Clone Name | basdf20 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_464920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2793 Score = 652 bits (329), Expect = 0.0 Identities = 482/533 (90%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || ||| Sbjct: 103 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 162 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 198 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||| Sbjct: 163 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 222 Query: 199 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 258 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 223 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 282 Query: 259 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 318 | ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| Sbjct: 283 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 342 Query: 319 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 378 | || |||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 343 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 402 Query: 379 agccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttgattatgg 438 ||||||| ||| |||| ||||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 403 agccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttgaccatgg 462 Query: 439 gatgtcatgctcggatatctacccctgaagctcaacttggattaccagagctaactcttg 498 | || |||||||||||||||||||||||||||||||||||| |||||||| | ||||| | Sbjct: 463 gttgccatgctcggatatctacccctgaagctcaacttggactaccagagttgactctgg 522 Query: 499 gcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgcccaaag 558 || | ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 523 gcataattcctggatttggaggaacccagcgtctgccaaggcttgtaggtctgcccaaag 582 Query: 559 caatagaaatgatgctgcaatcgaagttcattacggcgaaggaaggaaaagaa 611 |||||||||||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 583 caatagaaatgatgctgcaatcaaagttcatcacagcaaaggaagggaaagaa 635
>gb|AF442962.1|AF442962 Oryza sativa peroxisomal multifunctional protein mRNA, complete cds Length = 2637 Score = 652 bits (329), Expect = 0.0 Identities = 482/533 (90%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || ||| Sbjct: 181 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 240 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 198 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||| Sbjct: 241 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 300 Query: 199 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 258 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 301 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 360 Query: 259 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 318 | ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| Sbjct: 361 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 420 Query: 319 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 378 | || |||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 421 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 480 Query: 379 agccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttgattatgg 438 ||||||| ||| |||| ||||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 481 agccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttgaccatgg 540 Query: 439 gatgtcatgctcggatatctacccctgaagctcaacttggattaccagagctaactcttg 498 | || |||||||||||||||||||||||||||||||||||| |||||||| | ||||| | Sbjct: 541 gttgccatgctcggatatctacccctgaagctcaacttggactaccagagttgactctgg 600 Query: 499 gcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgcccaaag 558 || | ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 601 gcataattcctggatttggaggaacccagcgtctgccaaggcttgtaggtctgcccaaag 660 Query: 559 caatagaaatgatgctgcaatcgaagttcattacggcgaaggaaggaaaagaa 611 |||||||||||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 661 caatagaaatgatgctgcaatcaaagttcatcacagcaaaggaagggaaagaa 713
>dbj|AK103620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133M03, full insert sequence Length = 4430 Score = 652 bits (329), Expect = 0.0 Identities = 482/533 (90%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || ||| Sbjct: 112 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 171 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 198 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||| Sbjct: 172 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 231 Query: 199 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 258 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 232 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 291 Query: 259 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 318 | ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| Sbjct: 292 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 351 Query: 319 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 378 | || |||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 352 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 411 Query: 379 agccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttgattatgg 438 ||||||| ||| |||| ||||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 412 agccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttgaccatgg 471 Query: 439 gatgtcatgctcggatatctacccctgaagctcaacttggattaccagagctaactcttg 498 | || |||||||||||||||||||||||||||||||||||| |||||||| | ||||| | Sbjct: 472 gttgccatgctcggatatctacccctgaagctcaacttggactaccagagttgactctgg 531 Query: 499 gcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgcccaaag 558 || | ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 532 gcataattcctggatttggaggaacccagcgtctgccaaggcttgtaggtctgcccaaag 591 Query: 559 caatagaaatgatgctgcaatcgaagttcattacggcgaaggaaggaaaagaa 611 |||||||||||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 592 caatagaaatgatgctgcaatcaaagttcatcacagcaaaggaagggaaagaa 644
