ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdf11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF009675.1|AF009675 Hordeum vulgare var. distichum soluble inorganic pyrophosphatase (Ipp) mRNA, complete cds Length = 1035 Score = 613 bits (309), Expect = e-172 Identities = 354/366 (96%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 659 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacagc-acat 717 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 |||||||| |||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct: 718 cagtgagccttctccca--cgcctccaagagatcaagcgcct---tgaagactacaagaa 772 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 832 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtagca 252 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 833 cattcagtattcgatggacctgtatgcgcagtatattctgcaaagcttaaggcagtagca 892 Query: 253 tgttggtggttgtatcgcggaaatcttgtattaataacaagtggggaatagccgagacta 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 tgttggtggttgtatcgcggaaatcttgtattaataacaagtggggaatagccgagacta 952 Query: 313 tgtgtgttataaataaatgcgcaacaatgtgtactcacactatttatgaagattaagtga 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 tgtgtgttataaataaatgcgcaacaatgtgtactcacactatttatgaagattaagtga 1012 Query: 373 tgcttt 378 |||||| Sbjct: 1013 tgcttt 1018
>gb|BT016734.1| Zea mays clone Contig567 mRNA sequence Length = 924 Score = 289 bits (146), Expect = 3e-75 Identities = 215/238 (90%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 531 ggatgacaagataatagcagtctgtgctgatgatcctgaatatcgtcactacaacgacat 590 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| || ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 591 cagtgagctgtctcctcatcgcctgcaagagatcaagcggttctttgaagattataagaa 650 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 ||||||||| || ||||| ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 651 gaatgagaataaagaggttgctgtcgatgcattcttgcctgcgaccacagctcgagaggc 710 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || ||||| |||||||||||||||||| |||| ||||| ||||||||| Sbjct: 711 cattcagtactccatggatctgtatgcgcagtatattttgcaaagcttgaggcagtag 768
>gb|AY103741.1| Zea mays PCO131913 mRNA sequence Length = 1163 Score = 289 bits (146), Expect = 3e-75 Identities = 215/238 (90%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 571 ggatgacaagataatagcagtctgtgctgatgatcctgaatatcgtcactacaacgacat 630 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| || ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 631 cagtgagctgtctcctcatcgcctgcaagagatcaagcggttctttgaagattataagaa 690 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 ||||||||| || ||||| ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 691 gaatgagaataaagaggttgctgtcgatgcattcttgcctgcgaccacagctcgagaggc 750 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || ||||| |||||||||||||||||| |||| ||||| ||||||||| Sbjct: 751 cattcagtactccatggatctgtatgcgcagtatattttgcaaagcttgaggcagtag 808
>gb|AF034947.1|AF034947 Zea mays inorganic pyrophosphatase (IPP) mRNA, complete cds Length = 942 Score = 289 bits (146), Expect = 3e-75 Identities = 215/238 (90%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 523 ggatgacaagataatagcagtctgtgctgatgatcctgaatatcgtcactacaacgacat 582 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| || ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 583 cagtgagctgtctcctcatcgcctgcaagagatcaagcggttctttgaagattataagaa 642 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 ||||||||| || ||||| ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 643 gaatgagaataaagaggttgctgtcgatgcattcttgcctgcgaccacagctcgagaggc 702 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || ||||| |||||||||||||||||| |||| ||||| ||||||||| Sbjct: 703 cattcagtactccatggatctgtatgcgcagtatattttgcaaagcttgaggcagtag 760
>ref|XM_474434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 642 Score = 281 bits (142), Expect = 8e-73 Identities = 214/238 (89%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 405 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 464 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 465 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagactacaagaa 524 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| || || || Sbjct: 525 gaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctcgtgacgc 584 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || ||||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 585 cattcagtactccatggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 642
>dbj|AK073929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073D22, full insert sequence Length = 938 Score = 281 bits (142), Expect = 8e-73 Identities = 214/238 (89%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 498 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 557 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 558 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagactacaagaa 617 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| || || || Sbjct: 618 gaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctcgtgacgc 677 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || ||||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 678 cattcagtactccatggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 735
>dbj|AK061239.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C05, full insert sequence Length = 935 Score = 281 bits (142), Expect = 8e-73 Identities = 214/238 (89%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 496 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 555 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 556 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagactacaagaa 615 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| || || || Sbjct: 616 gaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctcgtgacgc 675 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || ||||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 676 cattcagtactccatggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 733
