ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdg05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precu... 299 2e-81
2LONH1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precu... 286 2e-77
3LONH1_ARATH (O64948) Lon protease homolog 1, mitochondrial precu... 284 7e-77
4LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53) 234 1e-61
5LON1_MYXXA (P36773) ATP-dependent protease La 1 (EC 3.4.21.53) 226 2e-59
6LON_ERWAM (P46067) ATP-dependent protease La (EC 3.4.21.53) 221 5e-58
7LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53) 221 7e-58
8LON_ECOLI (P0A9M0) ATP-dependent protease La (EC 3.4.21.53) 220 2e-57
9LON_ECOL6 (P0A9M1) ATP-dependent protease La (EC 3.4.21.53) 220 2e-57
10LON_VIBPA (P74956) ATP-dependent protease La (EC 3.4.21.53) 220 2e-57
11LON_BRUSU (Q8G0I7) ATP-dependent protease La (EC 3.4.21.53) 219 3e-57
12LON_BRUAB (P0C113) ATP-dependent protease La (EC 3.4.21.53) 219 3e-57
13LON_BRUA2 (Q2YPX3) ATP-dependent protease La (EC 3.4.21.53) 219 3e-57
14LON_HAEIN (P43864) ATP-dependent protease La (EC 3.4.21.53) 218 4e-57
15LON_CAUCR (P52977) ATP-dependent protease La (EC 3.4.21.53) 218 4e-57
16LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53) 218 6e-57
17LON_BRUME (Q8YHC6) ATP-dependent protease La (EC 3.4.21.53) 217 1e-56
18LON_BRECH (P36772) ATP-dependent protease La (EC 3.4.21.53) 216 2e-56
19LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53) 213 1e-55
20LON_BUCAP (Q8K988) ATP-dependent protease La (EC 3.4.21.53) 211 9e-55
21LON_BUCAI (P57549) ATP-dependent protease La (EC 3.4.21.53) 211 9e-55
22LON_AQUAE (O66605) ATP-dependent protease La (EC 3.4.21.53) 210 1e-54
23LON_BUCBP (Q89A99) ATP-dependent protease La (EC 3.4.21.53) 210 2e-54
24LON_RICPR (Q9ZD92) ATP-dependent protease La (EC 3.4.21.53) 209 2e-54
25LON_CHLMU (Q9PK50) ATP-dependent protease La (EC 3.4.21.53) 208 5e-54
26LON_CHLTR (O84348) ATP-dependent protease La (EC 3.4.21.53) 208 6e-54
27LON_MYCSM (O31147) ATP-dependent protease La (EC 3.4.21.53) 208 6e-54
28LONM_YEAST (P36775) Lon protease homolog, mitochondrial precurso... 207 1e-53
29LON_CHLPN (Q9Z9F4) ATP-dependent protease La (EC 3.4.21.53) 204 7e-53
30LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53) 204 9e-53
31LON_MYCPN (P78025) ATP-dependent protease La (EC 3.4.21.53) 204 1e-52
32LON2_BORBU (O51558) ATP-dependent protease La homolog (EC 3.4.21.-) 203 2e-52
33LON_HELPY (P55995) ATP-dependent protease La (EC 3.4.21.53) 202 3e-52
34LON_HELPJ (Q9ZJL3) ATP-dependent protease La (EC 3.4.21.53) 201 6e-52
35LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial... 201 7e-52
36LON_TREPA (O83536) ATP-dependent protease La (EC 3.4.21.53) 201 7e-52
37LONM_HUMAN (P36776) Lon protease homolog, mitochondrial precurso... 198 5e-51
38LONH2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precu... 198 6e-51
39LONM_CAEEL (O44952) Lon protease homolog, mitochondrial precurso... 197 8e-51
40LONH2_ARATH (P93655) Lon protease homolog 2, mitochondrial precu... 196 2e-50
41LON_CAMJE (O69300) ATP-dependent protease La (EC 3.4.21.53) 193 2e-49
42LONH3_ARATH (Q9M9L8) Putative Lon protease homolog 3, mitochondr... 192 3e-49
43LONH4_ARATH (Q9M9L7) Putative Lon protease homolog 4, mitochondr... 191 1e-48
44LON1_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53) 188 6e-48
45LONH_MIMIV (Q5UPT0) Lon protease homolog (EC 3.4.21.-) 100 2e-21
46CLPB_MYCPE (Q8EW28) Chaperone clpB 47 2e-05
47CLPB_STAES (Q8CPT5) Chaperone clpB 47 3e-05
48CLPB_STAEQ (Q5HQI5) Chaperone clpB 47 3e-05
49CLPA_ECOLI (P0ABH9) ATP-dependent Clp protease ATP-binding subun... 46 4e-05
50CLPA_ECOL6 (P0ABI0) ATP-dependent Clp protease ATP-binding subun... 46 4e-05
51CLPA_ECO57 (P0ABI1) ATP-dependent Clp protease ATP-binding subun... 46 4e-05
52PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom... 46 5e-05
53CLPB2_SYNY3 (P74361) Chaperone clpB 2 46 5e-05
54FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-) 45 7e-05
55CLPB_STAAW (Q8NXE7) Chaperone clpB 45 7e-05
56CLPB_STAAS (Q6GAV1) Chaperone clpB 45 7e-05
57CLPB_STAAR (Q6GIB2) Chaperone clpB 45 7e-05
58CLPB_STAAN (Q7A6G6) Chaperone clpB 45 7e-05
59CLPB_STAAM (Q99VB5) Chaperone clpB 45 7e-05
60CLPB_STAAC (Q5HHB0) Chaperone clpB 45 7e-05
61FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-) 45 7e-05
62CLPB_MYCTU (P63288) Chaperone clpB 45 9e-05
63CLPB_MYCBO (P63287) Chaperone clpB 45 9e-05
64CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2 44 2e-04
65CLPB_MYCLE (Q9CB26) Chaperone clpB 44 2e-04
66PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1... 44 2e-04
67CLPA_RHOBL (P05444) ClpA homolog protein 44 2e-04
68CLPB_PSESM (Q889C2) Chaperone clpB 44 2e-04
69CLPB_PROMA (Q7VBL0) Chaperone clpB 44 2e-04
70CLPB_MEIRU (Q7X2S8) Chaperone clpB 44 3e-04
71RUVB_CAUCR (Q9A3G8) Holliday junction ATP-dependent DNA helicase... 44 3e-04
72PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote... 44 3e-04
73PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote... 44 3e-04
74PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote... 44 3e-04
75CLPB_DESVH (Q72AW6) Chaperone clpB 44 3e-04
76FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-) 44 3e-04
77FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-) 44 3e-04
78FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-) 44 3e-04
79FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-) 44 3e-04
80FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-) 44 3e-04
81CLPB_CORGL (P53532) Chaperone clpB 44 3e-04
82CLPB2_STRAW (Q826F2) Chaperone clpB 2 44 3e-04
83CLPB_HELPJ (Q9ZMH1) Chaperone clpB 43 3e-04
84CLPB_AQUAE (O67588) Chaperone clpB 43 3e-04
85CLPB_YEREN (Q9F746) Chaperone clpB 43 3e-04
86CLPB_BIFLO (Q8G4X4) Chaperone clpB 43 3e-04
87CLPB_WOLSU (Q7M9X4) Chaperone clpB 43 3e-04
88CLPB_MYCPA (Q73T66) Chaperone clpB 43 4e-04
89CLPB_MYCGA (Q7NAZ3) Chaperone clpB 43 4e-04
90CLPB_MYCGE (P47597) Chaperone clpB 43 4e-04
91FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-) 43 4e-04
92CLPB_THET8 (Q9RA63) Chaperone clpB 43 4e-04
93CLPB_THET2 (Q72IK9) Chaperone clpB 43 4e-04
94CLPB_PSEPK (Q88Q71) Chaperone clpB 42 6e-04
95CLPB_BACNO (P17422) Chaperone clpB 42 6e-04
96AMIB_PSEAE (Q51416) ATP-dependent protease ATP-binding subunit-l... 42 6e-04
97CLPB_HELPY (P71404) Chaperone clpB 42 6e-04
98CLPB_LACLC (O68185) Chaperone clpB 42 7e-04
99CLPB_LACLA (Q9CFF3) Chaperone clpB 42 7e-04
100CLPB_BACCR (Q81GM5) Chaperone clpB 42 7e-04
101CLPB_BACC1 (Q73BY1) Chaperone clpB 42 7e-04
102CLPB_BACAN (Q81TT4) Chaperone clpB 42 7e-04
103CLPB_HUMAN (Q9H078) Caseinolytic peptidase B protein homolog (Su... 42 7e-04
104PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso... 42 7e-04
105FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2... 42 7e-04
106CLPB_PSEAE (Q9HVN5) Chaperone clpB 42 7e-04
107RFCL_SULAC (Q4JAB1) Replication factor C large subunit (RFC larg... 42 7e-04
108CLPB_RAT (Q9WTT2) Caseinolytic peptidase B protein homolog (Supp... 42 7e-04
109CLPB_MOUSE (Q60649) Caseinolytic peptidase B protein homolog (Su... 42 7e-04
110CLPB_PARUW (Q6MD97) Chaperone clpB 42 0.001
111PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub... 42 0.001
112FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.... 42 0.001
113CLPB1_STRAW (Q82EU9) Chaperone clpB 1 42 0.001
114CLPE_LACLC (Q9S5Z2) ATP-dependent Clp protease ATP-binding subun... 42 0.001
115CLPE_LACLA (Q9CI09) ATP-dependent Clp protease ATP-binding subun... 42 0.001
116CLPB_PROMP (Q7V2A3) Chaperone clpB 42 0.001
117RUVB_RHIET (Q9L9C3) Holliday junction DNA helicase ruvB 42 0.001
118CLPB_CLOAB (Q97KG0) Chaperone clpB 42 0.001
119CLPC_BACSU (P37571) Negative regulator of genetic competence clp... 42 0.001
120CLPB_CORDI (Q6NF05) Chaperone clpB 42 0.001
121PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso... 42 0.001
122PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso... 42 0.001
123PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso... 42 0.001
124FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.... 41 0.001
125CLPB_PROFR (Q7WSY8) Chaperone clpB (Fragment) 41 0.001
126CLPB_LACPL (Q88VX7) Chaperone clpB 41 0.001
127CLPB_HAEIN (P44403) Chaperone clpB 41 0.001
128FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2... 41 0.001
129CLPB_TROW8 (Q83N78) Chaperone clpB 41 0.001
130CLPB_STRCO (Q8CJV9) Chaperone clpB 41 0.001
131PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4 41 0.001
132CLPB1_CHLTE (Q8KG79) Probable chaperone clpB 1 41 0.001
133CLPB_STRAL (Q9Z6E4) Chaperone clpB 41 0.001
134FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2... 41 0.001
135CLPB_TROWT (Q83FI1) Chaperone clpB 41 0.001
136CLPB_ENTFA (Q831Y7) Chaperone clpB 41 0.002
137CLPB1_ANASP (Q8YUL9) Chaperone clpB 1 41 0.002
138CLPB_CHRVO (Q7NWN7) Chaperone clpB 41 0.002
139CLPB2_SYNEL (Q8DG71) Chaperone clpB 2 41 0.002
140YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46 41 0.002
141RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC larg... 41 0.002
142FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2... 41 0.002
143CLPB_CLOTE (Q898C7) Chaperone clpB 41 0.002
144FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.... 41 0.002
145CLPB_GLOVI (Q7NFE9) Chaperone clpB 41 0.002
146CLPB_CHLPN (Q7AJA9) Chaperone clpB 41 0.002
147CLPB_DEIRA (Q9RVI3) Chaperone clpB 40 0.002
148CLPB_COREF (Q8FM94) Chaperone clpB 40 0.002
149PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ... 40 0.002
150CLPB_HAEDU (Q7VNH1) Chaperone clpB 40 0.002
151RUVB_BRUSU (Q8FZ02) Holliday junction ATP-dependent DNA helicase... 40 0.002
152RUVB_BRUME (Q8YIV5) Holliday junction ATP-dependent DNA helicase... 40 0.002
153RUVB_BRUAB (Q57BH8) Holliday junction ATP-dependent DNA helicase... 40 0.002
154RUVB_BRUA2 (Q2YRD2) Holliday junction ATP-dependent DNA helicase... 40 0.002
155RUVB_AGRT5 (Q8U9K6) Holliday junction ATP-dependent DNA helicase... 40 0.002
156RUVB_BARQU (Q6FYP6) Holliday junction ATP-dependent DNA helicase... 40 0.002
157CLPB_BORPE (Q7VYV6) Chaperone clpB 40 0.002
158CLPB_BORPA (Q7W9E6) Chaperone clpB 40 0.002
159CLPB_BORBR (Q7WHB6) Chaperone clpB 40 0.002
160CLPB_SHEON (Q8EBE6) Chaperone clpB 40 0.002
161CLPB_WOLPM (Q73IE4) Chaperone clpB 40 0.003
162CLPB_BLOFL (Q7VQF3) Chaperone clpB 40 0.003
163CLPB_LISMO (Q8Y570) Chaperone clpB 40 0.003
164CLPB_LISIN (Q929G7) Chaperone clpB 40 0.003
165FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2... 40 0.003
166RUVB_RHIME (Q92M92) Holliday junction ATP-dependent DNA helicase... 40 0.003
167CLPB_MYCPN (P75247) Chaperone clpB 40 0.003
168FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2... 40 0.003
169CLPB_PHOLL (Q7N788) Chaperone clpB 40 0.003
170CLPB_CAMJE (Q9PI02) Chaperone clpB 40 0.003
171CLPB_COXBU (Q83F55) Chaperone clpB 40 0.003
172CLPB_PLEBO (O87444) Chaperone clpB 40 0.004
173FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2... 40 0.004
174CLPB1_SYNY3 (P74459) Chaperone clpB 1 40 0.004
175CLPB_STRMU (Q8DTC7) Chaperone clpB 40 0.004
176RUVB_BARHE (Q6G5R1) Holliday junction ATP-dependent DNA helicase... 40 0.004
177FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2... 40 0.004
178CLPB_GEOSL (Q74FF1) Chaperone clpB 40 0.004
179Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156 40 0.004
180CLPB_CHLTR (O84115) Chaperone clpB 40 0.004
181CLPB_CHLMU (Q9PKS5) Chaperone clpB 40 0.004
182RFCL_SULTO (Q975D4) Replication factor C large subunit (RFC larg... 40 0.004
183FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2... 40 0.004
184CLPB_LISMF (Q71XF9) Chaperone clpB 40 0.004
185FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2... 39 0.005
186AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg... 39 0.005
187FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2... 39 0.005
188FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2... 39 0.005
189FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2... 39 0.005
190PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog 39 0.005
191PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4) 39 0.005
192CLPB_PASMU (Q9CKC0) Chaperone clpB 39 0.005
193CLPB_RALSO (Q8XZR0) Chaperone clpB 39 0.005
194PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso... 39 0.005
195CLPB_XYLFT (Q87AX8) Chaperone clpB 39 0.005
196CLPB_XYLFA (Q9PGC1) Chaperone clpB 39 0.005
197HSP78_CANAL (Q96UX5) Heat shock protein 78, mitochondrial precursor 39 0.005
198AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-) 39 0.005
199CLPB_HELHP (Q7VJY3) Chaperone clpB 39 0.005
200CLPB2_SYNP7 (O34209) Chaperone clpB 2 39 0.006
201MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4) 39 0.006
202CLPB_RHOBA (Q7UM33) Chaperone clpB 39 0.006
203CLPB_XANCP (Q8P6A0) Chaperone clpB 39 0.006
204CLPB_VIBCH (Q9KU18) Chaperone clpB 39 0.006
205CLPB_SHIFL (Q7UBW5) Chaperone clpB 39 0.006
206CLPB_FUSNN (Q8RHQ8) Chaperone clpB 39 0.006
207CLPB_ECOLI (P63284) Chaperone clpB (Heat-shock protein F84.1) 39 0.006
208CLPB_ECOL6 (P63286) Chaperone clpB 39 0.006
209CLPB_ECO57 (P63285) Chaperone clpB 39 0.006
210PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso... 39 0.006
211PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S... 39 0.006
212PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro... 39 0.006
213PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P... 39 0.006
214PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P... 39 0.006
215PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P... 39 0.006
216RUVB_RHOPA (P61536) Holliday junction ATP-dependent DNA helicase... 39 0.006
217FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2... 39 0.006
218PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P... 39 0.006
219PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ... 39 0.006
220CLPB_CLOPE (Q8XKG8) Chaperone clpB 39 0.006
221CLPB_NITEU (Q82SD8) Chaperone clpB 39 0.006
222CLPB_PORGI (Q7MVE7) Chaperone clpB 39 0.008
223CLPB_AGRT5 (Q7CU92) Chaperone clpB 39 0.008
224CLPB1_SYNP7 (P53533) Chaperone clpB 1 39 0.008
225CLPB_XANAC (Q8PHQ4) Chaperone clpB 39 0.008
226CLPB_YERPE (Q74X11) Chaperone clpB 39 0.008
227CLPB_VIBVY (Q7MNK1) Chaperone clpB 39 0.008
228CLPB_VIBVU (Q8DEV2) Chaperone clpB 39 0.008
229CLPB_VIBPA (Q87S63) Chaperone clpB 39 0.008
230CLPB_PHOPR (Q6LMY0) Chaperone clpB 39 0.008
231RFCL_PICTO (Q6L0P4) Replication factor C large subunit (RFC larg... 39 0.008
232FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2... 39 0.008
233PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso... 39 0.008
234CLPB_CHLCV (Q822Q4) Chaperone clpB 39 0.008
235YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-) 38 0.011
236CLP_TRYBB (P31543) Heat shock protein 100 (CLP protein) 38 0.011
237PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B 38 0.011
238CLPB_BDEBA (Q6MIV0) Chaperone clpB 38 0.011
239PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ... 38 0.011
240CLPB_NEIMB (Q9JYQ8) Chaperone clpB 38 0.011
241CLPB_NEIMA (Q9JTP9) Chaperone clpB 38 0.011
242CLPB_SALTY (Q7CQ01) Chaperone clpB 38 0.011
243CLPB_SALTI (Q7AMH5) Chaperone clpB 38 0.011
244CLPB_PROMM (Q7V8B1) Chaperone clpB 38 0.011
245CLPB_TREPA (O83110) Chaperone clpB 38 0.011
246CLPB_BRUME (Q8YJ91) Chaperone clpB 38 0.011
247CDCH_HALSA (Q9HPF0) Protein cdcH 38 0.011
248PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ... 38 0.014
249MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ... 38 0.014
250CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ... 38 0.014
251CLPB_RHILO (Q98G96) Chaperone clpB 38 0.014
252HS101_ORYSA (Q6F2Y7) Heat shock protein 101 38 0.014
253CLPB_BACTN (Q89YY3) Chaperone clpB 38 0.014
254CLPB_OCEIH (Q8EU05) Chaperone clpB 38 0.014
255CLPC_MYCTU (P0A522) Probable ATP-dependent Clp protease ATP-bind... 38 0.014
256CLPC_MYCLE (P24428) Probable ATP-dependent Clp protease ATP-bind... 38 0.014
257CLPC_MYCBO (P0A523) Probable ATP-dependent Clp protease ATP-bind... 38 0.014
258SAV_SULAC (Q07590) SAV protein 38 0.014
259CLPX_ENTFA (Q833M7) ATP-dependent Clp protease ATP-binding subun... 38 0.014
260FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2... 38 0.014
261PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ... 38 0.014
262FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2... 38 0.014
263CLPB_RHIME (Q92MK7) Chaperone clpB 37 0.018
264RUVB_RHILO (Q98F76) Holliday junction ATP-dependent DNA helicase... 37 0.018
265PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ... 37 0.018
266CLPB1_SYNPX (Q7U637) Chaperone clpB 1 37 0.018
267FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.... 37 0.018
268RUVB_BRAJA (Q89U80) Holliday junction ATP-dependent DNA helicase... 37 0.018
269HLYB_TREHY (Q54316) Hemolysin B 37 0.018
270FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2... 37 0.018
271FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2... 37 0.018
272CLPB_TREDE (Q73K92) Chaperone clpB 37 0.018
273PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A 37 0.018
274FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2... 37 0.018
275Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297 37 0.018
276HSP78_YEAST (P33416) Heat shock protein 78, mitochondrial precursor 37 0.024
277CLPB_RHOPA (Q6N1H2) Chaperone clpB 37 0.024
278PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi... 37 0.024
279PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)... 37 0.024
280PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)... 37 0.024
281PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T... 37 0.024
282HSLU_BACSK (Q5WFQ1) ATP-dependent hsl protease ATP-binding subun... 37 0.024
283CHL12_EMENI (P0C1D3) Protein CHL12 37 0.024
284HSP98_NEUCR (P31540) Heat shock protein HSP98 37 0.024
285FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2... 37 0.024
286CLPB2_ANASP (Q8YM56) Chaperone clpB 2 37 0.024
287PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso... 37 0.024
288Y2559_MYCTU (Q50739) Hypothetical protein Rv2559c/MT2636 37 0.024
289PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin... 37 0.024
290CFXQ_PORPU (P51228) Protein cfxQ homolog 37 0.024
291CLPC_ODOSI (P49574) ATP-dependent Clp protease ATP-binding subun... 37 0.031
292RUVB_TROWT (Q83MZ8) Holliday junction ATP-dependent DNA helicase... 37 0.031
293RUVB_TROW8 (Q83HN0) Holliday junction ATP-dependent DNA helicase... 37 0.031
294CLPB_BRAJA (Q89UL2) Chaperone clpB 37 0.031
295RUVB_CLOPE (Q8XJ14) Holliday junction ATP-dependent DNA helicase... 37 0.031
296PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T... 37 0.031
297CLPB1_SYNEL (Q8DJ40) Chaperone clpB 1 37 0.031
298PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ... 37 0.031
299PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso... 37 0.031
300MDN1_HUMAN (Q9NU22) Midasin (MIDAS-containing protein) 37 0.031
301CDC48_YEAST (P25694) Cell division control protein 48 37 0.031
302MDN1_GIALA (Q8T5T1) Midasin (MIDAS-containing protein) 37 0.031
303CLPB_BRUSU (Q7CEG6) Chaperone clpB 37 0.031
304RUVB_EHRCJ (Q3YRD9) Holliday junction ATP-dependent DNA helicase... 37 0.031
305CFXQ2_CYACA (O22034) Protein cfxQ homolog 37 0.031
306RUVB_NITWN (Q3SP14) Holliday junction ATP-dependent DNA helicase... 36 0.041
307PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog 36 0.041
308CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48 36 0.041
309PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ... 36 0.041
310PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4 36 0.041
311PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog 36 0.041
312HS101_ARATH (P42730) Heat shock protein 101 36 0.041
313CLPB_CAUCR (Q9A9T4) Chaperone clpB 36 0.041
314AFG2_YEAST (P32794) Protein AFG2 36 0.041
315CFXQ1_CYACA (Q9TLY2) Protein cfxQ homolog 36 0.041
316FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.... 36 0.041
317MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein) 36 0.041
318CLPX_BACHD (Q9K8F4) ATP-dependent Clp protease ATP-binding subun... 36 0.041
319RFCL_SULSO (Q9UXF6) Replication factor C large subunit (RFC larg... 36 0.041
320PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo... 36 0.054
321HS104_YEAST (P31539) Heat shock protein 104 36 0.054
322RFCL_METJA (Q58294) Replication factor C large subunit (RFC larg... 36 0.054
323HSLU_ENTFA (Q834K4) ATP-dependent hsl protease ATP-binding subun... 36 0.054
324AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-) 36 0.054
325KAD_AQUAE (O66490) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 36 0.054
326CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ... 35 0.070
327RUVB2_SYNJA (Q2JTJ1) Holliday junction ATP-dependent DNA helicas... 35 0.070
328RUVB_CLOAB (Q97GT1) Holliday junction ATP-dependent DNA helicase... 35 0.070
329PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso... 35 0.070
330PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso... 35 0.070
331PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote... 35 0.070
332PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6) 35 0.070
333CLPB_RICPR (Q9ZEA9) Chaperone clpB 35 0.070
334RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7 35 0.092
335RUVB_RICFE (Q4ULW6) Holliday junction ATP-dependent DNA helicase... 35 0.092
336CLPB_LEPIN (Q8F509) Chaperone clpB 35 0.092
337Y2537_MYCLE (Q9CD28) Hypothetical protein ML2537 35 0.092
338Y1189_COXBU (P39918) Hypothetical protein CBU1189 35 0.092
339RFC1_HUMAN (P35251) Activator 1 140 kDa subunit (Replication fac... 35 0.092
340PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi... 35 0.092
341CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val... 35 0.092
342Y1590_HAEIN (P45262) Hypothetical protein HI1590 35 0.092
343RUVB_SYNJB (Q2JP68) Holliday junction ATP-dependent DNA helicase... 35 0.092
344RUVB1_SYNJA (Q2JTM7) Holliday junction ATP-dependent DNA helicas... 35 0.092
345HSLU_OCEIH (Q8CXH1) ATP-dependent hsl protease ATP-binding subun... 35 0.092
346HSLU_BACHD (Q9KA27) ATP-dependent hsl protease ATP-binding subun... 35 0.092
347VAT_THEAC (O05209) VCP-like ATPase 35 0.092
348PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso... 35 0.092
349CLPX_LISMO (Q8Y7K9) ATP-dependent Clp protease ATP-binding subun... 35 0.092
350CLPX_LISMF (Q720F3) ATP-dependent Clp protease ATP-binding subun... 35 0.092
351CLPX_LISIN (Q92C84) ATP-dependent Clp protease ATP-binding subun... 35 0.092
352ADPR_RHOER (Q01357) ATP-dependent protease ATP-binding subunit-l... 35 0.092
353RUVB_THIDN (Q30PX6) Holliday junction ATP-dependent DNA helicase... 35 0.092
354CLPB_RICCN (Q92JK8) Chaperone clpB 35 0.092
355CFXQ_CYAME (O22025) Protein cfxQ homolog 35 0.092
356RFC1_DROME (P35600) Activator 1 140 kDa subunit (Replication fac... 35 0.12
357NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl... 35 0.12
358PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso... 35 0.12
359ORC1_DEBHA (Q6BSE2) Origin recognition complex subunit 1 35 0.12
360MSP1_CAEEL (P54815) Protein MSP1 homolog 35 0.12
361MIAA_BACSU (O31795) tRNA delta(2)-isopentenylpyrophosphate trans... 35 0.12
362CLPB_LEPIC (Q72QU2) Chaperone clpB 35 0.12
363CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h... 35 0.12
364RUVB_PARUW (Q6MC67) Holliday junction ATP-dependent DNA helicase... 35 0.12
365HSLU_BUCAP (Q9Z617) ATP-dependent hsl protease ATP-binding subun... 35 0.12
366FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl... 35 0.12
367RUVB_GLUOX (Q5FQC4) Holliday junction ATP-dependent DNA helicase... 35 0.12
368ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein... 35 0.12
369PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro... 35 0.12
370PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso... 35 0.12
371Y282_MYCTU (O53687) Hypothetical protein Rv0282/MT0295 35 0.12
372RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC larg... 35 0.12
373YCAJ_ECOLI (P0AAZ4) Hypothetical protein ycaJ 35 0.12
374YCAJ_ECOL6 (P0AAZ5) Hypothetical protein ycaJ 35 0.12
375YCAJ_ECO57 (P0AAZ6) Hypothetical protein ycaJ 35 0.12
376PRS8_DROME (O18413) 26S protease regulatory subunit 8 35 0.12
377PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P... 34 0.16
378CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subun... 34 0.16
379GVPN_ANCAQ (Q9RH29) Gas vesicle protein gvpN 34 0.16
380RFCS_NATPD (Q3ITJ2) Replication factor C small subunit (RFC smal... 34 0.16
381PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2 34 0.16
382NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl... 34 0.16
383CFXQ_GUITH (O78450) Protein cfxQ homolog 34 0.16
384PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote... 34 0.20
385AROK_COREF (Q8FT30) Shikimate kinase (EC 2.7.1.71) (SK) 34 0.20
386RUVB_THETH (Q56214) Holliday junction ATP-dependent DNA helicase... 34 0.20
387RUVB_THET8 (Q5SL87) Holliday junction ATP-dependent DNA helicase... 34 0.20
388CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog 34 0.20
389YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-) 34 0.20
390RUVB_RALSO (Q8Y236) Holliday junction ATP-dependent DNA helicase... 34 0.20
391RFCL_PYRAE (Q8ZYK3) Replication factor C large subunit (RFC larg... 34 0.20
392PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote... 34 0.20
393PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote... 34 0.20
394PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote... 34 0.20
395CLPE_STRPN (P35594) ATP-dependent Clp protease ATP-binding subun... 34 0.20
396AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as... 34 0.20
397PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog 34 0.20
398CLPX2_WOLSU (Q7M8U5) ATP-dependent Clp protease ATP-binding subu... 34 0.20
399RUVB_THET2 (P61537) Holliday junction ATP-dependent DNA helicase... 34 0.20
400HSLU_PSESM (Q87V00) ATP-dependent hsl protease ATP-binding subun... 34 0.20
401TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h... 33 0.27
402RUVB_XANOR (Q5H2A4) Holliday junction ATP-dependent DNA helicase... 33 0.27
403RUVB_XANOM (Q2P575) Holliday junction ATP-dependent DNA helicase... 33 0.27
404RUVB_STAES (Q8CS91) Holliday junction ATP-dependent DNA helicase... 33 0.27
405RUVB_STAEQ (Q5HNR0) Holliday junction ATP-dependent DNA helicase... 33 0.27
406MIAA_STRP6 (Q5XCI0) tRNA delta(2)-isopentenylpyrophosphate trans... 33 0.27
407HSLU_HELPY (O25254) ATP-dependent hsl protease ATP-binding subun... 33 0.27
408RUVB_XANCP (Q8P6E7) Holliday junction ATP-dependent DNA helicase... 33 0.27
409RUVB_XANC8 (Q4UXL7) Holliday junction ATP-dependent DNA helicase... 33 0.27
410RUVB_XANC5 (Q3BQF5) Holliday junction ATP-dependent DNA helicase... 33 0.27
411RUVB_XANAC (Q8PHV2) Holliday junction ATP-dependent DNA helicase... 33 0.27
412TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h... 33 0.27
413RUVB_STAHJ (Q4L6Y6) Holliday junction ATP-dependent DNA helicase... 33 0.27
414RFCS_METMA (Q8PVY4) Replication factor C small subunit (RFC smal... 33 0.27
415RFCS_METAC (Q8TSX5) Replication factor C small subunit (RFC smal... 33 0.27
416ISTB_BACTB (Q99338) Insertion sequence IS232 putative ATP-bindin... 33 0.27
417HSLU_BACHK (Q6HEY6) ATP-dependent hsl protease ATP-binding subun... 33 0.27
418HSLU_BACCZ (Q636J7) ATP-dependent hsl protease ATP-binding subun... 33 0.27
419HSLU_BACCR (Q819X7) ATP-dependent hsl protease ATP-binding subun... 33 0.27
420HSLU_BACAN (Q81WK6) ATP-dependent hsl protease ATP-binding subun... 33 0.27
421RUVB_XYLFT (Q87D00) Holliday junction ATP-dependent DNA helicase... 33 0.27
422RUVB_XYLFA (Q9PC79) Holliday junction ATP-dependent DNA helicase... 33 0.27
423RUVB_BACSK (Q5WHR5) Holliday junction ATP-dependent DNA helicase... 33 0.27
424CLPX_NOCFA (Q5Z061) ATP-dependent Clp protease ATP-binding subun... 33 0.27
425CLPX_MYCTU (P0A528) ATP-dependent Clp protease ATP-binding subun... 33 0.27
426CLPX_MYCPA (Q73XN1) ATP-dependent Clp protease ATP-binding subun... 33 0.27
427CLPX_MYCLE (Q9CBY6) ATP-dependent Clp protease ATP-binding subun... 33 0.27
428CLPX_MYCBO (P0A529) ATP-dependent Clp protease ATP-binding subun... 33 0.27
429RFC1_MOUSE (P35601) Activator 1 140 kDa subunit (Replication fac... 33 0.27
430RUVB_MYCPN (P75242) Holliday junction ATP-dependent DNA helicase... 33 0.27
431CLPA_BRANA (P46523) ATP-dependent Clp protease ATP-binding subun... 33 0.27
432HSLU_BORPE (Q7VUJ9) ATP-dependent hsl protease ATP-binding subun... 33 0.27
433HSLU_BORPA (Q7W216) ATP-dependent hsl protease ATP-binding subun... 33 0.27
434HSLU_BORBR (Q7WQZ4) ATP-dependent hsl protease ATP-binding subun... 33 0.27
435Y055_MYCLE (O33089) Hypothetical protein ML0055 33 0.35
436SYH_IDILO (Q5QYB0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histi... 33 0.35
437MIAA_LISMO (Q8Y7I3) tRNA delta(2)-isopentenylpyrophosphate trans... 33 0.35
438MIAA_LISMF (Q720C8) tRNA delta(2)-isopentenylpyrophosphate trans... 33 0.35
439SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia... 33 0.35
440RUVB_STAAW (P66759) Holliday junction ATP-dependent DNA helicase... 33 0.35
441RUVB_STAAS (Q6G8S8) Holliday junction ATP-dependent DNA helicase... 33 0.35
442RUVB_STAAR (Q6GG63) Holliday junction ATP-dependent DNA helicase... 33 0.35
443RUVB_STAAN (P66758) Holliday junction ATP-dependent DNA helicase... 33 0.35
444RUVB_STAAM (P66757) Holliday junction ATP-dependent DNA helicase... 33 0.35
445RUVB_STAAC (Q5HFC2) Holliday junction ATP-dependent DNA helicase... 33 0.35
446RUVB_STAAB (Q2YT89) Holliday junction ATP-dependent DNA helicase... 33 0.35
447RUVB_STAA3 (Q2FG86) Holliday junction ATP-dependent DNA helicase... 33 0.35
448YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.... 33 0.35
449YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.... 33 0.35
450YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.... 33 0.35
451RFCS_METTH (O26343) Replication factor C small subunit (RFC smal... 33 0.35
452PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T... 33 0.35
453RUVB_GLOVI (Q7NGP9) Holliday junction ATP-dependent DNA helicase... 33 0.35
454HSLU_YERPS (Q66G85) ATP-dependent hsl protease ATP-binding subun... 33 0.35
455HSLU_YERPE (Q8ZJJ5) ATP-dependent hsl protease ATP-binding subun... 33 0.35
456HSLU_VIBVY (Q7MH56) ATP-dependent hsl protease ATP-binding subun... 33 0.35
457HSLU_VIBVU (Q8DCP4) ATP-dependent hsl protease ATP-binding subun... 33 0.35
458HSLU_VIBPA (Q87T21) ATP-dependent hsl protease ATP-binding subun... 33 0.35
459HSLU_SHIFL (P0A6H7) ATP-dependent hsl protease ATP-binding subun... 33 0.35
460HSLU_SHEON (Q8E9U9) ATP-dependent hsl protease ATP-binding subun... 33 0.35
461HSLU_SALTY (O30911) ATP-dependent hsl protease ATP-binding subun... 33 0.35
462HSLU_SALTI (Q8Z2Z0) ATP-dependent hsl protease ATP-binding subun... 33 0.35
463HSLU_SALPA (Q5PIR9) ATP-dependent hsl protease ATP-binding subun... 33 0.35
464HSLU_PHOPR (Q6LVI3) ATP-dependent hsl protease ATP-binding subun... 33 0.35
465HSLU_PHOLL (Q7MYC1) ATP-dependent hsl protease ATP-binding subun... 33 0.35
466HSLU_PASMU (P57968) ATP-dependent hsl protease ATP-binding subun... 33 0.35
467HSLU_PASHA (P32180) ATP-dependent hsl protease ATP-binding subun... 33 0.35
468HSLU_MANSM (Q65VY1) ATP-dependent hsl protease ATP-binding subun... 33 0.35
469HSLU_ERWCT (Q6CZ91) ATP-dependent hsl protease ATP-binding subun... 33 0.35
470HSLU_ECOLI (P0A6H5) ATP-dependent hsl protease ATP-binding subun... 33 0.35
471HSLU_ECOL6 (Q8FBC0) ATP-dependent hsl protease ATP-binding subun... 33 0.35
472HSLU_ECO57 (P0A6H6) ATP-dependent hsl protease ATP-binding subun... 33 0.35
473RUVB_RALEJ (Q475R8) Holliday junction ATP-dependent DNA helicase... 33 0.35
474RUVB_LEIXX (Q6AFB4) Holliday junction ATP-dependent DNA helicase... 33 0.35
475RFCS1_PYRAE (Q8ZYK4) Replication factor C small subunit 1 (RFC s... 33 0.35
476FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor... 33 0.35
477CLPX_RHOBA (Q7UKU7) ATP-dependent Clp protease ATP-binding subun... 33 0.35
478CLPX_LEIXX (Q6AFZ6) ATP-dependent Clp protease ATP-binding subun... 33 0.35
479CLPAA_LYCES (P31541) ATP-dependent Clp protease ATP-binding subu... 33 0.35
480RUVB_LACJO (P61533) Holliday junction ATP-dependent DNA helicase... 33 0.35
481KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ... 33 0.35
482KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E... 33 0.35
483KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E... 33 0.35
484CDAT_PLAF7 (P46468) Putative cell division cycle ATPase 33 0.35
485HSLU_HAEIN (P43773) ATP-dependent hsl protease ATP-binding subun... 33 0.35
486HSLU_THETN (Q8R9Y3) ATP-dependent hsl protease ATP-binding subun... 33 0.45
487RFC4_CAEEL (P53016) Probable activator 1 37 kDa subunit (Replica... 33 0.45
488CLPX_NEIMB (Q9JYY3) ATP-dependent Clp protease ATP-binding subun... 33 0.45
489CLPX_NEIMA (Q9JTX8) ATP-dependent Clp protease ATP-binding subun... 33 0.45
490HSLU_BUCAI (P57116) ATP-dependent hsl protease ATP-binding subun... 33 0.45
491CLPX_LACLC (Q8GJP6) ATP-dependent Clp protease ATP-binding subun... 33 0.45
492CLPX_LACLA (Q9CGE6) ATP-dependent Clp protease ATP-binding subun... 33 0.45
493RUVB_NOCFA (Q5YTE8) Holliday junction ATP-dependent DNA helicase... 33 0.45
494OPPD_LACLC (P50980) Oligopeptide transport ATP-binding protein oppD 33 0.45
495FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor... 33 0.45
496CLPX_BACSK (Q5WEN9) ATP-dependent Clp protease ATP-binding subun... 33 0.45
497CLPX_BACHK (Q6HD54) ATP-dependent Clp protease ATP-binding subun... 33 0.45
498CLPX_BACCZ (Q633X2) ATP-dependent Clp protease ATP-binding subun... 33 0.45
499CLPX_BACCR (Q817Q2) ATP-dependent Clp protease ATP-binding subun... 33 0.45
500CLPX_BACC1 (Q72ZV4) ATP-dependent Clp protease ATP-binding subun... 33 0.45

>LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 885

 Score =  299 bits (766), Expect = 2e-81
 Identities = 148/153 (96%), Positives = 151/153 (98%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           PVLCFVGPPGVGKTSLA+SIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG
Sbjct: 403 PVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 462

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK FNDHYLNVPFDLSKV+FV
Sbjct: 463 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKAFNDHYLNVPFDLSKVIFV 522

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATANRMQPIPP LLDRME+IELPGYTPEEKLKI
Sbjct: 523 ATANRMQPIPPPLLDRMEIIELPGYTPEEKLKI 555



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>LONH1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 875

 Score =  286 bits (731), Expect = 2e-77
 Identities = 139/153 (90%), Positives = 147/153 (96%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LCFVGPPGVGKTSLA SI+ AL RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG
Sbjct: 403 PILCFVGPPGVGKTSLAASISAALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 462

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +KRV VSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP+DLSKV+FV
Sbjct: 463 IKRVGVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPYDLSKVIFV 522

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATAN++QPIPP LLDRMEVIELPGYTPEEK +I
Sbjct: 523 ATANKVQPIPPPLLDRMEVIELPGYTPEEKARI 555



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>LONH1_ARATH (O64948) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 888

 Score =  284 bits (727), Expect = 7e-77
 Identities = 140/153 (91%), Positives = 147/153 (96%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           PVLCFVGPPGVGKTSLA+SIA AL RKF+R+SLGGVKDEADIRGHRRTYIGSMPGRLIDG
Sbjct: 402 PVLCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMPGRLIDG 461

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           LKRV V NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK+FNDHYLNVP+DLSKVVFV
Sbjct: 462 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVVFV 521

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATANR+QPIPP LLDRME+IELPGYT EEKLKI
Sbjct: 522 ATANRVQPIPPPLLDRMELIELPGYTQEEKLKI 554



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>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)|
          Length = 826

 Score =  234 bits (596), Expect = 1e-61
 Identities = 109/153 (71%), Positives = 130/153 (84%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  S+AKA  RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR I  
Sbjct: 372 PILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGGVRDEAEIRGHRRTYVGALPGRFIQS 431

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+    NPVM+LDEIDK G+D RGDP++ALLEVLDPEQN TF+DHYL+VPFDLSKV+FV
Sbjct: 432 MKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYLDVPFDLSKVMFV 491

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATAN++ PIP  L DRME+IEL GYT EEK  I
Sbjct: 492 ATANQLDPIPGPLRDRMEIIELTGYTFEEKQSI 524



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>LON1_MYXXA (P36773) ATP-dependent protease La 1 (EC 3.4.21.53)|
          Length = 817

 Score =  226 bits (576), Expect = 2e-59
 Identities = 109/153 (71%), Positives = 127/153 (83%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           PVLCFVGPPGVGKTSLA SIA+A  RKF+R+SLGGV+DEA+IRGHRRTYIG+MPG+LI  
Sbjct: 362 PVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPGKLIQS 421

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           LK+   +NPV LLDEIDK  +D RGDP++ALLEVLDPEQN TFNDHYL++ +DLSKV+F+
Sbjct: 422 LKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMFI 481

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN M  IP  L DRMEVI + GYT  EKL I
Sbjct: 482 CTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSI 514



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>LON_ERWAM (P46067) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 784

 Score =  221 bits (564), Expect = 5e-58
 Identities = 110/153 (71%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIAKA  RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI  
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +V V NP+ LLDEIDK  SD+RGDPASALLEVLDPEQN  FNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFV 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRMEVI L GYT +EKL I
Sbjct: 470 ATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNI 501



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>LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53)|
          Length = 774

 Score =  221 bits (563), Expect = 7e-58
 Identities = 104/153 (67%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC  GPPGVGKTSLA SIAK+L RKF+RISLGGV+DE++IRGHRRTY+G+MPGR+I G
Sbjct: 348 PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQG 407

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+    NPV LLDEIDK  SD RGDP+SA+LEVLDPEQN +F+DHY+   FDLSKV+F+
Sbjct: 408 MKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFI 467

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATAN +  IP  L DRME+I + GYT  EKL+I
Sbjct: 468 ATANNLATIPGPLRDRMEIINIAGYTEIEKLEI 500



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>LON_ECOLI (P0A9M0) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 784

 Score =  220 bits (560), Expect = 2e-57
 Identities = 109/153 (71%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIAKA  RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI  
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +V V NP+ LLDEIDK  SD+RGDPASALLEVLDPEQN  F+DHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFV 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRMEVI L GYT +EKL I
Sbjct: 470 ATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNI 501



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>LON_ECOL6 (P0A9M1) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 784

 Score =  220 bits (560), Expect = 2e-57
 Identities = 109/153 (71%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIAKA  RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI  
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +V V NP+ LLDEIDK  SD+RGDPASALLEVLDPEQN  F+DHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFV 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRMEVI L GYT +EKL I
Sbjct: 470 ATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNI 501



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>LON_VIBPA (P74956) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 783

 Score =  220 bits (560), Expect = 2e-57
 Identities = 108/153 (70%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIA A  RK++R++LGGV+DEA+IRGHRRTYIGS+PG+LI  
Sbjct: 349 PILCLVGPPGVGKTSLGRSIASATGRKYVRMALGGVRDEAEIRGHRRTYIGSLPGKLIQK 408

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +V V NP+ LLDEIDK  SD+RGDPASALLEVLDPEQN +FNDHYL V +DLS V+FV
Sbjct: 409 MSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYDLSDVMFV 468

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRMEVI L GYT +EKL I
Sbjct: 469 ATSNSMN-IPGPLLDRMEVIRLSGYTEDEKLNI 500



