ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdf22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT016384.1| Zea mays clone Contig217 mRNA sequence 226 4e-56
2gb|BT017787.1| Zea mays clone EL01N0504C04.c mRNA sequence 226 4e-56
3ref|XM_468609.1| Oryza sativa (japonica cultivar-group), mRNA 224 1e-55
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 224 1e-55
5gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genom... 224 1e-55
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 224 1e-55
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 224 1e-55
8dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 224 1e-55
9dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic D... 224 1e-55
10ref|XM_479144.1| Oryza sativa (japonica cultivar-group), mRNA 216 4e-53
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 200 2e-48
12dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 200 2e-48
13dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 2e-48
14gb|AY103771.1| Zea mays PCO152633 mRNA sequence 198 8e-48
15gb|BT016406.1| Zea mays clone Contig239 mRNA sequence 194 1e-46
16gb|AY103571.1| Zea mays PCO153825 mRNA sequence 194 1e-46
17dbj|AB077113.1| Prunus persica mRNA, microsatellite marker M9a 68 2e-08
18gb|BC064441.1| Danio rerio zgc:77235, mRNA (cDNA clone MGC:77235... 54 3e-04
19ref|NM_200030.1| Danio rerio zgc:77235 (zgc:77235), mRNA 54 3e-04
20gb|AY961477.1| Phytophthora infestans clone MY-19-H-09 ribosomal... 54 3e-04
21ref|NM_191158.1| Oryza sativa (japonica cultivar-group), predic... 52 0.001
22ref|XM_501165.1| Yarrowia lipolytica CLIB122, YALI0B21076g predi... 52 0.001
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
24dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
25emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 52 0.001
26gb|AF051765.1|AF051765 Picea mariana putative 60S ribosomal prot... 50 0.005
27gb|AF051764.1|AF051764 Picea mariana putative 60S ribosomal prot... 50 0.005
28gb|AF051252.1|AF051252 Picea mariana probable 60S ribosomal prot... 50 0.005
29dbj|AB042856.1| Panax ginseng mRNA for 60S ribosomal protein L27... 48 0.019
30gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 46 0.075
31gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.075
32gb|AY116644.1| Streptomyces viridifaciens amino acid aminotransf... 46 0.075
33ref|NM_210867.1| Eremothecium gossypii AFL035Cp (AFL035C), mRNA 46 0.075
34dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.075
35ref|XM_475150.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
36gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
37ref|XM_883456.1| Leishmania major strain Friedlin hypothetical p... 42 1.2
38ref|XM_754375.1| Ustilago maydis 521 hypothetical protein (UM033... 42 1.2
39emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 42 1.2
40ref|XM_539020.2| PREDICTED: Canis familiaris similar to 5T4 onco... 42 1.2
41gb|AC092148.6| Homo sapiens BAC clone RP11-95L23 from 7, complet... 42 1.2
42emb|X86552.1|BJDNASHC B.japonicum shc gene 42 1.2
43emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.2
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
45dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.2
46gb|AY293853.1| Holosticha sp. WJC-2003 micronucleus, complete ge... 40 4.6
47ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
48gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 4.6
49ref|NM_192983.1| Oryza sativa (japonica cultivar-group), predic... 40 4.6
50ref|XM_470196.1| Oryza sativa (japonica cultivar-group), predic... 40 4.6
51gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
52gb|DQ356948.1| Crocodilepox virus, complete genome 40 4.6
53gb|AY423269.1| Streptomyces diastaticus 108 cytochrome P450 mono... 40 4.6
54gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 4.6
55gb|AC004112.2| Homo sapiens BAC clone CTA-313E3 from 7, complete... 40 4.6
56emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 4.6
57emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 4.6
58gb|AC146143.2| Pan troglodytes BAC clone RP43-37I19 from 7, comp... 40 4.6
59ref|XM_762522.1| Giardia lamblia ATCC 50803 60S ribosomal protei... 40 4.6
60gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 4.6
61gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.6
62emb|AL357623.14| Human DNA sequence from clone RP11-342E24 on ch... 40 4.6
63emb|AL157883.15| Human DNA sequence from clone RP11-360J12 on ch... 40 4.6
64gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
65emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.6
66gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.6
67gb|DQ397841.1| Cenarchaeum symbiosum clone C06A09, complete sequ... 40 4.6
68gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.6
69gb|AE011921.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.6
70gb|AE011811.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.6
71gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 4.6
72gb|AF385625.1|AF385625 Sus scrofa interleukin-13 gene, complete cds 40 4.6
73dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
74dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.6
75gb|AE004714.1| Pseudomonas aeruginosa PAO1, section 275 of 529 o... 40 4.6
76gb|AE004607.1| Pseudomonas aeruginosa PAO1, section 168 of 529 o... 40 4.6
77ref|XM_215469.3| PREDICTED: Rattus norvegicus microtubule-associ... 40 4.6
78dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 4.6
79dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
80dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
81dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
82dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
83dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
84dbj|AK109328.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
85dbj|AK106657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
86dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
87gb|AC147652.4| Pan troglodytes BAC clone RP43-136A3 from chromos... 40 4.6
88emb|X60370.1|RRMAP1B5 R.norvegicus mRNA for microtubule associat... 40 4.6
89emb|AJ628018.2| Streptomyces sp. SCC 2136 deoxysugar biosyntheti... 40 4.6
90gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 4.6
91gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 4.6
92emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chro... 40 4.6