>gb|AY570726.1| Oryza sativa (japonica cultivar-group) inorganic pyrophosphatase (Ipp) mRNA, partial cds Length = 721 Score = 250 bits (126), Expect = 3e-63 Identities = 183/202 (90%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 496 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 555 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 556 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagactacaagaa 615 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| || || || Sbjct: 616 gaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctcgtgacgc 675 Query: 193 cattcagtattcgatggacctg 214 ||||||||| || ||||||||| Sbjct: 676 cattcagtactccatggacctg 697
>gb|BT019269.1| Zea mays clone Contig942.F mRNA sequence Length = 1122 Score = 242 bits (122), Expect = 7e-61 Identities = 209/238 (87%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 611 ggatgacaagataatagcagtatgtgctgacgatcctgaataccgtcactacaacgacat 552 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 551 cagcgagctgtctcctcaccgcctgcaagagatcaagcgcttctttgaagattacaagaa 492 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 || |||||||| || ||||| || ||||| ||||| || ||||| || || | || || Sbjct: 491 aaacgagaacaaagaagtcgcagttgatgcattcttgcccgcgacaacagctcaagaagc 432 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || |||||||||||||| ||||||||| |||| ||||| ||||||||| Sbjct: 431 cattcagtactccatggacctgtatgcccagtatattttgcaaagcttgaggcagtag 374
>gb|BT017161.1| Zea mays clone EL01N0368C05.c mRNA sequence Length = 654 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||| ||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 39 ggatgccaagataatagcagtatgtgctgacgatcctgaataccgtcactacaacgacat 98 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||| ||||||| ||| | || ||| ||||||||||||||||| |||||||| | |||||| Sbjct: 99 cagcgagctgtttcctccccccctgcaagagatcaagcgcttttttgaagattccaagaa 158 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 || |||||||| || ||||| || ||||| || || || ||||| || || | || || Sbjct: 159 aaacgagaacaaagaagtcgcagttgatgcatttttgcccgcgacaacagctcaagaagc 218 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||| || |||||||||||||| ||||||||| |||| ||||| ||||||||| Sbjct: 219 cattcagtactccatggacctgtatgcccagtatattttgcaaagcttgaggcagtag 276
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 93064 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 93005 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 93004 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagact 92952 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgccc 185 ||||||||||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| | Sbjct: 92851 acaagaagaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctc 92792 Query: 186 gcgaggccattcagta 201 | || ||||||||||| Sbjct: 92791 gtgacgccattcagta 92776 Score = 46.1 bits (23), Expect = 0.084 Identities = 38/43 (88%) Strand = Plus / Minus Query: 208 ggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 92637 ggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 92595
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 35156567 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 35156508 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 35156507 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagact 35156455 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgccc 185 ||||||||||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| | Sbjct: 35156354 acaagaagaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctc 35156295 Query: 186 gcgaggccattcagta 201 | || ||||||||||| Sbjct: 35156294 gtgacgccattcagta 35156279 Score = 46.1 bits (23), Expect = 0.084 Identities = 38/43 (88%) Strand = Plus / Minus Query: 208 ggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 35156140 ggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 35156098
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 111993 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 111934 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 111933 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagact 111881 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgccc 185 ||||||||||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| | Sbjct: 111780 acaagaagaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctc 111721 Query: 186 gcgaggccattcagta 201 | || ||||||||||| Sbjct: 111720 gtgacgccattcagta 111705 Score = 46.1 bits (23), Expect = 0.084 Identities = 38/43 (88%) Strand = Plus / Minus Query: 208 ggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 111566 ggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 111524
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 25820 ggatgacaagataatagcagtatgtgctgatgatcctgaataccgtcattacaatgacat 25761 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 25760 cagtgagctgtctcctcaccgcctccaagagattaaacgcttctttgaagact 25708 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgccc 185 ||||||||||||||||||||||||| ||||| ||||| ||||| ||||| | |||||| | Sbjct: 25607 acaagaagaatgagaacaaggaggttgctgttgatgcattcttgcctgccaacactgctc 25548 Query: 186 gcgaggccattcagta 201 | || ||||||||||| Sbjct: 25547 gtgacgccattcagta 25532 Score = 46.1 bits (23), Expect = 0.084 Identities = 38/43 (88%) Strand = Plus / Minus Query: 208 ggacctgtatgcgcagtatattctgcagagcttaaggcagtag 250 ||||||||||||||| ||||| |||| ||||| ||||||||| Sbjct: 25393 ggacctgtatgcgcaatatatcttgcaaagcttgaggcagtag 25351
>ref|XM_475313.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 135 bits (68), Expect = 1e-28 Identities = 188/228 (82%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||| ||||| |||||||| ||||||||||| ||||| || | ||| | | Sbjct: 438 ggatgacaagatcatagctgtctgcgccgatgatcctgagtaccgccatttcaataatct 497 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||| ||||| ||||| || ||||| || || ||| |||||||||||||||||||||||| Sbjct: 498 cagcgagctttctcctcatcgccttcaggaaatccggcgcttctttgaagactacaagaa 557 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||| |||||| ||| ||||| ||||| | || || || || || Sbjct: 558 gaatgagaacaaggaggttgctgtcaatgacttcttgcctgctccgacagctcgtgaagc 617 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagctt 240 || ||||| || ||||| ||||| || ||||| |||||||||||||| Sbjct: 618 aatccagtactctatggatctgtacgcacagtacattctgcagagctt 665
