ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdf10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme... 54 2e-07
2DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme... 48 2e-05
3DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme... 47 3e-05
4DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme... 47 5e-05
5DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme... 45 1e-04
6DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme... 44 4e-04
7DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme... 44 4e-04
8DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme... 42 0.001
9DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme... 41 0.002
10DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzym... 41 0.002
11DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme... 41 0.002
12DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme... 40 0.004
13DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme... 40 0.004
14DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzym... 39 0.009
15DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzym... 39 0.009
16DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzym... 38 0.016
17DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzym... 37 0.036
18DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzym... 37 0.036
19DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme... 37 0.036
20DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (... 37 0.036
21DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme... 35 0.18
22DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzym... 32 0.88
23MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C 32 1.1
24PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific pl... 32 1.5
25NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA p... 32 1.5
26ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase... 30 4.4
27RS10_CHLPN (Q9Z803) 30S ribosomal protein S10 30 4.4
28FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein 29 7.5
29REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonse... 29 7.5
30SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2 29 9.7
31RS10_CHLTR (P0A4A1) 30S ribosomal protein S10 29 9.7
32RS10_CHLMU (P0A4A2) 30S ribosomal protein S10 29 9.7
33ATG9_YEAST (Q12142) Autophagy-related protein 9 (Cytoplasm to va... 29 9.7
34MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa)... 29 9.7
35KHSE_ZYMMO (O69015) Homoserine kinase (EC 2.7.1.39) (HSK) (HK) 29 9.7

>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 393

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           MAAP SAIGFEGYEKRLEITF+EASIFA
Sbjct: 1   MAAPVSAIGFEGYEKRLEITFSEASIFA 28



to top

>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 400

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 450 TATMAAPTSAIGFEGYEKRLEITFNEASIF 539
           +A  A+P SAIGFEGYEKRLEITF+EA +F
Sbjct: 5   SAADASPVSAIGFEGYEKRLEITFSEAPVF 34



to top

>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 398

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 PTSAIGFEGYEKRLEITFNEASIFA 542
           P SAIGFEGYEKRLEITF+EA +FA
Sbjct: 11  PVSAIGFEGYEKRLEITFSEAPVFA 35



to top

>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 357

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           MA P SAIGFEGYEKRLEI+F E+S FA
Sbjct: 1   MALPASAIGFEGYEKRLEISFFESSFFA 28



to top

>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           MA  TSAIGFEGYEKRLEI+F EA IF+
Sbjct: 1   MALSTSAIGFEGYEKRLEISFFEAGIFS 28



to top

>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           MA P SAIGFEG+EKRLEI+F E  +FA
Sbjct: 3   MALPVSAIGFEGFEKRLEISFFEPGLFA 30



to top

>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           MA  TSAIGFEGYE RLEI+F EA IF+
Sbjct: 1   MALSTSAIGFEGYENRLEISFFEAGIFS 28



to top

>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 462 AAPTSAIGFEGYEKRLEITFNEASIFA 542
           A P SAIGFEG+EKRLEI+F E  +FA
Sbjct: 4   ALPVSAIGFEGFEKRLEISFFEPGLFA 30



to top

>DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13)
           [Contains: S-adenosylmethionine decarboxylase alpha
           chain; S-adenosylmethionine decarboxylase beta chain]
          Length = 360

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           M  P SAIGFEG+EKRLEI+F E  +FA
Sbjct: 3   MDLPVSAIGFEGFEKRLEISFVEPGLFA 30



to top

>DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 366

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEGYEKRLE+TF E SIF
Sbjct: 4   SAIGFEGYEKRLEVTFFEPSIF 25



to top

>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           M++  SAIGFEG+EKRLEI+F E S FA
Sbjct: 1   MSSEVSAIGFEGFEKRLEISFFEPSFFA 28



to top

>DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 363

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEG+EKRLEITF E SIF
Sbjct: 4   SAIGFEGFEKRLEITFFEPSIF 25



to top

>DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 459 MAAPTSAIGFEGYEKRLEITFNEASIFA 542
           M  P SAIGFEG+EKRLEI+F E  +F+
Sbjct: 3   MDLPVSAIGFEGFEKRLEISFVEPGLFS 30



to top

>DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 369

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEGYEKRLE++F E S+F
Sbjct: 4   SAIGFEGYEKRLEVSFFEPSLF 25



to top

>DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 362

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEGYEKRLE+TF E  +F
Sbjct: 4   SAIGFEGYEKRLEVTFFEPGLF 25



to top

>DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzyme 3 (EC|
           4.1.1.50) (AdoMetDC 3) (SamDC 3) [Contains:
           S-adenosylmethionine decarboxylase 3 alpha chain;
           S-adenosylmethionine decarboxylase 3 beta chain]
          Length = 367

