ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdf10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 Score = 642 bits (324), Expect = 0.0 Identities = 384/400 (96%), Gaps = 3/400 (0%) Strand = Plus / Plus Query: 1 gagaaggactcgtcgggagggctcgagtatctgtgtcgggagaggggggaattcttgaga 60 |||||| |||||||||||| ||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 58 gagaagaactcgtcgggagagctcgag-atctgtgccgggagagggggga-ttcttgaga 115 Query: 61 tcggaaccggaacaagtgggcgcgctcgggaaggggttaccataccaatttttcccagga 120 |||||| |||| |||| | ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 116 tcggaatcggatcaagcgtgcgcgctcgggaaggggttaccataacaaattttcccagga 175 Query: 121 acccttagtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttc 180 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 176 atccttagtgaatgttctaatggagtcaaagggtggcaagaagtctagcagtagtagttc 235 Query: 181 cctgatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 cctgatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgc 295 Query: 241 aaagaagttttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttg 300 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 296 caagaagttttctgctgcatactcaaactgcgcgaagaagccatcctgatatcgtttttg 355 Query: 301 gctttccccttcccgtagtttaggatttttatgcaattttattctgactcttttctccca 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gc-ttccccttcccgtagtttaggatttttatgcaattttattctgactcttttctccca 414 Query: 361 ccaatctctctggcttgctgcttcacgataatcgaccagt 400 |||||||||||||||||||||||||||||||||||||||| Sbjct: 415 ccaatctctctggcttgctgcttcacgataatcgaccagt 454 Score = 133 bits (67), Expect = 7e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 444 actcaaactgcaacaatggccgccccgacctctgcgatcgggtttgagggctacgagaag 503 |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| Sbjct: 498 actcaaactgcaacaatggctgccccggtctcagcgatcgggtttgagggctacgagaag 557 Query: 504 cgcctcgagatcaccttcaacgaggcatcaatctt 538 |||||||||||||||||| |||||||||||||| Sbjct: 558 cgcctcgagatcaccttctctgaggcatcaatctt 592
>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence