ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdg05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds Length = 3143 Score = 753 bits (380), Expect = 0.0 Identities = 440/460 (95%) Strand = Plus / Plus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 1265 ccagtgctgtgttttgtggggccacctggtgttggaaagacatctttggctacatccata 1324 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1325 gcaaaggccctaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggct 1384 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 |||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||| Sbjct: 1385 gatattaggggccatcgaagaacgtacattggaagcatgccagggcgcctcattgatgga 1444 Query: 181 ctaaagagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggt 240 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 1445 ctaaagagggtatctgtcaacaacccagtgatgctccttgacgaaattgacaagactggt 1504 Query: 241 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1505 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaac 1564 Query: 301 aaaacattcaatgaccactatttgaatgttccgtttgacctgtcaaaggttgtgtttgtt 360 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1565 aaaacattcaatgaccactatttgaatgttccatttgacctgtcgaaggttgtatttgtt 1624 Query: 361 gcaactgccaacaggatgcaacctatcccccctgctctgttagataggatggaagtcatc 420 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1625 gcaactgccaacaggatgcaacctatcccccctgccctgttagataggatggaagtcatt 1684 Query: 421 gaactaccaggctacacgcctgaagaaaagctgaaaatag 460 || |||||||||||||||||||||||||||||||||||| Sbjct: 1685 gagttaccaggctacacgcctgaagaaaagctgaaaatag 1724
>gb|DQ002905.1| Oryza sativa (indica cultivar-group) lon protease lon1a (lon1) mRNA, complete sequence, alternatively spliced Length = 2986 Score = 595 bits (300), Expect = e-167 Identities = 420/460 (91%) Strand = Plus / Plus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || ||||||||||||||||||||||||||||||||||| || || | || ||| Sbjct: 1395 ccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgata 1454 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1455 gcaaaggcactagataggaagttcataagaatctctcttggtggtgtaaaggatgaggct 1514 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1515 gatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatgga 1574 Query: 181 ctaaagagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggt 240 |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1575 ctaaagagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggt 1634 Query: 241 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaat 300 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1635 tctgatgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaat 1694 Query: 301 aaaacattcaatgaccactatttgaatgttccgtttgacctgtcaaaggttgtgtttgtt 360 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 1695 aaaacgttcaacgatcactatttgaatgttccatttgacctgtcgaaggtcatatttgtt 1754 Query: 361 gcaactgccaacaggatgcaacctatcccccctgctctgttagataggatggaagtcatc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 1755 gcaactgccaacaggatgcaacccatcccccctcctctgttagataggatggaagttatt 1814 Query: 421 gaactaccaggctacacgcctgaagaaaagctgaaaatag 460 || |||||||| |||||||||||||| ||||| ||||||| Sbjct: 1815 gagctaccaggttacacgcctgaagagaagctaaaaatag 1854
>gb|AY129070.1| Oryza sativa (indica cultivar-group) Lon protease (Lon1) mRNA, complete cds Length = 2908 Score = 595 bits (300), Expect = e-167 Identities = 420/460 (91%) Strand = Plus / Plus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || ||||||||||||||||||||||||||||||||||| || || | || ||| Sbjct: 1317 ccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgata 1376 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1377 gcaaaggcactagataggaagttcataagaatctctcttggtggtgtaaaggatgaggct 1436 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1437 gatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatgga 1496 Query: 181 ctaaagagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggt 240 |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1497 ctaaagagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggt 1556 Query: 241 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaat 300 