>dbj|AK059951.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B08, full insert sequence Length = 1031 Score = 135 bits (68), Expect = 1e-28 Identities = 188/228 (82%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||| ||||| |||||||| ||||||||||| ||||| || | ||| | | Sbjct: 527 ggatgacaagatcatagctgtctgcgccgatgatcctgagtaccgccatttcaataatct 586 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaa 132 ||| ||||| ||||| || ||||| || || ||| |||||||||||||||||||||||| Sbjct: 587 cagcgagctttctcctcatcgccttcaggaaatccggcgcttctttgaagactacaagaa 646 Query: 133 gaatgagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggc 192 |||||||||||||||||| |||||| ||| ||||| ||||| | || || || || || Sbjct: 647 gaatgagaacaaggaggttgctgtcaatgacttcttgcctgctccgacagctcgtgaagc 706 Query: 193 cattcagtattcgatggacctgtatgcgcagtatattctgcagagctt 240 || ||||| || ||||| ||||| || ||||| |||||||||||||| Sbjct: 707 aatccagtactctatggatctgtacgcacagtacattctgcagagctt 754
>ref|NM_183784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 Score = 129 bits (65), Expect = 7e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 30 cagtctgcgcggatgatcctgaataccgtcactacaacgacatcagtgagctgtctcccc 89 ||||||| || |||||||||||| || |||||||||| ||||||| |||| ||||||| | Sbjct: 32 cagtctgtgctgatgatcctgaacactgtcactacaatgacatcaatgagttgtctcctc 91 Query: 90 accgcctccaagagatcaagcgcttctttgaagactacaagaagaatgagaacaaggagg 149 || |||||||||||||| | ||||| |||||||||||||||||||||||||| ||| ||| Sbjct: 92 actgcctccaagagatccaacgcttatttgaagactacaagaagaatgagaaaaagaagg 151 Query: 150 t 150 | Sbjct: 152 t 152
>dbj|AK111757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060L20, full insert sequence Length = 1080 Score = 129 bits (65), Expect = 7e-27 Identities = 173/209 (82%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| ||||| ||||||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 488 gacaagatcatagccgtctgcgtggacgatcctgagtaccgccactacaacgatctcagt 547 Query: 77 gagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaagaat 136 ||||| || || || ||| |||| || ||| ||| |||||||||||||||||||||||| Sbjct: 548 gagctttcgcctcatcgcgtccaggaaatccggcgtttctttgaagactacaagaagaat 607 Query: 137 gagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggccatt 196 || |||||||||||||| || ||| | | | |||| |||| |||| || || ||||| Sbjct: 608 gaaaacaaggaggtcgccgtgaatgaggtactgcctgtgaccgctgctcgggatgccatc 667 Query: 197 cagtattcgatggacctgtatgcgcagta 225 |||||||| ||||| |||||||| ||||| Sbjct: 668 cagtattccatggatctgtatgctcagta 696
>ref|NM_190753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 121 bits (61), Expect = 2e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| ||||| ||||||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 409 gacaagatcatagccgtctgcgtggacgatcctgagtaccgccactacaacgatctcagt 468 Query: 77 gagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaagaat 136 ||||| || || || ||| |||| || ||| ||| |||||||||||||||||||||||| Sbjct: 469 gagctttcgcctcatcgcgtccaggaaatccggcgtttctttgaagactacaagaagaat 528 Query: 137 gagaacaaggaggtcgc 153 || |||||||||||||| Sbjct: 529 gaaaacaaggaggtcgc 545
>gb|AY107328.1| Zea mays PCO076731 mRNA sequence Length = 1119 Score = 119 bits (60), Expect = 7e-24 Identities = 165/200 (82%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| || || |||||||| || || || || ||||| ||||||||||||||||| Sbjct: 582 gacaagatcatcgccgtctgcgccgacgaccccgagtaccgccactacaacgacatcagc 641 Query: 77 gagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaagaat 136 ||||| || || ||||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 642 gagctctcccctcaccgcctccaggagatccgccgcttcttcgaagactacaagaagaac 701 Query: 137 gagaacaaggaggtcgctgtcgatgcgttcttacctgcgaccactgcccgcgaggccatt 196 |||||||||||||| || ||| | | ||| | || || || |||||||||| ||||| Sbjct: 702 gagaacaaggaggtggccgtcaacgacttcctgcccgccgccgctgcccgcgaagccatc 761 Query: 197 cagtattcgatggacctgta 216 ||||| || ||||||||||| Sbjct: 762 cagtactccatggacctgta 781
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || ||||||||||||||| | |||||||| ||||| Sbjct: 118792 ggatgacaagataatagcagtttgtgctgatgatcctgaatactgccactacaatgacat 118851 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | ||||| ||||||| ||| ||||||||||| || | ||||||||||||||| Sbjct: 118852 cggtgagttgtctcctcactgcctccaagagttctaatgcttctttgaagact 118904
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || ||||||||||||||| | |||||||| ||||| Sbjct: 14441 ggatgacaagataatagcagtttgtgctgatgatcctgaatactgccactacaatgacat 14500 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | ||||| ||||||| ||| ||||||||||| || | ||||||||||||||| Sbjct: 14501 cggtgagttgtctcctcactgcctccaagagttctaatgcttctttgaagact 14553
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || ||||||||||||||| | |||||||| ||||| Sbjct: 4635599 ggatgacaagataatagcagtttgtgctgatgatcctgaatactgccactacaatgacat 4635540 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | ||||| ||||||| ||| ||||||||||| || | ||||||||||||||| Sbjct: 4635539 cggtgagttgtctcctcactgcctccaagagttctaatgcttctttgaagact 4635487
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || ||||||||||||||| | |||||||| ||||| Sbjct: 11793152 ggatgacaagataatagcagtttgtgctgatgatcctgaatactgccactacaatgacat 11793211 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | ||||| ||||||| ||| ||||||||||| || | ||||||||||||||| Sbjct: 11793212 cggtgagttgtctcctcactgcctccaagagttctaatgcttctttgaagact 11793264 Score = 65.9 bits (33), Expect = 9e-08 Identities = 93/113 (82%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||| ||||| |||||||| ||||||||||| ||||| || | ||| | | Sbjct: 21348670 ggatgacaagatcatagctgtctgcgccgatgatcctgagtaccgccatttcaataatct 21348729 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||| ||||| ||||| || ||||| || || ||| ||||||||||||||||| Sbjct: 21348730 cagcgagctttctcctcatcgccttcaggaaatccggcgcttctttgaagact 21348782 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 126 acaagaagaatgagaacaaggaggtcgctgtcgatgcgttcttacctgc 174 ||||||||||||||||||||||||| |||||| ||| ||||| ||||| Sbjct: 21348880 acaagaagaatgagaacaaggaggttgctgtcaatgacttcttgcctgc 21348928 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtc 157 ||||||||||||||||||||||||| |||||| Sbjct: 708805 acaagaagaatgagaacaaggaggttgctgtc 708774