>gb|BT016384.1| Zea mays clone Contig217 mRNA sequence
          Length = 696

 Score =  226 bits (114), Expect = 4e-56
 Identities = 177/198 (89%)
 Strand = Plus / Plus

                                                                       
Query: 12  tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtcgtcgacgtct 71
           |||||||  |||||||||| ||||||||||||||||||||||||||     |||||||| 
Sbjct: 286 tggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtca 345

                                                                       
Query: 72  cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
           |||||||||||||||||||||||||||| |||||| ||||||||   |||||||| ||||
Sbjct: 346 cgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaagcccattgtcg 405

                                                                       
Query: 132 tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
           ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |
Sbjct: 406 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccg 465

                             
Query: 192 tcgtgctcgtcgcctagg 209
           ||||||||  ||||||||
Sbjct: 466 tcgtgctcaccgcctagg 483



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>gb|BT017787.1| Zea mays clone EL01N0504C04.c mRNA sequence
          Length = 711

 Score =  226 bits (114), Expect = 4e-56
 Identities = 177/198 (89%)
 Strand = Plus / Plus

                                                                       
Query: 12  tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtcgtcgacgtct 71
           |||||||  |||||||||| ||||||||||||||||||||||||||     |||||||| 
Sbjct: 300 tggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtca 359

                                                                       
Query: 72  cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
           |||||||||||||||||||||||||||| |||||| ||||||||   |||||||| ||||
Sbjct: 360 cgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaagcccattgtcg 419

                                                                       
Query: 132 tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
           ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |
Sbjct: 420 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccg 479

                             
Query: 192 tcgtgctcgtcgcctagg 209
           ||||||||  ||||||||
Sbjct: 480 tcgtgctcaccgcctagg 497



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>ref|XM_468609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 694

 Score =  224 bits (113), Expect = 1e-55
 Identities = 173/191 (90%), Gaps = 4/191 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctctggtcc-tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtc 61
           ||||||||| |||||||  ||||||||||||| |||||||||| || |||||||||||||
Sbjct: 262 ctctggtccatggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtc 321

                                                                       
Query: 62  gtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgcc---ggag 118
            |||||||| | ||||||||||||  |||||||||||||||||||||||| ||   | ||
Sbjct: 322 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 381

                                                                       
Query: 119 aagcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggcc 178
           | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 382 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 441

                      
Query: 179 gccggcggcgc 189
           |||||||||||
Sbjct: 442 gccggcggcgc 452



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  224 bits (113), Expect = 1e-55
 Identities = 173/191 (90%), Gaps = 4/191 (2%)
 Strand = Plus / Plus

                                                                            
Query: 3        ctctggtcc-tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtc 61
                ||||||||| |||||||  ||||||||||||| |||||||||| || |||||||||||||
Sbjct: 16599731 ctctggtccatggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtc 16599790

                                                                            
Query: 62       gtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgcc---ggag 118
                 |||||||| | ||||||||||||  |||||||||||||||||||||||| ||   | ||
Sbjct: 16599791 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 16599850

                                                                            
Query: 119      aagcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggcc 178
                | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16599851 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 16599910

                           
Query: 179      gccggcggcgc 189
                |||||||||||
Sbjct: 16599911 gccggcggcgc 16599921



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 31       cgcggaggccggcggcgaca 50
                ||||||||||||||||||||
Sbjct: 11143430 cgcggaggccggcggcgaca 11143411



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 28      ggccgcggaggccggcggcg 47
               ||||||||||||||||||||
Sbjct: 1959655 ggccgcggaggccggcggcg 1959636



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>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete
             sequence
          Length = 133843

 Score =  224 bits (113), Expect = 1e-55
 Identities = 173/191 (90%), Gaps = 4/191 (2%)
 Strand = Plus / Minus

                                                                         
Query: 3     ctctggtcc-tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtc 61
             ||||||||| |||||||  ||||||||||||| |||||||||| || |||||||||||||
Sbjct: 54312 ctctggtccatggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtc 54253

                                                                         
Query: 62    gtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgcc---ggag 118
              |||||||| | ||||||||||||  |||||||||||||||||||||||| ||   | ||
Sbjct: 54252 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 54193

                                                                         
Query: 119   aagcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggcc 178
             | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 54192 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 54133

                        
Query: 179   gccggcggcgc 189
             |||||||||||
Sbjct: 54132 gccggcggcgc 54122



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  224 bits (113), Expect = 1e-55
 Identities = 134/141 (95%)
 Strand = Plus / Minus

                                                                            
Query: 72       cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
                |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||
Sbjct: 25183511 cgcagttcggctacttcaaggtgctcgggaagggtctgctgccggagaagcccatcgtcg 25183452