>dbj|AK103234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123F01, full insert sequence Length = 3428 Score = 652 bits (329), Expect = 0.0 Identities = 482/533 (90%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || ||| Sbjct: 105 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 164 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 198 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||| Sbjct: 165 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 224 Query: 199 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 258 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 225 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 284 Query: 259 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 318 | ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| Sbjct: 285 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 344 Query: 319 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 378 | || |||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 345 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 404 Query: 379 agccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttgattatgg 438 ||||||| ||| |||| ||||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 405 agccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttgaccatgg 464 Query: 439 gatgtcatgctcggatatctacccctgaagctcaacttggattaccagagctaactcttg 498 | || |||||||||||||||||||||||||||||||||||| |||||||| | ||||| | Sbjct: 465 gttgccatgctcggatatctacccctgaagctcaacttggactaccagagttgactctgg 524 Query: 499 gcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgcccaaag 558 || | ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 525 gcataattcctggatttggaggaacccagcgtctgccaaggcttgtaggtctgcccaaag 584 Query: 559 caatagaaatgatgctgcaatcgaagttcattacggcgaaggaaggaaaagaa 611 |||||||||||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 585 caatagaaatgatgctgcaatcaaagttcatcacagcaaaggaagggaaagaa 637
>dbj|AK073294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025B12, full insert sequence Length = 2793 Score = 644 bits (325), Expect = 0.0 Identities = 481/533 (90%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| ||||||||||| |||||||||| ||||| |||||||||||| || ||| Sbjct: 103 ccatggcgggggcgatccgcgtcgccatggaggtgggcgccgacggcgtcgcggtcgtca 162 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 198 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||| Sbjct: 163 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 222 Query: 199 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 258 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 223 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 282 Query: 259 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 318 | ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| Sbjct: 283 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 342 Query: 319 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 378 | || |||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 343 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 402 Query: 379 agccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttgattatgg 438 ||||||| ||| |||| ||||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 403 agccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttgaccatgg 462 Query: 439 gatgtcatgctcggatatctacccctgaagctcaacttggattaccagagctaactcttg 498 | || |||||||||||||||||||||||||||||||||||| |||||||| | ||||| | Sbjct: 463 gttgccatgctcggatatctacccctgaagctcaacttggactaccagagttgactctgg 522 Query: 499 gcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgcccaaag 558 || | ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 523 gcataattcctggatttggaggaacccagcgtctgccaaggcttgtaggtctgcccaaag 582 Query: 559 caatagaaatgatgctgcaatcgaagttcattacggcgaaggaaggaaaagaa 611 |||||||||||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 583 caatagaaatgatgctgcaatcaaagttcatcacagcaaaggaagggaaagaa 635
>gb|AF220609.1| Oryza sativa multifunctional protein mRNA, complete cds Length = 2241 Score = 618 bits (312), Expect = e-174 Identities = 465/516 (90%) Strand = Plus / Plus Query: 99 gtcaccatggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtc 158 |||||||||||||| ||||| |||||||||||| || ||||||||||||||||||| ||| Sbjct: 1 gtcaccatggaggtgggcgccgacggcgtcgcggtcgtcaccatctgcaacccgcccgtc 60 Query: 159 aatgctctgcaccccatcatcatccaggggctcaaggagaagtacgcggaggccatggat 218 ||||| ||||| ||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 61 aatgcgctgcatcccatcatcatccagggattgaaggagaagtacgcggaggcgatggat 120 Query: 219 cgcgacgacgtcaaggccatcgtgctcactggtgctgcggggaaattttgtggaggcttt 278 ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 121 cgcgacgacgtcaaggccatcgtgctcaccggtgctggaggcaaattttgtggaggcttt 180 Query: 279 gatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgatgta 338 ||||||||||| |||||| ||||||| |||||||| |||| || ||||||||||||||| Sbjct: 181 gatatcaatgtgttcacagaagttcacaagactggaaatgtatctcttatgcctgatgta 240 Query: 339 tctgttgagcttgtgtcaaacatgatggaagatggcaaaaagccttctgtttctgcaatt 398 ||||||||||||||||| || ||||||||| |||||||||||||| ||| |||| ||| Sbjct: 