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>LON_BRUSU (Q8G0I7) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 812

 Score =  219 bits (557), Expect = 3e-57
 Identities = 106/153 (69%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSLA SIAKA  R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I  
Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   SNP+ LLDEIDK G D RGDP+SA+LEVLDPEQN TF DHYL V +DLS V+FV
Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV 480

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN M  IP  LLDRME+I + GYT +EKL+I
Sbjct: 481 TTANTMN-IPGPLLDRMEIIRIAGYTEDEKLEI 512



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>LON_BRUAB (P0C113) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 812

 Score =  219 bits (557), Expect = 3e-57
 Identities = 106/153 (69%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSLA SIAKA  R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I  
Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   SNP+ LLDEIDK G D RGDP+SA+LEVLDPEQN TF DHYL V +DLS V+FV
Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV 480

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN M  IP  LLDRME+I + GYT +EKL+I
Sbjct: 481 TTANTMN-IPVPLLDRMEIIRIAGYTEDEKLEI 512



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>LON_BRUA2 (Q2YPX3) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 812

 Score =  219 bits (557), Expect = 3e-57
 Identities = 106/153 (69%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSLA SIAKA  R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I  
Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   SNP+ LLDEIDK G D RGDP+SA+LEVLDPEQN TF DHYL V +DLS V+FV
Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV 480

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN M  IP  LLDRME+I + GYT +EKL+I
Sbjct: 481 TTANTMN-IPVPLLDRMEIIRIAGYTEDEKLEI 512



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>LON_HAEIN (P43864) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 803

 Score =  218 bits (556), Expect = 4e-57
 Identities = 107/153 (69%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIA A  RK++R++LGGV+DEA+IRGHR+TYIG++PG+LI  
Sbjct: 350 PILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAEIRGHRKTYIGALPGKLIQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +V V NP+ LLDEIDK  SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMASDMRGDPASALLEVLDPEQNTTFNDHYLEVDYDLSDVMFV 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRMEVI L GYT +EKL I
Sbjct: 470 ATSNSMN-IPGPLLDRMEVIRLSGYTEDEKLNI 501



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>LON_CAUCR (P52977) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 799

 Score =  218 bits (556), Expect = 4e-57
 Identities = 104/153 (67%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIAKA  R+F+R+SLGGV+DEA+IRGHRRTYIGSMPG+++  
Sbjct: 346 PILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKVVQS 405

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   +N  +LLDEIDK GSD RGDPASALLEVLDP QN TF DHYL V +DLS+V+FV
Sbjct: 406 MKKAKTTNAFVLLDEIDKMGSDYRGDPASALLEVLDPSQNSTFGDHYLEVDYDLSQVMFV 465

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN +  +P  LLDRME+I +PGYT +EKL+I
Sbjct: 466 TTANSLN-MPQPLLDRMEIIRIPGYTEDEKLEI 497



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>LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 806

 Score =  218 bits (555), Expect = 6e-57
 Identities = 104/153 (67%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSLA SIAKA  R++IR++LGGV+DEA+IRGHRRTYIGSMPG+++  
Sbjct: 353 PILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRRTYIGSMPGKVVQS 412

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   SNP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHYL V +DLS V+F+
Sbjct: 413 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHYLEVEYDLSNVMFI 472

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN +  IPP L+DRMEVI + GYT +EK +I
Sbjct: 473 TTANTLN-IPPPLMDRMEVIRIAGYTEDEKREI 504



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>LON_BRUME (Q8YHC6) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 812

 Score =  217 bits (553), Expect = 1e-56
 Identities = 105/153 (68%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSLA SIAKA  R+++R+SLGGV+DEA+IRGHRRTYIGSMPG++I  
Sbjct: 361 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS 420

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   SNP+ LLDEIDK G D RGDP+SA+LEVLDP+QN TF DHYL V +DLS V+FV
Sbjct: 421 MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPKQNATFMDHYLEVEYDLSNVMFV 480

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN M  IP  LLDRME+I + GYT +EKL+I
Sbjct: 481 TTANTMN-IPGPLLDRMEIIRIAGYTEDEKLEI 512



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>LON_BRECH (P36772) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 779

 Score =  216 bits (551), Expect = 2e-56
 Identities = 102/153 (66%), Positives = 123/153 (80%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSLA S+A+AL R+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G
Sbjct: 349 PILCLVGPPGVGKTSLARSVARALGREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQG 408

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+    NPV LLDEIDK  SD RGDPASALLEVLDP QN  F+DHY+   +DL+ V+F+
Sbjct: 409 MKQAGTINPVFLLDEIDKLASDFRGDPASALLEVLDPNQNDKFSDHYIEETYDLTNVMFI 468

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN +  IP  LLDRMEVI + GYT  EKL I
Sbjct: 469 TTANSLDTIPRPLLDRMEVISISGYTELEKLNI 501



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>LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 810

 Score =  213 bits (543), Expect = 1e-55
 Identities = 103/153 (67%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+   VGPPGVGKTSL  SIAK+  R F+R+SLGGV+DEA++RGHRRTYIGSMPG++I G
Sbjct: 355 PIQSLVGPPGVGKTSLGKSIAKSTGRNFVRMSLGGVRDEAEVRGHRRTYIGSMPGKVIQG 414

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +K+   SNP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 415 MKKAKSSNPLFLLDEIDKLGADWRGDPSSALLEVLDPEQNGTFNDHYLEVDYDLSDVMFV 474

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN M+ +P  LLDRME+I + GYT +EK++I
Sbjct: 475 CTANTMR-MPQPLLDRMEIIRVAGYTEDEKVEI 506



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>LON_BUCAP (Q8K988) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 777

 Score =  211 bits (536), Expect = 9e-55
 Identities = 102/153 (66%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC +GPPGVGKTSL  SIAK+  RK++R++LGG++DEA+IRGHRRTYIGSMPG+L+  
Sbjct: 350 PILCLIGPPGVGKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIGSMPGKLMQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +  V NP+ LLDEIDK   D+R DPASALLEVLDPEQN  FNDHYL V +DLS V+FV
Sbjct: 410 MVKAKVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFV 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRME+I L GYT  EKL I
Sbjct: 470 ATSNSMN-IPAPLLDRMEIIRLSGYTENEKLNI 501



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>LON_BUCAI (P57549) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 777

 Score =  211 bits (536), Expect = 9e-55
 Identities = 102/153 (66%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC +GPPGVGKTSL  SIA++  RK++RI+LGG++DEA+IRGHRRTYIGSMPG+LI  
Sbjct: 350 PILCLIGPPGVGKTSLGKSIARSTGRKYVRIALGGIRDEAEIRGHRRTYIGSMPGKLIQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +  V NP+ LLDEIDK   D+R DPASALLEVLD EQN  FNDHYL V +DLS V+FV
Sbjct: 410 MAKAKVKNPLFLLDEIDKMSRDIRVDPASALLEVLDSEQNMNFNDHYLEVDYDLSDVMFV 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N M  IP  LLDRME+I L GYT +EKL I
Sbjct: 470 ATSNSMN-IPAPLLDRMEIIRLSGYTEDEKLNI 501



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>LON_AQUAE (O66605) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 795

 Score =  210 bits (535), Expect = 1e-54
 Identities = 99/152 (65%), Positives = 122/152 (80%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           +L FVGPPGVGKTSL  SIA+AL RKF+RI+LGG++DEA+IRGHRRTY+G+MPGR+I  +
Sbjct: 365 ILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIRDEAEIRGHRRTYVGAMPGRIIQAI 424

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K+    NPV++LDEIDK     +GDPA+ALLEVLDPEQNK F D Y+ +PFDLS+V+F+ 
Sbjct: 425 KQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEVIFIC 484

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           T NR   IP  LLDRME+I L GY+ EEKL I
Sbjct: 485 TGNRADTIPTPLLDRMELIMLSGYSEEEKLFI 516



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>LON_BUCBP (Q89A99) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 780

 Score =  210 bits (534), Expect = 2e-54
 Identities = 102/153 (66%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPGVGKTSL  SIA+A  RK+IR++LGG++DEA+IRGHRRTYIGSMPG++I  
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARATGRKYIRMALGGIRDEAEIRGHRRTYIGSMPGKIIQK 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +V V NP+ LLDEIDK   D+R DPASALLEVLDPEQN  FNDHYL V +DLS V+F+
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNVAFNDHYLEVDYDLSNVMFI 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           AT+N    IP  LLDRME+I + GYT  EKL I
Sbjct: 470 ATSNSTN-IPAPLLDRMEIIRISGYTEFEKLNI 501



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>LON_RICPR (Q9ZD92) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 784

 Score =  209 bits (533), Expect = 2e-54
 Identities = 102/153 (66%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC +GPPGVGKTSL  SIA+ + RK+ + SLGGV+DEA+IRGHR+TY+GSMPG+++  
Sbjct: 350 PILCLIGPPGVGKTSLVKSIAEGMGRKYTKFSLGGVRDEAEIRGHRKTYLGSMPGKILGQ 409

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           LK++  SNPVMLLDEIDK  SD RGDPASALLEVLDPEQN  F DHYL V +DLS VVF+
Sbjct: 410 LKKIKTSNPVMLLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVVFI 469

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATAN    +P AL DRME I + GY  EEKL+I
Sbjct: 470 ATAN-SHDLPRALSDRMEKIYISGYVEEEKLQI 501



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>LON_CHLMU (Q9PK50) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 819

 Score =  208 bits (530), Expect = 5e-54
 Identities = 98/152 (64%), Positives = 123/152 (80%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C VGPPGVGKTS+  SIAK L+RKF R S+GG++DEA+I+GHRRTYIG+MPG+L+  L
Sbjct: 387 IICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKLVQAL 446

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K+ ++ NPV+++DE+DK GS   GDPASALLEVLDPEQNK F DHYL+V  DLS V+F+ 
Sbjct: 447 KQSAIMNPVIMIDEVDKIGSSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFIL 506

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  LLDRMEV+ L GY  EEKL+I
Sbjct: 507 TANVLDSIPDPLLDRMEVLRLSGYILEEKLQI 538



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>LON_CHLTR (O84348) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 819

 Score =  208 bits (529), Expect = 6e-54
 Identities = 98/152 (64%), Positives = 122/152 (80%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C VGPPGVGKTS+  SIAK L+RKF R S+GG++DEA+I+GHRRTYIG+MPG+L+  L
Sbjct: 387 IICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKLVQAL 446

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K+  + NPV+++DE+DK GS   GDPASALLEVLDPEQNK F DHYL+V  DLS V+F+ 
Sbjct: 447 KQSQIMNPVIMIDEVDKIGSSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFIL 506

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  LLDRMEV+ L GY  EEKL+I
Sbjct: 507 TANVLDSIPDPLLDRMEVLRLSGYILEEKLQI 538



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>LON_MYCSM (O31147) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 779

 Score =  208 bits (529), Expect = 6e-54
 Identities = 97/152 (63%), Positives = 124/152 (81%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           V+   GPPGVGKTSL  S+A+AL+RKF+R++LGGV+DEA+IRGHRRTY+G++PGR++  +
Sbjct: 347 VMVLAGPPGVGKTSLGESVARALDRKFVRVALGGVRDEAEIRGHRRTYVGALPGRIVRAI 406

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
                 NPV+LLDEIDK GSD RGDPA+ALLEVLDP QN TF DHYL++  DLS VVF+ 
Sbjct: 407 GEAGSMNPVVLLDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLV 466

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN ++ IP ALLDRME++E+ GYT ++KL I
Sbjct: 467 TANVIENIPSALLDRMELVEIDGYTADDKLAI 498



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>LONM_YEAST (P36775) Lon protease homolog, mitochondrial precursor (EC 3.4.21.-)|
          Length = 1133

 Score =  207 bits (526), Expect = 1e-53
 Identities = 97/153 (63%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
 Frame = +1

Query: 4    VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
            ++CFVGPPGVGKTS+  SIA+ALNRKF R S+GG+ D A+I+GHRRTYIG++PGR++  L
Sbjct: 627  IICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVAEIKGHRRTYIGALPGRVVQAL 686

Query: 184  KRVSVSNPVMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
            K+    NP++L+DEIDK G   + GDP++ALLEVLDPEQN +F D+YL++P DLSKV+FV
Sbjct: 687  KKCQTQNPLILIDEIDKIGHGGIHGDPSAALLEVLDPEQNNSFLDNYLDIPIDLSKVLFV 746

Query: 361  ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
             TAN ++ IP  LLDRMEVIEL GY  E+K+KI
Sbjct: 747  CTANSLETIPRPLLDRMEVIELTGYVAEDKVKI 779



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>LON_CHLPN (Q9Z9F4) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 819

 Score =  204 bits (520), Expect = 7e-53
 Identities = 95/152 (62%), Positives = 121/152 (79%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C VGPPGVGKTS+  SIAK L+RKF R S+GG++DEA+I+GHRRTYIG+MPG+++  L
Sbjct: 388 IICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKMVQAL 447

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K+    NPV+++DE+DK G+   GDPASALLEVLDPEQNK F DHYL+V  DLS V+F+ 
Sbjct: 448 KQSQAMNPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFIL 507

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  LLDRME++ L GY  EEKL+I
Sbjct: 508 TANVLDTIPDPLLDRMEILRLSGYILEEKLQI 539



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>LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 795

 Score =  204 bits (519), Expect = 9e-53
 Identities = 96/153 (62%), Positives = 126/153 (82%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P++C VGPPGVGK+SLA SIA+AL++KF++ISLGGV DE++IRGHR+TY+GSMPGR++ G
Sbjct: 373 PIMCLVGPPGVGKSSLAKSIAEALDKKFVKISLGGVHDESEIRGHRKTYLGSMPGRILKG 432

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + R  V NP+ LLDEIDK  S  +G P+ ALLEVLDPE N  F+D+Y+   +DLSKV+F+
Sbjct: 433 MTRAKVINPLFLLDEIDKMTSSNQGYPSGALLEVLDPELNNKFSDNYVEEDYDLSKVMFI 492

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATAN ++ IP ALLDRME+IEL  YT +EK++I
Sbjct: 493 ATANYIEDIPEALLDRMEIIELTSYTEQEKIEI 525



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>LON_MYCPN (P78025) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 795

 Score =  204 bits (518), Expect = 1e-52
 Identities = 98/153 (64%), Positives = 125/153 (81%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P++C VGPPGVGK+SLA SIA+ALN+ F+++SLGGV DE++IRGHR+TY+GSMPGR++ G
Sbjct: 373 PIMCLVGPPGVGKSSLAKSIAEALNKCFVKVSLGGVHDESEIRGHRKTYLGSMPGRILKG 432

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + R  V NP+ LLDEIDK  S  +G P+ ALLEVLDPE N  F+D+Y+   +DLSKV+FV
Sbjct: 433 MVRAKVINPLFLLDEIDKMTSSNQGYPSGALLEVLDPELNNKFSDNYVEEDYDLSKVMFV 492

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           ATAN ++ IP ALLDRMEVIEL  YT +EKL+I
Sbjct: 493 ATANYIEDIPEALLDRMEVIELTSYTEQEKLQI 525



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>LON2_BORBU (O51558) ATP-dependent protease La homolog (EC 3.4.21.-)|
          Length = 813

 Score =  203 bits (516), Expect = 2e-52
 Identities = 96/153 (62%), Positives = 123/153 (80%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           P+LC VGPPG+GKTSL  SIA++L+R+F++ISLGG++DEA+IRGHRRTY+GS+PG  I  
Sbjct: 363 PILCLVGPPGIGKTSLVESIARSLSREFVKISLGGLRDEAEIRGHRRTYVGSLPGVFISA 422

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +KR   SNPV+LLDEIDK  S  +G+P SALLEVLDPEQN  F DHYL +P+DLS V+FV
Sbjct: 423 MKRSGKSNPVILLDEIDKINSSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFV 482

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN +  +   LLDRME+I++ GY+  EKL+I
Sbjct: 483 TTANSLNGMSKPLLDRMEIIKVEGYSYIEKLEI 515



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>LON_HELPY (P55995) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 835

 Score =  202 bits (514), Expect = 3e-52
 Identities = 97/152 (63%), Positives = 115/152 (75%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           +LCF GPPGVGKTSLA SIAKA+ R  +RI+LGG++D  ++RGHRRTYIGSMPGR++ GL
Sbjct: 362 ILCFYGPPGVGKTSLANSIAKAIERPLVRIALGGLEDVNELRGHRRTYIGSMPGRIVQGL 421

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
                 NPVM+LDEIDK    VRGDPASALLE+LDPEQN  F DHY N   DLS+V+F+A
Sbjct: 422 IEAKKMNPVMVLDEIDKVDRSVRGDPASALLEILDPEQNTAFRDHYANFSIDLSQVIFIA 481

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  L DRME I +  YTP EK +I
Sbjct: 482 TANNIDRIPAPLRDRMEFISVSSYTPNEKEEI 513



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>LON_HELPJ (Q9ZJL3) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 831

 Score =  201 bits (512), Expect = 6e-52
 Identities = 97/152 (63%), Positives = 115/152 (75%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           +LCF GPPGVGKTSLA SIAKA+ R  +RI+LGG++D  ++RGHRRTYIGSMPGR++ GL
Sbjct: 362 ILCFYGPPGVGKTSLANSIAKAIERPLVRIALGGLEDVNELRGHRRTYIGSMPGRIVQGL 421

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
                 NPVM+LDEIDK    VRGDPASALLE+LDPEQN  F DHY N   DLS+V+F+A
Sbjct: 422 IEAKKMNPVMVLDEIDKVDRSVRGDPASALLEILDPEQNIAFRDHYANFSIDLSQVIFIA 481

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  L DRME I +  YTP EK +I
Sbjct: 482 TANNIDRIPAPLRDRMEFISVSSYTPSEKEEI 513



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>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial precursor (EC|
            3.4.21.-)
          Length = 1067

 Score =  201 bits (511), Expect = 7e-52
 Identities = 93/152 (61%), Positives = 119/152 (78%)
 Frame = +1

Query: 4    VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
            ++C VGPPGVGKTS+  SIA ALNR+F R S+GG+ D A+I+GHRRTYIG+MPG+++  L
Sbjct: 573  IMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKIVQAL 632

Query: 184  KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
            K+V   NP++L+DEIDK G   +GDPASALLE+LD EQN  F D+Y+++P D+S V+FV 
Sbjct: 633  KKVQTENPLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLDVSSVLFVC 692

Query: 364  TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN +  IPP LLDRMEVIEL GY   EK+ I
Sbjct: 693  TANTIDTIPPPLLDRMEVIELSGYVSAEKVNI 724



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>LON_TREPA (O83536) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 881

 Score =  201 bits (511), Expect = 7e-52
 Identities = 93/152 (61%), Positives = 118/152 (77%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++  VGPPGVGKTS+  SIA+A+++ F R S+GG+ DEA+I+GHRRTYIG++PG+++ GL
Sbjct: 435 IILLVGPPGVGKTSVGKSIARAIHKPFFRFSVGGISDEAEIKGHRRTYIGALPGKVLQGL 494

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K V    PV ++DE+DK GS  RGDPA ALLEVLDPEQN TF DHYL++PFDLS +VFV 
Sbjct: 495 KIVKTKAPVFMIDEVDKIGSGARGDPAGALLEVLDPEQNTTFRDHYLDLPFDLSHIVFVL 554

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN   PIP  LLDR E+I L GY   EK++I
Sbjct: 555 TANSTDPIPRPLLDRAEIIRLSGYIDTEKVEI 586



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>LONM_HUMAN (P36776) Lon protease homolog, mitochondrial precursor (EC|
           3.4.21.-) (Lon protease-like protein) (LONP) (LONHs)
          Length = 959

 Score =  198 bits (504), Expect = 5e-51
 Identities = 92/152 (60%), Positives = 119/152 (78%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           +LCF GPPGVGKTS+A SIA+ALNR++ R S+GG+ D A+I+GHRRTY+G+MPG++I  L
Sbjct: 518 ILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCL 577

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K+    NP++L+DE+DK G   +GDP+SALLE+LDPEQN  F DHYL+VP DLSKV+F+ 
Sbjct: 578 KKTKTENPLILIDEVDKIGRGYQGDPSSALLELLDPEQNANFLDHYLDVPVDLSKVLFIC 637

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN    IP  L DRME+I + GY  +EKL I
Sbjct: 638 TANVTDTIPEPLRDRMEMINVSGYVAQEKLAI 669



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>LONH2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 964

 Score =  198 bits (503), Expect = 6e-51
 Identities = 93/152 (61%), Positives = 120/152 (78%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C  GPPGVGKTS+  SIA+ALNR+F R S+GG+ D A+I+GHRRTY+G+MPG+++  L
Sbjct: 450 IICLSGPPGVGKTSIGRSIARALNRQFYRFSVGGLADVAEIKGHRRTYVGAMPGKMVQCL 509

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K V  +NP++L+DEIDK G    GDPASALLE+LDPEQN  F DHYL+VP DLSKV+FV 
Sbjct: 510 KSVGTANPLVLIDEIDKLGKGHSGDPASALLELLDPEQNVNFLDHYLDVPIDLSKVLFVC 569

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN ++ IP  LLDRME+I + GY  +EK+ I
Sbjct: 570 TANVIEMIPNPLLDRMEIIAIAGYITDEKMHI 601



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>LONM_CAEEL (O44952) Lon protease homolog, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 971

 Score =  197 bits (502), Expect = 8e-51
 Identities = 92/153 (60%), Positives = 123/153 (80%), Gaps = 1/153 (0%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           +LCF GPPGVGKTS+A SIA ALNR++ R S+GG+ D A+I+GHRRTY+G+MPG++I  +
Sbjct: 507 ILCFHGPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKMIQCM 566

Query: 184 KRVSVSNPVMLLDEIDKT-GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           K+V   NP++L+DE+DK  G+   GDPASALLE+LDPEQN  FNDH+L+VP DLS+V+F+
Sbjct: 567 KKVKTENPLVLIDEVDKIGGAGFHGDPASALLELLDPEQNANFNDHFLDVPVDLSRVLFI 626

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN +  IP  L DRME+I++ GY  EEK++I
Sbjct: 627 CTANEISKIPGPLRDRMEMIDVSGYLAEEKVEI 659



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>LONH2_ARATH (P93655) Lon protease homolog 2, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 940