                                                                            
Query: 132      tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
                ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 25183451 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccg 25183392

                                     
Query: 192      tcgtgctcgtcgcctagggtt 212
                ||||||||  |||||||||||
Sbjct: 25183391 tcgtgctcaccgcctagggtt 25183371



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  224 bits (113), Expect = 1e-55
 Identities = 173/191 (90%), Gaps = 4/191 (2%)
 Strand = Plus / Plus

                                                                            
Query: 3        ctctggtcc-tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtc 61
                ||||||||| |||||||  ||||||||||||| |||||||||| || |||||||||||||
Sbjct: 16593364 ctctggtccatggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtc 16593423

                                                                            
Query: 62       gtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgcc---ggag 118
                 |||||||| | ||||||||||||  |||||||||||||||||||||||| ||   | ||
Sbjct: 16593424 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 16593483

                                                                            
Query: 119      aagcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggcc 178
                | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16593484 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 16593543

                           
Query: 179      gccggcggcgc 189
                |||||||||||
Sbjct: 16593544 gccggcggcgc 16593554



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 31       cgcggaggccggcggcgaca 50
                ||||||||||||||||||||
Sbjct: 11140193 cgcggaggccggcggcgaca 11140174



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 28      ggccgcggaggccggcggcg 47
               ||||||||||||||||||||
Sbjct: 1959653 ggccgcggaggccggcggcg 1959634



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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           PAC clone:P0616D06
          Length = 153800

 Score =  224 bits (113), Expect = 1e-55
 Identities = 134/141 (95%)
 Strand = Plus / Minus

                                                                       
Query: 72  cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
           |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||
Sbjct: 182 cgcagttcggctacttcaaggtgctcgggaagggtctgctgccggagaagcccatcgtcg 123

                                                                       
Query: 132 tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 122 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccg 63

                                
Query: 192 tcgtgctcgtcgcctagggtt 212
           ||||||||  |||||||||||
Sbjct: 62  tcgtgctcaccgcctagggtt 42



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>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1003_H02
          Length = 124043

 Score =  224 bits (113), Expect = 1e-55
 Identities = 134/141 (95%)
 Strand = Plus / Minus

                                                                          
Query: 72     cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
              |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||
Sbjct: 103998 cgcagttcggctacttcaaggtgctcgggaagggtctgctgccggagaagcccatcgtcg 103939

                                                                          
Query: 132    tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
              ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 103938 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccg 103879

                                   
Query: 192    tcgtgctcgtcgcctagggtt 212
              ||||||||  |||||||||||
Sbjct: 103878 tcgtgctcaccgcctagggtt 103858



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>ref|XM_479144.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 441

 Score =  216 bits (109), Expect = 4e-53
 Identities = 130/137 (94%)
 Strand = Plus / Plus

                                                                       
Query: 72  cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
           |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||
Sbjct: 305 cgcagttcggctacttcaaggtgctcgggaagggtctgctgccggagaagcccatcgtcg 364

                                                                       
Query: 132 tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 365 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccg 424

                            
Query: 192 tcgtgctcgtcgcctag 208
           ||||||||  |||||||
Sbjct: 425 tcgtgctcaccgcctag 441



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  200 bits (101), Expect = 2e-48
 Identities = 142/155 (91%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                           
Query: 38      gccggcggcgacaaggcccccgtcgtcgacgtctcgcagttcggctacttcaaggtgctc 97
               ||||||| || ||||||||||||| |||||||| ||||||||||||||  ||||||||||
Sbjct: 4135215 gccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggctacaccaaggtgctc 4135274

                                                                           
Query: 98      ggcaaggggatgctgccg---gagaagcccatcgtcgtcaaggccaagctcatctccaag 154
               |||||||||||||| ||    |||| ||||||||||||||||||||||||||||||||||
Sbjct: 4135275 ggcaaggggatgctccccccagagaggcccatcgtcgtcaaggccaagctcatctccaag 4135334

                                                  
Query: 155     atcgccgagaagaagatcaaggccgccggcggcgc 189
                ||||||||||||||||||||||||||||||||||
Sbjct: 4135335 gtcgccgagaagaagatcaaggccgccggcggcgc 4135369



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 31      cgcggaggccggcggcgaca 50
               ||||||||||||||||||||
Sbjct: 8040499 cgcggaggccggcggcgaca 8040518



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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score =  200 bits (101), Expect = 2e-48
 Identities = 142/155 (91%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                         
Query: 38    gccggcggcgacaaggcccccgtcgtcgacgtctcgcagttcggctacttcaaggtgctc 97
             ||||||| || ||||||||||||| |||||||| ||||||||||||||  ||||||||||
Sbjct: 45229 gccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggctacaccaaggtgctc 45288

                                                                         
Query: 98    ggcaaggggatgctgccg---gagaagcccatcgtcgtcaaggccaagctcatctccaag 154
             |||||||||||||| ||    |||| ||||||||||||||||||||||||||||||||||
Sbjct: 45289 ggcaaggggatgctccccccagagaggcccatcgtcgtcaaggccaagctcatctccaag 45348

