>YG4B_YEAST (P46951) Hypothetical 95.4 kDa protein in SNG1-PMT6 intergenic|
           region
          Length = 817

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/44 (29%), Positives = 29/44 (65%)
 Frame = -3

Query: 267 NWIQN*FFVECLLEMNSPASYMSKVIMEYVFLILSKIYFNKLEN 136
           N +QN F+ E L  +++     + ++ EY+ LI++K+ FN++++
Sbjct: 162 NIMQNVFYKELLAHVDTIPPESNGLLFEYISLIVAKLRFNQIQD 205

>MATK_VACVI (Q8WIJ9) Maturase K (Intron maturase)|
          Length = 502

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = -2

Query: 364 DPK*IHLGFFFQHIH*QLRLQVKMNELPNKNSELDPKLIFCGVPTRNE-FSSILYVQGHY 188
           DP  +HL  FF H            E PN+NS + PK        RN+ F   LY   ++
Sbjct: 169 DPSSLHLLRFFLH------------EYPNRNSLITPKKYSFSFSKRNQKFFLFLY---NF 213

Query: 187 GVCLFDSVENLFQ*AGKFLCN 125
            VC ++S+    +     LC+
Sbjct: 214 HVCEYESIFVFLRNQSSHLCS 234

>RAD17_YEAST (P48581) DNA damage checkpoint control protein RAD17 (EC 3.1.11.2)|
           (DNA repair exonuclease RAD17)
          Length = 401

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -2

Query: 415 YGAGNGNQTRNPNIMSLDPK*IHLGFFFQHIH*QLRLQVKMNELPNKNSELDPKLIFCGV 236
           YG   GN+T N N++ L+ K               ++++   E  NKN E + +   C  
Sbjct: 348 YGTDKGNETSNDNLLQLNGK---------------KIKLPSEEENNKNRESEDEENHCKY 392

Query: 235 PTRN 224
           PT++
Sbjct: 393 PTKD 396

>ERD1_YEAST (P16151) Protein ERD1|
          Length = 362

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 13  RLFFPRHFPGIIFLSILFLIAVPSKLSLCIAYLILIVHCKEIF 141
           R+  P HF  +     + +I  P K  + I Y + ++ C  IF
Sbjct: 84  RIIIPFHFATVFLFEFMNIIEGPLKNIILIVYFLPLIQCVTIF 126

>6PGL_BUCAP (Q8K9N9) 6-phosphogluconolactonase (EC 3.1.1.31)|
           (6-P-gluconolactonase)
          Length = 333

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 207 KMLENSFLVGTPQKISFGSNSEFLLGSSFILTC 305
           K  + S + GTP  ISF S+ +FL  SS+   C
Sbjct: 72  KKKKESIVPGTPNYISFDSSEKFLFCSSYHADC 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,224,411
Number of Sequences: 219361
Number of extensions: 1589908
Number of successful extensions: 3083
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3083
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)