 Score =  196 bits (499), Expect = 2e-50
 Identities = 94/152 (61%), Positives = 118/152 (77%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C  GPPGVGKTS+  SIA+ALNRKF R S+GG+ D A+I+GHRRTY+G+MPG+++  L
Sbjct: 459 IICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYVGAMPGKMVQCL 518

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K V  +NP++L+DEIDK G    GDPASALLE+LDPEQN  F DHYL+V  DLSKV+FV 
Sbjct: 519 KSVGTANPLVLIDEIDKLGRGHAGDPASALLELLDPEQNANFLDHYLDVTIDLSKVLFVC 578

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  LLDRMEVI + GY  +EK+ I
Sbjct: 579 TANVIDMIPNPLLDRMEVISIAGYITDEKVHI 610



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>LON_CAMJE (O69300) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 791

 Score =  193 bits (491), Expect = 2e-49
 Identities = 93/152 (61%), Positives = 113/152 (74%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           +LC  GPPGVGKTSLA S++KAL R+ IRI+LGG++D  ++RGHRRTYIG+MPGR+  GL
Sbjct: 359 ILCLYGPPGVGKTSLANSVSKALKRELIRIALGGLEDVNELRGHRRTYIGAMPGRITQGL 418

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
                 NPV++LDEIDK     RGDP++ LLE+LDPEQN  F D+YLN   DLSKV+F+A
Sbjct: 419 IEAKQINPVIVLDEIDKLNRSFRGDPSAVLLEILDPEQNSKFRDYYLNFNIDLSKVIFIA 478

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN +  IP  L DRME IEL  YTP EK  I
Sbjct: 479 TANDISNIPAPLRDRMEFIELSSYTPSEKFHI 510



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>LONH3_ARATH (Q9M9L8) Putative Lon protease homolog 3, mitochondrial precursor|
           (EC 3.4.21.-)
          Length = 924

 Score =  192 bits (488), Expect = 3e-49
 Identities = 92/152 (60%), Positives = 118/152 (77%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C  GPPGVGKTS+  SIA+AL+RKF R S+GG+ D A+I+GH +TY+G+MPG+++  L
Sbjct: 442 IICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMVQCL 501

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           K V  +NP++L DEIDK G    GDPASALLEV+DPEQN  F DH+LNV  DLSKV+FV 
Sbjct: 502 KSVGTANPLILFDEIDKLGRCHTGDPASALLEVMDPEQNAKFLDHFLNVTIDLSKVLFVC 561

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN ++ IP  LLDRMEVI+L GY  +EK+ I
Sbjct: 562 TANVIEMIPGPLLDRMEVIDLSGYVTDEKMHI 593



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>LONH4_ARATH (Q9M9L7) Putative Lon protease homolog 4, mitochondrial precursor|
           (EC 3.4.21.-)
          Length = 942

 Score =  191 bits (484), Expect = 1e-48
 Identities = 94/153 (61%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++C  GP GVGKTS+  SIA+AL+RKF R S+GG+ D A+I+GHRRTYIG+MPG+++  L
Sbjct: 451 IICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGKMVQCL 510

Query: 184 KRVSVSNPVMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           K V   NP++L+DEIDK G     GDPASA+LE+LDPEQN  F DHYL+VP DLSKV+FV
Sbjct: 511 KNVGTENPLVLIDEIDKLGVRGHHGDPASAMLELLDPEQNANFLDHYLDVPIDLSKVLFV 570

Query: 361 ATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            TAN    IP  LLDRMEVI L GY  +EK+ I
Sbjct: 571 CTANVTDTIPGPLLDRMEVITLSGYITDEKMHI 603



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>LON1_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 806

 Score =  188 bits (477), Expect = 6e-48
 Identities = 84/152 (55%), Positives = 116/152 (76%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           ++  VGPPGVGKTS+  +IAK L  KF R S+GG++DE++I+GHRRTY+G++PG++I GL
Sbjct: 384 IILLVGPPGVGKTSIGAAIAKVLRTKFFRFSVGGMRDESEIKGHRRTYVGALPGKIIQGL 443

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVA 363
           +    ++PV L+DE+DK  +   GDP S LLEVLDPEQN  F DHYL++PFD+S V F+ 
Sbjct: 444 RITKTNSPVFLIDEVDKISASSYGDPFSVLLEVLDPEQNVRFRDHYLDLPFDISNVFFIL 503

Query: 364 TANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
           TAN ++ IP  LL+RME+IE+ GY   EK++I
Sbjct: 504 TANSVETIPRPLLNRMEIIEISGYIDNEKIEI 535



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>LONH_MIMIV (Q5UPT0) Lon protease homolog (EC 3.4.21.-)|
          Length = 1023

 Score =  100 bits (249), Expect = 2e-21
 Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           V+  VGPPGVGKT LA  I+ AL      + LGG+ D AD+ GH  TY G+  G ++  +
Sbjct: 510 VIGLVGPPGVGKTLLAKGISAALGIPLSIVGLGGMSDSADLIGHSFTYAGAQYGMIVRQM 569

Query: 184 KRVSVSNPVMLLDEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLN--VPFDLSKVV 354
            +      VM  DE+DK    +   +  + L+ + DP  N+ F D + +  + FDLS V+
Sbjct: 570 IKAGNWRSVMFFDEVDKVSKRNDTNEIYNTLIHITDPNMNQNFQDRFYSSAIDFDLSGVL 629

Query: 355 FVATANRMQPIPPALLDRMEVIELPGYTPEEKLKI 459
            V + N  + + P LLDR++ I++  Y+ +EK+ I
Sbjct: 630 IVFSYNSSEKLDPILLDRIKEIKISPYSLKEKILI 664



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>CLPB_MYCPE (Q8EW28) Chaperone clpB|
          Length = 705

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           FVGP GVGKT +A S+A+ L    +  +RI++    ++  I    G    YIG    G L
Sbjct: 457 FVGPTGVGKTEVAKSLAENLFNTEKAIVRINMSEYMEKHSISRLIGAPPGYIGYEQAGEL 516

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+LLDEI+K   D+     + LL+VLD    K      +N        
Sbjct: 517 SEQIRRKPYS--VVLLDEIEKAHPDI----LNVLLQVLDEGTLKDNQGRNIN----FKNT 566

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 567 IIIMTSN 573



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>CLPB_STAES (Q8CPT5) Chaperone clpB|
          Length = 869

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    Y+G    G+L
Sbjct: 607 FLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  SDV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHSDV----FNVLLQILD 699



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + RK +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S    ++ +DEI
Sbjct: 259 KAVLKEVKESEGRIILFIDEI 279



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>CLPB_STAEQ (Q5HQI5) Chaperone clpB|
          Length = 869

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    Y+G    G+L
Sbjct: 607 FLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  SDV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHSDV----FNVLLQILD 699



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + RK +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S    ++ +DEI
Sbjct: 259 KAVLKEVKESEGRIILFIDEI 279



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>CLPA_ECOLI (P0ABH9) ATP-dependent Clp protease ATP-binding subunit clpA|
          Length = 758

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLIDG 180
           F GP GVGKT +   ++KAL  + +R  +    +   +    G    Y+G    G L D 
Sbjct: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +  +   + V+LLDEI+K   DV     + LL+V+D   N T  D+      D   VV V
Sbjct: 553 V--IKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADFRNVVLV 602

Query: 361 ATAN 372
            T N
Sbjct: 603 MTTN 606



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>CLPA_ECOL6 (P0ABI0) ATP-dependent Clp protease ATP-binding subunit clpA|
          Length = 758

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLIDG 180
           F GP GVGKT +   ++KAL  + +R  +    +   +    G    Y+G    G L D 
Sbjct: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +  +   + V+LLDEI+K   DV     + LL+V+D   N T  D+      D   VV V
Sbjct: 553 V--IKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADFRNVVLV 602

Query: 361 ATAN 372
            T N
Sbjct: 603 MTTN 606



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>CLPA_ECO57 (P0ABI1) ATP-dependent Clp protease ATP-binding subunit clpA|
          Length = 758

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLIDG 180
           F GP GVGKT +   ++KAL  + +R  +    +   +    G    Y+G    G L D 
Sbjct: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           +  +   + V+LLDEI+K   DV     + LL+V+D   N T  D+      D   VV V
Sbjct: 553 V--IKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADFRNVVLV 602

Query: 361 ATAN 372
            T N
Sbjct: 603 MTTN 606



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>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           F GPPG GKT +A ++A   N  FI +    +  E         ++G     + +  +R 
Sbjct: 159 FYGPPGTGKTLMARALATETNSSFILVKAPELIGE---------HVGDASKMIRELYQRA 209

Query: 193 SVSNP-VMLLDEIDKTG-----SDVRGDPA---SALLEVLDPEQNKTFNDHYLNVPFDLS 345
           S S P ++ +DE+D  G       +RGD +   +ALL  LD  +                
Sbjct: 210 SESAPCIVFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKEN-------------E 256

Query: 346 KVVFVATANRMQPIPPALLDRM-EVIELPGYTPEEKLKI 459
            VV +A  N    + PA+  R  E IE      EE+LKI
Sbjct: 257 GVVTIAATNNPAMLDPAIRSRFEEEIEFKLPNDEERLKI 295



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>CLPB2_SYNY3 (P74361) Chaperone clpB 2|
          Length = 872

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++AK L       +RI +    ++   + + G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DEI+K      GD  + +L++LD  +      H +    D    
Sbjct: 669 TEAIRRRPYS--VILFDEIEK----AHGDVFNVMLQILDDGRLTDAQGHVV----DFKNT 718

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 719 IIIMTSN 725



 Score = 32.0 bits (71), Expect = 0.78
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +          +RK I + +G +     I G +  Y 
Sbjct: 204 PVL--IGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMGAL-----IAGAK--YR 254

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228
           G    RL   LK V+ S    ++ +DEI
Sbjct: 255 GEFEERLKAVLKEVTDSQGQIILFIDEI 282



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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           +  VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  +
Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 238

Query: 187 RVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357
               S P ++ +DEID  G   RG    A L     E+ +T N   + +  FD ++ ++ 
Sbjct: 239 HSRKSAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFDGNEGIIL 293

Query: 358 VATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
           +A  NR   + PALL     DR  ++ LP     E++
Sbjct: 294 IAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQI 330



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>CLPB_STAAW (Q8NXE7) Chaperone clpB|
          Length = 869

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    YIG    G+L
Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + +K +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S+   ++ +DEI
Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279



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>CLPB_STAAS (Q6GAV1) Chaperone clpB|
          Length = 869

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    YIG    G+L
Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + +K +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S+   ++ +DEI
Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279



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>CLPB_STAAR (Q6GIB2) Chaperone clpB|
          Length = 869

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    YIG    G+L
Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + +K +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S+   ++ +DEI
Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279



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>CLPB_STAAN (Q7A6G6) Chaperone clpB|
          Length = 869

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    YIG    G+L
Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + +K +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S+   ++ +DEI
Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279



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>CLPB_STAAM (Q99VB5) Chaperone clpB|
          Length = 869

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    YIG    G+L
Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + +K +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S+   ++ +DEI
Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279



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>CLPB_STAAC (Q5HHB0) Chaperone clpB|
          Length = 869

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA S+A +L    +  IRI +    ++   + + G    YIG    G+L
Sbjct: 607 FLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL++LD
Sbjct: 667 TEAVRRNPYS--VILLDEVEKAHTDV----FNVLLQILD 699



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRIS-LGGVKDEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++   +A+ + +K +  S L     E D+        Y G    RL
Sbjct: 201 PVL--IGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERL 258

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK V  S+   ++ +DEI
Sbjct: 259 KAVLKEVKESDGRIILFIDEI 279



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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           +  VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  +
Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 238

Query: 187 RVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357
               S P ++ +DEID  G   RG    A L     E+ +T N   + +  FD ++ V+ 
Sbjct: 239 HARKSAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFDGNEGVIL 293

Query: 358 VATANRMQPIPPALL-----DRMEVIELP 429
           +A  NR   + PALL     DR  ++ LP
Sbjct: 294 IAATNRPDVLDPALLRPGRFDRQVIVALP 322



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>CLPB_MYCTU (P63288) Chaperone clpB|
          Length = 848

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT LA ++A  L    R  +RI +   G     A + G    Y+G    G+L
Sbjct: 605  FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQL 664

Query: 172  IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
             + ++R   +  V+L DEI+K   DV       LL+VLD  + +  + H   V  D    
Sbjct: 665  TEAVRRRPYT--VVLFDEIEKAHPDV----FDVLLQVLD--EGRLTDGHGRTV--DFRNT 714

Query: 352  VFVATANR-------------MQPIPPALLDRM-EVIELPGYTPEEKLKI 459
            + + T+N                   P  ++R+ +V+   G  PEE ++I
Sbjct: 715  ILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRI 764



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>CLPB_MYCBO (P63287) Chaperone clpB|
          Length = 848

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT LA ++A  L    R  +RI +   G     A + G    Y+G    G+L
Sbjct: 605  FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQL 664

Query: 172  IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
             + ++R   +  V+L DEI+K   DV       LL+VLD  + +  + H   V  D    
Sbjct: 665  TEAVRRRPYT--VVLFDEIEKAHPDV----FDVLLQVLD--EGRLTDGHGRTV--DFRNT 714

Query: 352  VFVATANR-------------MQPIPPALLDRM-EVIELPGYTPEEKLKI 459
            + + T+N                   P  ++R+ +V+   G  PEE ++I
Sbjct: 715  ILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRI 764



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>CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2|
          Length = 900

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKD---EADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT LA ++A +L       +R+ +    +    A + G    Y+G    G+L
Sbjct: 639  FLGPTGVGKTELAKALATSLFDEEEALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQL 698

Query: 172  IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
             + ++R   +  V+LLDE++K   DV     + LL+VLD    +  +   L V  D    
Sbjct: 699  TEAVRRRPYA--VLLLDEVEKAHPDV----FNLLLQVLD--DGRLTDSQGLTV--DFRHT 748

Query: 352  VFVATANRMQPI 387
            V V T+N   P+
Sbjct: 749  VVVMTSNLASPV 760



 Score = 32.0 bits (71), Expect = 0.78
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +            + I + LG +   A  RG     +
Sbjct: 240 PVL--IGEPGVGKTAIAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERL 297

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLE 279
            S    +++ + R S S  V+ +DE+    GSD     A +LL+
Sbjct: 298 RS----VLEEVSR-SDSGVVLFIDELHTVVGSDRSSTDAGSLLK 336



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>CLPB_MYCLE (Q9CB26) Chaperone clpB|
          Length = 848

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT LA ++A  L    R  +R+ +   G     A + G    YIG    G+L
Sbjct: 605  FLGPTGVGKTELAKALADFLFDDQRAMVRVDMSEYGEKHSVARLVGAPPGYIGHDQGGQL 664

Query: 172  IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD-----PEQNKTFNDHYLNVPF 336
             + ++R   +  V+L DE++K  SDV       LL+VLD       Q +T  D    +P 
Sbjct: 665  TEAVRRRPYT--VVLFDEVEKAHSDV----FDVLLQVLDEGRLTDGQGRTV-DFRNTIPI 717

Query: 337  DLSKVVFVATANRMQP-----IPPALLDRM-EVIELPGYTPEEKLKI 459
              S +    +  ++         P  ++R+ +V+   G  PEE ++I
Sbjct: 718  LTSNLGSGGSEEQVMAAVRSVFKPEFINRLDDVLIFDGLNPEELVRI 764



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>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A  L+  F+++    + D+         YIG     + +       
Sbjct: 191 GPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK---------YIGESARMIREMFNYARD 241

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFND--HYLNVPFDLSKVVFVATA 369
             P ++ +DEID  G     +  SA     D E  +T  +  + L+    L KV  +   
Sbjct: 242 HQPCIVFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQLDGFDSLGKVKVIMAT 296

Query: 370 NRMQPIPPAL-----LDRMEVIELP 429
           NR   + PAL     LDR   I LP
Sbjct: 297 NRPDTLDPALLRPGRLDRKIEIGLP 321



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>CLPA_RHOBL (P05444) ClpA homolog protein|
          Length = 793

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRLIDG 180
           F GP GVGKT +A  +A  L  + +R  +    ++   + + G    Y+G    G L DG
Sbjct: 523 FTGPTGVGKTEVAKQLAATLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDG 582

Query: 181 LKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           + +    + V+LLDEI+K   DV     + LL+V+D  +    N   +    D   V+ +
Sbjct: 583 VDQ--HPHCVLLLDEIEKAHPDV----YNILLQVMDHGKLTDHNGRAV----DFRNVILI 632

Query: 361 ATAN 372
            T+N
Sbjct: 633 MTSN 636



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>CLPB_PSESM (Q889C2) Chaperone clpB|
          Length = 854

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A+ L       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+LLDE++K  SDV     + LL+VL  E  +  + H   V  D    
Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHSDV----FNILLQVL--EDGRLTDSHGRTV--DFRNT 712

Query: 352 VFVATAN 372
           V V T+N
Sbjct: 713 VIVMTSN 719



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>CLPB_PROMA (Q7VBL0) Chaperone clpB|
          Length = 864

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLI 174
           +GP GVGKT L+ S+AK L    +  IRI +    ++  I    G    Y+G    G+L 
Sbjct: 611 LGPTGVGKTELSKSLAKELFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLS 670

Query: 175 DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
           + ++R   S  V+L DE++K  SDV     + +L++LD
Sbjct: 671 EAVRRNPYS--VILFDEVEKANSDV----LNIMLQILD 702



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          NR+ I + +G +     I G +  Y 
Sbjct: 203 PVL--IGEPGVGKTAIVEGLAQRIINGDVPSALQNRQLIALDMGAL-----IAGAK--YR 253

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228
           G    RL   LK V+ S    V+ +DEI
Sbjct: 254 GEFEERLKAVLKEVTSSQGQIVLFIDEI 281



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>CLPB_MEIRU (Q7X2S8) Chaperone clpB|
          Length = 854

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A +L       +RI +   +++   A + G    Y+G    G+L
Sbjct: 593 FLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQL 652

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K   DV     + LL+VLD
Sbjct: 653 TEAVRRRPYS--VILFDEIEKAHPDV----FNVLLQVLD 685



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>RUVB_CAUCR (Q9A3G8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           VL F GPPG+GKT+LA  +A+ L   F R + G V ++              PG L   L
Sbjct: 56  VLLF-GPPGLGKTTLAQIVARELGVNF-RATSGPVLNK--------------PGDLAAIL 99

Query: 184 KRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-----------NV 330
             +  +N V+ +DEI +  S+V         E+L P       DH L           ++
Sbjct: 100 TNLE-ANDVLFIDEIHRLSSNVE--------EILYP----AMEDHVLDLVIGEGPSARSI 146

Query: 331 PFDLSKVVFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447
             DL+    VA   R   +   L DR  + I L  YTP E
Sbjct: 147 RIDLAPFTLVAATTRAGMLATPLRDRFGIPIRLEFYTPAE 186



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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A  L+  F+++    + D+         YIG     + +       
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 224

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369
             P ++ +DEID  G     +  SA     D E  +T  +    +  FD L +V  +   
Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDTLHRVKMIMAT 279

Query: 370 NRMQPIPPAL-----LDRMEVIELP 429
           NR   + PAL     LDR   I+LP
Sbjct: 280 NRPDTLDPALLRPGRLDRKIHIDLP 304



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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A  L+  F+++    + D+         YIG     + +       
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 224

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369
             P ++ +DEID  G     +  SA     D E  +T  +    +  FD L +V  +   
Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDTLHRVKMIMAT 279

Query: 370 NRMQPIPPAL-----LDRMEVIELP 429
           NR   + PAL     LDR   I+LP
Sbjct: 280 NRPDTLDPALLRPGRLDRKIHIDLP 304



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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A  L+  F+++    + D+         YIG     + +       
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 224

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369
             P ++ +DEID  G     +  SA     D E  +T  +    +  FD L +V  +   
Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDTLHRVKMIMAT 279

Query: 370 NRMQPIPPAL-----LDRMEVIELP 429
           NR   + PAL     LDR   I+LP
Sbjct: 280 NRPDTLDPALLRPGRLDRKIHIDLP 304



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>CLPB_DESVH (Q72AW6) Chaperone clpB|
          Length = 865

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A+AL       +R+ +    ++   A + G    Y+G    G+L
Sbjct: 608 FLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLIGAPPGYVGYDEGGQL 667

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DE++K   DV     + LL++LD    +  + H   V  D    
Sbjct: 668 TEAVRRKPYS--VVLFDEVEKAHPDV----FNTLLQILD--DGRLTDSHGRTV--DFRNT 717

Query: 352 VFVATANRMQP 384
           + + T+N   P
Sbjct: 718 IIIMTSNIGSP 728



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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  ++  
Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
            + P ++ +DEID  G   RG    A L     E+ +T N   + +  F+ ++ ++ +A 
Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
            NR   + PALL     DR  V+ LP     E++
Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330



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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  ++  
Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
            + P ++ +DEID  G   RG    A L     E+ +T N   + +  F+ ++ ++ +A 
Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
            NR   + PALL     DR  V+ LP     E++
Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330



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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  ++  
Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
            + P ++ +DEID  G   RG    A L     E+ +T N   + +  F+ ++ ++ +A 
Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
            NR   + PALL     DR  V+ LP     E++
Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330



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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  ++  
Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
            + P ++ +DEID  G   RG    A L     E+ +T N   + +  F+ ++ ++ +A 
Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
            NR   + PALL     DR  V+ LP     E++
Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330



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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  ++  
Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFEQAK 241

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
            + P ++ +DEID  G   RG    A L     E+ +T N   + +  F+ ++ ++ +A 
Sbjct: 242 KAAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 296

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
            NR   + PALL     DR  V+ LP     E++
Sbjct: 297 TNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 330



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>CLPB_CORGL (P53532) Chaperone clpB|
          Length = 852

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L   +R  IRI +   G     A + G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTELAKAVAEFLFDDDRAMIRIDMSEYGEKHSVARLVGAPPGYVGYDQGGQL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DE++K   DV       LL+VLD
Sbjct: 666 TEAVRRRPYT--VVLFDEVEKAHPDV----FDILLQVLD 698



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>CLPB2_STRAW (Q826F2) Chaperone clpB 2|
          Length = 879

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L       +R+ +   ++    + + G    Y+G    G+L
Sbjct: 611 FLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQL 670

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K  +DV     + LL++LD
Sbjct: 671 TEAVRRKPYS--VVLFDEIEKAHTDV----FNTLLQILD 703



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>CLPB_HELPJ (Q9ZMH1) Chaperone clpB|
          Length = 856