                                                
Query: 155   atcgccgagaagaagatcaaggccgccggcggcgc 189
              ||||||||||||||||||||||||||||||||||
Sbjct: 45349 gtcgccgagaagaagatcaaggccgccggcggcgc 45383



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>dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G23, full
           insert sequence
          Length = 727

 Score =  200 bits (101), Expect = 2e-48
 Identities = 142/155 (91%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 38  gccggcggcgacaaggcccccgtcgtcgacgtctcgcagttcggctacttcaaggtgctc 97
           ||||||| || ||||||||||||| |||||||| ||||||||||||||  ||||||||||
Sbjct: 317 gccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggctacaccaaggtgctc 376

                                                                       
Query: 98  ggcaaggggatgctgccg---gagaagcccatcgtcgtcaaggccaagctcatctccaag 154
           |||||||||||||| ||    |||| ||||||||||||||||||||||||||||||||||
Sbjct: 377 ggcaaggggatgctccccccagagaggcccatcgtcgtcaaggccaagctcatctccaag 436

                                              
Query: 155 atcgccgagaagaagatcaaggccgccggcggcgc 189
            ||||||||||||||||||||||||||||||||||
Sbjct: 437 gtcgccgagaagaagatcaaggccgccggcggcgc 471



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>gb|AY103771.1| Zea mays PCO152633 mRNA sequence
          Length = 740

 Score =  198 bits (100), Expect = 8e-48
 Identities = 168/190 (88%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  tggtgccgtccgacaaggccgcggaggccggcggcg---acaaggcccccgtcgtcgacg 68
           |||||||  ||| ||||||||||||||| | |||||   || |||||||  |||||||||
Sbjct: 310 tggtgcccgccggcaaggccgcggaggcggccggcgcggaccaggccccgctcgtcgacg 369

                                                                       
Query: 69  tctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcg 128
           |  ||||||||||||||||||||||||||||||||||||||||||||   | ||||||||
Sbjct: 370 tgacgcagttcggctacttcaaggtgctcggcaaggggatgctgccgtccaggcccatcg 429

                                                                       
Query: 129 tcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcg 188
           |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||
Sbjct: 430 tcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggctgccggaggcg 489

                     
Query: 189 ctgtcgtgct 198
           | ||| ||||
Sbjct: 490 ccgtcctgct 499



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>gb|BT016406.1| Zea mays clone Contig239 mRNA sequence
          Length = 1257

 Score =  194 bits (98), Expect = 1e-46
 Identities = 152/170 (89%)
 Strand = Plus / Minus

                                                                       
Query: 40  cggcggcgacaaggcccccgtcgtcgacgtctcgcagttcggctacttcaaggtgctcgg 99
           ||||||||||||||||||     |||||||| ||||||||||||||||||||||||||||
Sbjct: 368 cggcggcgacaaggccccgcagatcgacgtcacgcagttcggctacttcaaggtgctcgg 309

                                                                       
Query: 100 caaggggatgctgccggagaagcccatcgtcgtcaaggccaagctcatctccaagatcgc 159
            |||||| ||||||||   |||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 308 gaagggggtgctgccgccaaagcccattgtcgtcaaggccaagctcatctccaaggtcgc 249

                                                             
Query: 160 cgagaagaagatcaaggccgccggcggcgctgtcgtgctcgtcgcctagg 209
           |||||||||||||||||| || |||||||| |||||||||  ||||||||
Sbjct: 248 cgagaagaagatcaaggcagcaggcggcgccgtcgtgctcaccgcctagg 199



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>gb|AY103571.1| Zea mays PCO153825 mRNA sequence
          Length = 725

 Score =  194 bits (98), Expect = 1e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 12  tggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtcgtcgacgtct 71
           |||||||  |||| ||||| ||||||||||||  ||||||||||||     |||||||| 
Sbjct: 308 tggtgcccgccgaaaaggcggcggaggccggcctcgacaaggccccgcagatcgacgtca 367

                                                                       
Query: 72  cgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaagcccatcgtcg 131
           |||||||||||||||||||||||||||| |||||| ||||||||   |||||||| ||||
Sbjct: 368 cgcagttcggctacttcaaggtgctcgggaagggggtgctgccgcccaagcccattgtcg 427

                                                                       
Query: 132 tcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccggcggcgctg 191
           ||||||||||||||||||||||| |||||||||||||||||||||| || ||||| || |
Sbjct: 428 tcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggggccg 487

                             
Query: 192 tcgtgctcgtcgcctagg 209
           ||||||||  ||||||||
Sbjct: 488 tcgtgctcaccgcctagg 505



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>dbj|AB077113.1| Prunus persica mRNA, microsatellite marker M9a
          Length = 630

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 131 gtcaaggccaagctcatctccaagatcgccgagaagaagatcaagg 176
           |||||||||||||||||||||||||  || ||||||||||||||||
Sbjct: 414 gtcaaggccaagctcatctccaagacagctgagaagaagatcaagg 459