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1557 tctgatgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaat 1616 Query: 301 aaaacattcaatgaccactatttgaatgttccgtttgacctgtcaaaggttgtgtttgtt 360 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 1617 aaaacgttcaacgatcactatttgaatgttccatttgacctgtcgaaggtcatatttgtt 1676 Query: 361 gcaactgccaacaggatgcaacctatcccccctgctctgttagataggatggaagtcatc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 1677 gcaactgccaacaggatgcaacccatcccccctcctctgttagataggatggaagttatt 1736 Query: 421 gaactaccaggctacacgcctgaagaaaagctgaaaatag 460 || |||||||| |||||||||||||| ||||| ||||||| Sbjct: 1737 gagctaccaggttacacgcctgaagagaagctaaaaatag 1776
>gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA, complete cds Length = 3207 Score = 587 bits (296), Expect = e-164 Identities = 419/460 (91%) Strand = Plus / Plus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || |||||||||||||||||||| ||||| ||||||||||||||| | || ||| Sbjct: 1226 ccagtgctgtgttttgtgggaccacctggcgttgggaagacatctttggcttcctccata 1285 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1286 gcgaaggccctgaacaggaagttcataagaatctctcttggtggtgtaaaggatgaagct 1345 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 ||||| ||||| || ||||||||||||||||||||||||||||| | || || |||||| Sbjct: 1346 gatatcaggggtcaccgaaggacatacattggaagcatgccagggagacttattgatgga 1405 Query: 181 ctaaagagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggt 240 |||||||| |||||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 1406 ctaaagagagtatctgtcagcaacccagtgatgcttctcgacgaaattgacaagactggt 1465 Query: 241 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaat 300 |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 1466 tctgatgtacgtggggatccagcatcagcactactagaagttcttgatcctgagcagaac 1525 Query: 301 aaaacattcaatgaccactatttgaatgttccgtttgacctgtcaaaggttgtgtttgtt 360 |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1526 aaaacattcaatgatcactatttgaatgttccgtttgacctgtcaaaggtcatatttgtt 1585 Query: 361 gcaactgccaacaggatgcaacctatcccccctgctctgttagataggatggaagtcatc 420 |||||||| ||||||||||| |||||||| ||| ||||||||||||| ||||| ||||| Sbjct: 1586 gcaactgcgaacaggatgcagcctatccctcctcctctgttagatagcatggaggtcatt 1645 Query: 421 gaactaccaggctacacgcctgaagaaaagctgaaaatag 460 || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 1646 gagctaccaggctacacgcctgaagagaagctaaaaatag 1685
>gb|U85494.1|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complete cds Length = 3217 Score = 515 bits (260), Expect = e-143 Identities = 410/460 (89%) Strand = Plus / Plus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || |||||||| ||||||||||||||||| |||||||||||||| | || ||| Sbjct: 1330 ccagtgctgtgttttgttggaccacctggtgttgggaagacatctttggcctcctccata 1389 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||||||||| || || ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1390 gcaaaggccctgaacagaaaattcataagaatctctcttggtggtgtaaaggatgaagct 1449 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 |||||||||||||| ||||||||||||||||||||||||||||| | || || |||||| Sbjct: 1450 gatattaggggccaccgaaggacatacattggaagcatgccagggagacttattgatgga 1509 Query: 181 ctaaagagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggt 240 ||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 1510 ctaaagagggtatctgtgagcaatccagtgatgcttctagatgaaattgacaagactggt 1569 Query: 241 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaat 300 |||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 1570 tctgatgtacgtggtgatcctgcatcagcactactagaagttcttgaccctgagcagaac 1629 Query: 301 aaaacattcaatgaccactatttgaatgttccgtttgacctgtcaaaggttgtgtttgtt 360 ||| ||||||| || |||||||||||||| ||||| ||||||||||| || | |||||| Sbjct: 1630 aaagcattcaacgatcactatttgaatgtgccgttcgacctgtcaaaagtcatatttgtt 1689 Query: 361 gcaactgccaacaggatgcaacctatcccccctgctctgttagataggatggaagtcatc 420 ||||||||||| |||||||||||||| |||||| |||||||||| ||||||||| |||| Sbjct: 1690 gcaactgccaataggatgcaacctataccccctcctctgttagacaggatggaaatcatt 1749 Query: 421 gaactaccaggctacacgcctgaagaaaagctgaaaatag 460 || || ||||||||||| || ||||| ||| | ||||||| Sbjct: 1750 gagctgccaggctacacacccgaagagaagttaaaaatag 1789
