>ZN580_MOUSE (Q9DB38) Zinc finger protein 580|
          Length = 172

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 211 IQCPENPRFPPQGSSTEGESGPK 279
           +Q  E PR PPQ  +T GE GP+
Sbjct: 67  VQLEEEPRGPPQREATPGEPGPR 89

>NHR71_CAEEL (Q9GTD4) Nuclear hormone receptor family member nhr-71|
          Length = 579

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 50  CAEDERG*AICRSCGMSKCIGRGAFRLRGKQPRK 151
           C  D  G   CRSC  +KCI  G  ++   QPR+
Sbjct: 53  CLIDPDGRCACRSCRFTKCIEAG-MKIGAVQPRR 85

>MDLB_PSEPU (P20932) L(+)-mandelate dehydrogenase (EC 1.-.-.-) (S-mandelate|
           dehydrogenase) (MDH)
          Length = 393

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 139 ATAKAGVDEAEARMSA*VTKTLVRIQCPENPRFPPQGSSTEG 264
           A  + GVDE    + A + +TL +I CP+     P     EG
Sbjct: 335 ARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEG 376

>GP176_MOUSE (Q80WT4) Probable G-protein coupled receptor 176 (G-protein coupled|
           receptor AGR9)
          Length = 515

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +1

Query: 160 DEAEARM--SA*VTKTLVRIQCPENPRFPPQGSSTEGESGPKIRPKGVVDGQQVNIPVLP 333
           +E+EA+   SA      V   CPE  + PPQ         P + P G VD +    PV P
Sbjct: 387 EESEAKYLGSADFQAKEVLTSCPEGEQEPPQ-------LAPSVPPPGTVDSEPRVSPVAP 439

Query: 334 L 336
           +
Sbjct: 440 M 440

>SPRT_VIBVY (Q7MHK4) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 194 VTQADILASASSTPAFAVASL*GGTLPYRC 105
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>SPRT_VIBVU (Q8DCA5) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 194 VTQADILASASSTPAFAVASL*GGTLPYRC 105
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>PCDG7_PANTR (Q5DRB3) Protocadherin gamma A7 precursor (PCDH-gamma-A7)|
          Length = 932

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 28/98 (28%), Positives = 41/98 (41%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQ 186
           P +L P++PT GSTG+     S  P  L+      +VD+  G N      W+        
Sbjct: 560 PEILYPALPTDGSTGMELAPRSAEPGYLV--TKVVAVDKDSGQNA-----WL-------- 604

Query: 185 ADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
           + +L  AS    FAV    G     R +L   +  +SL
Sbjct: 605 SYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSL 642

>PCDG7_HUMAN (Q9Y5G6) Protocadherin gamma A7 precursor (PCDH-gamma-A7)|
          Length = 932

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 28/98 (28%), Positives = 41/98 (41%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQ 186
           P +L P++PT GSTG+     S  P  L+      +VD+  G N      W+        
Sbjct: 560 PEILYPALPTDGSTGMELAPRSAEPGYLV--TKVVAVDKDSGQNA-----WL-------- 604

Query: 185 ADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
           + +L  AS    FAV    G     R +L   +  +SL
Sbjct: 605 SYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSL 642

>ZN580_HUMAN (Q9UK33) Zinc finger protein 580 (LDL-induced EC protein)|
          Length = 172

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 211 IQCPENPRFPPQGSSTEGESGPK 279
           +Q  E PR PPQ  +  GE GP+
Sbjct: 67  VQLEEEPRGPPQREAPPGEPGPR 89

>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC|
           3.2.1.4)
          Length = 484

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPC 243
           P L    V  R +T  L  C   TP  L +G   P+VD  C
Sbjct: 105 PELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKC 145

>VL2_HPV32 (P36757) Minor capsid protein L2|
          Length = 476

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 380 PSFG*PSLLRPSVPTRGSTGILTCCPSTTP 291
           P +  P  LRPS+P  G+  +LT  P+  P
Sbjct: 164 PVYSDPFTLRPSLPVEGNGRLLTSHPTIAP 193

>URIC_DROSU (O44111) Uricase (EC 1.7.3.3) (Urate oxidase) (Fragment)|
          Length = 339

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 176 LASASSTPAFAVASL*GGTLPYRCILTSHSFGR-SLSPVHLQRKG 45
           L   SS      ASL G   P++  +T H +G+ ++  +H+ RKG
Sbjct: 1   LRQPSSASNRTAASLDGQETPFQYEITDHGYGKDAVKVLHVSRKG 45

>PYRD_FUSNN (Q8RG85) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 304

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 199 TLVRIQCPENPRFPPQGSSTEGESGPKIRPKGV----VDGQQVNIPVLPLVG 342
           TLV I        P   ++T G SGP IRP  +       Q VNIP++ + G
Sbjct: 194 TLVGIVLDRKTGKPIIANTTGGLSGPAIRPVAIRMVYQVAQAVNIPIIGMGG 245

>PCDGB_PANTR (Q5DRC0) Protocadherin gamma A11 precursor (PCDH-gamma-A11)|
          Length = 935

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 28/98 (28%), Positives = 38/98 (38%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQ 186
           P +L P++PT GSTG+     S  P  L+      +VD+  G N   S            
Sbjct: 561 PEILYPALPTDGSTGVELAPRSAEPGYLV--TKVVAVDKDSGQNAWLSYR---------- 608

Query: 185 ADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
              L  AS    FAV    G     R +L   +  +SL
Sbjct: 609 ---LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSL 643

