ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdf14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY220736.1| Hordeum vulgare pathogen induced protein 2-4 (PI2... 464 e-128
2ref|XM_467372.1| Oryza sativa (japonica cultivar-group), mRNA 113 4e-22
3dbj|AK070986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
4gb|AY106903.1| Zea mays PCO102102 mRNA sequence 90 5e-15
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
6dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
7gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, comple... 46 0.072
8gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, co... 44 0.28
9ref|XM_651173.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 42 1.1
10emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in ... 42 1.1
11gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, comp... 42 1.1
12gb|AC092641.2| Homo sapiens BAC clone RP11-389F18 from 2, comple... 42 1.1
13emb|BX510992.5| Zebrafish DNA sequence from clone DKEYP-93H6 in ... 42 1.1
14dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.1
15gb|L16869.1|HUM2C18X01 Homo sapiens cytochrome P-4502C18 (CYP2C1... 40 4.4
16gb|AF181895.6| Homo sapiens chromosome 8 clone CTD-2329M5 map p1... 40 4.4
17gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete seq... 40 4.4
18emb|BX000992.5| Human DNA sequence from clone RP11-431P13 on chr... 40 4.4
19emb|AL590624.8| Human DNA sequence from clone RP11-380B22 on chr... 40 4.4
20emb|AL583836.18| Human DNA sequence from clone RP11-466J14 on ch... 40 4.4
21emb|AL359094.14| Human DNA sequence from clone RP11-223P11 on ch... 40 4.4
22emb|AL161798.23| Human DNA sequence from clone RP11-108M11 on ch... 40 4.4
23emb|AL158043.14| Human DNA sequence from clone RP11-5N23 on chro... 40 4.4
24emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on ch... 40 4.4
25emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on ch... 40 4.4
26emb|AL121977.11|HSJ492P14 Human DNA sequence from clone RP3-492P... 40 4.4
27emb|AL023578.1|HS248E1 Human DNA sequence from clone RP1-248E1 o... 40 4.4
28gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cance... 40 4.4
29gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 40 4.4
30gb|AC120440.5| Homo sapiens chromosome 11, clone CTD-2013B7, com... 40 4.4
31gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, comp... 40 4.4
32gb|AC023080.6| Homo sapiens chromosome 11, clone RP11-397M16, co... 40 4.4
33gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, c... 40 4.4
34gb|AC103675.2| Homo sapiens chromosome 8, clone CTD-2329M5, comp... 40 4.4
35gb|AC032002.7| Homo sapiens chromosome 8, clone RP11-379N22, com... 40 4.4
36gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, com... 40 4.4
37gb|AC022416.5|AC022416 Homo sapiens chromosome 5 clone CTC-489P2... 40 4.4
38tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 40 4.4
39gb|AC048330.20| Homo sapiens 12 BAC RP11-334L2 (Roswell Park Can... 40 4.4
40gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complet... 40 4.4
41gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chrom... 40 4.4
42gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chrom... 40 4.4
43gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosom... 40 4.4
44gb|AC010956.12|AC010956 Homo sapiens, clone RP11-5N23, complete ... 40 4.4
45gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complet... 40 4.4
46gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, co... 40 4.4
47gb|AC092882.3| Homo sapiens 12 BAC RP11-544L17 (Roswell Park Can... 40 4.4
48gb|AC135964.2| Mus musculus BAC clone RP23-306G18 from chromosom... 40 4.4
49emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chr... 40 4.4
50dbj|AP006622.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 4.4
51gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q... 40 4.4
52emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 i... 40 4.4
53gb|AY940097.1| Homo sapiens X-ray repair complementing defective... 40 4.4
54gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence 40 4.4
55gb|AC174075.1| Homo sapiens chromosome 10 clone WI2-3242N3, comp... 40 4.4
56emb|AL133273.5| Human DNA sequence from clone RP11-518F7 on chro... 40 4.4
57emb|X56452.1|HSCYP2C Human CYP2C gene for cytochrome P-450 40 4.4
58emb|AL158219.11| Human DNA sequence from clone RP5-876B19 on chr... 40 4.4
59gb|S63419.1|S63419S1 Homo sapiens (S)-mephenytoin hydroxylase as... 40 4.4
60gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, co... 40 4.4
61dbj|AB065505.1| Homo sapiens gene for seven transmembrane helix ... 40 4.4
62emb|AL672035.7| Mouse DNA sequence from clone RP23-314N8 on chro... 40 4.4