>gb|AY109454.1| Zea mays CL1713_1 mRNA sequence Length = 3184 Score = 482 bits (243), Expect = e-133 Identities = 394/446 (88%) Strand = Plus / Plus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || |||||||| ||||||||||||||||| |||||||||||||| | || ||| Sbjct: 1330 ccagtgctgtgttttgttggaccacctggtgttgggaagacatctttggcctcctccata 1389 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||||||||| || || ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1390 gcaaaggccctgaacagaaaattcataagaatctctcttggtggtgtaaaggatgaagct 1449 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 |||||||||||||| ||||||||||||||||||||||||||||| | || || |||||| Sbjct: 1450 gatattaggggccaccgaaggacatacattggaagcatgccagggagacttattgatgga 1509 Query: 181 ctaaagagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggt 240 ||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 1510 ctaaagagggtatctgtgagcaatccagtgatgcttctagatgaaattgacaagactggt 1569 Query: 241 tctgatgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaat 300 |||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 1570 tctgatgtacgtggtgatcctgcatcagcactactagaagttcttgaccctgagcagaac 1629 Query: 301 aaaacattcaatgaccactatttgaatgttccgtttgacctgtcaaaggttgtgtttgtt 360 ||| ||||||| || |||||||||||||| ||||| ||||||||||| || | |||||| Sbjct: 1630 aaagcattcaacgatcactatttgaatgtgccgttcgacctgtcaaaagtcatatttgtt 1689 Query: 361 gcaactgccaacaggatgcaacctatcccccctgctctgttagataggatggaagtcatc 420 ||||||||||| |||||||||||||| | |||||||||| ||||||||| |||| Sbjct: 1690 gcaactgccaataggatgcaacctatannnnntcctctgttagacaggatggaaatcatt 1749 Query: 421 gaactaccaggctacacgcctgaaga 446 || || ||||||||||| || ||||| Sbjct: 1750 gagctgccaggctacacacccgaaga 1775
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 242 bits (122), Expect = 8e-61 Identities = 170/186 (91%) Strand = Plus / Minus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || ||||||||||||||||||||||||||||||||||| || || | || ||| Sbjct: 20647981 ccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgata 20647922 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 20647921 gcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggct 20647862 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 20647861 gatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatgga 20647802 Query: 181 ctaaag 186 |||||| Sbjct: 20647801 ctaaag 20647796 Score = 188 bits (95), Expect = 1e-44 Identities = 119/127 (93%) Strand = Plus / Minus Query: 185 agagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggttctg 244 |||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 20647595 agagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctg 20647536 Query: 245 atgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaataaaa 304 ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 20647535 atgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaa 20647476 Query: 305 cattcaa 311 | ||||| Sbjct: 20647475 cgttcaa 20647469 Score = 172 bits (87), Expect = 6e-40 Identities = 129/143 (90%) Strand = Plus / Minus Query: 318 ctatttgaatgttccgtttgacctgtcaaaggttgtgtttgttgcaactgccaacaggat 377 ||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 20647165 ctatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggat 20647106 Query: 378 gcaacctatcccccctgctctgttagataggatggaagtcatcgaactaccaggctacac 437 |||||| ||||||||| |||||||||||||||||||||| || || |||||||| ||||| Sbjct: 20647105 gcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacac 20647046 Query: 438 gcctgaagaaaagctgaaaatag 460 |||||||| ||||| ||||||| Sbjct: 20647045 acctgaagagaagctaaaaatag 20647023