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEGYEKRLE++F E S F
Sbjct: 4   SAIGFEGYEKRLEVSFFEPSFF 25



to top

>DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 377

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEG+EKRLEI+F E  IF
Sbjct: 19  SAIGFEGFEKRLEISFFEPGIF 40



to top

>DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 381

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEG+EKRLEI+F E  IF
Sbjct: 28  SAIGFEGFEKRLEISFFEPGIF 49



to top

>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 353

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIFA 542
           SAIGFEG+EKRLEI+F++  +F+
Sbjct: 4   SAIGFEGFEKRLEISFSDPGLFS 26



to top

>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 353

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIFA 542
           SAIGFEG+EKRLEI+F++  +F+
Sbjct: 4   SAIGFEGFEKRLEISFSDPGLFS 26



to top

>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +3

Query: 471 TSAIGFEGYEKRLEITF 521
           TSAIGFEG+EKRLEI+F
Sbjct: 2   TSAIGFEGFEKRLEISF 18



to top

>DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 368

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +3

Query: 474 SAIGFEGYEKRLEITFNEASIF 539
           SAIGFEG  +RLE++F E S+F
Sbjct: 4   SAIGFEGLRERLEVSFFEPSLF 25



to top

>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C|
          Length = 162

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 156 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 269
           AK+ A ++P C +LP      TFD  E ++S+ L+IQT
Sbjct: 66  AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103



to top

>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)|
          Length = 629

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -3

Query: 401 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 222
           NWS + K     +GG  +   NC   +  GK KAK  +   + + LN ++ ++L L LV 
Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497

Query: 221 RL 216
           +L
Sbjct: 498 QL 499



to top

>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -3

Query: 452  SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 279
            ++ ++AEQ G E ERL    +  + Q +E  G++E E   +  L   +G+A+ D+ +  A
Sbjct: 969  AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025

Query: 278  SSRSLNMQQKTSLRLQLVE 222
            +   L M+ + +L  Q VE
Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044



to top

>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC|
           1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde
           dehydrogenase 2) (NAGSA dehydrogenase 2)
          Length = 306

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +3

Query: 246 SFLLHIQTARRSHPDIVFGFP 308
           S LL   TA R HPD VFGFP
Sbjct: 76  SRLLDASTAHRIHPDWVFGFP 96



to top

>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10|
          Length = 105

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 213 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 341
           LK FDQ +  RS    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54



to top

>FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein|
          Length = 90

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = -2

Query: 393 DYREAASQRDW--WEKRVRIKLH-KNPKLREGESQKRYQ---DGFFAQFEYAAENFFAPP 232
           D  E  SQ+ W  W+K   + ++ K   +   E +K  Q   D FFA  EYA    + PP
Sbjct: 29  DIFEHISQKAWADWQKHQTMLINEKRLNMMNAEDRKFLQAEMDKFFAGEEYAQAEGYVPP 88

Query: 231 A 229
           A
Sbjct: 89  A 89



to top

>REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonsense mRNA|
           reducing factor 3A) (Up-frameshift suppressor 3 homolog
           A) (hUpf3)
          Length = 476

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = -2

Query: 489 QTRSQRSGRPLLQFESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLRE 310
           + R +R  R L +     R E  R R   E    +E   Q+   EK VRIKL K P+  E
Sbjct: 234 EKREERRRRELEK--KRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLLKKPEKGE 291



to top

>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -2

Query: 444 SESRAERNRGRETRELVDYREAASQRDWWEKRVRIK-LHKNPKLREGESQKRYQ 286
           S+S+  ++ GRE R+++ + +   QR+   +R R + + +  + RE E ++R Q
Sbjct: 638 SKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQ 691



to top

>RS10_CHLTR (P0A4A1) 30S ribosomal protein S10|
          Length = 105

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 213 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 341
           LK FDQ +  +S    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDQSTANIVETAKRTGARVVGPIPLPTKREVYTVL 54



to top

>RS10_CHLMU (P0A4A2) 30S ribosomal protein S10|
          Length = 105

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 213 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 341
           LK FDQ +  +S    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDQSTANIVETAKRTGARVVGPIPLPTKREVYTVL 54



to top

>ATG9_YEAST (Q12142) Autophagy-related protein 9 (Cytoplasm to vacuole|
           targeting protein 7)
          Length = 997

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 155 HPLTPLEHSLRVPGKNWYGNPFPSAPTCSGSDLKN 51
           H ++P  +S R PGKNW  N        +G D+KN
Sbjct: 896 HNISPAIYSTRNPGKNWDNNN-------NGDDIKN 923



to top

>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
 Frame = -3

Query: 452  SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASS 273
            +L ++ E+       LE    +++QQA E   + +    C++I    K K + D+   + 
Sbjct: 1340 ALKEQLEEEEEAKRNLEKQISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQKDLESLTQ 1399

Query: 272  R------SLNMQQKTSLRLQ 231
            R      + +  +KT  RLQ
Sbjct: 1400 RYEEKIAAYDKLEKTKTRLQ 1419



to top

>KHSE_ZYMMO (O69015) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 320

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -2

Query: 450 FESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLREGESQKRYQDGFFA 271
           FE+ ++ E + G E ++ +DY +    +D     +   L  +  L EG+S K   D +FA
Sbjct: 158 FEAMNQIEAHMGDEVKKELDYLDKFWPKDLPRSVIHADLFPDNVLFEGDSLKGVIDFYFA 217

Query: 270 QFEYAA 253
             E  A
Sbjct: 218 CTEVRA 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,341,617
Number of Sequences: 219361
Number of extensions: 1430085
Number of successful extensions: 3852
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3851
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top