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || ||||||||||||||| | |||||||| ||||| Sbjct: 4635580 ggatgacaagataatagcagtttgtgctgatgatcctgaatactgccactacaatgacat 4635521 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | ||||| ||||||| ||| ||||||||||| || | ||||||||||||||| Sbjct: 4635520 cggtgagttgtctcctcactgcctccaagagttctaatgcttctttgaagact 4635468
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 ||||||||||||||||||||| || || ||||||||||||||| | |||||||| ||||| Sbjct: 116528 ggatgacaagataatagcagtttgtgctgatgatcctgaatactgccactacaatgacat 116587 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | ||||| ||||||| ||| ||||||||||| || | ||||||||||||||| Sbjct: 116588 cggtgagttgtctcctcactgcctccaagagttctaatgcttctttgaagact 116640
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 30 cagtctgcgcggatgatcctgaataccgtcactacaacgacatcagtgagctgtctcccc 89 ||||||| || |||||||||||| || |||||||||| ||||||| |||| ||||||| | Sbjct: 12275243 cagtctgtgctgatgatcctgaacactgtcactacaatgacatcaatgagttgtctcctc 12275184 Query: 90 accgcctccaagagatcaagcgcttctttgaagact 125 || |||||||||||||| | ||||| |||||||||| Sbjct: 12275183 actgcctccaagagatccaacgcttatttgaagact 12275148 Score = 73.8 bits (37), Expect = 4e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| ||||| ||||||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 37516302 gacaagatcatagccgtctgcgtggacgatcctgagtaccgccactacaacgatctcagt 37516243 Query: 77 gagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||| || || || ||| |||| || ||| ||| ||||||||||||| Sbjct: 37516242 gagctttcgcctcatcgcgtccaggaaatccggcgtttctttgaagact 37516194 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtc 157 |||||||||||||||| |||||||| |||||| Sbjct: 43065514 acaagaagaatgagaataaggaggtggctgtc 43065483 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgc 153 ||||||||||||| |||||||||||||| Sbjct: 37516107 acaagaagaatgaaaacaaggaggtcgc 37516080
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 30 cagtctgcgcggatgatcctgaataccgtcactacaacgacatcagtgagctgtctcccc 89 ||||||| || |||||||||||| || |||||||||| ||||||| |||| ||||||| | Sbjct: 99869 cagtctgtgctgatgatcctgaacactgtcactacaatgacatcaatgagttgtctcctc 99810 Query: 90 accgcctccaagagatcaagcgcttctttgaagact 125 || |||||||||||||| | ||||| |||||||||| Sbjct: 99809 actgcctccaagagatccaacgcttatttgaagact 99774
>ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 510 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 569 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaag 133 | || | | || |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 570 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagactacaagaag 629 Query: 134 aatgagaacaaggaggtcgctgtc 157 ||||||||||| || || |||||| Sbjct: 630 aatgagaacaaagaagttgctgtc 653
>ref|XM_507522.1| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.39 mRNA Length = 1076 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 543 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 602 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaag 133 | || | | || |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 603 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagactacaagaag 662 Query: 134 aatgagaacaaggaggtcgctgtc 157 ||||||||||| || || |||||| Sbjct: 663 aatgagaacaaagaagttgctgtc 686
>ref|XM_506930.2| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.39 mRNA Length = 1090 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 518 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 577 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaag 133 | || | | || |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 578 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagactacaagaag 637 Query: 134 aatgagaacaaggaggtcgctgtc 157 ||||||||||| || || |||||| Sbjct: 638 aatgagaacaaagaagttgctgtc 661
>dbj|AK103984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G06, full insert sequence Length = 1017 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 510 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 569 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaag 133 | || | | || |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 570 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagactacaagaag 629 Query: 134 aatgagaacaaggaggtcgctgtc 157 ||||||||||| || || |||||| Sbjct: 630 aatgagaacaaagaagttgctgtc 653
>dbj|AK070562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F08, full insert sequence Length = 1090 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 518 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 577 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaag 133 | || | | || |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 578 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagactacaagaag 637 Query: 134 aatgagaacaaggaggtcgctgtc 157 ||||||||||| || || |||||| Sbjct: 638 aatgagaacaaagaagttgctgtc 661
>dbj|AK061019.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-C08, full insert sequence Length = 1076 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 543 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 602 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagactacaagaag 133 | || | | || |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 603 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagactacaagaag 662 Query: 134 aatgagaacaaggaggtcgctgtc 157 ||||||||||| || || |||||| Sbjct: 663 aatgagaacaaagaagttgctgtc 686
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 41 gatgatcctgaataccgtcactacaacgacatcagtgagctgtctccccaccgcctccaa 100 ||||||||||||||| ||||||||| ||||||| |||| |||||| ||| ||||||| Sbjct: 11058427 gatgatcctgaatactatcactacaatgacatcattgagacgtctcctcactgcctccac 11058368 Query: 101 gagatcaagcgcttctttgaagact 125 |||||||| ||||||||||||||| Sbjct: 11058367 gagatcaaatgcttctttgaagact 11058343