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 242 bits (122), Expect = 8e-61 Identities = 170/186 (91%) Strand = Plus / Minus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || ||||||||||||||||||||||||||||||||||| || || | || ||| Sbjct: 41592 ccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgata 41533 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 41532 gcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggct 41473 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 41472 gatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatgga 41413 Query: 181 ctaaag 186 |||||| Sbjct: 41412 ctaaag 41407 Score = 188 bits (95), Expect = 1e-44 Identities = 119/127 (93%) Strand = Plus / Minus Query: 185 agagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggttctg 244 |||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 41206 agagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctg 41147 Query: 245 atgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaataaaa 304 ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 41146 atgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaa 41087 Query: 305 cattcaa 311 | ||||| Sbjct: 41086 cgttcaa 41080 Score = 172 bits (87), Expect = 6e-40 Identities = 129/143 (90%) Strand = Plus / Minus Query: 318 ctatttgaatgttccgtttgacctgtcaaaggttgtgtttgttgcaactgccaacaggat 377 ||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 40776 ctatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggat 40717 Query: 378 gcaacctatcccccctgctctgttagataggatggaagtcatcgaactaccaggctacac 437 |||||| ||||||||| |||||||||||||||||||||| || || |||||||| ||||| Sbjct: 40716 gcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacac 40657 Query: 438 gcctgaagaaaagctgaaaatag 460 |||||||| ||||| ||||||| Sbjct: 40656 acctgaagagaagctaaaaatag 40634
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 242 bits (122), Expect = 8e-61 Identities = 170/186 (91%) Strand = Plus / Minus Query: 1 ccagttctatgttttgtgggaccacctggtgttggaaagacatctttggctacatcaata 60 ||||| || ||||||||||||||||||||||||||||||||||| || || | || ||| Sbjct: 113639 ccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgata 113580 Query: 61 gcaaaggccctgaataggaagttcataagaatctctcttggtggcgtaaaggatgaggct 120 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 113579 gcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggct 113520 Query: 121 gatattaggggccatcgaaggacatacattggaagcatgccaggacgcctcatcgatgga 180 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 113519 gatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatgga 113460 Query: 181 ctaaag 186 |||||| Sbjct: 113459 ctaaag 113454 Score = 188 bits (95), Expect = 1e-44 Identities = 119/127 (93%) Strand = Plus / Minus Query: 185 agagggtatctgtcagcaacccagtgatgctccttgatgaaattgacaagactggttctg 244 |||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 113253 agagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctg 113194 Query: 245 atgtacgtggggatccagcatcagcactgctagaagtacttgaccctgagcagaataaaa 304 ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 113193 atgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaa 113134 Query: 305 cattcaa 311 | ||||| Sbjct: 113133 cgttcaa 113127 Score = 172 bits (87), Expect = 6e-40 Identities = 129/143 (90%) Strand = Plus / Minus Query: 318 ctatttgaatgttccgtttgacctgtcaaaggttgtgtttgttgcaactgccaacaggat 377 ||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 112823 ctatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggat 112764 Query: 378 gcaacctatcccccctgctctgttagataggatggaagtcatcgaactaccaggctacac 437 |||||| ||||||||| |||||||||||||||||||||| || || |||||||| ||||| Sbjct: 112763 gcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacac 112704 Query: 438 gcctgaagaaaagctgaaaatag 460 |||||||| ||||| ||||||| Sbjct: 112703 acctgaagagaagctaaaaatag 112681
>dbj|D85610.1| Spinacia oleracea mRNA for ATP-dependent protease Lon, complete cds Length = 3101 Score = 129 bits (65), Expect = 9e-27 Identities = 191/233 (81%) Strand = Plus / Plus Query: 97 cttggtggcgtaaaggatgaggctgatattaggggccatcgaaggacatacattggaagc 156 |||||||| || |||||||| |||||||| | || ||| | |||||||||||||||||| Sbjct: 1416 cttggtggtgtgaaggatgaagctgatatccgagggcataggaggacatacattggaagc 1475 Query: 157 atgccaggacgcctcatcgatggactaaagagggtatctgtcagcaacccagtgatgctc 216 |||||||| || ||||| |||||| ||||||| || ||| ||| || || ||||| Sbjct: 1476 atgccaggtcgtctcattgatggaataaagagagtgggcgtctccaatcctgtaatgctg 1535 Query: 217 cttgatgaaattgacaagactggttctgatgtacgtggggatccagcatcagcactgcta 276 | || || |||||||||||||| |||||||| ||||||||||| || |||||| ||||| Sbjct: 1536 ttagacgagattgacaagactggctctgatgtccgtggggatcctgcttcagcattgcta 1595 Query: 277 gaagtacttgaccctgagcagaataaaacattcaatgaccactatttgaatgt 329 ||||| ||||| || || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 1596 gaagtccttgatcccgaacagaacaaaactttcaacgaccattatttaaatgt 1648