241 tctgttgagcttgtgtcgaatttgatggaagcgggcaaaaagccttcagttgctgccatt 300 Query: 399 caaggccttgctcttggtggtggtctagagttgattatgggatgtcatgctcggatatct 458 |||||||||||||||||||| ||| | ||||||| ||||| || ||||||||||||||| Sbjct: 301 caaggccttgctcttggtggcggtttggagttgaccatgggttgccatgctcggatatct 360 Query: 459 acccctgaagctcaacttggattaccagagctaactcttggcgtgattcctggatttgga 518 ||||||||||||||||||||| ||||||| | ||||| ||| | ||||||||||||||| Sbjct: 361 acccctgaagctcaacttggactaccagaattgactctgggcataattcctggatttgga 420 Query: 519 ggaacccagcgtctaccgaggcttgtaggtctgcccaaagcaatagaaatgatgctgcaa 578 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ggaacccagcgtctgccaaggcttgtaggtctgcccaaagcaatagaaatgatgctgcaa 480 Query: 579 tcgaagttcattacggcgaaggaaggaaaagaacgt 614 || |||||||| || || |||||||| ||||||||| Sbjct: 481 tcaaagttcatcacagcaaaggaagggaaagaacgt 516
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || ||| Sbjct: 10000742 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 10000801 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatca 177 |||||||||||||||| |||||||| ||||| ||||||| Sbjct: 10000802 ccatctgcaacccgcccgtcaatgcgctgcatcccatca 10000840 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 178 tcatccaggggctcaaggagaagtacgcggaggccatggatcgcgacgacgtcaaggcca 237 |||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10000952 tcatccagggattgaaggagaagtacgcggaggcgatggatcgcgacgacgtcaaggcca 10001011 Query: 238 tcgtgctcactggtg 252 |||||||||| |||| Sbjct: 10001012 tcgtgctcaccggtg 10001026 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 444 catgctcggatatctacccctgaagctcaacttggattaccagagctaactcttggcgtg 503 |||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| | Sbjct: 10002333 catgctcggatatctacccctgaagctcaacttggactaccagagttgactctgggcata 10002392 Query: 504 attcctggatttggagg 520 ||||||||||||||||| Sbjct: 10002393 attcctggatttggagg 10002409 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 518 aggaacccagcgtctaccgaggcttgtaggtctgcccaaagcaatagaaatgatgctg 575 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 10002515 aggaacccagcgtctgccaaggcttgtaggtctgcccaaagcaatagaaatgatgctg 10002572 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 372 ggcaaaaagccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttg 431 |||||||||||||| ||| |||| ||||||||||||||||||||||| ||| | |||||| Sbjct: 10002161 ggcaaaaagccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttg 10002220 Query: 432 a 432 | Sbjct: 10002221 a 10002221 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 261 aaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactgg 313 ||||||||||||||||||||||||||||| |||||| ||||||| ||||||| Sbjct: 10001797 aaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactgg 10001849 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 324 cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 369 |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 10001963 cttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaag 10002008
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 79 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 138 ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || ||| Sbjct: 75435 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 75494 Query: 139 ccatctgcaacccgccagtcaatgctctgcaccccatca 177 |||||||||||||||| |||||||| ||||| ||||||| Sbjct: 75495 ccatctgcaacccgcccgtcaatgcgctgcatcccatca 75533 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 178 tcatccaggggctcaaggagaagtacgcggaggccatggatcgcgacgacgtcaaggcca 237 |||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 75645 tcatccagggattgaaggagaagtacgcggaggcgatggatcgcgacgacgtcaaggcca 75704 Query: 238 tcgtgctcactggtg 252 |||||||||| |||| Sbjct: 75705 tcgtgctcaccggtg 75719 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 444 catgctcggatatctacccctgaagctcaacttggattaccagagctaactcttggcgtg 503 |||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| | Sbjct: 77026 catgctcggatatctacccctgaagctcaacttggactaccagagttgactctgggcata 77085 Query: 504 attcctggatttggagg 520 ||||||||||||||||| Sbjct: 77086 attcctggatttggagg 77102 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 518 aggaacccagcgtctaccgaggcttgtaggtctgcccaaagcaatagaaatgatgctg 575 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 77208 aggaacccagcgtctgccaaggcttgtaggtctgcccaaagcaatagaaatgatgctg 77265 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 372 ggcaaaaagccttctgtttctgcaattcaaggccttgctcttggtggtggtctagagttg 431 |||||||||||||| ||| |||| ||||||||||||||||||||||| ||| | |||||| Sbjct: 76854 ggcaaaaagccttcagttgctgccattcaaggccttgctcttggtggcggtttggagttg 76913 Query: 432 a 432 | Sbjct: 76914 a 76914 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 261 aaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactgg 313 ||||||||||||||||||||||||||||| |||||| ||||||| ||||||| Sbjct: 76490 aaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactgg 76542 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 324 cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 369 |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 76656 cttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaag 76701