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 41 gatgatcctgaataccgtcactacaacgacatcagtgagctgtctccccaccgcctccaa 100 ||||||||||||||| ||||||||| ||||||| |||| |||||| ||| ||||||| Sbjct: 74695 gatgatcctgaatactatcactacaatgacatcattgagacgtctcctcactgcctccac 74754 Query: 101 gagatcaagcgcttctttgaagact 125 |||||||| ||||||||||||||| Sbjct: 74755 gagatcaaatgcttctttgaagact 74779
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 41 gatgatcctgaataccgtcactacaacgacatcagtgagctgtctccccaccgcctccaa 100 ||||||||||||||| ||||||||| ||||||| |||| |||||| ||| ||||||| Sbjct: 11055190 gatgatcctgaatactatcactacaatgacatcattgagacgtctcctcactgcctccac 11055131 Query: 101 gagatcaagcgcttctttgaagact 125 |||||||| ||||||||||||||| Sbjct: 11055130 gagatcaaatgcttctttgaagact 11055106
>gb|AF093629.1|AF093629 Oryza sativa inorganic pyrophosphatase (IPP) mRNA, complete cds Length = 1025 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 89 caccgcctccaagagatcaagcgcttctttgaagactacaagaagaatgagaacaaggag 148 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 557 caccgccttcaagagatccgccgcttctttgaagactacaagaagaatgagaacaaagaa 616 Query: 149 gtcgctgtc 157 || |||||| Sbjct: 617 gttgctgtc 625
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 41 gatgatcctgaataccgtcactacaacgacatcagtgagctgtctccccaccgcctccaa 100 ||||||||||||||| ||||||||| ||||||| |||| |||||| ||| ||||||| Sbjct: 101912 gatgatcctgaatactatcactacaatgacatcattgagacgtctcctcactgcctccac 101853 Query: 101 gagatcaagcgcttctttgaagact 125 |||||||| ||||||||||||||| Sbjct: 101852 gagatcaaatgcttctttgaagact 101828
>ref|XM_475082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 104 atcaagcgcttctttgaagactacaagaagaatgagaacaaggaggtcgctgtc 157 |||| |||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 505 atcaggcgcttttttgaggactacaagaagaatgagaacaaggaggttgctgtc 558
>dbj|AK069313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014E07, full insert sequence Length = 1163 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 104 atcaagcgcttctttgaagactacaagaagaatgagaacaaggaggtcgctgtc 157 |||| |||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 746 atcaggcgcttttttgaggactacaagaagaatgagaacaaggaggttgctgtc 799
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 73.8 bits (37), Expect = 4e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| ||||| ||||||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 110839 gacaagatcatagccgtctgcgtggacgatcctgagtaccgccactacaacgatctcagt 110780 Query: 77 gagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||| || || || ||| |||| || ||| ||| ||||||||||||| Sbjct: 110779 gagctttcgcctcatcgcgtccaggaaatccggcgtttctttgaagact 110731 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgc 153 ||||||||||||| |||||||||||||| Sbjct: 110644 acaagaagaatgaaaacaaggaggtcgc 110617
>gb|AY104537.1| Zea mays PCO143243 mRNA sequence Length = 1221 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 104 atcaagcgcttctttgaagactacaagaagaatgagaacaaggaggtcgctgt 156 |||| ||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 699 atcaggcgcttcttcgaggactacaagaagaatgagaacaaggaggttgctgt 751
>ref|NM_196419.1| Oryza sativa (japonica cultivar-group) putative soluble inorganic pyrophosphatase (OSJNBa0060A14.9), mRNA Length = 588 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaaggaggtcgc 153 ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 448 cgcttctttgaagactacaagaagaatgaaaacaaagaggtcgc 491
>gb|DQ175969.1| Hordeum vulgare subsp. vulgare clone 40-28A-RB flanking T-DNA insertion sequence Length = 703 Score = 71.9 bits (36), Expect = 1e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| ||||| || ||||||||||| |||||||||| || |||||| Sbjct: 353 gatgacaagatcatagctgtctgtgctgatgatcctgagtaccgtcacttcagagacatc 294 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||||| || | || || ||||| || |||||| |||||||||||||||| Sbjct: 293 agtgaacttcccccgcatcgcctacaggagatccgtcgcttctttgaagact 242
>dbj|AK072672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138M09, full insert sequence Length = 1161 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaaggaggtcgc 153 ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 536 cgcttctttgaagactacaagaagaatgaaaacaaagaggtcgc 579
>ref|NM_116378.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT4G01480 mRNA, complete cds Length = 1014 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||||||||||||||||||||||||||||||||| Sbjct: 599 ttctttgaagactacaagaagaatgagaacaagga 633
>emb|AJ225172.1|STMDSIP Solanum tuberosum mRNA for magnesium dependent soluble inorganic pyrophosphatase Length = 1102 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaaggaggtcgctgt 156 ||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 733 cgcttctttgaggactacaagaaaaatgagaacaaggaggttgctgt 779
>gb|AY081667.1| Arabidopsis thaliana similar to inorganic pyrophosphatase (At4g01480) mRNA, complete cds Length = 815 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||||||||||||||||||||||||||||||||| Sbjct: 514 ttctttgaagactacaagaagaatgagaacaagga 548
>gb|AY054516.1| Arabidopsis thaliana similar to inorganic pyrophosphatase (At4g01480; F11O4.12) mRNA, complete cds Length = 1009 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||||||||||||||||||||||||||||||||| Sbjct: 599 ttctttgaagactacaagaagaatgagaacaagga 633
>emb|BX828444.1|CNS0A2Y5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||||||||||||||||||||||||||||||||| Sbjct: 587 ttctttgaagactacaagaagaatgagaacaagga 621
>gb|AF315738.1|AF315738 Arabidopsis thaliana PRLI-interacting factor F mRNA, partial cds Length = 802 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||||||||||||||||||||||||||||||||| Sbjct: 364 ttctttgaagactacaagaagaatgagaacaagga 398