>gb|AY220736.1| Hordeum vulgare pathogen induced protein 2-4 (PI2-4) mRNA, complete
           cds
          Length = 842

 Score =  464 bits (234), Expect = e-128
 Identities = 244/246 (99%), Gaps = 1/246 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagtattgcttcc-caactgtaaagcagcaccggttatcattgtcccagccaaagaag 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gtgagtattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaag 647

                                                                       
Query: 61  ctggtgaacagtctgtgctttaaagaggggacgacaagtaggagacagcggtgcactggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ctggtgaacagtctgtgctttaaagaggggacgacaagtaggagacagcggtgcactggt 707

                                                                       
Query: 121 ttggtgttgcactttcagtttaatgtaatttagctgataagattgtgtgcatgttgttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ttggtgttgcactttcagtttaatgtaatttagctgataagattgtgtgcatgttgttgt 767

                                                                       
Query: 181 tctgaatttgtttgtagtgagaacatttattctgagcaaggtagcgagaatatattgtaa 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 768 tctgaatttgtttgtagtgagaacatttattctgagaaaggtagcgagaatatattgtaa 827

                 
Query: 241 atgctt 246
           ||||||
Sbjct: 828 atgctt 833



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>ref|XM_467372.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 933

 Score =  113 bits (57), Expect = 4e-22
 Identities = 79/85 (92%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagtattgcttcc-caactgtaaagcagcaccggttatcattgtcccagccaaagaag 60
           |||| |||||||||| ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 577 gtgaatattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaagaag 636

                                    
Query: 61  ctggtgaacagtctgtgctttaaag 85
           |||||||||||||||||||||||||
Sbjct: 637 ctggtgaacagtctgtgctttaaag 661



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>dbj|AK070986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078F08, full
           insert sequence
          Length = 933

 Score =  113 bits (57), Expect = 4e-22
 Identities = 79/85 (92%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagtattgcttcc-caactgtaaagcagcaccggttatcattgtcccagccaaagaag 60
           |||| |||||||||| ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 577 gtgaatattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaagaag 636

                                    
Query: 61  ctggtgaacagtctgtgctttaaag 85
           |||||||||||||||||||||||||
Sbjct: 637 ctggtgaacagtctgtgctttaaag 661



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>gb|AY106903.1| Zea mays PCO102102 mRNA sequence
          Length = 677

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 73/81 (90%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagtattgcttcc-caactgtaaagcagcaccggttatcattgtcccagccaaagaag 60
           ||||||||||||||| ||||||||||||||| ||  |||||||||| || |  |||||||
Sbjct: 583 gtgagtattgcttccacaactgtaaagcagccccaattatcattgtgcctgggaaagaag 642

                                
Query: 61  ctggtgaacagtctgtgcttt 81
           |||||||||||||||||||||
Sbjct: 643 ctggtgaacagtctgtgcttt 663



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                              
Query: 56       agaagctggtgaacagtctgtgctttaaag 85
                ||||||||||||||||||||||||||||||
Sbjct: 29135362 agaagctggtgaacagtctgtgctttaaag 29135391



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                         
Query: 2        gtgagtattgcttcc-caactgtaaagcagcaccggttatcattgtcccagccaaag 57
                |||| |||||||||| ||||||||||||||| || ||||||||||| |||| |||||
Sbjct: 29134809 gtgaatattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaag 29134865



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>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0680A05
          Length = 168092

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 56    agaagctggtgaacagtctgtgctttaaag 85
             ||||||||||||||||||||||||||||||
Sbjct: 25330 agaagctggtgaacagtctgtgctttaaag 25359



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                      
Query: 2     gtgagtattgcttcc-caactgtaaagcagcaccggttatcattgtcccagccaaag 57
             |||| |||||||||| ||||||||||||||| || ||||||||||| |||| |||||
Sbjct: 24777 gtgaatattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaag 24833



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>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 187    tttgtttgtagtgagaacattta 209
              |||||||||||||||||||||||
Sbjct: 131232 tttgtttgtagtgagaacattta 131210



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>gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, complete sequence
          Length = 195139

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 187    tttgtttgtagtgagaacattt 208
              ||||||||||||||||||||||
Sbjct: 156311 tttgtttgtagtgagaacattt 156290



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>ref|XM_651173.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (15.t00065)
           partial mRNA
          Length = 201