>ref|NM_119045.2| Arabidopsis thaliana AIM1 (ABNORMAL INFLORESCENCE MERISTEM); enoyl-CoA hydratase AT4G29010 (AIM1) mRNA, complete cds Length = 2849 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 276 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 335 ||||||||||||||||| |||||||| ||||||| ||| | || ||||||||||| Sbjct: 240 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 299 Query: 336 gtatctgttgagcttgtgtcaaacatgatggaaga 370 ||||||||||||||||||| ||| |||||||||| Sbjct: 300 gtatctgttgagcttgtgtgtaacctgatggaaga 334 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggaggaaccc 525 |||||||| | || |||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 430 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggaggaaccc 489 Query: 526 agcgtct 532 | ||||| Sbjct: 490 aacgtct 496
>gb|AY096659.1| Arabidopsis thaliana putative AIM1 protein (At4g29010) mRNA, complete cds Length = 2197 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 276 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 335 ||||||||||||||||| |||||||| ||||||| ||| | || ||||||||||| Sbjct: 196 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 255 Query: 336 gtatctgttgagcttgtgtcaaacatgatggaaga 370 ||||||||||||||||||| ||| |||||||||| Sbjct: 256 gtatctgttgagcttgtgtgtaacctgatggaaga 290 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggaggaaccc 525 |||||||| | || |||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 386 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggaggaaccc 445 Query: 526 agcgtct 532 | ||||| Sbjct: 446 aacgtct 452
>gb|AY072072.1| Arabidopsis thaliana putative AIM1 protein (At4g29010) mRNA, complete cds Length = 2429 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 276 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 335 ||||||||||||||||| |||||||| ||||||| ||| | || ||||||||||| Sbjct: 240 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 299 Query: 336 gtatctgttgagcttgtgtcaaacatgatggaaga 370 ||||||||||||||||||| ||| |||||||||| Sbjct: 300 gtatctgttgagcttgtgtgtaacctgatggaaga 334 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggaggaaccc 525 |||||||| | || |||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 430 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggaggaaccc 489 Query: 526 agcgtct 532 | ||||| Sbjct: 490 aacgtct 496
>gb|AY059815.1| Arabidopsis thaliana AIM1 protein (At4g29010; F19B15.40) mRNA, complete cds Length = 2416 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 276 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 335 ||||||||||||||||| |||||||| ||||||| ||| | || ||||||||||| Sbjct: 239 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 298 Query: 336 gtatctgttgagcttgtgtcaaacatgatggaaga 370 ||||||||||||||||||| ||| |||||||||| Sbjct: 299 gtatctgttgagcttgtgtgtaacctgatggaaga 333 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggaggaaccc 525 |||||||| | || |||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 429 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggaggaaccc 488 Query: 526 agcgtct 532 | ||||| Sbjct: 489 aacgtct 495
>dbj|AK221468.1| Arabidopsis thaliana mRNA for AIM1 protein, complete cds, clone: RAFL07-34-I05 Length = 1428 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 276 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 335 ||||||||||||||||| |||||||| ||||||| ||| | || ||||||||||| Sbjct: 237 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 296 Query: 336 gtatctgttgagcttgtgtcaaacatgatggaaga 370 ||||||||||||||||||| ||| |||||||||| Sbjct: 297 gtatctgttgagcttgtgtgtaacctgatggaaga 331 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggaggaaccc 525 |||||||| | || |||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 427 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggaggaaccc 486 Query: 526 agcgtct 532 | ||||| Sbjct: 487 aacgtct 493
>ref|NM_184007.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2184 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 105 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 160 ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 37 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 92
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 105 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 160 ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 13870400 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 13870455
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 105 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 160 ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 30702 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 30757
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 105 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 160 ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 107803 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 107858
>dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D07, full insert sequence Length = 2677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 105 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 160 ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 253 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 308
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 324 cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 369 ||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct: 29507 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 29462 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggagg 520 |||||||| | || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 29116 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggagg 29062