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT  A ++A+ L   ++  IRI +    ++  I    G    Y+G    G+L
Sbjct: 603 FLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYEEGGQL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+LLDE++K   DV     + LL+VLD E + T +     V  D    
Sbjct: 663 TEAVRRKPYS--VVLLDEVEKAHPDV----FNLLLQVLD-EGHLTDSK---GVRVDFKNT 712

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 713 ILILTSN 719



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>CLPB_AQUAE (O67588) Chaperone clpB|
          Length = 1006

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT L+ ++A+ L       IR+ +   K+E   A + G    Y+G    G+L
Sbjct: 724  FLGPTGVGKTELSKALAELLFGDEDALIRLDMSEFKEEHSVAKLIGAPPGYVGYEEGGKL 783

Query: 172  IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
             + ++R   S  V+LLDEI+K    V        L+VLD    +  + H   V  D    
Sbjct: 784  TEAVRRKPYS--VILLDEIEKAHPRV----LDLFLQVLD--DGRLTDSHGRTV--DFRNT 833

Query: 352  VFVATAN 372
            V + T+N
Sbjct: 834  VIIMTSN 840



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>CLPB_YEREN (Q9F746) Chaperone clpB|
          Length = 890

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMP 162
           V   VGP GVGKT  A +IA+++    +  I I++   ++    + ++G    Y+G    
Sbjct: 621 VFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSLKGSPPGYVGYGEG 680

Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
           G L + ++R   S  V+LLDEI+K  SDV         +V D  Q +     ++    D 
Sbjct: 681 GVLTEAVRRKPYS--VVLLDEIEKAHSDVH----ELFFQVFDKGQMEDGEGRFI----DF 730

Query: 343 SKVVFVATAN 372
              + + T+N
Sbjct: 731 KNTILLLTSN 740



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>CLPB_BIFLO (Q8G4X4) Chaperone clpB|
          Length = 889

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L    +  +RI +    ++A +    G    Y+G    G+L
Sbjct: 614 FLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQL 673

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DE++K   ++       LL+VLD
Sbjct: 674 TEAVRRRPYS--VVLFDEVEKANPEI----FDVLLQVLD 706



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>CLPB_WOLSU (Q7M9X4) Chaperone clpB|
          Length = 857

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT  A ++AK L   ++  +RI +    ++   + + G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTQSAKTLAKFLFDSDKNLVRIDMSEYMEKHAASRLVGAPPGYVGYEEGGQL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DEI+K   DV     + LL+VLD +   T N     V  D    
Sbjct: 666 TEAIRRKPYS--VVLFDEIEKAHPDV----FNILLQVLD-DGRLTDNK---GVTVDFRNT 715

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 716 IIILTSN 722



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLG-----GVKDEADIRGHRRTYIGSMPG 165
           P+L  +G PGVGKT++   +A+ +  K + +SL       +   A I G +  Y G    
Sbjct: 202 PIL--LGEPGVGKTAVVEGLAQRIIAKEVPLSLQNKRVVALDMSALIAGAK--YRGEFED 257

Query: 166 RLIDGLKRV-SVSNPVMLLDEI 228
           RL   ++ V    N ++ +DEI
Sbjct: 258 RLKKVVEEVKKAGNVILFIDEI 279



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>CLPB_MYCPA (Q73T66) Chaperone clpB|
          Length = 848

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L    R  +RI +   G     A + G    YIG    G+L
Sbjct: 605 FLGPTGVGKTELAKALADFLFDDKRAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQGGQL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DEI+K   DV       LL+VLD
Sbjct: 665 TEAVRRRPYT--VILFDEIEKAHPDV----FDVLLQVLD 697



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>CLPB_MYCGA (Q7NAZ3) Chaperone clpB|
          Length = 717

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT +A  +A  L    +  +RI +    +   +    G    YIG   PG L
Sbjct: 463 FLGPTGVGKTEVAKKLAYCLFDNEKAMVRIDMSEFMERHSVDKLIGSPPGYIGYDQPGVL 522

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            D ++    +  V+L DEI+K   DV     + LL++LD  Q    ++  +N        
Sbjct: 523 SDAIRTKPYA--VVLFDEIEKAHPDV----LNILLQILDDGQLTDNHNRLVN----FKNT 572

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 573 IIIMTSN 579



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>CLPB_MYCGE (P47597) Chaperone clpB|
          Length = 714

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+G  GVGKT LA S+A+ L    +  IR  +    ++   A + G    YIG    G L
Sbjct: 464 FLGSTGVGKTELAKSLAEVLFDNEKALIRFDMSEYMEKHSVAKLIGAPPGYIGYEQSGLL 523

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K   DV     + LL+VLD
Sbjct: 524 TEAVRRKPYS--VLLFDEIEKAHPDV----TNVLLQVLD 556



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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           +  VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  +
Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 238

Query: 187 RV-SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357
               V+  ++ +DEID  G   RG    A L     E+ +T N   + +  FD ++ ++ 
Sbjct: 239 HSRKVAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFDGNEGIIL 293

Query: 358 VATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
           +A  NR   + PALL     DR   + LP     EK+
Sbjct: 294 IAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKI 330



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>CLPB_THET8 (Q9RA63) Chaperone clpB|
          Length = 854

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       IRI +    ++   + + G    Y+G    G+L
Sbjct: 593 FLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL 652

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DEI+K   DV     + LL++LD    +  + H   V  D    
Sbjct: 653 TEAVRRRPYS--VILFDEIEKAHPDV----FNILLQILD--DGRLTDSHGRTV--DFRNT 702

Query: 352 VFVATANRMQPI 387
           V + T+N   P+
Sbjct: 703 VIILTSNLGSPL 714



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>CLPB_THET2 (Q72IK9) Chaperone clpB|
          Length = 854

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       IRI +    ++   + + G    Y+G    G+L
Sbjct: 593 FLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL 652

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DEI+K   DV     + LL++LD    +  + H   V  D    
Sbjct: 653 TEAVRRRPYS--VILFDEIEKAHPDV----FNILLQILD--DGRLTDSHGRTV--DFRNT 702

Query: 352 VFVATANRMQPI 387
           V + T+N   P+
Sbjct: 703 VIILTSNLGSPL 714



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>CLPB_PSEPK (Q88Q71) Chaperone clpB|
          Length = 854

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A+ L       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+LLDE++K   DV     + LL+VL  E  +  + H   V  D    
Sbjct: 663 TEAVRRKPYS--VVLLDEVEKAHPDV----FNVLLQVL--EDGRLTDSHGRTV--DFRNT 712

Query: 352 VFVATAN 372
           V V T+N
Sbjct: 713 VIVMTSN 719



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>CLPB_BACNO (P17422) Chaperone clpB|
          Length = 860

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A+ L       +RI +    ++   A + G    Y+G    G L
Sbjct: 608 FLGPTGVGKTELCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYL 667

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DE++K  SDV     + LL+VLD
Sbjct: 668 TEAVRRKPYS--VVLFDEVEKAHSDV----FNTLLQVLD 700



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>AMIB_PSEAE (Q51416) ATP-dependent protease ATP-binding subunit-like protein|
           amiB
          Length = 371

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALN---RKFIRISLGGVKDE---ADIRGHRRTYIGSMPGRLI 174
           F+GP GVGKT +  ++A+AL+     F R+ +  +  E   A + G    Y+G+  G  +
Sbjct: 94  FLGPTGVGKTEIVRALARALHGDAEGFCRVDMNTLSQEHYAAALTGAPPGYVGAKEGTTL 153

Query: 175 ---DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
              D L        ++L DE++K   +V      ALL VLD
Sbjct: 154 LEQDKLDGSPGRPGIVLFDELEKASPEV----VHALLNVLD 190



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>CLPB_HELPY (P71404) Chaperone clpB|
          Length = 856

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT  A ++A+ L   ++  IRI +    ++   + + G    Y+G    G+L
Sbjct: 603 FLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYLEKHAMSRLIGAAPGYVGYEEGGQL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+LLDE++K   DV     + LL+VLD E + T +     V  D    
Sbjct: 663 TEAVRRKPYS--VVLLDEVEKAHPDV----FNLLLQVLD-EGHLTDSK---GVRVDFKNT 712

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 713 ILILTSN 719



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>CLPB_LACLC (O68185) Chaperone clpB|
          Length = 867

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L       +RI +    ++  +    G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQL 665

Query: 172 IDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R    NP  ++LLDEI+K   DV     + LL+VLD
Sbjct: 666 TEAVRR----NPYTIILLDEIEKAHPDV----FNILLQVLD 698



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>CLPB_LACLA (Q9CFF3) Chaperone clpB|
          Length = 867

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L       +RI +    ++  +    G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQL 665

Query: 172 IDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R    NP  ++LLDEI+K   DV     + LL+VLD
Sbjct: 666 TEAVRR----NPYTIILLDEIEKAHPDV----FNILLQVLD 698



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>CLPB_BACCR (Q81GM5) Chaperone clpB|
          Length = 866

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A++L     + IRI +    ++   + + G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K   +V     + LL++LD
Sbjct: 669 TEAVRRKPYS--VVLLDEIEKAHPEV----FNILLQMLD 701



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>CLPB_BACC1 (Q73BY1) Chaperone clpB|
          Length = 866

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A++L     + IRI +    ++   + + G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K   +V     + LL++LD
Sbjct: 669 TEAVRRKPYS--VILLDEIEKAHPEV----FNILLQMLD 701



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>CLPB_BACAN (Q81TT4) Chaperone clpB|
          Length = 866

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A++L     + IRI +    ++   + + G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K   +V     + LL++LD
Sbjct: 669 TEAVRRKPYS--VILLDEIEKAHPEV----FNILLQMLD 701



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>CLPB_HUMAN (Q9H078) Caseinolytic peptidase B protein homolog (Suppressor of|
           potassium transport defect 3)
          Length = 707

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK----FIRISLGGVKDEADIRGHRRTYIGSMP--- 162
           V  F+G  G+GKT LA   AK +++     FIR+ +   ++  ++      +IGS P   
Sbjct: 376 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV----AKFIGSPPGYV 431

Query: 163 -----GRLIDGLKRVSVSNPVMLLDEIDKTGSDV 249
                G+L   LK+    N V+L DE+DK   DV
Sbjct: 432 GHEEGGQLTKKLKQ--CPNAVVLFDEVDKAHPDV 463



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>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT +A +IA  +N  FIR+    V  E       R YIG    RL+  L  ++ 
Sbjct: 178 GPPGCGKTLMAKAIAHEVNATFIRV----VGSEL-----VRKYIGE-GARLVHELFELAK 227

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366
                ++ +DEID  G+    +      EV     N+T       +  FD    V  +A 
Sbjct: 228 EKAPTIIFIDEIDAIGAKRLDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 282

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKLKI 459
            NR   + PALL     DR+  + LP +  E +L+I
Sbjct: 283 TNRPDILDPALLRPGRFDRLIEVPLPDF--EGRLEI 316



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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  K+  
Sbjct: 212 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 262

Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
            ++P ++ +DEID            G+D R    + LL  +D  +  T            
Sbjct: 263 ENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT------------ 310

Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELP 429
             ++ +A  NR+  +  ALL     DR   +++P
Sbjct: 311 -GIIIIAATNRVDVLDAALLRPGRFDRQVTVDVP 343



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>CLPB_PSEAE (Q9HVN5) Chaperone clpB|
          Length = 854

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A+ L       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+LLDE++K   DV     + LL+VL  E  +  + H   V  D    
Sbjct: 663 TEAIRRKPYS--VVLLDEVEKAHPDV----FNILLQVL--EDGRLTDSHGRTV--DFRNT 712

Query: 352 VFVATAN 372
           V V T+N
Sbjct: 713 VVVMTSN 719



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>RFCL_SULAC (Q4JAB1) Replication factor C large subunit (RFC large subunit)|
           (Clamp loader large subunit)
          Length = 437

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR--GHRRTYIGSMPGRLIDGLKRV 192
           GPPGVGKT+LA ++A+    + + ++    ++  DI+    R +  GS+ G         
Sbjct: 48  GPPGVGKTTLAEALARDYKLELLEMNASDSRNLRDIKDVAERASISGSLFG--------- 98

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            +   ++LLDEID   S        A+LE+++
Sbjct: 99  -IKGKIILLDEIDGIYSRADAGAIPAILELIE 129



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>CLPB_RAT (Q9WTT2) Caseinolytic peptidase B protein homolog (Suppressor of|
           potassium transport defect 3)
          Length = 677

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK----FIRISLGGVKDEADIRGHRRTYIGSMP--- 162
           V  F+G  G+GKT LA   AK +++     FIR+ +   ++  ++      +IGS P   
Sbjct: 346 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV----AKFIGSPPGYI 401

Query: 163 -----GRLIDGLKRVSVSNPVMLLDEIDKTGSDV 249
                G+L   LK+    N V+L DE+DK   DV
Sbjct: 402 GHEEGGQLTKKLKQ--CPNAVVLFDEVDKAHPDV 433



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>CLPB_MOUSE (Q60649) Caseinolytic peptidase B protein homolog (Suppressor of|
           potassium transport defect 3)
          Length = 677

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK----FIRISLGGVKDEADIRGHRRTYIGSMP--- 162
           V  F+G  G+GKT LA   AK +++     FIR+ +   ++  ++      +IGS P   
Sbjct: 346 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV----AKFIGSPPGYI 401

Query: 163 -----GRLIDGLKRVSVSNPVMLLDEIDKTGSDV 249
                G+L   LK+    N V+L DE+DK   DV
Sbjct: 402 GHEEGGQLTKKLKQ--CPNAVVLFDEVDKAHPDV 433



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>CLPB_PARUW (Q6MD97) Chaperone clpB|
          Length = 868

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMP 162
           V  F+GP GVGKT LA ++A  L   +   IR+ +    ++   + + G    YIG    
Sbjct: 601 VFLFLGPTGVGKTELAKALAFQLFNQDEALIRLDMSEYMEKHTVSKLIGSPPGYIGYEEG 660

Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
           G+L + L+R   +  V+L DEI+K   DV     + LL+V D  +        +N     
Sbjct: 661 GQLTEALRRRPYA--VVLFDEIEKAHPDV----FNILLQVFDDGRLTDSKGRVVN----C 710

Query: 343 SKVVFVATANRMQPIPPALLDRME 414
              +F+ T+N    +   LL++ME
Sbjct: 711 KNALFIMTSNIGSDL---LLEKME 731



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>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 8/145 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A  +   FI     G+ D+         YIG     + +       
Sbjct: 222 GPPGTGKTLLAKAVAATIGANFIFSPASGIVDK---------YIGESARIIREMFAYAKE 272

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369
             P ++ +DE+D  G     +  SA     D E  +T  +    +  FD L +   +   
Sbjct: 273 HEPCIIFMDEVDAIGGRRFSEGTSA-----DREIQRTLMELLTQMDGFDNLGQTKIIMAT 327

Query: 370 NRMQPIPPAL-----LDRMEVIELP 429
           NR   + PAL     LDR   I LP
Sbjct: 328 NRPDTLDPALLRPGRLDRKVEIPLP 352



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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 16/162 (9%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  K+  
Sbjct: 211 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 261

Query: 196 VSNPVML-LDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
            + P ++ +DEID            G+D R    + LL  +D  +  T            
Sbjct: 262 ENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNT------------ 309

Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
             ++ +A  NR   +  AL+     DR  +++ P Y+  +++
Sbjct: 310 -GIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEI 350



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>CLPB1_STRAW (Q82EU9) Chaperone clpB 1|
          Length = 870

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L    R  +RI +   G     A + G    Y+G    G+L
Sbjct: 607 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLVGAPPGYVGYEEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   +V       LL+VLD
Sbjct: 667 TEAVRRRPYS--VVLLDEVEKAHPEV----FDILLQVLD 699



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          N++ + + LG +   A  RG     +
Sbjct: 203 PVL--IGEPGVGKTAVVEGLAQRIVKGDVPESLKNKRLVALDLGAMVAGAKYRGEFEERL 260

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291
            ++   + D     S    +  +DE+    G+   GD A     +L P
Sbjct: 261 KTVLAEIKD-----SDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKP 303



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>CLPE_LACLC (Q9S5Z2) ATP-dependent Clp protease ATP-binding subunit clpE|
          Length = 748

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           FVGP GVGKT LA  +AK L   +   IR  +    ++   A + G    Y+G    G+L
Sbjct: 479 FVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQL 538

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDV 249
            + ++R   S  ++LLDEI+K   DV
Sbjct: 539 TERVRRNPYS--LILLDEIEKAHPDV 562



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIA----------KALNRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A          K  N++ IR+ +  +     IRG      
Sbjct: 148 PVL--IGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQ----F 201

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291
                +L+D +++   ++ +M +DEI +  G+   GD       +L P
Sbjct: 202 EERMQKLMDEIRK--RNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKP 247



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>CLPE_LACLA (Q9CI09) ATP-dependent Clp protease ATP-binding subunit clpE|
          Length = 748

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           FVGP GVGKT LA  +AK L   +   IR  +    ++   A + G    Y+G    G+L
Sbjct: 479 FVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQL 538

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDV 249
            + ++R   S  ++LLDEI+K   DV
Sbjct: 539 TERVRRNPYS--LILLDEIEKAHPDV 562



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIA----------KALNRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A          K  N++ IR+ +  +     IRG      
Sbjct: 148 PVL--IGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQ----F 201

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291
                +L+D +++   ++ +M +DEI +  G+   GD       +L P
Sbjct: 202 EERMQKLMDEIRK--RNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKP 247



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>CLPB_PROMP (Q7V2A3) Chaperone clpB|
          Length = 860

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L+  IAK +   N    R+ +    ++   + I G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTELSKVIAKTIFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGGQL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + +++   S  ++LLDEI+K   DV       LL+VLD
Sbjct: 666 TEAVRKNPYS--LILLDEIEKAHKDV----LDVLLQVLD 698



 Score = 33.5 bits (75), Expect = 0.27
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          NR+ I I +G +     I G +  Y 
Sbjct: 200 PVL--IGEPGVGKTAIVEGLAQRIVNGDVPSSLNNRQLISIDMGSL-----IAGAK--YR 250

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEIDK-TGSDVRG---DPASALLEVLDPEQNK--- 303
           G    R+ + LK+V  S    ++ +DEI    G+   G   D ++ L  +L   + +   
Sbjct: 251 GEFEERIKNVLKKVKSSEGKIILFIDEIHTVVGAGATGGSLDASNLLKPMLARGELRCIG 310

Query: 304 --TFNDHYLNVPFD 339
             T N+H  N+  D
Sbjct: 311 ATTINEHKQNIEKD 324



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>RUVB_RHIET (Q9L9C3) Holliday junction DNA helicase ruvB|
          Length = 346

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F   S   +    D+              L+  L+  
Sbjct: 58  FVGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDL------------AALLTNLE-- 103

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351
                V+ +DEI +           A+ E+L P       D  +       +V  DLSK 
Sbjct: 104 --ERDVLFIDEIHRLN--------PAVEEILYPAMEDYQLDLIIGEGPAARSVKIDLSKF 153

Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447
             VA   R+  +   L DR  + + L  YT EE
Sbjct: 154 TLVAATTRLGLLTTPLRDRFGIPVRLTFYTVEE 186



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>CLPB_CLOAB (Q97KG0) Chaperone clpB|
          Length = 865

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ +       IRI +    ++  +    G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDV 249
            + ++R   S  V+L DEI+K  SDV
Sbjct: 669 TEAVRRKPYS--VILFDEIEKAHSDV 692



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>CLPC_BACSU (P37571) Negative regulator of genetic competence clpC/mecB|
          Length = 810

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+++       IRI +    ++   + + G    Y+G    G+L
Sbjct: 543 FLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQL 602

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K   DV     + LL+VL+
Sbjct: 603 TEKVRRKPYS--VVLLDEIEKAHPDV----FNILLQVLE 635



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>CLPB_CORDI (Q6NF05) Chaperone clpB|
          Length = 849

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ +   +R  +RI +    ++   A + G    Y+G    G+L
Sbjct: 604 FLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQL 663

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DE++K   DV       LL+VLD
Sbjct: 664 TEAVRRRPYT--VVLFDEVEKAHPDV----FDILLQVLD 696



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>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT +A ++A  +N  FIR+    V  E       R +IG    RL+  L  ++ 
Sbjct: 179 GPPGCGKTLMAKAVANHVNATFIRV----VGSEL-----VRKFIGE-GARLVHELFELAK 228

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366
                ++ +DEID  G+    +      EV     N+T       +  FD    V  +A 
Sbjct: 229 EKAPTIIFIDEIDAIGAKRMDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 283

Query: 367 ANRMQPIPPALL-----DRMEVIELPGY 435
            NR   + PALL     DR+  + LP Y
Sbjct: 284 TNRPDILDPALLRPGRFDRLIEVPLPDY 311



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>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT +A ++A  +N  FIR+    V  E       R YIG    RL+  L  ++ 
Sbjct: 181 GPPGCGKTLMAKALAHEVNATFIRV----VGSEL-----VRKYIGE-GARLVHELFELAK 230

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366
                ++ +DEID  G+    +      EV     N+T       +  FD    V  +A 
Sbjct: 231 EKAPTIIFIDEIDAIGAKRMDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 285

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKLKI 459
            NR   + PALL     DR+  + LP +  E +L+I
Sbjct: 286 TNRPDILDPALLRPGRFDRLIEVPLPDF--EGRLEI 319



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>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT +A ++A  +N  FIR+    V  E       R YIG    RL+  L  ++ 
Sbjct: 181 GPPGCGKTLMAKALAHEVNATFIRV----VGSEL-----VRKYIGE-GARLVHELFELAK 230

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366
                ++ +DEID  G+    +      EV     N+T       +  FD    V  +A 
Sbjct: 231 EKAPTIIFIDEIDAIGAKRMDETTGGEREV-----NRTLMQLLAEMDGFDPRGNVKVIAA 285

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYTPEEKLKI 459
            NR   + PALL     DR+  + LP +  E +L+I
Sbjct: 286 TNRPDILDPALLRPGRFDRLIEVPLPDF--EGRLEI 319



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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           +  VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  +
Sbjct: 187 ILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVE---------MFVGVGASRVRDMFE 237

Query: 187 RVSVSNPVML-LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP--FDLSKVVF 357
           +   + P ++ +DEID  G   RG    A L     E+ +T N   + +        V+ 
Sbjct: 238 QAKKNAPCLIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQMLVEMDGFSGNDGVIV 292