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>gb|BC064441.1| Danio rerio zgc:77235, mRNA (cDNA clone MGC:77235 IMAGE:6963142),
           complete cds
          Length = 505

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 80  ggctacttcaaggtgctcggcaaggggatgctgcc 114
           ||||||||||||||||| |||||||||| ||||||
Sbjct: 326 ggctacttcaaggtgctgggcaaggggaagctgcc 360



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>ref|NM_200030.1| Danio rerio zgc:77235 (zgc:77235), mRNA
          Length = 505

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 80  ggctacttcaaggtgctcggcaaggggatgctgcc 114
           ||||||||||||||||| |||||||||| ||||||
Sbjct: 326 ggctacttcaaggtgctgggcaaggggaagctgcc 360



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>gb|AY961477.1| Phytophthora infestans clone MY-19-H-09 ribosomal protein L27 mRNA,
           complete cds
          Length = 545

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 79  cggctacttcaaggtgctcggcaaggg 105
           |||||||||||||||||||||||||||
Sbjct: 325 cggctacttcaaggtgctcggcaaggg 351



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>ref|NM_191158.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 176 gccgccggcggcgctgtcgtgctcgtcgcc 205
           |||||||||| |||||||||||||||||||
Sbjct: 723 gccgccggcgccgctgtcgtgctcgtcgcc 752



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>ref|XM_501165.1| Yarrowia lipolytica CLIB122, YALI0B21076g predicted mRNA
          Length = 450

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 147 tctccaagatcgccgagaagaagatcaaggccgc 180
           ||||| ||||||| ||||||||||||||||||||
Sbjct: 389 tctccgagatcgctgagaagaagatcaaggccgc 422



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 176      gccgccggcggcgctgtcgtgctcgtcgcc 205
                |||||||||| |||||||||||||||||||
Sbjct: 31042199 gccgccggcgccgctgtcgtgctcgtcgcc 31042228



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      gccggagaagcccatcgtcg 131
                ||||||||||||||||||||
Sbjct: 22387425 gccggagaagcccatcgtcg 22387406



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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 176   gccgccggcggcgctgtcgtgctcgtcgcc 205
             |||||||||| |||||||||||||||||||
Sbjct: 99178 gccgccggcgccgctgtcgtgctcgtcgcc 99207



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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                 
Query: 147     tctccaagatcgccgagaagaagatcaaggccgc 180
               ||||| ||||||| ||||||||||||||||||||
Sbjct: 2770717 tctccgagatcgctgagaagaagatcaaggccgc 2770750



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>gb|AF051765.1|AF051765 Picea mariana putative 60S ribosomal protein L27a (Sb72) gene,
           Sb72-523 allele, partial cds
          Length = 468

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 120 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaagg 176
           |||| ||||| |||||||||||||| || || ||| | |||||||| ||||||||||
Sbjct: 128 agcctatcgtagtcaaggccaagcttatttctaagctggccgagaaaaagatcaagg 184



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>gb|AF051764.1|AF051764 Picea mariana putative 60S ribosomal protein L27a (Sb72) gene,
           Sb72-515 allele, partial cds
          Length = 449

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 120 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaagg 176
           |||| ||||| |||||||||||||| || || ||| | |||||||| ||||||||||
Sbjct: 117 agcctatcgtagtcaaggccaagcttatttctaagctggccgagaaaaagatcaagg 173



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>gb|AF051252.1|AF051252 Picea mariana probable 60S ribosomal protein L27a (Sb72) mRNA,
           partial cds
          Length = 577

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 120 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaagg 176
           |||| ||||| |||||||||||||| || || ||| | |||||||| ||||||||||
Sbjct: 175 agcctatcgtagtcaaggccaagcttatttctaagctggccgagaaaaagatcaagg 231



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>dbj|AB042856.1| Panax ginseng mRNA for 60S ribosomal protein L27a, complete cds
          Length = 590

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 125 atcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaagg 176
           ||||| || |||||||||||| | |||||||  || ||||||||||||||||
Sbjct: 374 atcgttgtgaaggccaagctcgtgtccaagactgcggagaagaagatcaagg 425



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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                     
Query: 129    tcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccgg 183
              ||||||||||||   || |||||||| | |||||| ||||||||||||| |||||
Sbjct: 371025 tcgtcaaggccagattcgtctccaagctagccgaggagaagatcaaggctgccgg 370971



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 172     caaggccgccggcggcgctgtcg 194
               |||||||||||||||||||||||
Sbjct: 3343430 caaggccgccggcggcgctgtcg 3343452



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 153     agatcgccgagaagaagatcaagg 176
               ||||||||||||||||||| ||||
Sbjct: 2626875 agatcgccgagaagaagatgaagg 2626898



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    cggcgctgtcgtgctcgtcg 203
              ||||||||||||||||||||
Sbjct: 666122 cggcgctgtcgtgctcgtcg 666103