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 65.9 bits (33), Expect = 9e-08 Identities = 93/113 (82%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacat 72 |||||||||||| ||||| |||||||| ||||||||||| ||||| || | ||| | | Sbjct: 65992 ggatgacaagatcatagctgtctgcgccgatgatcctgagtaccgccatttcaataatct 66051 Query: 73 cagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 ||| ||||| ||||| || ||||| || || ||| ||||||||||||||||| Sbjct: 66052 cagcgagctttctcctcatcgccttcaggaaatccggcgcttctttgaagact 66104 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 126 acaagaagaatgagaacaaggaggtcgctgtcgatgcgttcttacctgc 174 ||||||||||||||||||||||||| |||||| ||| ||||| ||||| Sbjct: 66202 acaagaagaatgagaacaaggaggttgctgtcaatgacttcttgcctgc 66250
>emb|AJ298232.1|CRE298232 Chlamydomonas reinhardtii mRNA for soluble inorganic pyrophosphatase (ppaII gene) Length = 834 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 67 cgacatcagtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagacta 126 ||||||||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 510 cgacatcagccagctgcctcctcaccgcctggccgagatcaagcggttcttcgaggacta 569 Query: 127 caagaagaatgagaacaaggaggt 150 ||||||||| ||| |||||||||| Sbjct: 570 caagaagaacgagcacaaggaggt 593
>gb|AY635929.1| Arachis hypogaea putative inorganic pyrophosphatase mRNA, complete cds Length = 767 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaagga 147 ||||| || ||||||||||||||||||||||||||||| Sbjct: 541 cgctttttcgaagactacaagaagaatgagaacaagga 578
>gb|AY574053.1| Populus tomentosa soluble inorganic pyrophosphatase mRNA, complete cds Length = 915 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaaggaggt 150 |||||||||||||||||||| || |||||||||||||| Sbjct: 555 ttctttgaagactacaagaaaaacgagaacaaggaggt 592
>emb|AJ717307.1| Arachis hypogaea mRNA for putative inorganic pyrophosphatase (pah767 gene) Length = 767 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaagga 147 ||||| || ||||||||||||||||||||||||||||| Sbjct: 541 cgctttttcgaagactacaagaagaatgagaacaagga 578
>gb|AF149116.1|AF149116 Populus tremula x Populus tremuloides soluble inorganic pyrophosphatase (ip1) mRNA, complete cds Length = 950 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaaggaggt 150 |||||||||||||||||||| || |||||||||||||| Sbjct: 556 ttctttgaagactacaagaaaaacgagaacaaggaggt 593
>emb|AM162551.1| Papaver rhoeas mRNA for soluble inorganic pyrophosphatase (p26b gene) Length = 959 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaagga 147 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 664 cgcttctttgaagactacaagaaaaatgaaaacaagga 701 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaata 54 |||||||| || |||||||| || ||||| ||||||||||| Sbjct: 568 gatgacaaaatcatagcagtgtgtgcggacgatcctgaata 608
>gb|AF022733.1|AF022733 Oryza sativa inorganic pyrophosphatase (Ipp) mRNA, complete cds Length = 1122 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 116 tttgaagactacaagaagaatgagaacaaggaggtcgctgtc 157 ||||||||||||||||||||||||||||| || || |||||| Sbjct: 609 tttgaagactacaagaagaatgagaacaaagaagttgctgtc 650
>emb|AM162550.1| Papaver rhoeas mRNA for soluble inorganic pyrophosphatase (p26a gene) Length = 842 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaaggaggtcgctgtc 157 ||||||||||| |||||||||||||| ||||| ||||| |||||| Sbjct: 538 ttctttgaagattacaagaagaatgaaaacaaagaggttgctgtc 582 Score = 50.1 bits (25), Expect = 0.005 Identities = 46/53 (86%) Strand = Plus / Plus Query: 13 ggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactaca 65 |||||| ||||| || ||||| || ||||||||||| ||||||||||| |||| Sbjct: 438 ggatgataagatcattgcagtttgtgcggatgatccagaataccgtcattaca 490
>ref|NM_127380.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT2G18230 mRNA, complete cds Length = 1000 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 648 cgcttctttgaggactacaagaagaacgagaacaag 683
>emb|X57545.1|ATINPYPP A.thaliana mRNA for inorganic pyrophosphatase Length = 976 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 629 cgcttctttgaggactacaagaagaacgagaacaag 664
>gb|AY091698.1| Arabidopsis thaliana At2g18230/T30D6.26 mRNA, complete cds Length = 657 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 517 cgcttctttgaggactacaagaagaacgagaacaag 552
>gb|AY048209.1| Arabidopsis thaliana At2g18230/T30D6.26 mRNA, complete cds Length = 932 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 583 cgcttctttgaggactacaagaagaacgagaacaag 618
>emb|BX819079.1|CNS0A9VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 924 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 631 cgcttctttgaggactacaagaagaacgagaacaag 666
>emb|BX819078.1|CNS0A9VU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 908 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 633 cgcttctttgaggactacaagaagaacgagaacaag 668
>emb|BX819498.1|CNS0A9SC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 624 cgcttctttgaggactacaagaagaacgagaacaag 659
>emb|BX821249.1|CNS0A9BA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 633 cgcttctttgaggactacaagaagaacgagaacaag 668
>gb|AY088579.1| Arabidopsis thaliana clone 8068 mRNA, complete sequence Length = 978 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaag 145 ||||||||||| |||||||||||||| ||||||||| Sbjct: 649 cgcttctttgaggactacaagaagaacgagaacaag 684
>gb|AF220202.1|AF220202 Malus domestica soluble inorganic pyrophosphatase mRNA, complete cds Length = 1053 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Plus Query: 41 gatgatcctgaataccgtcactacaacgacatcagtgagctgtctccccaccgcctccaa 100 ||||||||||| ||||| |||||||| ||||||| ||||| | || ||||| | Sbjct: 622 gatgatcctgagtaccgacactacaatgacatcaaggagctcccacctcaccgtttggct 681 Query: 101 gagatcaagcgcttctttgaagactacaagaagaatgagaacaa 144 |||||| |||||||||||| ||||||||||| ||||||||||| Sbjct: 682 gagatccggcgcttctttgaggactacaagaaaaatgagaacaa 725
>gb|AY109015.1| Zea mays PCO123317 mRNA sequence Length = 1277 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||| ||||| ||||| ||||| || ||||| ||||||| |||||||||||| |||||| Sbjct: 686 gatgataagatcatagctgtctgtgctgatgaccctgaattccgtcactacaaggacatc 745
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtc 157 ||||||||||||||||||||||||| |||||| Sbjct: 54004 acaagaagaatgagaacaaggaggttgctgtc 53973