Query: 358 VATANRMQPIPPAL-----LDRMEVIELPGYTPEEKL 453
           +A  NR   + PAL      DR  V+ LP     E++
Sbjct: 293 IAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQI 329



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>CLPB_PROFR (Q7WSY8) Chaperone clpB (Fragment)|
          Length = 729

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       +RI +    ++  +    G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K   DV     + LL+VLD
Sbjct: 666 TEAVRRRPYS--VVLLDEIEKVHPDV----FNFLLQVLD 698



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>CLPB_LACPL (Q88VX7) Chaperone clpB|
          Length = 867

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L   +   +RI +    ++  +    G    Y+G    G+L
Sbjct: 605 FLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++L DEI+K   DV     + LL+VLD
Sbjct: 665 TEAVRRNPYS--IVLFDEIEKAHPDV----FNILLQVLD 697



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>CLPB_HAEIN (P44403) Chaperone clpB|
          Length = 856

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++AK L       +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  +DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHADV----FNILLQVLD 695



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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA   +  F  IS     +          ++G    R+ D  K+  
Sbjct: 210 VGPPGTGKTLLAKAIAGEASAPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 260

Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
              P ++ +DEID            G+D R    + LL  +D     T            
Sbjct: 261 EKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDT------------ 308

Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELP 429
             V+ VA  NR+  +  ALL     DR  ++ LP
Sbjct: 309 -GVIVVAATNRIDVLDSALLRPGRFDRQIMVSLP 341



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>CLPB_TROW8 (Q83N78) Chaperone clpB|
          Length = 699

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL-NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLID 177
           F+GP GVGKT L  ++A  L + + +RI +    ++  I    G    YIG    G+L +
Sbjct: 447 FLGPTGVGKTQLVKALASLLYDGEIVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTE 506

Query: 178 GLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVF 357
            ++R   S  V+L DE +K   +V       LL+VLD  + +  + H   V  D    + 
Sbjct: 507 SVRRRPYS--VVLFDEAEKAHPEV----FDILLQVLD--EGRLTDSHGRTV--DFRNTII 556

Query: 358 VATAN 372
           V T+N
Sbjct: 557 VLTSN 561



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>CLPB_STRCO (Q8CJV9) Chaperone clpB|
          Length = 865

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L    R  +RI +    ++   A + G    Y+G    G+L
Sbjct: 607 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+LLDE++K   +V       LL+VLD
Sbjct: 667 TEAVRRRPYT--VVLLDEVEKAHPEV----FDILLQVLD 699



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          +++ + + LG +   A  RG     +
Sbjct: 203 PVL--IGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVALDLGAMVAGAKYRGEFEERL 260

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDK-TGSDVRGDPASALLEVLDP 291
            ++   + D     S    V  +DE+    G+   GD A     +L P
Sbjct: 261 KTVLAEIKD-----SDGQVVTFIDELHTVVGAGAGGDSAMDAGNMLKP 303



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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 8/145 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A +L   F+++    + D+         YIG     + +       
Sbjct: 173 GPPGTGKTLLARAVAASLGVNFLKVVSSAIVDK---------YIGESARIIREMFGYAKE 223

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATA 369
             P V+ +DEID  G     +  SA     D E  +T  +    +  FD L +   +   
Sbjct: 224 HEPCVIFMDEIDAIGGRRFSEGTSA-----DREIQRTLMELLNQMDGFDYLGQTKIIMAT 278

Query: 370 NRMQPIPPAL-----LDRMEVIELP 429
           NR   + PAL     LDR   I LP
Sbjct: 279 NRPDTLDPALLRPGRLDRKIEIPLP 303



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>CLPB1_CHLTE (Q8KG79) Probable chaperone clpB 1|
          Length = 438

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L       IRI +    +   +    G    Y+G    G+L
Sbjct: 176 FLGPTGVGKTELARTLAEYLFDDEDALIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQL 235

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K   DV     + LL++LD
Sbjct: 236 TEAVRRKPFS--VVLLDEIEKAHPDV----FNILLQILD 268



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>CLPB_STRAL (Q9Z6E4) Chaperone clpB|
          Length = 857

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISL---GGVKDEADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L    R  IRI +   G     A + G    Y+G    G+L
Sbjct: 603 FLGPTGVGKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K    V       LL+VLD
Sbjct: 663 TEAVRRRPYS--VVLLDEVEKAHPGV----FDILLQVLD 695



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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 15/161 (9%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A   +  F RIS     +          ++G    R+ D  K+  
Sbjct: 180 VGPPGTGKTLLARAVAGEASVPFFRISGSDFIE---------MFVGIGASRVRDLFKQAR 230

Query: 196 VSNP-VMLLDEIDKTG---------SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345
              P ++ +DE+D  G         +D R    + LL  +D   N T             
Sbjct: 231 EKAPGIIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTT------------- 277

Query: 346 KVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
            ++ +A  NR   + PALL     DR   ++ P     E +
Sbjct: 278 GLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAI 318



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>CLPB_TROWT (Q83FI1) Chaperone clpB|
          Length = 705

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL-NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRLID 177
           F+GP GVGKT L  ++A  L + + +RI +    ++  I    G    YIG    G+L +
Sbjct: 453 FLGPTGVGKTQLVKALASLLYDGEIVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTE 512

Query: 178 GLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVF 357
            ++R   S  V+L DE +K   +V       LL+VLD  + +  + H   V  D    + 
Sbjct: 513 SVRRRPYS--VVLFDEAEKAHPEV----FDILLQVLD--EGRLTDSHGRTV--DFRNTII 562

Query: 358 VATAN 372
           V T+N
Sbjct: 563 VLTSN 567



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>CLPB_ENTFA (Q831Y7) Chaperone clpB|
          Length = 868

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT LA ++A+ L       +RI +    ++   + + G    Y+G    G+L
Sbjct: 606  FLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQL 665

Query: 172  IDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345
             + ++R    NP  ++LLDEI+K   DV     + LL+VLD  +        +    D  
Sbjct: 666  TEAVRR----NPYTIVLLDEIEKAHPDV----FNILLQVLDDGRLTDSKGRVV----DFK 713

Query: 346  KVVFVATANRMQPIPPALLDRMEVIELPGYTPEE 447
              V + T+N    I   LL  +E +   G  PEE
Sbjct: 714  NTVLIMTSN----IGSQLL--LEGVTPEGTIPEE 741



 Score = 28.5 bits (62), Expect = 8.6
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDE--------ADIRGHRRTYIGS 156
           PVL  +G PGVGKT++   +A+ + RK +  +L   KD+        A I G +  + G 
Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVPENL---KDKTIFSLDMGALIAGAK--FRGE 256

Query: 157 MPGRLIDGLKRVSVSNP--VMLLDEI 228
              RL   LK V  S+   ++ +DEI
Sbjct: 257 FEERLKAVLKEVKKSDGKIILFIDEI 282



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>CLPB1_ANASP (Q8YUL9) Chaperone clpB 1|
          Length = 880

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L   +   +R+ +    ++  +    G    Y+G    G+L
Sbjct: 612 FMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 671

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 672 SEAVRRHPYS--VVLLDEVEKAHPDV----FNILLQVLD 704



 Score = 36.2 bits (82), Expect = 0.041
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A ++A+ +          NR+ I + +G +     I G +  Y 
Sbjct: 204 PVL--IGEPGVGKTAIAEALAQRIVNGDVPESLKNRQLISLDIGSL-----IAGAK--YR 254

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEIDK---TGSDVRG 255
           G    RL   L+ V+ SN   V+ +DE+     TGS+ +G
Sbjct: 255 GEFEDRLKAVLREVTESNGNIVLFIDELHTVVGTGSNQQG 294



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>CLPB_CHRVO (Q7NWN7) Chaperone clpB|
          Length = 859

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
 Frame = +1

Query: 13   FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
            F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 607  FLGPTGVGKTELCKTLASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYL 666

Query: 172  IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
             + ++R   S  V+LLDE++K   DV     + LL+VLD  +        +    D    
Sbjct: 667  TEQVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLDDGRLTDGQGRTV----DFKNT 716

Query: 352  VFVATAN-RMQPIPPALLDRMEVIEL 426
            V V T+N   Q I     D  +VI+L
Sbjct: 717  VIVMTSNIGSQQIQAMATDDYQVIKL 742



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>CLPB2_SYNEL (Q8DG71) Chaperone clpB 2|
          Length = 887

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+AL       +RI +    ++  +    G    Y+G    G+L
Sbjct: 617 FMGPTGVGKTELARALAEALFDDENALVRIDMSEYMEKHAVSRMIGAPPGYVGFDSGGQL 676

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DE++K   +V     + LL+VLD
Sbjct: 677 TEAIRRRPYA--VVLFDEVEKAHPEV----FNVLLQVLD 709



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRG 132
           PVL  +G PGVGKT++A  +A+ +          NR+ I + LG +   A  RG
Sbjct: 203 PVL--IGEPGVGKTAIAEGLAQRIINGDVPESLKNRRLISLDLGSLVAGAKFRG 254



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>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 11/158 (6%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISL----GGVKDEADIRGHRRTYIGSMPGRLI 174
           L  VG  G GK+  A SIA   N   +++ +    GG+  E++ R  +            
Sbjct: 278 LLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAE------ 331

Query: 175 DGLKRVSVSNPVMLLDEIDK--TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 348
                 ++S  ++ +DEIDK  TGS+   D  +           + F      +    S 
Sbjct: 332 ------TISPCILWIDEIDKAFTGSNFNNDSGTT---------KRVFGTFITWLSEKKSP 376

Query: 349 VVFVATANRMQPIPPALL-----DRMEVIELPGYTPEE 447
           V  VATAN +  +PP LL     D +  I LP     E
Sbjct: 377 VFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERE 414



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>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)|
           (Clamp loader large subunit)
          Length = 479

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 31/94 (32%), Positives = 41/94 (43%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPGVGKTSL  +IA   N + I ++    +  +DI       I     R     KR   
Sbjct: 56  GPPGVGKTSLVEAIASEFNLEMIELNASDYRRRSDIE-----RIVGAASRKRSMFKR--- 107

Query: 199 SNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 300
              V+LLDE+D            ALL V+   +N
Sbjct: 108 -GVVILLDEVDGINPREDAGGIEALLSVIKTTEN 140



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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           +  VGPPG GKT LA +IA   +  F  ++     +          +IG    R+ D  K
Sbjct: 222 ILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVE---------MFIGIGAARVRDLFK 272

Query: 187 RVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVF 357
           + S + P ++ +DEID  G + RG    A +   + E+ +T N     +  F  +K V+ 
Sbjct: 273 KASENAPCIVFIDEIDAVGRE-RG----AGVGGGNDEREQTLNQLLTEMDGFKENKGVIV 327

Query: 358 VATANRMQPIPPALL-----DRMEVIELP 429
           V   NR   +  ALL     DR   + LP
Sbjct: 328 VGATNRADILDAALLRPGRFDRQVTVNLP 356



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>CLPB_CLOTE (Q898C7) Chaperone clpB|
          Length = 865

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++ K L       IRI +    ++  +    G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K   DV     +  L++LD
Sbjct: 669 TEAVRRKPYS--VILFDEIEKAHDDV----FNIFLQILD 701



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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 16/162 (9%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A      F  IS     +          ++G    R+ D  ++  
Sbjct: 200 VGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFEQAK 250

Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
            + P ++ +DEID            G+D R    + LL  +D  +  T            
Sbjct: 251 ANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNT------------ 298

Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
             ++ VA  NR   +  AL+     DR  V++ P Y    ++
Sbjct: 299 -GIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREI 339



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>CLPB_GLOVI (Q7NFE9) Chaperone clpB|
          Length = 872

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       +RI +    ++  +    G    Y+G    G+L
Sbjct: 610 FLGPTGVGKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQL 669

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DEI+K  +DV     + LL+VLD
Sbjct: 670 TEAVRRRPYA--VVLFDEIEKAHNDV----FNVLLQVLD 702



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +           RK I + +G +     I G +  Y 
Sbjct: 205 PVL--IGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKLIALDMGAL-----IAGSK--YR 255

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228
           G    RL   L  V+ S    V+ +DEI
Sbjct: 256 GEFEERLKAVLNEVTKSEGQIVLFIDEI 283



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>CLPB_CHLPN (Q7AJA9) Chaperone clpB|
          Length = 866

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162
           V  F+GP GVGKT LA ++A  L  K    +R  +    ++  I    G    Y+G    
Sbjct: 600 VFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVGYEEG 659

Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
           G L + L+R   S  V+L DEI+K   +V     + LL+V D
Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----LNILLQVFD 695



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>CLPB_DEIRA (Q9RVI3) Chaperone clpB|
          Length = 852

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L   +   +RI +    ++   A + G    Y+G    G+L
Sbjct: 593 FLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEEGGQL 652

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DEI+K   DV     + LL+VLD
Sbjct: 653 TEAVRRRPYA--VILFDEIEKAHPDV----FNVLLQVLD 685



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 10/54 (18%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRG 132
           PVL  +G PGVGKT++A  +A  +          ++K + + +G +   A  RG
Sbjct: 194 PVL--IGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIVSLEMGSLLAGAKFRG 245



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>CLPB_COREF (Q8FM94) Chaperone clpB|
          Length = 852

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++++ L    R  +RI +    ++   A + G    Y+G    G+L
Sbjct: 606 FLGPTGVGKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +   +L DE++K   DV       LL+VLD
Sbjct: 666 TEAVRRRPYT--TVLFDEVEKAHPDV----FDILLQVLD 698



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>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT +A + A   N  F++++   +          + +IG     + D  +    
Sbjct: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLV---------QMFIGDGAKLVRDAFQLAKE 261

Query: 199 SNP-VMLLDEIDKTG-----SDVRGD--PASALLEVLDPEQNKTFNDHYLNVPFDLSKVV 354
            +P ++ +DEID  G     S+V GD      +LE+L+     + +D          ++ 
Sbjct: 262 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD----------RIK 311

Query: 355 FVATANRMQPIPPAL-----LDRMEVIELPGYTPEEKLKI 459
            +A  NR   + PAL     LDR   IE P  T E + +I
Sbjct: 312 VIAATNRADILDPALMRSGRLDRK--IEFPHPTEEARARI 349



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>CLPB_HAEDU (Q7VNH1) Chaperone clpB|
          Length = 856

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L+ ++A  L       +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELSKTLANFLFDDENAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEQGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VVLLDEVEKAHPDV----FNILLQVLD 695



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>RUVB_BRUSU (Q8FZ02) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F R + G V  +A       T +       ID + R+
Sbjct: 57  FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115

Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369
           S +   +L   ++    D + G+  +A                  +V  DL+K   VA  
Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158

Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447
            R+  +   L DR  + + L  YT EE
Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185



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>RUVB_BRUME (Q8YIV5) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F R + G V  +A       T +       ID + R+
Sbjct: 57  FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115

Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369
           S +   +L   ++    D + G+  +A                  +V  DL+K   VA  
Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158

Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447
            R+  +   L DR  + + L  YT EE
Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185



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>RUVB_BRUAB (Q57BH8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F R + G V  +A       T +       ID + R+
Sbjct: 57  FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115

Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369
           S +   +L   ++    D + G+  +A                  +V  DL+K   VA  
Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158

Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447
            R+  +   L DR  + + L  YT EE
Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185



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>RUVB_BRUA2 (Q2YRD2) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F R + G V  +A       T +       ID + R+
Sbjct: 57  FVGPPGLGKTTLAQIMAKELGVNF-RSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 115

Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369
           S +   +L   ++    D + G+  +A                  +V  DL+K   VA  
Sbjct: 116 SPAVEEILYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLAKFTLVAAT 158

Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447
            R+  +   L DR  + + L  YT EE
Sbjct: 159 TRLGLLTTPLRDRFGIPVRLNFYTVEE 185



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>RUVB_AGRT5 (Q8U9K6) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F   S   +    D+              L+  L+  
Sbjct: 58  FVGPPGLGKTTLAQIMAKELGVNFKSTSGPVIAKAGDL------------AALLTNLE-- 103

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351
                V+ +DEI +           A+ E+L P       D  +       +V  DLSK 
Sbjct: 104 --ERDVLFIDEIHRLN--------PAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLSKF 153

Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447
             VA   R+  +   L DR  + + L  YT +E
Sbjct: 154 TLVAATTRLGLLTTPLRDRFGIPVRLAFYTVDE 186



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>RUVB_BARQU (Q6FYP6) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 361

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+L+  +AK L   F   S   +    D+              L+  L+  
Sbjct: 57  FVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKSGDL------------AALLTNLE-- 102

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351
                V+ +DEI +           A+ E+L P       D  L       +V  DL+K 
Sbjct: 103 --ERDVLFIDEIHRLN--------PAIEEILYPAMEDYQLDLILGEGPAARSVKIDLAKF 152

Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447
             VA   R+  +   L DR  + I L  YT EE
Sbjct: 153 TLVAATTRLGLLTTPLRDRFGIPIRLNFYTIEE 185



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>CLPB_BORPE (Q7VYV6) Chaperone clpB|
          Length = 865

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 609 FLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 669 TEAVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 701



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>CLPB_BORPA (Q7W9E6) Chaperone clpB|
          Length = 865

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 609 FLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 669 TEAVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 701



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>CLPB_BORBR (Q7WHB6) Chaperone clpB|
          Length = 865

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 609 FLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 669 TEAVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 701



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>CLPB_SHEON (Q8EBE6) Chaperone clpB|
          Length = 857

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  S+A+ L       +RI +    ++   + + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKSLARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          N++ + + +G +   A  RG     +
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
            ++   L     +V     ++ +DE+       +GD A     +L P
Sbjct: 260 KAVLNELAQEEGQV-----ILFIDELHTMVGAGKGDGAMDAGNMLKP 301



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>CLPB_WOLPM (Q73IE4) Chaperone clpB|
          Length = 853

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L       +R  +    ++  +    G    Y+G    GRL
Sbjct: 602 FLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRL 661

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R      V+L DEI+K   D+     + LL++LD  + +  + H      D    
Sbjct: 662 TEAVRRRPYQ--VILFDEIEKANPDI----FNLLLQILD--EGRLTDSH--GKLIDFRNT 711

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 712 ILILTSN 718



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>CLPB_BLOFL (Q7VQF3) Chaperone clpB|
          Length = 872

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIGSMPGR-L 171
           F+GP GVGKT L  ++++ L   +   +RI +    ++   + + G    YIG   G  L
Sbjct: 605 FLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGAYL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  ++LLDEI+K   DV     + LL+VLD +   T N   +    D +  
Sbjct: 665 TESIRRRPYS--IVLLDEIEKAHLDV----FNILLQVLD-DGRLTDNQGRM---VDFNNT 714

Query: 352 VFVATAN 372
           V + T+N
Sbjct: 715 VIIMTSN 721



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>CLPB_LISMO (Q8Y570) Chaperone clpB|
          Length = 866

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  +       IRI +    ++  +    G    YIG    G+L
Sbjct: 609 FLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYIGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++LLDEI+K   DV     + LL+VLD
Sbjct: 669 TEAVRRNPYS--IVLLDEIEKAHPDV----FNILLQVLD 701



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           PVL  +G PGVGKT++   +A+ + RK +     G+KD        +T I    G LI G
Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVP---EGLKD--------KTIISLDIGSLIAG 250

Query: 181 LK 186
            K
Sbjct: 251 AK 252



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>CLPB_LISIN (Q929G7) Chaperone clpB|
          Length = 866

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  +       IRI +    ++  +    G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++LLDEI+K   DV     + LL+VLD
Sbjct: 669 TEAVRRNPYS--IVLLDEIEKAHPDV----FNILLQVLD 701



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           PVL  +G PGVGKT++   +A+ + RK +     G+KD        +T I    G LI G
Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVP---EGLKD--------KTIISLDIGSLIAG 250

Query: 181 LK 186
            K
Sbjct: 251 AK 252



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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA   +  F  IS     +          ++G    R+ D  K+  
Sbjct: 193 VGPPGTGKTLLAKAIAGEASVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 243

Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
            + P ++ +DEID            G+D R    + LL  +D  +  T            
Sbjct: 244 QNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNT------------ 291

Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELP 429
             V+ +A  NR+  +  ALL     DR  ++ +P
Sbjct: 292 -GVIVIAATNRVDVLDAALLRPGRFDRQIMVSMP 324



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>RUVB_RHIME (Q92M92) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 346

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +AK L   F   S   +    D+              L+  L+  
Sbjct: 58  FVGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDL------------AALLTNLE-- 103

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351
                V+ +DEI +           A+ E+L P       D  +       +V  DL+K 
Sbjct: 104 --ERDVLFIDEIHRLN--------PAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKF 153

Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447
             VA   R+  +   L DR  + + L  YT EE
Sbjct: 154 TLVAATTRLGLLTTPLRDRFGIPVRLNFYTVEE 186



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>CLPB_MYCPN (P75247) Chaperone clpB|
          Length = 715

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+G  GVGKT LA S+A+ L    +  IR  +    ++   A + G    Y+G    G L
Sbjct: 464 FLGSTGVGKTELAKSLAEVLFDNEKAMIRFDMSEYMEKHSVAKLIGAPPGYVGYEQSGLL 523

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R      V+L DEI+K   DV     + LL+VLD
Sbjct: 524 TEAVRRKPYC--VLLFDEIEKAHPDV----TNILLQVLD 556



 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVK-DEADIRG--HRRTYIGSMPGRL 171
           PVL  +G PGVGKT++     + +    + ++L  V+  E  + G      Y G    R+
Sbjct: 56  PVL--IGEPGVGKTAIVEGFVRRVVNNDVPLNLRDVEIYELSLSGLIAGTQYQGEFEKRV 113

Query: 172 IDGLKRVSVSNP--VMLLDEI 228
              LK+V  SN   ++ +DEI
Sbjct: 114 NGILKQVKESNGKIILFIDEI 134



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>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A   +  F   S+GG             ++G    R+ D  +   
Sbjct: 209 VGPPGTGKTLLAKAVAGEAHVPF--FSMGG-------SSFIEMFVGLGASRVRDLFETAK 259

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP---FDLSKVVFVA 363
              P ++ +DEID  G   +   A  ++   D E+ +T N     +     + + V+ +A
Sbjct: 260 KQAPSIIFIDEIDAIG---KSRAAGGMISGND-EREQTLNQLLAEMDGFGSENAPVIVLA 315

Query: 364 TANRMQPIPPALL-----DRMEVIELPGY 435
             NR + + PAL+     DR  +++ P +
Sbjct: 316 ATNRPEILDPALMRPGRFDRQVLVDKPDF 344