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>gb|AY116644.1| Streptomyces viridifaciens amino acid aminotransfease gene, partial
             cds; ketol-acid reductioisomerase, acetolactate synthetase
             small subunit, acetolactate synthetase large subunit,
             complete cds; azoxy antibiotic valanimycin gene cluster,
             complete sequence; and putative transferase, and putative
             secreted protein genes, complete cds
          Length = 24613

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 34    ggaggccggcggcgacaaggcccccgtcgtc 64
             |||||||||||||||||||||| | ||||||
Sbjct: 10844 ggaggccggcggcgacaaggcctcggtcgtc 10874



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>ref|NM_210867.1| Eremothecium gossypii AFL035Cp (AFL035C), mRNA
          Length = 450

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 129 tcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgccgg 183
           ||||||||||||   || |||||||| | |||||| ||||||||||||| |||||
Sbjct: 371 tcgtcaaggccagattcgtctccaagctagccgaggagaagatcaaggctgccgg 425



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>dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39H01, TM0172,
             complete sequence
          Length = 127731

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 134   aaggccaagctcatctccaagatcgccgagaagaagatcaagg 176
             ||||| |||||||| || ||||| || ||||||||||||||||
Sbjct: 97352 aaggcgaagctcatttcgaagattgctgagaagaagatcaagg 97310



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>ref|XM_475150.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1656

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 27  aggccgcggaggccggcggcg 47
           |||||||||||||||||||||
Sbjct: 170 aggccgcggaggccggcggcg 150



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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0025P09, complete sequence
          Length = 167318

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    aggccgcggaggccggcggcg 47
             |||||||||||||||||||||
Sbjct: 99241 aggccgcggaggccggcggcg 99221



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>ref|XM_883456.1| Leishmania major strain Friedlin hypothetical protein (L2743.03)
            partial mRNA
          Length = 2574

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  cggcggcgctgtcgtgctcgtcgcc 205
            |||||||||||||||| ||||||||
Sbjct: 1168 cggcggcgctgtcgtgttcgtcgcc 1144



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>ref|XM_754375.1| Ustilago maydis 521 hypothetical protein (UM03321.1) partial mRNA
          Length = 564

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 tcgccgagaagaagatcaagg 176
           |||||||||||||||||||||
Sbjct: 512 tcgccgagaagaagatcaagg 532



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>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 181    cggcggcgctgtcgtgctcgtcgcc 205
              |||||||||||||||| ||||||||
Sbjct: 110338 cggcggcgctgtcgtgttcgtcgcc 110314



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>ref|XM_539020.2| PREDICTED: Canis familiaris similar to 5T4 oncofetal trophoblast
           glycoprotein (LOC481899), mRNA
          Length = 2747

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 29  gccgcggaggccggcggcgac 49
           |||||||||||||||||||||
Sbjct: 901 gccgcggaggccggcggcgac 881



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>gb|AC092148.6| Homo sapiens BAC clone RP11-95L23 from 7, complete sequence
          Length = 40101

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   ttagtttgttattctggttcc 314
             |||||||||||||||||||||
Sbjct: 25989 ttagtttgttattctggttcc 25969



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>emb|X86552.1|BJDNASHC B.japonicum shc gene
          Length = 5003

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   ggaggccggcggcgacaaggc 54
            |||||||||||||||||||||
Sbjct: 4037 ggaggccggcggcgacaaggc 4057



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>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   aggccgccggcggcgctgtcg 194
             |||||||||||||||||||||
Sbjct: 90214 aggccgccggcggcgctgtcg 90194



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 27       aggccgcggaggccggcggcg 47
                |||||||||||||||||||||
Sbjct: 17839287 aggccgcggaggccggcggcg 17839267



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      ggaggccggcggcgacaagg 53
               ||||||||||||||||||||
Sbjct: 5065097 ggaggccggcggcgacaagg 5065078



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 34      ggaggccggcggcgacaaggc 54
               |||||||||||||||||||||
Sbjct: 3316196 ggaggccggcggcgacaaggc 3316216



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     agatcgccgagaagaagatcaagg 176
               ||||||||||||||||||| ||||
Sbjct: 5959778 agatcgccgagaagaagatgaagg 5959755



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>gb|AY293853.1| Holosticha sp. WJC-2003 micronucleus, complete genome
          Length = 10116

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  atcgttagtttgttattctg 309
            ||||||||||||||||||||
Sbjct: 9880 atcgttagtttgttattctg 9861



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>ref|XM_482082.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3262

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   ccgacaaggccgcggaggccggcg 44
            ||||||||||||||| ||||||||
Sbjct: 1865 ccgacaaggccgcggcggccggcg 1842



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    cgagaagaagatcaaggccg 179
              ||||||||||||||||||||
Sbjct: 945911 cgagaagaagatcaaggccg 945930



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>ref|NM_192983.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 801

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gccggagaagcccatcgtcg 131
           ||||||||||||||||||||
Sbjct: 591 gccggagaagcccatcgtcg 572



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>ref|XM_470196.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  ggccgcggaggccggcggcg 47
           ||||||||||||||||||||
Sbjct: 300 ggccgcggaggccggcggcg 319