>emb|Z36894.1|STPPAG S.tuberosum (Desiree) ppa mRNA for soluble inorganic pyrophosphatase Length = 948 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 110 cgcttctttgaagactacaagaagaatgagaacaa 144 ||||| ||||||||||||||||||||||| ||||| Sbjct: 574 cgcttttttgaagactacaagaagaatgaaaacaa 608 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactaca 65 ||||||||||| |||||||| || || |||||||| ||||| || ||||||| Sbjct: 478 gatgacaagatcatagcagtgtgtgctgatgatccagaatatcgccactaca 529
>emb|AJ344157.1|BVU344157 Beta vulgaris mRNA for soluble pyrophosphatase (ppa1 gene) Length = 1041 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 101 gagatcaagcgcttctttgaagactacaagaagaatgagaacaaggaggt 150 ||||||| ||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 638 gagatcagacgcttttttgaggactacaagaaaaatgagaacaaagaggt 687
>ref|NM_115222.1| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT3G53620 mRNA, complete cds Length = 1294 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| || || |||||||| || ||||| || || || || ||||||||||||||| Sbjct: 699 gacaagatcattgctgtctgcgctgacgatccagagtatcgccattacaacgacatcagt 758 Query: 77 gagct 81 ||||| Sbjct: 759 gagct 763 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 |||||||||||||| ||||| || ||||||||||| Sbjct: 795 ttctttgaagactataagaaaaacgagaacaagga 829
>emb|BX825169.1|CNS0A57B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| || || |||||||| || ||||| || || || || ||||||||||||||| Sbjct: 505 gacaagatcattgctgtctgcgctgacgatccagagtatcgccattacaacgacatcagt 564 Query: 77 gagct 81 ||||| Sbjct: 565 gagct 569
>gb|AY087991.1| Arabidopsis thaliana clone 40186 mRNA, complete sequence Length = 1297 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| || || |||||||| || ||||| || || || || ||||||||||||||| Sbjct: 701 gacaagatcattgctgtctgcgctgacgatccagagtatcgccattacaacgacatcagt 760 Query: 77 gagct 81 ||||| Sbjct: 761 gagct 765 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 |||||||||||||| ||||| || ||||||||||| Sbjct: 797 ttctttgaagactataagaaaaacgagaacaagga 831
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| || || |||||||| || ||||| || || || || ||||||||||||||| Sbjct: 123542 gacaagatcattgctgtctgcgctgacgatccagagtatcgccattacaacgacatcagt 123601 Query: 77 gagct 81 ||||| Sbjct: 123602 gagct 123606
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.021 Identities = 90/112 (80%) Strand = Plus / Minus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 29101121 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 29101062 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | || | | || |||||||| ||||||||| |||||||||||||||| Sbjct: 29101061 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagact 29101010 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtc 157 ||||||||||||||||||| || || |||||| Sbjct: 29100902 acaagaagaatgagaacaaagaagttgctgtc 29100871
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtc 157 |||||||||||||||| |||||||| |||||| Sbjct: 62543 acaagaagaatgagaataaggaggtggctgtc 62512
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 48.1 bits (24), Expect = 0.021 Identities = 90/112 (80%) Strand = Plus / Minus Query: 14 gatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatc 73 ||||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||| Sbjct: 147286 gatgacaagatcatagctgtttgtgctgatgaccctgaataccgccacttcagggacatc 147227 Query: 74 agtgagctgtctccccaccgcctccaagagatcaagcgcttctttgaagact 125 | || | | || |||||||| ||||||||| |||||||||||||||| Sbjct: 147226 aaggaaatcccccctcaccgccttcaagagatccgccgcttctttgaagact 147175 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgctgtc 157 ||||||||||||||||||| || || |||||| Sbjct: 147067 acaagaagaatgagaacaaagaagttgctgtc 147036
>ref|NM_099987.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT1G01050 mRNA, complete cds Length = 960 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 622 ttcttcgaagactacaagaaaaacgagaacaagga 656
>ref|XM_960548.1| Neurospora crassa OR74A hypothetical protein (NCU02510.1) partial mRNA Length = 5037 Score = 46.1 bits (23), Expect = 0.084 Identities = 38/43 (88%) Strand = Plus / Plus Query: 115 ctttgaagactacaagaagaatgagaacaaggaggtcgctgtc 157 |||||| | ||||||||||| ||| |||||||||| ||||||| Sbjct: 3228 ctttgaggtctacaagaagattgacaacaaggaggccgctgtc 3270
>ref|XM_331708.1| Neurospora crassa OR74A hypothetical protein (NCU02510.1) partial mRNA Length = 5037 Score = 46.1 bits (23), Expect = 0.084 Identities = 38/43 (88%) Strand = Plus / Plus Query: 115 ctttgaagactacaagaagaatgagaacaaggaggtcgctgtc 157 |||||| | ||||||||||| ||| |||||||||| ||||||| Sbjct: 3228 ctttgaggtctacaagaagattgacaacaaggaggccgctgtc 3270
>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence Length = 120323 Score = 46.1 bits (23), Expect = 0.084 Identities = 53/63 (84%) Strand = Plus / Minus Query: 12 gggatgacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgaca 71 ||||||||||||| |||||||| || || ||||| ||||||| ||| || |||| |||| Sbjct: 83173 gggatgacaagatcatagcagtttgtgctgatgaccctgaattccgccattacacagaca 83114 Query: 72 tca 74 ||| Sbjct: 83113 tca 83111
>gb|AY081555.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At1g01050) mRNA, complete cds Length = 805 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 502 ttcttcgaagactacaagaaaaacgagaacaagga 536
>gb|AY065201.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At1g01050; T25K16.5) mRNA, complete cds Length = 904 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 592 ttcttcgaagactacaagaaaaacgagaacaagga 626
>gb|AY057668.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 917 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 591 ttcttcgaagactacaagaaaaacgagaacaagga 625
>gb|AY052717.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 921 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 588 ttcttcgaagactacaagaaaaacgagaacaagga 622
>emb|BX825830.1|CNS0A4YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 993 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 |||||||||||||| ||||| || ||||||||||| Sbjct: 661 ttctttgaagactataagaaaaacgagaacaagga 695 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 17 gacaagataatagcagtctgcgcggatgatcctgaataccgtcactacaacgacatcagt 76 |||||||| || || || ||||| || ||||| || || || || ||||||||||||||| Sbjct: 565 gacaagatcattgctgtttgcgctgacgatccagagtatcgccattacaacgacatcagt 624 Query: 77 gagct 81 ||||| Sbjct: 625 gagct 629