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>CLPB_PHOLL (Q7N788) Chaperone clpB|
          Length = 857

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L   +   +RI +    ++   + + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K  SDV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHSDV----FNILLQVLD 695



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          N++ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>CLPB_CAMJE (Q9PI02) Chaperone clpB|
          Length = 857

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT  A ++AK L    +  IR  +    ++  +    G    YIG    G L
Sbjct: 606 FLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGEL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DE++K   DV     + LL +LD  +          V  D    
Sbjct: 666 TEAVRRKPYS--VLLFDEVEKAHKDV----FNVLLGILDDGRATDSK----GVTVDFKNT 715

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 716 IIILTSN 722



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVK-----DEADIRGHRRTYIGSMPG 165
           P+L  +G PGVGKT++  ++A+ + +K +  SL   K       A I G +  Y G    
Sbjct: 203 PIL--LGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIALDMSALIAGAK--YRGEFED 258

Query: 166 RLIDGLKRVSVS-NPVMLLDEI 228
           RL   +  V  S N ++ +DEI
Sbjct: 259 RLKAVVNEVIKSENIILFIDEI 280



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>CLPB_COXBU (Q83F55) Chaperone clpB|
          Length = 859

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       +RI +    ++   A + G    Y+G    G L
Sbjct: 605 FLGPTGVGKTELCKALAVFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDEI+K  +DV     + LL+VLD
Sbjct: 665 TEAIRRRPYS--VILLDEIEKAHNDV----FNVLLQVLD 697



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>CLPB_PLEBO (O87444) Chaperone clpB|
          Length = 873

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       +RI +    ++  +    G    Y+G    G+L
Sbjct: 610 FLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQL 669

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K   DV     + +L++LD
Sbjct: 670 TEAVRRRPYS--VILFDEIEKAHPDV----FNVMLQILD 702



 Score = 33.9 bits (76), Expect = 0.20
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +          +RK I + +G +     I G +  Y 
Sbjct: 205 PVL--IGEPGVGKTAIAEGLAQRILSGDVPQSLKDRKLIALDMGAL-----IAGAK--YR 255

Query: 151 GSMPGRLIDGLKRVSVS--NPVMLLDEI 228
           G    RL   LK V+ S  N ++ +DEI
Sbjct: 256 GEFEERLKAVLKEVTDSRGNIILFIDEI 283



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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      F + +  G +D           +G    R+ D   +   
Sbjct: 268 GPPGTGKTLLAKAVAGEAGVPFFQSTGSGFED---------MLVGVGAKRVRDLFNKAKK 318

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANR 375
           + P ++ +DEID  GS  RG    +   V++   N+   +  ++     + VV +A  NR
Sbjct: 319 AAPCIIFIDEIDSVGSK-RGRVELSSYSVVEQTLNQLLAE--MDGFTSRTGVVVMAATNR 375

Query: 376 MQPIPPALL-----DRMEVIELPGYTPEE 447
           +  +  ALL     DR   I LP     E
Sbjct: 376 LDVLDDALLRPGRFDRHIQINLPDIKERE 404



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>CLPB1_SYNY3 (P74459) Chaperone clpB 1|
          Length = 898

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       +RI +    ++   + + G    Y+G    G+L
Sbjct: 618 FMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 677

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 678 SEAVRRRPYS--VVLLDEVEKAHLDV----FNILLQVLD 710



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +          NR+ I + +G +     I G +  Y 
Sbjct: 204 PVL--IGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLISLDMGSL-----IAGAK--YR 254

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228
           G    RL   +K V+ S+   ++ +DE+
Sbjct: 255 GEFEERLRSVMKEVTNSDGQIILFIDEV 282



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>CLPB_STRMU (Q8DTC7) Chaperone clpB|
          Length = 860

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT+LA  +A+ L     + +R+ +    ++   + + G    Y+G    G+L
Sbjct: 601 FLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPPGYVGYEEGGQL 660

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + +++   S  ++LLDEI+K   DV     + LL+VLD
Sbjct: 661 TEAVRQRLYS--IVLLDEIEKAHPDV----FNTLLQVLD 693



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>RUVB_BARHE (Q6G5R1) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 361

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+L+  +AK L   F   S   +    D+              L+  L+  
Sbjct: 60  FVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKAGDL------------AALLTNLE-- 105

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL-------NVPFDLSKV 351
                V+ +DEI +         + A+ E+L P       D  +       +V  DL+K 
Sbjct: 106 --ERDVLFIDEIHRL--------SPAIEEILYPAMEDYQLDLIIGEGPAARSVKIDLAKF 155

Query: 352 VFVATANRMQPIPPALLDRMEV-IELPGYTPEE 447
             VA   R+  +   L DR  + I L  YT EE
Sbjct: 156 TLVAATTRLGLLTTPLRDRFGIPIRLNFYTIEE 188



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>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A   +  F   S+GG             ++G    R+ D  +   
Sbjct: 209 VGPPGTGKTLLAKAVAGEAHVPF--FSMGG-------SSFIEMFVGLGASRVRDLFETAK 259

Query: 196 VSNP-VMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVP---FDLSKVVFV 360
              P ++ +DEID  G S   G   S      + E+ +T N     +     + + V+ +
Sbjct: 260 KQAPSIIFIDEIDAIGKSRAAGGVVSG-----NDEREQTLNQLLAEMDGFGSENAPVIVL 314

Query: 361 ATANRMQPIPPALL-----DRMEVIELPGY 435
           A  NR + + PAL+     DR  +++ P +
Sbjct: 315 AATNRPEILDPALMRPGRFDRQVLVDKPDF 344



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>CLPB_GEOSL (Q74FF1) Chaperone clpB|
          Length = 865

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT  A ++A+ L   ++  +RI +   +++   A + G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++L DEI+K   +V     + LL+VLD
Sbjct: 669 TEAVRRRPYS--IVLFDEIEKAHPEV----FNVLLQVLD 701



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>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 183
           VL F GPPG GKT LA ++A      FI +    +  +         ++G     + +  
Sbjct: 489 VLLF-GPPGTGKTLLAKAVANESGANFISVKGPEIFSK---------WVGESEKAIREIF 538

Query: 184 KRVSVSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFV 360
           ++   S P ++  DEID        D +SA   V D   N+   +  L+   +   VV +
Sbjct: 539 RKARQSAPCIIFFDEIDAIAPKRGRDLSSA---VTDKVVNQLLTE--LDGMEEPKDVVVI 593

Query: 361 ATANRMQPIPPALL--DRME-VIELPGYTPEEKLKI 459
           A  NR   I PALL   R++ VI +P   P+EK ++
Sbjct: 594 AATNRPDIIDPALLRPGRLDRVILVP--VPDEKARL 627



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 6/144 (4%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A      F  I+   +  +         Y+G     L    +   
Sbjct: 219 VGPPGTGKTLLAKAVANEAGANFYVINGPEIMSK---------YVGETEENLRKIFEEAE 269

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372
            + P ++ +DEID      + D A+  +E     Q  T  D          +VV +   N
Sbjct: 270 ENAPSIIFIDEIDAIAP--KRDEATGEVERRLVAQLLTLMDGLKG----RGQVVVIGATN 323

Query: 373 RMQPIPPAL-----LDRMEVIELP 429
           R   + PAL      DR  VI +P
Sbjct: 324 RPNALDPALRRPGRFDREIVIGVP 347



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>CLPB_CHLTR (O84115) Chaperone clpB|
          Length = 867

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162
           V  F+GP GVGKT LA ++A+ L  K    IR  +    ++  +    G    Y+G    
Sbjct: 600 VFLFLGPTGVGKTELAKALAELLFNKEEAMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEG 659

Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
           G L + L+R   S  V+L DEI+K   +V     + LL++ D
Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----FNILLQIFD 695



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>CLPB_CHLMU (Q9PKS5) Chaperone clpB|
          Length = 867

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162
           V  F+GP GVGKT LA ++A+ L  K    IR  +    ++  +    G    Y+G    
Sbjct: 600 VFLFLGPTGVGKTELAKALAELLFNKEEAMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEG 659

Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
           G L + L+R   S  V+L DEI+K   +V     + LL++ D
Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----FNILLQIFD 695



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>RFCL_SULTO (Q975D4) Replication factor C large subunit (RFC large subunit)|
           (Clamp loader large subunit)
          Length = 440

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIR--GHRRTYIGSMPGRLIDGLKRV 192
           GPPGVGKT+LA ++A+    +   ++    ++  DIR    R +  G++ G         
Sbjct: 48  GPPGVGKTTLAEALARDYKLELFEMNASDSRNLNDIRTMAERASITGTIFG--------- 98

Query: 193 SVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            +   ++LLDE+D   +        A+LE+++
Sbjct: 99  -IKGKLILLDEVDGLNARADAGAIDAILELIN 129



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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      F + +  G +D           +G    R+ D   +   
Sbjct: 271 GPPGTGKTLLAKAVAGEAGVPFFQSTGSGFED---------MLVGVGAKRVRDLFNKAKK 321

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANR 375
           + P ++ +DEID  GS  RG    +   V++   N+   +  ++     + VV +A  NR
Sbjct: 322 AAPCIIFIDEIDSVGSK-RGRVELSSYSVVEQTLNQLLAE--MDGFTSRTGVVVMAATNR 378

Query: 376 MQPIPPALL-----DRMEVIELPGYTPEE 447
           +  +  ALL     DR   I LP     E
Sbjct: 379 LDVLDDALLRPGRFDRHIQINLPDIKERE 407



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>CLPB_LISMF (Q71XF9) Chaperone clpB|
          Length = 866

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  +       IRI +    ++  +    G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++LLDEI+K   DV     + LL+VLD
Sbjct: 669 TEAVRRNPYS--IVLLDEIEKAHPDV----FNILLQVLD 701



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 180
           PVL  +G PGVGKT++   +A+ + RK +     G+KD        +T I    G LI G
Sbjct: 204 PVL--IGEPGVGKTAIVEGLAQRIVRKDVP---EGLKD--------KTIISLDIGSLIAG 250

Query: 181 LK 186
            K
Sbjct: 251 AK 252



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>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A   +  F   S+GG             ++G    R+ D      
Sbjct: 215 VGPPGTGKTLLAKAVAGEASVPF--FSMGG-------SSFIEMFVGLGASRVRDLFDIAK 265

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP---FDLSKVVFVA 363
              P ++ +DEID  G   +   A  ++   D E+ +T N     +     + + V+ +A
Sbjct: 266 KEAPSIIFIDEIDAIG---KSRAAGGMISGND-EREQTLNQLLAEMDGFGSENAPVIVLA 321

Query: 364 TANRMQPIPPALL-----DRMEVIELPGY 435
             NR + + PALL     DR  +++ P +
Sbjct: 322 ATNRPEILDPALLRPGRFDRQVLVDKPDF 350



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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA + A   N  FI +S     +          ++G  P R+ D       
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLE---------MFVGVGPARVRDLFALARK 398

Query: 199 SNP-VMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD----LSKVVFV 360
           + P ++ +DEID  G    RG+           EQ  T N   L V  D     + VV +
Sbjct: 399 NAPCILFIDEIDAVGRKRGRGNFGG------QSEQENTLNQ--LLVEMDGFNTTTNVVIL 450

Query: 361 ATANRMQPIPPALL 402
           A  NR   + PALL
Sbjct: 451 AGTNRPDILDPALL 464



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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 16/156 (10%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F  IS     +          ++G    R+ D  K+  
Sbjct: 212 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE---------MFVGVGASRVRDLFKKAK 262

Query: 196 VSNP-VMLLDEIDKT----------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 342
            + P ++ +DEID            G+D R    + LL  +D  +  T            
Sbjct: 263 DNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNT------------ 310

Query: 343 SKVVFVATANRMQPIPPALL-----DRMEVIELPGY 435
             V+ +A  NR   +  ALL     DR   +++P +
Sbjct: 311 -GVIVIAATNRADILDSALLRPGRFDRQVSVDVPDF 345



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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      F  IS     +          ++G    R+ D  ++   
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTISGSDFVE---------MFVGVGASRVRDLFEQAKQ 253

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP--FDLSKVVFVATA 369
           ++P ++ +DEID  G   RG    A L     E+ +T N   + +    D + V+ +A  
Sbjct: 254 NSPCIIFVDEIDAVGRQ-RG----AGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAAT 308

Query: 370 NRMQPIPPALL 402
           NR   + PALL
Sbjct: 309 NRPDILDPALL 319



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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      F  IS     +          ++G    R+ D  ++   
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTISGSDFVE---------MFVGVGASRVRDLFEQAKQ 253

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP--FDLSKVVFVATA 369
           ++P ++ +DEID  G   RG    A L     E+ +T N   + +    D + V+ +A  
Sbjct: 254 NSPCIIFVDEIDAVGRQ-RG----AGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAAT 308

Query: 370 NRMQPIPPALL 402
           NR   + PALL
Sbjct: 309 NRPDILDPALL 319



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>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT L  ++A +    FIR++      +         Y+G  P  + D  +    
Sbjct: 207 GPPGTGKTMLVKAVANSTTASFIRVNGSEFVQK---------YLGEGPRMVRDVFRMARE 257

Query: 199 SNP-VMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 348
           ++P ++ +DEID         +TG+D   +    LLE+L+  Q   F           S 
Sbjct: 258 NSPAIIFIDEIDAIATKRFDAQTGAD--REVQRILLELLN--QMDGFEQS--------SN 305

Query: 349 VVFVATANRMQPIPPALL 402
           V  +   NR   + PALL
Sbjct: 306 VKVIMATNRADTLDPALL 323



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>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  F+R+    V  E       + Y+G  P +L+  L RV+ 
Sbjct: 225 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 274

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372
            +   ++ +DEID  G+  R D  S     +     +  N   L+       V  +   N
Sbjct: 275 EHAPSIVFIDEIDAVGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 331

Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456
           R++ + PAL+    +   IE P   P+EK K
Sbjct: 332 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 360



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>CLPB_PASMU (Q9CKC0) Chaperone clpB|
          Length = 855

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       +RI +    ++  +    G    Y+G    G L
Sbjct: 602 FLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 661

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 662 TEAVRRRPYS--VILLDEVEKAHHDV----FNILLQVLD 694



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>CLPB_RALSO (Q8XZR0) Chaperone clpB|
          Length = 862

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++  +    G    Y+G    G L
Sbjct: 606 FLGPTGVGKTELCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYL 665

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 666 TEAVRRKPYS--VVLLDEVEKAHPDV----FNILLQVLD 698



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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS- 195
           GPPG GKT LA ++A   +  FIR++   +  +         +IG    RL+  L  ++ 
Sbjct: 220 GPPGTGKTLLAKAVANHADATFIRLAAPELVQK---------FIGE-GARLVRELFELAR 269

Query: 196 -VSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVAT 366
             +  ++ +DEID  G+    D  S      D E  +T       +  FD L  +  +A 
Sbjct: 270 EKAPSIIFIDEIDAIGARRMRDATSG-----DREVQRTLTQLLAEMDGFDPLDDIKVIAA 324

Query: 367 ANRMQPIPPALL-----DRMEVIELP 429
            NR   + PALL     DR   I LP
Sbjct: 325 TNRKDILDPALLRPGRFDRHIKIPLP 350



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>CLPB_XYLFT (Q87AX8) Chaperone clpB|
          Length = 861

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIGSMPGRLI 174
           F+GP GVGKT L  ++A+ L       +RI +    ++   A + G    Y+G   G  +
Sbjct: 603 FLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662

Query: 175 DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
             L R    + ++LLDE++K  SDV     + LL+VLD
Sbjct: 663 TELVRRRPYS-LILLDEVEKAHSDV----FNILLQVLD 695



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>CLPB_XYLFA (Q9PGC1) Chaperone clpB|
          Length = 861

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIGSMPGRLI 174
           F+GP GVGKT L  ++A+ L       +RI +    ++   A + G    Y+G   G  +
Sbjct: 603 FLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662

Query: 175 DGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
             L R    + ++LLDE++K  SDV     + LL+VLD
Sbjct: 663 TELVRRRPYS-LILLDEVEKAHSDV----FNILLQVLD 695



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>HSP78_CANAL (Q96UX5) Heat shock protein 78, mitochondrial precursor|
          Length = 812

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP G GKT L  S+A+ L       +R  +   +++  I    G    Y+G    G L
Sbjct: 532 FLGPTGTGKTELTKSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGEL 591

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  V+L DE +K   D+    +  LL+VLD  +    + H   +  D    
Sbjct: 592 TEAVRRKPYS--VVLFDEFEKAHPDL----SKLLLQVLD--EGSLTDSHGKKI--DFKNT 641

Query: 352 VFVATANRMQPI 387
           + V T+N  Q I
Sbjct: 642 IIVMTSNIGQEI 653



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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA + A   N  FI +S     +          ++G  P R+ D       
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLE---------MFVGVGPARVRDLFALARK 397

Query: 199 SNP-VMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD----LSKVVFV 360
           + P ++ +DEID  G    RG+           EQ  T N   L V  D     + VV +
Sbjct: 398 NAPCILFIDEIDAVGRKRGRGNFGG------QSEQENTLNQ--LLVEMDGFNTTTNVVIL 449

Query: 361 ATANRMQPIPPALL 402
           A  NR   + PALL
Sbjct: 450 AGTNRPDILDPALL 463



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>CLPB_HELHP (Q7VJY3) Chaperone clpB|
          Length = 859

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT  A ++A+ L    +  +RI +    ++   + + G    Y+G    G L
Sbjct: 605 FLGPTGVGKTQCAKTLAEFLFDNAKSLVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGVL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R   S  ++L DE++K   DV     + LL+VLD  +          V  D S  
Sbjct: 665 TEAIRRKPYS--IVLFDEVEKAHPDV----FNILLQVLDDGRLTDSK----GVSVDFSNT 714

Query: 352 VFVATAN 372
           + + T+N
Sbjct: 715 IIILTSN 721



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           P+L  +G PGVGKT++   +A+ +          N+K I + +  +   A  RG     +
Sbjct: 202 PIL--LGEPGVGKTAVVEGLAQRIVAKAVPTSLQNKKLIALDMSALIAGAKYRGEFEERL 259

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEI 228
            +    ++D +K+    N ++ +DEI
Sbjct: 260 KN----VVDEVKK--AGNIILFIDEI 279



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>CLPB2_SYNP7 (O34209) Chaperone clpB 2|
          Length = 895

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       IR  +    ++  I    G    YIG    G+L
Sbjct: 615 FLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLIGAPPGYIGYEEGGQL 674

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DE++K   DV     + LL+VLD
Sbjct: 675 SEAIRRHPYA--VVLFDEVEKAHPDV----FNLLLQVLD 707



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +           R+ I + +G +     I G +  Y 
Sbjct: 206 PVL--IGEPGVGKTAIAEGLAQRIVAGEVPDSLKQRRLISLDMGSL-----IAGAK--YR 256

Query: 151 GSMPGRLIDGLKRVSVSN--PVMLLDEIDKTGSDVRGDPASAL 273
           G    RL   L  V+ S+   V+ +DE+        G   SA+
Sbjct: 257 GEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAM 299



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>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++AK     FI I +  + D+         + G    +++D +   S+
Sbjct: 133 GPPGCGKTMLAKALAKESGANFISIRMSSIMDK---------WYGE-SNKIVDAM--FSL 180

Query: 199 SNP----VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL---SKVVF 357
           +N     ++ +DEID   S +R   ++      D E   T    ++ +   L    +V+ 
Sbjct: 181 ANKLQPCIIFIDEID---SFLRERSST------DHEVTATLKAEFMTLWDGLLNNGRVMI 231

Query: 358 VATANRMQPIPPALLDRME---VIELPGYTPEEKL 453
           +   NR+  I  A L R+    ++ LPG     K+
Sbjct: 232 IGATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKI 266



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>CLPB_RHOBA (Q7UM33) Chaperone clpB|
          Length = 881

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A+ +       +RI +    +   +    G    Y+G    G+L
Sbjct: 626 FLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRLIGAPPGYVGYEEGGKL 685

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+LLDE++K   DV     + LL+VLD
Sbjct: 686 TEAVRRRPYA--VILLDEMEKAHPDV----FNVLLQVLD 718



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A  +           +K + + +G +   A  RG     +
Sbjct: 203 PVL--IGQPGVGKTAIAEGLALRIFEGDVPQSLKGKKVVSLDMGALVAGAKFRGDFEERL 260

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 294
            S+   + D   +V     ++ +DE+         + ++    +L PE
Sbjct: 261 KSVLREVKDSDGKV-----ILFIDELHLVVGAGNAEGSADAANLLKPE 303



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>CLPB_XANCP (Q8P6A0) Chaperone clpB|
          Length = 861

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++LLDE++K  +DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--LILLDEVEKAHADV----FNILLQVLD 695



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>CLPB_VIBCH (Q9KU18) Chaperone clpB|
          Length = 857

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       +R+ +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695



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>CLPB_SHIFL (Q7UBW5) Chaperone clpB|
          Length = 857

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +           R+ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>CLPB_FUSNN (Q8RHQ8) Chaperone clpB|
          Length = 857

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       +RI +    D+  +    G    Y+G    G+L
Sbjct: 604 FLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQL 663

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++    S  V+L DEI+K   DV     + LL+VLD
Sbjct: 664 TEAIRTKPYS--VILFDEIEKAHPDV----FNVLLQVLD 696



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           P+L  +G PGVGKT++   +A+ +          N+K   + +G +   A        Y 
Sbjct: 200 PIL--IGEPGVGKTAIVEGLAQRILNGDVPESLKNKKIFSLDMGALVAGA-------KYK 250

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228
           G    R+   LK V  SN   ++ +DEI
Sbjct: 251 GEFEERMKGVLKEVEESNGNIILFIDEI 278



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>CLPB_ECOLI (P63284) Chaperone clpB (Heat-shock protein F84.1)|
          Length = 857

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +           R+ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>CLPB_ECOL6 (P63286) Chaperone clpB|
          Length = 857

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +           R+ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>CLPB_ECO57 (P63285) Chaperone clpB|
          Length = 857

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +           R+ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 46/146 (31%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS- 195
           GPPG GKT LA ++A   N  FI+I    V  E       R YIG    RL+ G+  ++ 
Sbjct: 192 GPPGTGKTLLAKAVAHETNATFIKI----VASE-----FVRKYIGE-GARLVRGVFELAK 241