>PCDGB_HUMAN (Q9Y5H2) Protocadherin gamma A11 precursor (PCDH-gamma-A11)|
          Length = 935

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 28/98 (28%), Positives = 38/98 (38%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQ 186
           P +L P++PT GSTG+     S  P  L+      +VD+  G N   S            
Sbjct: 561 PEILYPALPTDGSTGVELAPRSAEPGYLV--TKVVAVDKDSGQNAWLSYR---------- 608

Query: 185 ADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
              L  AS    FAV    G     R +L   +  +SL
Sbjct: 609 ---LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSL 643

>PIGU_SCHPO (O13883) GPI transamidase component GAB1 homolog|
          Length = 408

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
 Frame = -2

Query: 332 GSTGILTCCPSTTPF----GLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQADILASA 165
           GS  I  CC + T F     L+L   S  +   C  ++ F        +FV     LA  
Sbjct: 165 GSYAIYACCMALTVFINPNALLLFFPSYLILRKCNSSIKFR------QIFVVFLFYLAGL 218

Query: 164 SSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
             T  F + SL    +P+R  L SH    +L
Sbjct: 219 IITSGFFLNSLSFLKIPFRVYLDSHDLTPNL 249

>THIE_STRAW (Q82AF9) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 215

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 204 GENPMPRKPKVSSARFVHGG*VRA*DQAERRSRWTTGQYSCTTPCWYGGTEEARLA 371
           G+ P+P    +  A  + G    A  +AE  +      Y CT PCW   T+  R A
Sbjct: 94  GDLPVPAARAILGADVLIGRSTHAEAEAEAAAVQEGVDYFCTGPCWPTPTKPGRHA 149

>PCDGA_PANTR (Q5DRC1) Protocadherin gamma A10 precursor (PCDH-gamma-A10)|
          Length = 936

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 28/98 (28%), Positives = 37/98 (37%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQ 186
           P +L P++PT GSTG+     S  P  L+      +VD   G N   S            
Sbjct: 564 PEILYPALPTDGSTGVELAPRSAEPGYLV--TKVVAVDRDSGQNAWLSYR---------- 611

Query: 185 ADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
              L  AS    FAV    G     R +L   +  +SL
Sbjct: 612 ---LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSL 646

>PCDGA_HUMAN (Q9Y5H3) Protocadherin gamma A10 precursor (PCDH-gamma-A10)|
          Length = 936

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 28/98 (28%), Positives = 37/98 (37%)
 Frame = -2

Query: 365 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQ 186
           P +L P++PT GSTG+     S  P  L+      +VD   G N   S            
Sbjct: 564 PEILYPALPTDGSTGVELAPRSAEPGYLV--TKVVAVDRDSGQNAWLSYR---------- 611

Query: 185 ADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSL 72
              L  AS    FAV    G     R +L   +  +SL
Sbjct: 612 ---LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSL 646

>NHR35_CAEEL (Q17771) Nuclear hormone receptor family member nhr-35|
          Length = 542

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 41  ERPCAEDERG*AICRSCGMSKCIGRG 118
           E  C  D+   A+CR C   KCI  G
Sbjct: 116 ESKCEIDKHNRAVCRYCRFMKCISSG 141

>LUXC_PHOLL (Q7N577) Acyl-CoA reductase (EC 1.2.1.50)|
          Length = 480

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = -2

Query: 239 GNLGFSGHWILTNVFVTQADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSLSPVH 60
           GN+  SG   +    +T+   +   SST  F   +L    L +  +  +H   RSLS V+
Sbjct: 153 GNVPLSGIMSILRAILTKNQCIIKTSSTDPFTANAL---ALSFIDVDPNHPITRSLSVVY 209

Query: 59  LQRKGARSVS 30
              +G  S++
Sbjct: 210 WPHQGDTSLA 219

>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)|
            (Proliferation-related protein p80) [Contains: MAP1 light
            chain LC2]
          Length = 2805

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +1

Query: 217  CPENPRFPPQGSSTEGESGPKIRPKGVVDGQQVNIPVLPLVGTEGRRRLG*P 372
            C   PR P +G  +     P + P   +D + ++   + LVG  GRRR+G P
Sbjct: 2437 CXTEPR-PHRGELSPSFLNPPLPPS--IDDRDLSTEEVRLVGRGGRRRVGGP 2485

>NHR91_CAEEL (Q9U2R6) Nuclear hormone receptor family member nhr-91|
          Length = 474

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
 Frame = +2

Query: 50  CAEDERG*AICRSCGMSKCIGRGAFRLRGKQPRKRGSTXXXXXXXXXXXXHW*ESNAPKT 229
           C  D++    C+SC   KCI +G      ++ R  G                  SN  + 
Sbjct: 142 CEIDKQNRNRCQSCRFRKCISKGMLTEAVREDRMPGGRNGNSIY----------SNYKQR 191

Query: 230 QGFLRKVR------PRRVSQGLRSGRK 292
           +  +RK +       RR  Q L SG+K
Sbjct: 192 RSIIRKTKDYVEEQERRPFQSLPSGKK 218

>CO9_BOVIN (Q3MHN2) Complement component C9 precursor|
          Length = 548

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -2

Query: 176 LASASSTPAFAVASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKG 9
           L  A  TP++  A   G  LP  C ++S S      P   Q   +RS+  +  F G
Sbjct: 18  LLRAGPTPSYDPAERQGTPLPIDCRMSSWSEWSKCDPCLKQMFRSRSIEIFGQFNG 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,375,415
Number of Sequences: 219361
Number of extensions: 1037904
Number of successful extensions: 2940
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)