>emb|BX825677.1|CNS0A52G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL55ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1003 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 |||||||||||||| ||||| || ||||||||||| Sbjct: 642 ttctttgaagactataagaaaaacgagaacaagga 676
>gb|AY085015.1| Arabidopsis thaliana clone 124537 mRNA, complete sequence Length = 953 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 622 ttcttcgaagactacaagaaaaacgagaacaagga 656
>gb|BT001144.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 639 Score = 46.1 bits (23), Expect = 0.084 Identities = 32/35 (91%) Strand = Plus / Plus Query: 113 ttctttgaagactacaagaagaatgagaacaagga 147 ||||| |||||||||||||| || ||||||||||| Sbjct: 502 ttcttcgaagactacaagaaaaacgagaacaagga 536
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 acaagaagaatgagaacaagga 147 |||||||||||||||||||||| Sbjct: 50118 acaagaagaatgagaacaagga 50139
>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 Length = 72872 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaagga 147 |||||||||||||||||||||| Sbjct: 53459 acaagaagaatgagaacaagga 53438
>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence Length = 213826 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 agaagaatgagaacaaggagg 149 ||||||||||||||||||||| Sbjct: 151066 agaagaatgagaacaaggagg 151086
>gb|AC009286.32| Homo sapiens chromosome 22 clone 322f3 map 22, complete sequence Length = 121871 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gactatgtgtgttataaataa 328 ||||||||||||||||||||| Sbjct: 26019 gactatgtgtgttataaataa 25999
>gb|AC158320.1| Homo sapiens chromosome 22 clone WI2-913E19, complete sequence Length = 38653 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gactatgtgtgttataaataa 328 ||||||||||||||||||||| Sbjct: 23117 gactatgtgtgttataaataa 23097
>gb|AC165299.13| Mus musculus chromosome 15, clone RP23-266F2, complete sequence Length = 186266 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 actatgtgtgttataaataa 328 |||||||||||||||||||| Sbjct: 85253 actatgtgtgttataaataa 85272
>gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome 18, complete sequence Length = 181022 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 338 aatgtgtactcacactatttatgaagat 365 |||||||||||||||||| |||| |||| Sbjct: 162204 aatgtgtactcacactatctatgcagat 162231
>gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome 18, complete sequence Length = 239075 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 338 aatgtgtactcacactatttatgaagat 365 |||||||||||||||||| |||| |||| Sbjct: 18695 aatgtgtactcacactatctatgcagat 18722
>ref|XM_656974.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4462.2), mRNA Length = 3591 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tctttgaagactacaagaag 133 |||||||||||||||||||| Sbjct: 3092 tctttgaagactacaagaag 3111
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acaagaagaatgagaacaag 145 |||||||||||||||||||| Sbjct: 138001 acaagaagaatgagaacaag 138020
>gb|AC126547.4| Mus musculus BAC clone RP24-180F1 from chromosome 13, complete sequence Length = 181823 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 atcagtgagctgtctcccca 90 |||||||||||||||||||| Sbjct: 108072 atcagtgagctgtctcccca 108091
>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence Length = 215910 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acaagaagaatgagaacaag 145 |||||||||||||||||||| Sbjct: 176490 acaagaagaatgagaacaag 176509
>gb|AC122909.2| Mus musculus BAC clone RP23-53K17 from 10, complete sequence Length = 198537 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acaagaagaatgagaacaag 145 |||||||||||||||||||| Sbjct: 124477 acaagaagaatgagaacaag 124496
>emb|AL512290.11| Human DNA sequence from clone RP13-143G15 on chromosome 6 Contains a cytochrome c oxidase subunit Vb (COX5B) pseudogene, a novel gene and part of a novel gene, complete sequence Length = 133918 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 caacaatgtgtactcacact 353 |||||||||||||||||||| Sbjct: 123063 caacaatgtgtactcacact 123044
>emb|BX323016.9| Zebrafish DNA sequence from clone CH211-273L18 in linkage group 6, complete sequence Length = 45653 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tttatgaagattaagtgatg 374 |||||||||||||||||||| Sbjct: 30812 tttatgaagattaagtgatg 30793
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgc 153 ||||||||||||| ||||| |||||||| Sbjct: 44994 acaagaagaatgaaaacaaagaggtcgc 44967
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgc 153 ||||||||||||| ||||| |||||||| Sbjct: 13352617 acaagaagaatgaaaacaaagaggtcgc 13352590
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaaggaggtcgc 153 ||||||||||||| ||||| |||||||| Sbjct: 13359957 acaagaagaatgaaaacaaagaggtcgc 13359930
>gb|AC134337.3| Mus musculus BAC clone RP23-252I24 from 8, complete sequence Length = 169201 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaag 145 |||||||||||||||||||| Sbjct: 132826 acaagaagaatgagaacaag 132807
>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence Length = 205357 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acaagaagaatgagaacaag 145 |||||||||||||||||||| Sbjct: 186946 acaagaagaatgagaacaag 186927
>emb|AL669911.16| Mouse DNA sequence from clone RP23-65G8 on chromosome 11, complete sequence Length = 205030 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ctatgtgtgttataaataaa 329 |||||||||||||||||||| Sbjct: 63838 ctatgtgtgttataaataaa 63857 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,171,789 Number of Sequences: 3902068 Number of extensions: 3171789 Number of successful extensions: 60936 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60479 Number of HSP's gapped (non-prelim): 447 length of query: 388 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 366 effective length of database: 17,147,199,772 effective search space: 6275875116552 effective search space used: 6275875116552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