>dbj|AP006700.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H09, TM0550, complete sequence Length = 76403 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 220 gatgaaattgacaagactggttctgatgtacgtggggatccagcatcagcactgctagaa 279 ||||||||||||||||| ||||||||||| || || |||||||| ||||||||||| || Sbjct: 58269 gatgaaattgacaagacgggttctgatgttcgcggagatccagcttcagcactgcttgag 58328 Query: 280 gtacttgaccctgagcagaataaaacattcaa 311 || ||||| ||||| || |||||||||||||| Sbjct: 58329 gttcttgatcctgaacaaaataaaacattcaa 58360 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 97 cttggtggcgtaaaggatgaggctgatattaggggccatcgaaggacatacattggaagc 156 |||||||| || |||||||||||||||||||| || ||| | || ||||||||||||||| Sbjct: 57487 cttggtggagtcaaggatgaggctgatattagaggtcataggagaacatacattggaagc 57546 Query: 157 atgccaggacgcctcatcgatggactaaag 186 ||||| || | ||||| |||||||||||| Sbjct: 57547 atgcctgggaggctcatagatggactaaag 57576 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 13 tttgtgggaccacctggtgttggaaagacatc 44 ||||| |||||||| ||||||||||| ||||| Sbjct: 57403 tttgttggaccaccaggtgttggaaaaacatc 57434
>ref|NM_124075.2| Arabidopsis thaliana ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type p> AT5G47040 mRNA, complete cds Length = 2704 Score = 93.7 bits (47), Expect = 5e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 151 ggaagcatgccaggacgcctcatcgatggactaaagagggtatctgtcagcaacccagtg 210 |||||||||||||| |||||||| ||||| ||||||||||| ||| |||| ||||| Sbjct: 1391 ggaagcatgccagggcgcctcattgatggcctaaagagggttggtgtttgcaatccagtt 1450 Query: 211 atgctccttgatgaaattgacaagactggttctgatgtacgtggggatccagcatcagca 270 ||||| | ||||| |||||||| || || || || || || || |||||||| || ||| Sbjct: 1451 atgctgttggatgagattgacaaaacaggctcagacgttcggggtgatccagcttctgca 1510 Query: 271 ctgctagaagtacttgaccctgagcagaataaaacattcaatgaccactatttgaatgtt 330 ||||| || || | || || |||||||| ||| | || ||||| |||||| |||||||| Sbjct: 1511 ctgctcgaggttttggatccagagcagaacaaatcttttaatgatcactatctgaatgtt 1570 Query: 331 ccgtttgacctgtcaaaggttgtgtttgttgcaactgccaacaggatgcaacctatcccc 390 || | |||| | |||||||| || |||||||| ||||| || ||| | |||||||| || Sbjct: 1571 ccatatgacttatcaaaggtggtttttgttgccactgctaatagggttcaacctattcca 1630 Query: 391 cctgctctgttagataggatgga 413 ||| |||| |||| |||||||| Sbjct: 1631 cctcctcttctagacaggatgga 1653
>gb|BT010392.1| Arabidopsis thaliana At5g47040 mRNA, complete cds Length = 1674 Score = 93.7 bits (47), Expect = 5e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 151 ggaagcatgccaggacgcctcatcgatggactaaagagggtatctgtcagcaacccagtg 210 |||||||||||||| |||||||| ||||| ||||||||||| ||| |||| ||||| Sbjct: 361 ggaagcatgccagggcgcctcattgatggcctaaagagggttggtgtttgcaatccagtt 420 Query: 211 atgctccttgatgaaattgacaagactggttctgatgtacgtggggatccagcatcagca 270 ||||| | ||||| |||||||| || || || || || || || |||||||| || ||| Sbjct: 421 atgctgttggatgagattgacaaaacaggctcagacgttcggggtgatccagcttctgca 480 Query: 271 ctgctagaagtacttgaccctgagcagaataaaacattcaatgaccactatttgaatgtt 330 ||||| || || | || || |||||||| ||| | || ||||| |||||| |||||||| Sbjct: 481 ctgctcgaggttttggatccagagcagaacaaatcttttaatgatcactatctgaatgtt 540 Query: 331 ccgtttgacctgtcaaaggttgtgtttgttgcaactgccaacaggatgcaacctatcccc 390 || | |||| | |||||||| || |||||||| ||||| || ||| | |||||||| || Sbjct: 541 ccatatgacttatcaaaggtggtttttgttgccactgctaatagggttcaacctattcca 600 Query: 391 cctgctctgttagataggatgga 413 ||| |||| |||| |||||||| Sbjct: 601 cctcctcttctagacaggatgga 623