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 ttctgaatttgtttgtagtga 200
           |||||||||||||||||||||
Sbjct: 126 ttctgaatttgtttgtagtga 146



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>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8,
             complete sequence
          Length = 249728

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   ctttcagtttaatgtaattta 152
             |||||||||||||||||||||
Sbjct: 49411 ctttcagtttaatgtaattta 49431



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>gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, complete sequence
          Length = 163962

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   tgttgttgttctgaatttgtt 192
             |||||||||||||||||||||
Sbjct: 69043 tgttgttgttctgaatttgtt 69023



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>gb|AC092641.2| Homo sapiens BAC clone RP11-389F18 from 2, complete sequence
          Length = 219175

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    tgtagtgagaacatttattct 213
              |||||||||||||||||||||
Sbjct: 200396 tgtagtgagaacatttattct 200376



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>emb|BX510992.5| Zebrafish DNA sequence from clone DKEYP-93H6 in linkage group 20,
              complete sequence
          Length = 211650

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 187    tttgtttgtagtgagaacatt 207
              |||||||||||||||||||||
Sbjct: 193462 tttgtttgtagtgagaacatt 193482



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>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete
             sequence
          Length = 174547

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   aatttgtttgtagtgagaaca 205
             |||||||||||||||||||||
Sbjct: 48671 aatttgtttgtagtgagaaca 48691



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>gb|L16869.1|HUM2C18X01 Homo sapiens cytochrome P-4502C18 (CYP2C18) gene, exon 1
          Length = 1668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  atttgtttgtagtgagaacattta 209
            |||| |||||||||||||||||||
Sbjct: 1635 atttctttgtagtgagaacattta 1658



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>gb|AF181895.6| Homo sapiens chromosome 8 clone CTD-2329M5 map p12, complete sequence
          Length = 109545

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aatttgtttgtagtgagaac 204
             ||||||||||||||||||||
Sbjct: 46511 aatttgtttgtagtgagaac 46492



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>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence
          Length = 97390

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tagctcagtagtgaagaact 290
             ||||||||||||||||||||
Sbjct: 18730 tagctcagtagtgaagaact 18711



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>emb|BX000992.5| Human DNA sequence from clone RP11-431P13 on chromosome X, complete
             sequence
          Length = 46289

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   aatttgtttgtagtgagaacattt 208
             ||||| ||||||||||||||||||
Sbjct: 34605 aatttttttgtagtgagaacattt 34582



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>emb|AL590624.8| Human DNA sequence from clone RP11-380B22 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 157779

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 60169 atttttttgtagtgagaacattta 60146



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>emb|AL583836.18| Human DNA sequence from clone RP11-466J14 on chromosome 10 Contains
            the CYP2C18 gene for  cytochrome P450 family 2 subfamily
            C polypeptide 18, a pseudogene similar to part of NADH
            dehydrogenase 4 (MTND4) and the 5' end of the CYP2C19
            gene for cytochrome P450 family 2 subfamily C polypeptide
            19, complete sequence
          Length = 115177

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  atttgtttgtagtgagaacattta 209
            |||| |||||||||||||||||||
Sbjct: 6393 atttctttgtagtgagaacattta 6416



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>emb|AL359094.14| Human DNA sequence from clone RP11-223P11 on chromosome 10, complete
            sequence
          Length = 133029

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  atttgtttgtagtgagaaca 205
            ||||||||||||||||||||
Sbjct: 5568 atttgtttgtagtgagaaca 5587



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>emb|AL161798.23| Human DNA sequence from clone RP11-108M11 on chromosome 10 Contains the
              3' end of a novel gene  (FLJ37306), a novel gene and a
              ribosomal protein S27 (metallopanstimulin 1) (RPS27)
              pseudogene, complete sequence
          Length = 134438

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    atttgtttgtagtgagaacattta 209
              |||| |||||||||||||||||||
Sbjct: 105227 atttctttgtagtgagaacattta 105250



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>emb|AL158043.14| Human DNA sequence from clone RP11-5N23 on chromosome 10p14-15.3 Contains
              the 5' end of the PRKCQ gene for protein kinase C, theta, a
              novel gene and a CpG island, complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    atttgtttgtagtgagaacattta 209
              |||||||||||||||||| |||||
Sbjct: 111958 atttgtttgtagtgagaatattta 111981



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>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
             Contains a novel gene, complete sequence
          Length = 111350