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>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12,
              complete sequence
          Length = 187523

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ggaggccggcggcgacaagg 53
              ||||||||||||||||||||
Sbjct: 159682 ggaggccggcggcgacaagg 159663



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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     cccgtcgtcgacgtctcgca 75
              ||||||||||||||||||||
Sbjct: 110737 cccgtcgtcgacgtctcgca 110756



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>gb|AY423269.1| Streptomyces diastaticus 108 cytochrome P450 monooxygenase (mnp1),
            type I polyketide synthase (mnp2), and cytochrome P450
            monooxygenase (mnp3) genes, complete cds
          Length = 13513

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggccgcggaggccggcggcg 47
            ||||||||||||||||||||
Sbjct: 4661 ggccgcggaggccggcggcg 4680



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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 153     agatcgccgagaagaagatcaagg 176
               ||||||||||||||||||| ||||
Sbjct: 1477344 agatcgccgagaagaagatgaagg 1477367



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>gb|AC004112.2| Homo sapiens BAC clone CTA-313E3 from 7, complete sequence
          Length = 155536

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   agtttgttattctggttcct 315
             ||||||||||||||||||||
Sbjct: 94517 agtttgttattctggttcct 94498



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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      caaggccgcggaggccggcg 44
               ||||||||||||||||||||
Sbjct: 3366381 caaggccgcggaggccggcg 3366362



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     agatcaaggccgccggcggc 187
               ||||||||||||||||||||
Sbjct: 2057804 agatcaaggccgccggcggc 2057823



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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    cgagaagaagatcaaggccg 179
              ||||||||||||||||||||
Sbjct: 905269 cgagaagaagatcaaggccg 905288



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>gb|AC146143.2| Pan troglodytes BAC clone RP43-37I19 from 7, complete sequence
          Length = 188333

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   agtttgttattctggttcct 315
             ||||||||||||||||||||
Sbjct: 73411 agtttgttattctggttcct 73392



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>ref|XM_762522.1| Giardia lamblia ATCC 50803 60S ribosomal protein L27A
           (GLP_576_8571_8122) partial mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 77  ttcggctacttcaaggtgctcggc 100
           ||||||| ||||||||||||||||
Sbjct: 319 ttcggcttcttcaaggtgctcggc 342



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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 153     agatcgccgagaagaagatcaagg 176
               ||||||||||||||||||| ||||
Sbjct: 1733134 agatcgccgagaagaagatgaagg 1733157



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     agatcgccgagaagaagatcaagg 176
               ||||||||||||||||||| ||||
Sbjct: 3552072 agatcgccgagaagaagatgaagg 3552049



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>emb|AL357623.14| Human DNA sequence from clone RP11-342E24 on chromosome 9 Contains part
             of the RALGPS1A gene for Ral guanine nucleotide exchange
             factor RalGPS1A (RALGEF2, KIAA0351), complete sequence
          Length = 39420

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   ggttcctgtgtggtaaacca 328
             ||||||||||||||||||||
Sbjct: 25445 ggttcctgtgtggtaaacca 25464



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>emb|AL157883.15| Human DNA sequence from clone RP11-360J12 on chromosome 9q21.12-21.32
             Contains an orthodenticle homolog 2 (Drosophila) (OTX2)
             pseudogene, complete sequence
          Length = 176870

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   tctatatcttaagtactagt 255
             ||||||||||||||||||||
Sbjct: 12107 tctatatcttaagtactagt 12126



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>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    ggccgcggaggccggcggcg 47
             ||||||||||||||||||||
Sbjct: 15756 ggccgcggaggccggcggcg 15775



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>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    gatgctgccggagaagccca 125
              ||||||||||||||||||||
Sbjct: 221830 gatgctgccggagaagccca 221849



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>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0011G21, from chromosome 3, complete sequence
          Length = 142401

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    cgcggaggccggcggcgaca 50
             ||||||||||||||||||||
Sbjct: 56787 cgcggaggccggcggcgaca 56768



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>gb|DQ397841.1| Cenarchaeum symbiosum clone C06A09, complete sequence
          Length = 38485

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   caaggggatgctgccggagaagcc 123
             ||||||||| ||||||||||||||
Sbjct: 17090 caaggggatactgccggagaagcc 17067



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    cggcgctgtcgtgctcgtcg 203
              ||||||||||||||||||||
Sbjct: 508425 cggcgctgtcgtgctcgtcg 508406



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>gb|AE011921.1| Xanthomonas axonopodis pv. citri str. 306,  section 299 of 469 of the
            complete genome
          Length = 10062

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   caaggccgcggaggccggcg 44
            ||||||||||||||||||||
Sbjct: 2862 caaggccgcggaggccggcg 2843



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>gb|AE011811.1| Xanthomonas axonopodis pv. citri str. 306,  section 189 of 469 of the
            complete genome
          Length = 10644

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  agatcaaggccgccggcggc 187
            ||||||||||||||||||||
Sbjct: 7620 agatcaaggccgccggcggc 7639