>gb|BT002374.1| Arabidopsis thaliana Lon protease homolog 1 precursor (At5g47040) mRNA, complete cds Length = 1917 Score = 93.7 bits (47), Expect = 5e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 151 ggaagcatgccaggacgcctcatcgatggactaaagagggtatctgtcagcaacccagtg 210 |||||||||||||| |||||||| ||||| ||||||||||| ||| |||| ||||| Sbjct: 408 ggaagcatgccagggcgcctcattgatggcctaaagagggttggtgtttgcaatccagtt 467 Query: 211 atgctccttgatgaaattgacaagactggttctgatgtacgtggggatccagcatcagca 270 ||||| | ||||| |||||||| || || || || || || || |||||||| || ||| Sbjct: 468 atgctgttggatgagattgacaaaacaggctcagacgttcggggtgatccagcttctgca 527 Query: 271 ctgctagaagtacttgaccctgagcagaataaaacattcaatgaccactatttgaatgtt 330 ||||| || || | || || |||||||| ||| | || ||||| |||||| |||||||| Sbjct: 528 ctgctcgaggttttggatccagagcagaacaaatcttttaatgatcactatctgaatgtt 587 Query: 331 ccgtttgacctgtcaaaggttgtgtttgttgcaactgccaacaggatgcaacctatcccc 390 || | |||| | |||||||| || |||||||| ||||| || ||| | |||||||| || Sbjct: 588 ccatatgacttatcaaaggtggtttttgttgccactgctaatagggttcaacctattcca 647 Query: 391 cctgctctgttagataggatgga 413 ||| |||| |||| |||||||| Sbjct: 648 cctcctcttctagacaggatgga 670
>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE Length = 126498 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 97 cttggtggcgtaaaggatgaggctgatattaggggccatcgaaggacatacattggaagc 156 |||||||| || |||||||||||||||||||| || ||| | || ||||||||||||||| Sbjct: 23493 cttggtggagtcaaggatgaggctgatattagaggacataggagaacatacattggaagc 23552 Query: 157 atgccagg 164 |||||||| Sbjct: 23553 atgccagg 23560 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 220 gatgaaattgacaagactggttctgatgtacgtggggatccagcatcagcactgctagaa 279 |||||||| |||||||| ||||||||||| || || |||||||| ||||| |||| || Sbjct: 24293 gatgaaatcgacaagacaggttctgatgttcgcggcgatccagcttcagcgttgcttgag 24352 Query: 280 gtacttgaccctgagcagaataaaacattcaatga 314 || ||||| ||||| || ||||||||||||||||| Sbjct: 24353 gttcttgatcctgaacaaaataaaacattcaatga 24387
>emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f20, COMPLETE SEQUENCE Length = 149149 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 97 cttggtggcgtaaaggatgaggctgatattaggggccatcgaaggacatacattggaagc 156 |||||||| || |||||||||||||||||||| || ||| | || ||||||||||||||| Sbjct: 143782 cttggtggagtcaaggatgaggctgatattagaggacataggagaacatacattggaagc 143841 Query: 157 atgccagg 164 |||||||| Sbjct: 143842 atgccagg 143849 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 220 gatgaaattgacaagactggttctgatgtacgtggggatccagcatcagcactgctagaa 279 |||||||| |||||||| ||||||||||| || || |||||||| ||||| |||| || Sbjct: 144582 gatgaaatcgacaagacaggttctgatgttcgcggcgatccagcttcagcgttgcttgag 144641 Query: 280 gtacttgaccctgagcagaataaaacattcaatga 314 || ||||| ||||| || ||||||||||||||||| Sbjct: 144642 gttcttgatcctgaacaaaataaaacattcaatga 144676
>ref|XM_389901.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09725.1) partial mRNA Length = 2817 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 112 gatgaggctgatattaggggccatcgaag 140 ||||||||||| ||||||||||||||||| Sbjct: 1567 gatgaggctgagattaggggccatcgaag 1595
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 14 ttgtgggaccacctggtgttggaaagac 41 |||||||||| ||||||||||||||||| Sbjct: 1337205 ttgtgggaccgcctggtgttggaaagac 1337232
>dbj|AB013394.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD22 Length = 85661 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 151 ggaagcatgccaggacgcctcatcgatggactaaag 186 |||||||||||||| |||||||| ||||| |||||| Sbjct: 64349 ggaagcatgccagggcgcctcattgatggcctaaag 64314
>gb|AF033862.1|AF033862 Arabidopsis thaliana Lon protease (LON) gene, complete cds Length = 6848 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 151 ggaagcatgccaggacgcctcatcgatggactaaag 186 |||||||||||||| |||||||| ||||| |||||| Sbjct: 4063 ggaagcatgccagggcgcctcattgatggcctaaag 4098
>ref|XM_454420.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10395g predicted mRNA Length = 3336 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 10 tgttttgtgggaccacctggtgttggaaagacatc 44 |||||||| |||||||||||||| || |||||||| Sbjct: 1795 tgttttgttggaccacctggtgtgggtaagacatc 1829
>gb|AE004267.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 175 of 251 of the complete chromosome Length = 10238 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 250 cgtggggatccagcatcagcactgctagaagtacttgaccctgagca 296 ||||| ||||| || || ||||||||||| || |||||||||||||| Sbjct: 8854 cgtggtgatccggcttctgcactgctagaggtgcttgaccctgagca 8808
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 10 tgttttgtgggaccacctggtgttggaaagacatc 44 |||||||| |||||||||||||| || |||||||| Sbjct: 917092 tgttttgttggaccacctggtgtgggtaagacatc 917058