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 82353 atttttttgtagtgagaacattta 82376



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>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3
             Contains the 3' end of a novel gene, a protein associated
             with PRK1 (AWP1) pseudogene, a novel gene  (KIAA0375), a
             ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, 
             a novel gene, a ribosomal protein S29 (RPS29) pseudogene
             and a CpG island, complete sequence
          Length = 153826

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 31627 atttttttgtagtgagaacattta 31604



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>emb|AL121977.11|HSJ492P14 Human DNA sequence from clone RP3-492P14 on chromosome 6q13-15 Contains
             a single stranded DNA binding protein pseudogene, the TPBG
             gene for trophoblast glycoprotein (5T4-AG) and a CpG
             island, complete sequence
          Length = 121909

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 50481 atttatttgtagtgagaacattta 50504



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>emb|AL023578.1|HS248E1 Human DNA sequence from clone RP1-248E1 on chromosome 6q23.1-23.3
             Contains the 3' end of the MOXD1 gene for monooxygenase
             DBH-like 1 and a eukaryotic translation elongation factor
             1 alpha 1 (EEF1A1) pseudogene, complete sequence
          Length = 84107

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 76047 atttctttgtagtgagaacattta 76024



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>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166471

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 36125 atttatttgtagtgagaacattta 36148



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>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    atttgtttgtagtgagaacattta 209
              |||| |||||||||||||||||||
Sbjct: 160200 atttctttgtagtgagaacattta 160177



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>gb|AC120440.5| Homo sapiens chromosome 11, clone CTD-2013B7, complete sequence
          Length = 45460

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ggtgcactggtttggtgttg 129
             ||||||||||||||||||||
Sbjct: 21026 ggtgcactggtttggtgttg 21007



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>gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, complete sequence
          Length = 85977

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||||| |||||||||||||||||
Sbjct: 43171 atttgtgtgtagtgagaacattta 43148



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>gb|AC023080.6| Homo sapiens chromosome 11, clone RP11-397M16, complete sequence
          Length = 175832

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ggtgcactggtttggtgttg 129
             ||||||||||||||||||||
Sbjct: 79753 ggtgcactggtttggtgttg 79734



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>gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, complete sequence
          Length = 168473

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ggtgcactggtttggtgttg 129
             ||||||||||||||||||||
Sbjct: 66541 ggtgcactggtttggtgttg 66560



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>gb|AC103675.2| Homo sapiens chromosome 8, clone CTD-2329M5, complete sequence
          Length = 109550

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aatttgtttgtagtgagaac 204
             ||||||||||||||||||||
Sbjct: 46514 aatttgtttgtagtgagaac 46495



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>gb|AC032002.7| Homo sapiens chromosome 8, clone RP11-379N22, complete sequence
          Length = 74425

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 32478 atttctttgtagtgagaacattta 32455



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>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence
          Length = 185249

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   aatttgtttgtagtgagaac 204
             ||||||||||||||||||||
Sbjct: 45230 aatttgtttgtagtgagaac 45249



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>gb|AC022416.5|AC022416 Homo sapiens chromosome 5 clone CTC-489P21, complete sequence
          Length = 139980

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  atttgtttgtagtgagaacattta 209
            |||||| |||||||||||||||||
Sbjct: 6323 atttgtgtgtagtgagaacattta 6346



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>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively
               spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     aatttgtttgtagtgagaac 204
               ||||||||||||||||||||
Sbjct: 1297948 aatttgtttgtagtgagaac 1297929



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>gb|AC048330.20| Homo sapiens 12 BAC RP11-334L2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188719

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 71704 atttatttgtagtgagaacattta 71681



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>gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complete sequence
          Length = 180424

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 50031 atttctttgtagtgagaacattta 50008



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>gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chromosome unknown,
             complete sequence
          Length = 200678

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 77954 atttctttgtagtgagaacattta 77931



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>gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chromosome unknown,
             complete sequence
          Length = 154069

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 81017 atttctttgtagtgagaacattta 81040



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>gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosome 16, complete
             sequence
          Length = 223585

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tagctcagtagtgaagaact 290
             ||||||||||||||||||||
Sbjct: 46062 tagctcagtagtgaagaact 46043



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>gb|AC010956.12|AC010956 Homo sapiens, clone RP11-5N23, complete sequence
          Length = 163805