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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 25      caaggccgcggaggccggcggcga 48
               |||||||| |||||||||||||||
Sbjct: 3545855 caaggccgaggaggccggcggcga 3545832



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>gb|AF385625.1|AF385625 Sus scrofa interleukin-13 gene, complete cds
          Length = 2579

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 tcaaggccaagctcatctcc 151
           ||||||||||||||||||||
Sbjct: 451 tcaaggccaagctcatctcc 432



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 21       ccgacaaggccgcggaggccggcg 44
                ||||||||||||||| ||||||||
Sbjct: 17644782 ccgacaaggccgcggcggccggcg 17644805



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 25      caaggccgcggaggccggcg 44
               ||||||||||||||||||||
Sbjct: 6665957 caaggccgcggaggccggcg 6665976



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>gb|AE004714.1| Pseudomonas aeruginosa PAO1, section 275 of 529 of the complete
            genome
          Length = 10366

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  agatcgccgagaagaagatc 172
            ||||||||||||||||||||
Sbjct: 8712 agatcgccgagaagaagatc 8731



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>gb|AE004607.1| Pseudomonas aeruginosa PAO1, section 168 of 529 of the complete
            genome
          Length = 10160

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   cgtcgacgtctcgcagttcg 80
            ||||||||||||||||||||
Sbjct: 5071 cgtcgacgtctcgcagttcg 5052



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>ref|XM_215469.3| PREDICTED: Rattus norvegicus microtubule-associated protein 1b
            (Map1b), mRNA
          Length = 10491

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   gacaaggccgcggaggccgg 42
            ||||||||||||||||||||
Sbjct: 3294 gacaaggccgcggaggccgg 3313



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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    gaagatcaaggccgccggcg 185
              ||||||||||||||||||||
Sbjct: 180473 gaagatcaaggccgccggcg 180454



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>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0503B05
          Length = 156814

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    cgcggaggccggcggcgaca 50
             ||||||||||||||||||||
Sbjct: 28692 cgcggaggccggcggcgaca 28711



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>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672C09
          Length = 145655

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gccggagaagcccatcgtcg 131
             ||||||||||||||||||||
Sbjct: 11563 gccggagaagcccatcgtcg 11544



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>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013G02
          Length = 163419

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gccggagaagcccatcgtcg 131
             ||||||||||||||||||||
Sbjct: 84695 gccggagaagcccatcgtcg 84676



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>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0436B06
          Length = 148947

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     ccgacaaggccgcggaggccggcg 44
              ||||||||||||||| ||||||||
Sbjct: 121432 ccgacaaggccgcggcggccggcg 121455



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>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1705_C03
          Length = 118339

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    ccgacaaggccgcggaggccggcg 44
             ||||||||||||||| ||||||||
Sbjct: 30171 ccgacaaggccgcggcggccggcg 30194



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>dbj|AK109328.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H11, full
           insert sequence
          Length = 768

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  cgcggaggccggcggcgaca 50
           ||||||||||||||||||||
Sbjct: 307 cgcggaggccggcggcgaca 288



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>dbj|AK106657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-G08, full
           insert sequence
          Length = 1516

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  cgcggaggccggcggcgaca 50
           ||||||||||||||||||||
Sbjct: 443 cgcggaggccggcggcgaca 424



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>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full
            insert sequence
          Length = 3262

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   ccgacaaggccgcggaggccggcg 44
            ||||||||||||||| ||||||||
Sbjct: 1865 ccgacaaggccgcggcggccggcg 1842



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>gb|AC147652.4| Pan troglodytes BAC clone RP43-136A3 from chromosome 7, complete
             sequence
          Length = 196621

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   agtttgttattctggttcct 315
             ||||||||||||||||||||
Sbjct: 98541 agtttgttattctggttcct 98522



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>emb|X60370.1|RRMAP1B5 R.norvegicus mRNA for microtubule associated protein IB
          Length = 7095

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   gacaaggccgcggaggccgg 42
            ||||||||||||||||||||
Sbjct: 2842 gacaaggccgcggaggccgg 2861



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>emb|AJ628018.2| Streptomyces sp. SCC 2136 deoxysugar biosynthetic gene cluster
          Length = 77550

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 172   caaggccgccggcggcgctgtcgt 195
             |||||||||||||||| |||||||
Sbjct: 38159 caaggccgccggcggcactgtcgt 38136



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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 78      tcggctacttcaaggtgctcggca 101
               |||||| |||||||||||||||||
Sbjct: 2174312 tcggctccttcaaggtgctcggca 2174335



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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 85      cttcaaggtgctcggcaagg 104
               ||||||||||||||||||||
Sbjct: 1531646 cttcaaggtgctcggcaagg 1531665



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>emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chromosome 4, complete
             sequence
          Length = 216239

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   caagacatcgttagtttgtt 303
             ||||||||||||||||||||
Sbjct: 23637 caagacatcgttagtttgtt 23618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,518,816
Number of Sequences: 3902068
Number of extensions: 2518816
Number of successful extensions: 55163
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53158
Number of HSP's gapped (non-prelim): 1993
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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