>emb|BX470078.6| Zebrafish DNA sequence from clone DKEYP-8C4 in linkage group 5, complete sequence Length = 184333 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 289 cctgagcagaataaaacattcaa 311 ||||||||||||||||||||||| Sbjct: 93774 cctgagcagaataaaacattcaa 93796
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 5 ttctatgttttgtgggaccacctggtgttggaaagacatcttt 47 |||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 2104426 ttctgtgtttagttggaccacctggtgttggaaaaacttcttt 2104384
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 44.1 bits (22), Expect = 0.40 Identities = 40/46 (86%) Strand = Plus / Plus Query: 5 ttctatgttttgtgggaccacctggtgttggaaagacatctttggc 50 |||||||||| || ||||||||||| ||||| || || |||||||| Sbjct: 1286657 ttctatgtttggttggaccacctggggttgggaaaacctctttggc 1286702
>emb|BX294389.5| Zebrafish DNA sequence from clone DKEY-180I4 in linkage group 5, complete sequence Length = 144422 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 cctgagcagaataaaacattca 310 |||||||||||||||||||||| Sbjct: 113896 cctgagcagaataaaacattca 113875
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 89 gaatctctcttggtggcgtaaaggatgaggctga 122 |||| ||||||||||| ||||| ||||||||||| Sbjct: 2746458 gaatatctcttggtggagtaaatgatgaggctga 2746425
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 tgctagaagtacttgaccctgagcagaat 300 |||| |||||||| ||||||||||||||| Sbjct: 1304938 tgctggaagtactcgaccctgagcagaat 1304966
>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 2/4 Length = 346939 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 256 gatccagcatcagcactgctagaagtact 284 |||||||| |||||| ||||||||||||| Sbjct: 162659 gatccagcttcagcaatgctagaagtact 162687
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 tgctagaagtacttgaccctgagca 296 |||||||||| |||||||||||||| Sbjct: 683818 tgctagaagtgcttgaccctgagca 683842
>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence Length = 247161 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 catctttggctacatcaatag 61 ||||||||||||||||||||| Sbjct: 54693 catctttggctacatcaatag 54713
>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence Length = 214196 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 catctttggctacatcaatag 61 ||||||||||||||||||||| Sbjct: 113177 catctttggctacatcaatag 113197
>gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178563 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gcctgaagaaaagctgaaaat 458 ||||||||||||||||||||| Sbjct: 102544 gcctgaagaaaagctgaaaat 102524
>gb|AC091207.3| Drosophila melanogaster 3L BAC RP98-12P14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160504 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gcctgaagaaaagctgaaaat 458 ||||||||||||||||||||| Sbjct: 8646 gcctgaagaaaagctgaaaat 8626
>gb|AC008683.7| Homo sapiens chromosome 5 clone CTB-58D19, complete sequence Length = 114127 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 gaaggacatacattggaagcatgcc 161 |||||||||||| |||||||||||| Sbjct: 83918 gaaggacatacactggaagcatgcc 83942
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 256 gatccagcatcagcactgctagaagtact 284 ||||||||||||||| || |||||||||| Sbjct: 624490 gatccagcatcagcaatgttagaagtact 624462
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 256 gatccagcatcagcactgctagaagtact 284 ||||||||||||||||| |||||||||| Sbjct: 492748 gatccagcatcagcactattagaagtact 492776
>emb|Z33357.1|MCAAU M.capricolum DNA for CONTIG MCAAU Length = 922 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 256 gatccagcatcagcactgctagaagtact 284 ||||||||||||||| || |||||||||| Sbjct: 666 gatccagcatcagcaatgttagaagtact 694
>gb|AE003567.4| Drosophila melanogaster chromosome 3L, section 18 of 83 of the complete sequence Length = 166593 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gcctgaagaaaagctgaaaat 458 ||||||||||||||||||||| Sbjct: 115874 gcctgaagaaaagctgaaaat 115854
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 259 ccagcatcagcactgctagaagtacttgaccctgagcagaa 299 ||||| || |||||||| ||||| || |||||||||||||| Sbjct: 2631826 ccagcctcggcactgctggaagtgctcgaccctgagcagaa 2631866