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    atttgtttgtagtgagaacattta 209
              |||||||||||||||||| |||||
Sbjct: 143023 atttgtttgtagtgagaatattta 143046



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>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence
          Length = 138778

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   tgtgtgcatgttgttgttct 183
             ||||||||||||||||||||
Sbjct: 66213 tgtgtgcatgttgttgttct 66232



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>gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, complete sequence
          Length = 179540

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ggtgcactggtttggtgttg 129
              ||||||||||||||||||||
Sbjct: 164011 ggtgcactggtttggtgttg 163992



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>gb|AC092882.3| Homo sapiens 12 BAC RP11-544L17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 49997

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 10053 atttctttgtagtgagaacattta 10030



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>gb|AC135964.2| Mus musculus BAC clone RP23-306G18 from chromosome 16, complete
             sequence
          Length = 179599

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   gctcagtagtgaagaactgc 292
             ||||||||||||||||||||
Sbjct: 58411 gctcagtagtgaagaactgc 58392



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>emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chromosome X, complete
             sequence
          Length = 227248

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tttgctgtaatctgaatcct 265
             ||||||||||||||||||||
Sbjct: 15126 tttgctgtaatctgaatcct 15107



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>dbj|AP006622.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1276E07, complete
             sequence
          Length = 114001

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ggtgcactggtttggtgttg 129
             ||||||||||||||||||||
Sbjct: 59447 ggtgcactggtttggtgttg 59428



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>gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q21, complete sequence
          Length = 226916

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    atttgtttgtagtgagaacattta 209
              |||| |||||||||||||||||||
Sbjct: 215310 atttctttgtagtgagaacattta 215333



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>emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 in linkage group 19,
              complete sequence
          Length = 169993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    tttgtttgtagtgagaacat 206
              ||||||||||||||||||||
Sbjct: 147544 tttgtttgtagtgagaacat 147563



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>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese
             hamster cells 4 (XRCC4) gene, complete cds
          Length = 279061

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||||| |||||||||||||||||
Sbjct: 88461 atttgtgtgtagtgagaacattta 88438



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>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence
          Length = 83030

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 81690 atttctttgtagtgagaacattta 81667



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>gb|AC174075.1| Homo sapiens chromosome 10 clone WI2-3242N3, complete sequence
          Length = 40411

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   atttgtttgtagtgagaaca 205
             ||||||||||||||||||||
Sbjct: 14470 atttgtttgtagtgagaaca 14451



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>emb|AL133273.5| Human DNA sequence from clone RP11-518F7 on chromosome Xq26.3-27.3,
            complete sequence
          Length = 42375

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 185  aatttgtttgtagtgagaacattt 208
            ||||| ||||||||||||||||||
Sbjct: 9785 aatttttttgtagtgagaacattt 9808



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>emb|X56452.1|HSCYP2C Human CYP2C gene for  cytochrome P-450
          Length = 2619

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  atttgtttgtagtgagaacattta 209
            |||| |||||||||||||||||||
Sbjct: 1354 atttctttgtagtgagaacattta 1377



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>emb|AL158219.11| Human DNA sequence from clone RP5-876B19 on chromosome 11, complete
             sequence
          Length = 48412

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 12417 atttttttgtagtgagaacattta 12394



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>gb|S63419.1|S63419S1 Homo sapiens (S)-mephenytoin hydroxylase associated cytochrome P450
            (CYP2C18) gene, partial sequence
          Length = 2619

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  atttgtttgtagtgagaacattta 209
            |||| |||||||||||||||||||
Sbjct: 1354 atttctttgtagtgagaacattta 1377



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>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence
          Length = 179494

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   atttgtttgtagtgagaacattta 209
             |||| |||||||||||||||||||
Sbjct: 93783 atttttttgtagtgagaacattta 93806



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>dbj|AB065505.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_68
          Length = 60989

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ggtgcactggtttggtgttg 129
             ||||||||||||||||||||
Sbjct: 40705 ggtgcactggtttggtgttg 40686



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>emb|AL672035.7| Mouse DNA sequence from clone RP23-314N8 on chromosome X, complete
             sequence
          Length = 154002

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tagctcagtagtgaagaact 290
             ||||||||||||||||||||
Sbjct: 65768 tagctcagtagtgaagaact 65749


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,368,745
Number of Sequences: 3902068
Number of extensions: 3368745
Number of successful extensions: 65976
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65855
Number of HSP's gapped (non-prelim): 119
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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