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 324 cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 369 ||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct: 54538 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 54493 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggagg 520 |||||||| | || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 54147 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggagg 54093
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 324 cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 369 ||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct: 13034 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 12989 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggagg 520 |||||||| | || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 12643 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggagg 12589
>gb|AF123253.1|AF123253 Arabidopsis thaliana AIM1 protein (AIM1) gene, complete cds Length = 7393 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 324 cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 369 ||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct: 2843 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 2888 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 466 aagctcaacttggattaccagagctaactcttggcgtgattcctggatttggagg 520 |||||||| | || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 3234 aagctcaattaggcttaccagaactgactcttggagtgattcctggttttggagg 3288
>ref|NM_185270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 122 cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 163 ||||||||| ||||||||||||| |||||| || |||||||| Sbjct: 18 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 59
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 122 cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 163 ||||||||| ||||||||||||| |||||| || |||||||| Sbjct: 45135 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 45094
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 122 cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 163 ||||||||| ||||||||||||| |||||| || |||||||| Sbjct: 3167418 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 3167377
>dbj|AK102420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093D14, full insert sequence Length = 2757 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 122 cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 163 ||||||||| ||||||||||||| |||||| || |||||||| Sbjct: 277 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 318
>ref|NM_111566.2| Arabidopsis thaliana MFP2 (MULTIFUNCTIONAL PROTEIN); enoyl-CoA hydratase AT3G06860 (MFP2) mRNA, complete cds Length = 2535 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 495 cttggcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgccc 554 ||||| || |||||||| ||||||||||| |||||||| ||| | ||||| ||||| || Sbjct: 481 cttggtgttattcctggttttggaggaacgcagcgtctcccgcgtcttgttggtctcacc 540 Query: 555 aaagc 559 ||||| Sbjct: 541 aaagc 545
>gb|AY062650.1| Arabidopsis thaliana fatty acid multifunctional protein (AtMFP2) (At3g06860; F17A9.1) mRNA, complete cds Length = 2589 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 495 cttggcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgccc 554 ||||| || |||||||| ||||||||||| |||||||| ||| | ||||| ||||| || Sbjct: 468 cttggtgttattcctggttttggaggaacgcagcgtctcccgcgtcttgttggtctcacc 527 Query: 555 aaagc 559 ||||| Sbjct: 528 aaagc 532
>gb|AY062621.1| Arabidopsis thaliana fatty acid multifunctional protein (AtMFP2) (F17A9.1) mRNA, complete cds Length = 2535 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 495 cttggcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgccc 554 ||||| || |||||||| ||||||||||| |||||||| ||| | ||||| ||||| || Sbjct: 481 cttggtgttattcctggttttggaggaacgcagcgtctcccgcgtcttgttggtctcacc 540 Query: 555 aaagc 559 ||||| Sbjct: 541 aaagc 545
>gb|AF123254.1|AF123254 Arabidopsis thaliana MFP2 mRNA, complete cds Length = 2489 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 495 cttggcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgccc 554 ||||| || |||||||| ||||||||||| |||||||| ||| | ||||| ||||| || Sbjct: 424 cttggtgttattcctggttttggaggaacgcagcgtctcccgcgtcttgttggtctcacc 483 Query: 555 aaagc 559 ||||| Sbjct: 484 aaagc 488
>emb|BX822172.1|CNS0A7D4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2419 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 495 cttggcgtgattcctggatttggaggaacccagcgtctaccgaggcttgtaggtctgccc 554 ||||| || |||||||| ||||||||||| |||||||| ||| | ||||| ||||| || Sbjct: 448 cttggtgttattcctggttttggaggaacgcagcgtctcccgcgtcttgttggtctcacc 507 Query: 555 aaagc 559 ||||| Sbjct: 508 aaagc 512
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 224 cgacgtcaaggccatcgtgctcactggtgctg 255 ||||||||||||||||||| |||| ||||||| Sbjct: 1884511 cgacgtcaaggccatcgtgatcaccggtgctg 1884542
>emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chromosome 4, complete sequence Length = 157653 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 tggaagatggcaaaaagccttc 385 |||||||||||||||||||||| Sbjct: 125801 tggaagatggcaaaaagccttc 125822
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 catcatccaggggctcaaggagaagtacg 204 |||| ||| |||||||||||||||||||| Sbjct: 3230325 catcctccgggggctcaaggagaagtacg 3230297
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 atcaccatctgcaacccgccagtcaatgc 163 |||||||||||||| ||||| |||||||| Sbjct: 492424 atcaccatctgcaatccgccggtcaatgc 492452