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 277 gaagtacttgaccctgagcagaataaaacattcaatgaccactatttgaatgttccgttt 336 ||||| ||||||||||||||||| | |||||| |||||| ||| || | || |||| | Sbjct: 3791459 gaagtccttgaccctgagcagaacagcacattctctgaccattatctggaagtcccgtat 3791518 Query: 337 gacctgtca 345 ||||||||| Sbjct: 3791519 gacctgtca 3791527
>gb|AC138289.8| Mus musculus chromosome 1, clone RP24-329K3, complete sequence Length = 168668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 acaagactggttctgatgta 249 |||||||||||||||||||| Sbjct: 160244 acaagactggttctgatgta 160263
>gb|AE006186.1| Pasteurella multocida subsp. multocida str. Pm70 section 153 of 204 of the complete genome Length = 10699 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ctgtcaaaggttgtgtttgt 359 |||||||||||||||||||| Sbjct: 2250 ctgtcaaaggttgtgtttgt 2231
>gb|U88309.2| Caenorhabditis elegans cosmid T23B3, complete sequence Length = 32428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ttgatgaaattgacaagact 237 |||||||||||||||||||| Sbjct: 24237 ttgatgaaattgacaagact 24256
>ref|XM_823547.1| Trypanosoma brucei TREU927 replication factor C subunit 1 (Tb11.02.3360) partial mRNA Length = 1764 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 gggaccacctggtgttggaaagac 41 |||||||||||||||||| ||||| Sbjct: 168 gggaccacctggtgttggtaagac 191
>gb|AC134511.2| Homo sapiens 12 BAC RP11-528M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125643 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 cttgaccctgagcagaataaaaca 306 |||||| ||||||||||||||||| Sbjct: 125159 cttgactctgagcagaataaaaca 125182
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 cgtggggatccagcatcagcactgctagaagt 281 ||||| ||||||||||||||| |||| ||||| Sbjct: 2345801 cgtggtgatccagcatcagcattgcttgaagt 2345832
>ref|XM_786031.1| PREDICTED: Strongylocentrotus purpuratus similar to ras homolog gene family, member T1 (LOC586242), mRNA Length = 1752 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctggtgttggaaagacatct 45 |||||||||||||||||||| Sbjct: 44 ctggtgttggaaagacatct 63
>emb|AL354976.11| Human DNA sequence from clone RP11-20I6 on chromosome 10 Contains a CpG island, complete sequence Length = 127766 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 tctgttagataggatggaag 415 |||||||||||||||||||| Sbjct: 111293 tctgttagataggatggaag 111312
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 115 gaggctgatattaggggccatcgaaggacata 146 ||||| || ||||||||||| ||||||||||| Sbjct: 742701 gaggcagagattaggggccaccgaaggacata 742670
>dbj|AK151078.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022K13 product:RAB7, member RAS oncogene family, full insert sequence Length = 1434 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctggtgttggaaagacatct 45 |||||||||||||||||||| Sbjct: 230 ctggtgttggaaagacatct 249
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 265 tcagcactgctagaagtacttgaccctgagca 296 |||||| ||||||||||||| || |||||||| Sbjct: 1069699 tcagcattgctagaagtactggatcctgagca 1069668
>ref|NM_059520.1| Caenorhabditis elegans T23B3.3 (T23B3.3) mRNA, complete cds Length = 771 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ttgatgaaattgacaagact 237 |||||||||||||||||||| Sbjct: 235 ttgatgaaattgacaagact 254
>gb|AC093170.3| Homo sapiens BAC clone RP11-334M18 from 2, complete sequence Length = 15125 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 ttgttgcaactgccaacaggatgc 379 ||||||||||||||| |||||||| Sbjct: 1695 ttgttgcaactgccagcaggatgc 1672
>gb|AC110782.2| Homo sapiens BAC clone RP11-389H18 from 2, complete sequence Length = 73796 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 ttgttgcaactgccaacaggatgc 379 ||||||||||||||| |||||||| Sbjct: 73491 ttgttgcaactgccagcaggatgc 73468
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 8 tatgttttgtgggaccacctggtgttggaaagacatcttt 47 ||||||| |||||||||||||||| ||||| || ||||| Sbjct: 181658 tatgtttaatgggaccacctggtgtaggaaaaacttcttt 181619 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,870,404 Number of Sequences: 3902068 Number of extensions: 3870404 Number of successful extensions: 76500 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76204 Number of HSP's gapped (non-prelim): 295 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