Query: 196 -VSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK--VVFVAT 366
             S  ++ +DEID   +       S      D E  +T       +    S+  V  VA 
Sbjct: 242 EKSPSIIFIDEIDAVAAKRLKSSTSG-----DREVQRTLMQLLAELDGFESRGNVGIVAA 296

Query: 367 ANRMQPIPPALL-----DRMEVIELP 429
            NR   + PALL     DR   + LP
Sbjct: 297 TNRPDILDPALLRPGRFDRFIEVPLP 322



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>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   + KFIR+S   +  +         YIG    R++  L  ++ 
Sbjct: 189 GPPGTGKTLLARAVAHHTDCKFIRVSGAELVQK---------YIGE-GSRMVRELFVMAR 238

Query: 199 SN--PVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVA 363
            +   ++ +DEID  GS  V G          D E  +T  +    +  F+ SK +  + 
Sbjct: 239 EHAPSIIFMDEIDSIGSTRVEGSGGG------DSEVQRTMLELLNQLDGFETSKNIKIIM 292

Query: 364 TANRMQPIPPALL 402
             NR+  + PALL
Sbjct: 293 ATNRLDILDPALL 305



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>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  F+R+    V  E       + Y+G  P +L+  L RV+ 
Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372
            +   ++ +DEID  G+  R D  S     +     +  N   L+       V  +   N
Sbjct: 276 EHAPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332

Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456
           R++ + PAL+    +   IE P   P+EK K
Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361



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>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  F+R+    V  E       + Y+G  P +L+  L RV+ 
Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372
            +   ++ +DEID  G+  R D  S     +     +  N   L+       V  +   N
Sbjct: 276 EHAPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332

Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456
           R++ + PAL+    +   IE P   P+EK K
Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361



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>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  F+R+    V  E       + Y+G  P +L+  L RV+ 
Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372
            +   ++ +DEID  G+  R D  S     +     +  N   L+       V  +   N
Sbjct: 276 EHAPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332

Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456
           R++ + PAL+    +   IE P   P+EK K
Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361



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>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  F+R+    V  E       + Y+G  P +L+  L RV+ 
Sbjct: 226 GPPGTGKTLLAKAVANQTSATFLRV----VGSEL-----IQKYLGDGP-KLVRELFRVAE 275

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATAN 372
            +   ++ +DEID  G+  R D  S     +     +  N   L+       V  +   N
Sbjct: 276 EHGPSIVFIDEIDAIGTK-RYDSNSGGEREIQRTMLELLNQ--LDGFDSRGDVKVIMATN 332

Query: 373 RMQPIPPALLDRMEV---IELPGYTPEEKLK 456
           R++ + PAL+    +   IE P   P+EK K
Sbjct: 333 RIETLDPALIRPGRIDRKIEFP--LPDEKTK 361



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>RUVB_RHOPA (P61536) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 349

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 192
           FVGPPG+GKT+LA  +A+ L   F R + G V  +A       T +       ID + R+
Sbjct: 59  FVGPPGLGKTTLAQIVARELGVGF-RATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 117

Query: 193 SVSNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATA 369
           S S   +L   ++    D + G+  +A                  +V  DLSK   V   
Sbjct: 118 SPSVEEVLYPAMEDFQLDLIIGEGPAA-----------------RSVKIDLSKFTLVGAT 160

Query: 370 NRMQPIPPALLDRMEV-IELPGYTPEE 447
            R   +   L DR  + I L  YT EE
Sbjct: 161 TRAGLLTNPLRDRFGIPIRLNFYTIEE 187



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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA ++A      F  IS     +          ++G    R+ D  +   
Sbjct: 205 VGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE---------MFVGVGASRVRDLFENAK 255

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
            + P ++ +DEID  G   RG    A L     E+ +T N   + +  F  ++ ++ +A 
Sbjct: 256 KNAPCIIFIDEIDAVGRQ-RG----AGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAA 310

Query: 367 ANRMQPIPPALL-----DRMEVIELPGYT-PEEKLKI 459
            NR   + PALL     DR   +  P     EE LK+
Sbjct: 311 TNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKV 347



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>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   + KFIR+S   +  +         YIG    R++  L  ++ 
Sbjct: 186 GPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK---------YIGE-GSRMVRELFVMAR 235

Query: 199 SN--PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSKVVFVATA 369
            +   ++ +DEID  GS  R D +       D E  +T  +    +  F+ +K + V  A
Sbjct: 236 EHAPSIIFMDEIDSIGSS-RSDSSGG---SGDSEVQRTMLELLNQLDGFEATKNIKVIMA 291

Query: 370 -NRMQPIPPALLDRMEV---IELPGYTPEEKLKI 459
            NR+  + PALL    +   IE P  + E + +I
Sbjct: 292 TNRIDILDPALLRPGRIDRKIEFPPPSAEARAEI 325



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>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  FIR+    V  E       + Y+G  P RL+  + R++ 
Sbjct: 191 GPPGTGKTMLAKAVAHHTSAAFIRV----VGSE-----FVQKYLGEGP-RLVRDVFRLAR 240

Query: 199 SN--PVMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345
            N   ++ +DEID         +TG+D   +    L+E+L+               FD+S
Sbjct: 241 ENSPAIIFIDEIDAIATKRFDAQTGAD--REVQRILMELLNQMDG-----------FDVS 287

Query: 346 -KVVFVATANRMQPIPPALL 402
             V  +   NR   + PALL
Sbjct: 288 VNVKVIMATNRQDTLDPALL 307



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>CLPB_CLOPE (Q8XKG8) Chaperone clpB|
          Length = 866

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A+ L       +RI +    ++   + + G    Y+G    G+L
Sbjct: 610 FLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGPPPGYVGYEEGGQL 669

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K   DV     +  L++LD
Sbjct: 670 TEAVRRNPYS--VILFDEIEKAHDDV----FNLFLQILD 702



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>CLPB_NITEU (Q82SD8) Chaperone clpB|
          Length = 863

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IR+ +    ++   A + G    Y+G    G L
Sbjct: 608 FLGPTGVGKTELCKALAGFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 667

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 668 TEQVRRKPYS--VILLDEVEKAHPDV----FNVLLQVLD 700



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>CLPB_PORGI (Q7MVE7) Chaperone clpB|
          Length = 863

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+G  GVGKT LA ++A+ L        RI +   +++     + G    Y+G    G+L
Sbjct: 601 FLGTTGVGKTELARALAELLFDDESMLTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQL 660

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 327
            + ++R   S  V+L DEI+K   DV     + LL+VLD  +      H +N
Sbjct: 661 TEAIRRKPYS--VVLFDEIEKAHPDV----FNVLLQVLDDGRLTDNKGHVVN 706



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>CLPB_AGRT5 (Q7CU92) Chaperone clpB|
          Length = 874

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  S+A+ L       +R+ +    ++   A + G    Y+G    G L
Sbjct: 605 FLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGAL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R      V+L DEI+K   DV     + LL+VLD
Sbjct: 665 TEAVRRRPYQ--VVLFDEIEKAHPDV----FNVLLQVLD 697



 Score = 28.5 bits (62), Expect = 8.6
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A  +          ++K + + +G +     I G +  Y 
Sbjct: 203 PVL--IGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMALDMGAL-----IAGAK--YR 253

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEIDKTGSDVRGDPASALLEVLDP 291
           G    RL   L  V   N   ++ +DE+       + D A     +L P
Sbjct: 254 GEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLLKP 302



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>CLPB1_SYNP7 (P53533) Chaperone clpB 1|
          Length = 874

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT LA ++A  L       IRI +    ++   + + G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+L DEI+K   DV     + +L++LD
Sbjct: 669 TEAVRRRPYS--VILFDEIEKAHPDV----FNVMLQILD 701



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++A  +A+ +          +R+ I + +G +   A  R       
Sbjct: 204 PVL--IGEPGVGKTAIAEGLAQRIINGDVPQSLKDRRLIALDMGALIAGAKFR------- 254

Query: 151 GSMPGRLIDGLKRVSVSNPVMLL--DEI 228
           G    RL   LK V+ S  +++L  DEI
Sbjct: 255 GEFEERLKAVLKEVTDSEGIIILFIDEI 282



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>CLPB_XANAC (Q8PHQ4) Chaperone clpB|
          Length = 861

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  ++LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--LILLDEVEKAHPDV----FNILLQVLD 695



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>CLPB_YERPE (Q74X11) Chaperone clpB|
          Length = 857

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



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>CLPB_VIBVY (Q7MNK1) Chaperone clpB|
          Length = 857

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695



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>CLPB_VIBVU (Q8DEV2) Chaperone clpB|
          Length = 857

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695



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>CLPB_VIBPA (Q87S63) Chaperone clpB|
          Length = 857

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 695



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>CLPB_PHOPR (Q6LMY0) Chaperone clpB|
          Length = 857

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +       +RI +    ++   A + G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKTLANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



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>RFCL_PICTO (Q6L0P4) Replication factor C large subunit (RFC large subunit)|
           (Clamp loader large subunit)
          Length = 410

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           L   G PG GKT+ AT IA  LN   I ++     DE +    +R  +  M     D L 
Sbjct: 42  LILYGDPGTGKTTTATVIANYLNVPLIEMN---ASDERNADSMKR--VALMSSLYSDLLS 96

Query: 187 RVSVSNPVMLLDEID--------KTGSDVRGDPASALLEVLDPEQNK---TFNDHY 321
              + + ++L+DE D        K G D  G   + LL V+   +N    T ND+Y
Sbjct: 97  ERRIPDRLILIDEADNIFESRDPKRGGDYGG--ITELLNVVKETRNPVIITMNDYY 150



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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      F  IS     +          ++G    R+ D  +    
Sbjct: 233 GPPGTGKTLLAKAVAGEAGVPFYSISGSDFVE---------MFVGVGASRVRDLFENAKK 283

Query: 199 SNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV---PFDLSKVVFVAT 366
           + P ++ +DEID  G   RG    A L   + E+ +T N   + +     D + V+ +A 
Sbjct: 284 TAPSIIFIDEIDAVGRQ-RG----AGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAA 338

Query: 367 ANRMQPIPPALL 402
            NR   + PALL
Sbjct: 339 TNRSDVLDPALL 350



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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   N  FI +       +    G R      +   L +  KR + 
Sbjct: 175 GPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGAR------IVRELFEMAKRKAP 228

Query: 199 SNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FD-LSKVVFVATAN 372
           S  ++ +DEID  G+       S   E+      +T       +  FD L  V  +A  N
Sbjct: 229 S--IIFIDEIDAIGAKRIDIGTSGEREI-----QRTLMQLLAELDGFDPLDNVKIIAATN 281

Query: 373 RMQPIPPALL-----DRMEVIELPGY 435
           R+  + PALL     DR+  + LP +
Sbjct: 282 RIDILDPALLRPGRFDRIIEVPLPDF 307



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>CLPB_CHLCV (Q822Q4) Chaperone clpB|
          Length = 864

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
 Frame = +1

Query: 4   VLCFVGPPGVGKTSLATSIAKALNRK---FIRISLGGVKDEADIR---GHRRTYIG-SMP 162
           V  F+GP GVGKT LA ++A  L  K    +R  +    ++  +    G    Y+G    
Sbjct: 600 VFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEG 659

Query: 163 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
           G L + L+R   S  V+L DEI+K   +V     + LL++ D
Sbjct: 660 GSLSEALRRRPYS--VVLFDEIEKADKEV----FNILLQIFD 695



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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
 Frame = +1

Query: 16  VGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVS 195
           VGPPG GKT LA +IA      F   + G   DE          +G    R+ D   +  
Sbjct: 240 VGPPGTGKTLLARAIAGEAQVPFFH-TAGSEFDE--------VLVGQGARRVRDLFDKAK 290

Query: 196 VSNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP-FDLSK-VVFVAT 366
              P ++ +DEID  GS         +   + P  N+T N     +  F  ++ ++ +A 
Sbjct: 291 ARAPCIIFIDEIDSVGS-------KRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAA 343

Query: 367 ANRMQPIPPALL 402
            NR+  +  ALL
Sbjct: 344 TNRVDDLDKALL 355



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>CLP_TRYBB (P31543) Heat shock protein 100 (CLP protein)|
          Length = 868

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L    +  +RI +    ++  +    G    YIG    G+L
Sbjct: 601 FLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHDEGGQL 660

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R    + V+L DE++K   +V     + LL+VLD  +        +    D S  
Sbjct: 661 TEPVRR--RPHAVVLFDEVEKAHPNV----YNVLLQVLDDGRLTDSRGRTV----DFSNT 710

Query: 352 VFVATAN 372
           + V T+N
Sbjct: 711 IIVMTSN 717



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAK----------ALNRKFIRISLGGVKDEADIRGHRRTYI 150
           P+L  +G PGVGKT++A  IA+           LN +   + LG +   + +RG     +
Sbjct: 200 PIL--IGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLFSLDLGALIAGSSLRGEFEERL 257

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEI 228
            S+   +     + S +  ++ +DEI
Sbjct: 258 KSVLNEV-----KESSNGVILFIDEI 278



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>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      FIR+    V  E       + Y+G  P  + D  +    
Sbjct: 202 GPPGCGKTMLAKAVAANTAASFIRV----VGSE-----FVQKYLGEGPRMVRDVFRLAKE 252

Query: 199 SNP-VMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS- 345
           ++P ++ +DEID         +TG+D   +    LLE+L+               FD S 
Sbjct: 253 NSPSIIFIDEIDAIATKRFDAQTGAD--REVQRILLELLNQMDG-----------FDQST 299

Query: 346 KVVFVATANRMQPIPPALL 402
            V  +   NR   + PALL
Sbjct: 300 NVKVIMATNRQDTLDPALL 318



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>CLPB_BDEBA (Q6MIV0) Chaperone clpB|
          Length = 855

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT    ++A+ L    +  +RI +    ++   + + G    Y+G    G+L
Sbjct: 605 FLGPTGVGKTETVKALAEFLFDDEQAVVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 664

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 665 TESVRRRPYS--VVLLDEVEKAHPDV----FNILLQVLD 697



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVK-----DEADIRGHRRTYIGSMPG 165
           PVL  +G PGVGKT++A  +A  + ++ +  +L G K       A I G +  Y G    
Sbjct: 198 PVL--IGEPGVGKTAIAEGLALRIIKQDVPDNLIGKKLMSLDMGALIAGAK--YRGEFED 253

Query: 166 RLIDGLKRVSVSNP--VMLLDEI 228
           RL   +K V+ S+   ++ +DE+
Sbjct: 254 RLKAVIKEVTSSDGQIILFIDEL 276



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>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 13/160 (8%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT +A + A   N  F++++   +          + +IG     + D       
Sbjct: 207 GPPGTGKTLMARACAAQTNATFLKLAGPQLV---------QMFIGDGAKLVRDAFLLAKE 257

Query: 199 SNP-VMLLDEIDKTG-----SDVRGD--PASALLEVLDPEQNKTFNDHYLNVPFDLSKVV 354
            +P ++ +DEID  G     S+V GD      +LE+L+     + +D          ++ 
Sbjct: 258 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD----------RIK 307

Query: 355 FVATANRMQPIPPAL-----LDRMEVIELPGYTPEEKLKI 459
            +A  NR   + PAL     LDR   IE P  T E + +I
Sbjct: 308 VIAATNRADILDPALMRSGRLDRK--IEFPHPTEEARGRI 345



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>CLPB_NEIMB (Q9JYQ8) Chaperone clpB|
          Length = 859

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 607 FLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 667 TEQVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 699



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>CLPB_NEIMA (Q9JTP9) Chaperone clpB|
          Length = 859

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDE---ADIRGHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L       IRI +    ++   A + G    Y+G    G L
Sbjct: 607 FLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYL 666

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 667 TEQVRRKPYS--VILLDEVEKAHPDV----FNILLQVLD 699



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>CLPB_SALTY (Q7CQ01) Chaperone clpB|
          Length = 857

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +           R+ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>CLPB_SALTI (Q7AMH5) Chaperone clpB|
          Length = 857

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  +   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   S  V+LLDE++K   DV     + LL+VLD
Sbjct: 663 TEAVRRRPYS--VILLDEVEKAHPDV----FNILLQVLD 695



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +           R+ + + +G +   A  RG    + 
Sbjct: 202 PVL--IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE---FE 256

Query: 151 GSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDP 291
             + G L D  K+    N ++ +DE+       + D A     +L P
Sbjct: 257 ERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301



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>CLPB_PROMM (Q7V8B1) Chaperone clpB|
          Length = 865

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L+ ++A  L       +RI +    ++  +    G    Y+G    G+L
Sbjct: 609 FLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLIGAPPGYVGYEAGGQL 668

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
            + ++R   +  V+L DE++K   DV     + +L++LD
Sbjct: 669 TEAVRRRPYA--VILFDEVEKAHQDV----FNVMLQILD 701



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   PVLCFVGPPGVGKTSLATSIAKAL----------NRKFIRISLGGVKDEADIRGHRRTYI 150
           PVL  +G PGVGKT++   +A+ +          NR+ I + +G +     I G +  Y 
Sbjct: 203 PVL--IGEPGVGKTAIVEGLAQRIVNGDVPAALQNRQLITLDMGAL-----IAGAK--YR 253

Query: 151 GSMPGRLIDGLKRVSVSNP--VMLLDEI 228
           G    RL   LK V+ S    V+ +DEI
Sbjct: 254 GEFEERLKAVLKEVTASEGQIVLFIDEI 281



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>CLPB_TREPA (O83110) Chaperone clpB|
          Length = 878

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPG 165
           LC VGP GVGKT LA ++A  L    R   RI +    ++  I    G    Y+G    G
Sbjct: 606 LC-VGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGYDEGG 664

Query: 166 RLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLD 288
           +L + ++R   S  V+L DE++K   DV     +  L++LD
Sbjct: 665 QLTEAVRRRPYS--VLLFDEVEKAHQDV----FNIFLQILD 699



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>CLPB_BRUME (Q8YJ91) Chaperone clpB|
          Length = 874

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
 Frame = +1

Query: 13  FVGPPGVGKTSLATSIAKAL---NRKFIRISLGGVKDEADIR---GHRRTYIG-SMPGRL 171
           F+GP GVGKT L  ++A  L   +   +RI +    ++  +    G    Y+G    G L
Sbjct: 603 FLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVL 662

Query: 172 IDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 351
            + ++R      V+L DEI+K   DV     + LL+VLD  +      H +    D    
Sbjct: 663 TEAVRRRPYQ--VILFDEIEKAHPDV----FNVLLQVLDDGRLTDGQGHTV----DFRNT 712

Query: 352 VFVATAN 372
           V + T+N
Sbjct: 713 VIIMTSN 719



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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 16/161 (9%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHR--RTYIGSMPGRLIDGLKRV 192
           GPPG GKT +A ++A   N  FI            +RG +    ++G     +    ++ 
Sbjct: 503 GPPGTGKTLMAKAVANETNANFI-----------SVRGPQLLSKWVGESEKAIRQTFRKA 551

Query: 193 -SVSNPVMLLDEIDKT--------GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 345
             V+  V+  DE+D          G++V     + LL  LD  +             ++ 
Sbjct: 552 RQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLE-------------EME 598

Query: 346 KVVFVATANRMQPIPPALL-----DRMEVIELPGYTPEEKL 453
           +V+ +A  NR   I PAL+     DR+  +  PG    E++
Sbjct: 599 EVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQI 639



 Score = 35.0 bits (79), Expect = 0.092
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A   +  F  I+   +  +         Y G    +L +  +    
Sbjct: 230 GPPGTGKTLLAKAVANETSASFFSIAGPEIISK---------YYGESEQQLREIFEDAKD 280

Query: 199 SNP-VMLLDEIDKTG---SDVRGD----PASALLEVLDPEQNKTFNDHYLNVPFDLSKVV 354
            +P ++ +DE+D       DV G+      + LL ++D  + +              +V+
Sbjct: 281 DSPSIIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLEGR-------------GQVI 327

Query: 355 FVATANRMQPIPPAL 399
            +A  NR+  + PAL
Sbjct: 328 VIAATNRVDAVDPAL 342



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>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
 Frame = +1

Query: 19  GPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSV 198
           GPPG GKT LA ++A      FIR+    V  E       + Y+G  P  + D  +    
Sbjct: 203 GPPGCGKTMLANAVAHHTTAAFIRV----VGSE-----FVQKYLGEGPRMVRDVFRLAKE 253

Query: 199 SNP-VMLLDEID---------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 348
           ++P ++ +DEID         +TG+D   +    LLE+L+  Q   F+          + 
Sbjct: 254 NSPAIIFIDEIDAIATKRFDAQTGAD--REVQRILLELLN--QMDGFD--------QTTN 301

Query: 349 VVFVATANRMQPIPPALL 402
           V  +   NR   + PALL
Sbjct: 302 VKVIMATNRADTLDPALL 319



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>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 12/161 (7%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           +   GPPG GKT +A +IA   +  F  +S   +  +   RG     +     RL+  L 
Sbjct: 229 MVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSK--WRGDSEKIV-----RLLFELA 281

Query: 187 RVSVSNPVMLLDEIDKTGSDVRGDPA---------SALLEVLDPEQNKTFNDHYLNVPFD 339
           R    + ++ +DEID  G   RG+           S  L  +D  QNK          FD
Sbjct: 282 RFYAPS-IIFIDEIDTLGGQ-RGNSGEHEASRRVKSEFLVQMDGSQNK----------FD 329

Query: 340 LSKVVFVATANRMQPIPPALLDRME---VIELPGYTPEEKL 453
             +V  +A  N    +  AL  R E    I LP     +KL
Sbjct: 330 SRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKL 370



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>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 16/167 (9%)
 Frame = +1

Query: 7   LCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 186
           L   GPPG GKTSL  ++ +  +   I +S   V          R + G     L +   
Sbjct: 59  LLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSV---------HRAHAGESEKVLREAFA 109

Query: 187 R-----VSVSNPVMLLDEID--------KTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 327
                 VS    V+ +DEID        +   DVR   AS L  ++D  +  +       
Sbjct: 110 EASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVR--IASQLFTLMDSNKPSS------- 160

Query: 328 VPFDLSKVVFVATANRMQPIPPAL--LDRME-VIELPGYTPEEKLKI 459
                 +VV VA+ NR+  I PAL    R + ++E+     E++LKI
Sbjct: 161 ---SAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKI 204


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,774,486
Number of Sequences: 219361
Number of extensions: 1327431
Number of successful extensions: 7004
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 6543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6944
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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