>emb|AJ000886.1|BNJ000886 Brassica napus multifunctional protein of glyoxysomal beta-oxidation Length = 2494 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 504 attcctggatttggaggaacccagcgtct 532 |||||||| ||||||||||| |||||||| Sbjct: 453 attcctgggtttggaggaacacagcgtct 481
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gttgagcttgtgtcaaacatg 362 ||||||||||||||||||||| Sbjct: 28204802 gttgagcttgtgtcaaacatg 28204822
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gttgagcttgtgtcaaacatg 362 ||||||||||||||||||||| Sbjct: 2831 gttgagcttgtgtcaaacatg 2851
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gttgagcttgtgtcaaacatg 362 ||||||||||||||||||||| Sbjct: 135708 gttgagcttgtgtcaaacatg 135728
>dbj|AK100322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079H12, full insert sequence Length = 3026 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gttgagcttgtgtcaaacatg 362 ||||||||||||||||||||| Sbjct: 1812 gttgagcttgtgtcaaacatg 1832
>emb|CR388225.18| Zebrafish DNA sequence from clone CH211-193C1 in linkage group 14, complete sequence Length = 153626 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 ttgtgtcaaacatgatggaag 369 ||||||||||||||||||||| Sbjct: 104975 ttgtgtcaaacatgatggaag 104955
>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence Length = 175793 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 381 ccttctgtttctgcaattcaaggcc 405 ||||||| ||||||||||||||||| Sbjct: 5647 ccttctggttctgcaattcaaggcc 5671
>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete sequence Length = 194065 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tttgatatcaatgtcttcaca 296 ||||||||||||||||||||| Sbjct: 4891 tttgatatcaatgtcttcaca 4871
>gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.1043_H_15, complete sequence Length = 99512 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 ggcaaaaagccttctgtttct 392 ||||||||||||||||||||| Sbjct: 53308 ggcaaaaagccttctgtttct 53288
>dbj|AB071299.1| Oryza sativa OsARF10 mRNA for auxin response factor 10, partial cds Length = 2100 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gttgagcttgtgtcaaacatg 362 ||||||||||||||||||||| Sbjct: 1183 gttgagcttgtgtcaaacatg 1203
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gctcaaggagaagtacgcgg 207 |||||||||||||||||||| Sbjct: 1937062 gctcaaggagaagtacgcgg 1937043
>ref|XM_800078.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510597.30) partial mRNA Length = 3453 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 aaggagaagtacgcggaggccatggatc 219 |||| |||||||||||||||||| |||| Sbjct: 1423 aaggggaagtacgcggaggccatcgatc 1450
>emb|AL358075.10| Human DNA sequence from clone RP4-533D7 on chromosome 1p34.1-35.1 Contains the 3' end of the gene for microtubule associated testis specific serine/threonine protein kinase (MAST205), the PIK3R3 gene for phosphoinositide-3-kinase regulatory subunit polypeptide 3 (p55, gamma), a cytochrome c oxidase subunit VIIb (COX7B) pseudogene, two novel genes and a CpG island, complete sequence Length = 132912 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 gctcactggtgctgcggggaaattttgt 269 |||||||| ||||| ||||||||||||| Sbjct: 51628 gctcactgatgctggggggaaattttgt 51655
>emb|BX323793.10| Zebrafish DNA sequence from clone DKEY-185P18 in linkage group 16, complete sequence Length = 170199 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 atgagactggagatgtgtca 323 |||||||||||||||||||| Sbjct: 132293 atgagactggagatgtgtca 132274
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 atcgcgacgacgtcaaggcc 236 |||||||||||||||||||| Sbjct: 2470438 atcgcgacgacgtcaaggcc 2470457
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 aagcaatagaaatgatgctg 575 |||||||||||||||||||| Sbjct: 48619 aagcaatagaaatgatgctg 48600
>ref|XM_695366.1| PREDICTED: Danio rerio hypothetical protein LOC571746 (LOC571746), mRNA Length = 1395 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 atgagactggagatgtgtca 323 |||||||||||||||||||| Sbjct: 647 atgagactggagatgtgtca 666
>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2 Length = 230573 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgacgacgtcaaggccatcg 240 |||||||||||||||||||| Sbjct: 86834 cgacgacgtcaaggccatcg 86853
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgacgacgtcaaggccatcg 240 |||||||||||||||||||| Sbjct: 2145319 cgacgacgtcaaggccatcg 2145338
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 catgatggaagatggcaaaa 378 |||||||||||||||||||| Sbjct: 130122 catgatggaagatggcaaaa 130141
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 atcgcgacgacgtcaaggcc 236 |||||||||||||||||||| Sbjct: 2490745 atcgcgacgacgtcaaggcc 2490764
>gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone hRPK.264_B_14, complete sequence Length = 120187 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ttatgcctgatgtatctgtt 344 |||||||||||||||||||| Sbjct: 23252 ttatgcctgatgtatctgtt 23233
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 gcaatagaaatgatgctgca 577 |||||||||||||||||||| Sbjct: 1821300 gcaatagaaatgatgctgca 1821281
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 tgattcctggatttggagga 521 |||||||||||||||||||| Sbjct: 95357 tgattcctggatttggagga 95338 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,924,810 Number of Sequences: 3902068 Number of extensions: 5924810 Number of successful extensions: 105451 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104918 Number of HSP's gapped (non-prelim): 526 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)