNDHYLNVPFDLSKVV 354 +P ++ +DE+D DV G+ + LL ++D + + +V+ Sbjct: 281 DSPSIIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLEGR-------------GQVI 327 Query: 355 FVATANRMQPIPPAL 399 +A NR+ + PAL Sbjct: 328 VIAATNRVDAVDPAL 342
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 37.7 bits (86), Expect = 0.014 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 10/138 (7%) Frame = +1 Query: 19 GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198 GPPG GKT LA ++A FIR+ V E + Y+G P + D + Sbjct: 203 GPPGCGKTMLANAVAHHTTAAFIRV----VGSE-----FVQKYLGEGPRMVRDVFRLAKE 253 Query: 199 SNP-VMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 348 ++P ++ +DEID +TG+D + LLE+L+ Q F+ + Sbjct: 254 NSPAIIFIDEIDAIATKRFDAQTGAD--REVQRILLELLN--QMDGFD--------QTTN 301 Query: 349 VVFVATANRMQPIPPALL 402 V + NR + PALL Sbjct: 302 VKVIMATNRADTLDPALL 319
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 37.7 bits (86), Expect = 0.014 Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 12/161 (7%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 + GPPG GKT +A +IA + F +S + + RG + RL+ L Sbjct: 229 MVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSK--WRGDSEKIV-----RLLFELA 281 Query: 187 RVSVSNPVMLLDEIDKTGSDVRGDPA---------SALLEVLDPEQNKTFNDHYLNVPFD 339 R + ++ +DEID G RG+ S L +D QNK FD Sbjct: 282 RFYAPS-IIFIDEIDTLGGQ-RGNSGEHEASRRVKSEFLVQMDGSQNK----------FD 329 Query: 340 LSKVVFVATANRMQPIPPALLDRME---VIELPGYTPEEKL 453 +V +A N + AL R E I LP +KL Sbjct: 330 SRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKL 370
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 37.7 bits (86), Expect = 0.014 Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 16/167 (9%) Frame = +1 Query: 7 LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186 L GPPG GKTSL ++ + + I +S V R + G L + Sbjct: 59 LLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSV---------HRAHAGESEKVLREAFA 109 Query: 187 R-----VSVSNPVMLLDEID--------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 327 VS V+ +DEID + DVR AS L ++D + + Sbjct: 110 EASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVR--IASQLFTLMDSNKPSS------- 160 Query: 328 VPFDLSKVVFVATANRMQPIPPAL--LDRME-VIELPGYTPEEKLKI 459 +VV VA+ NR+ I PAL R + ++E+ E++LKI Sbjct: 161 ---SAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKI 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,774,486 Number of Sequences: 219361 Number of extensions: 1327431 Number of successful extensions: 7004 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 6543 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6944 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
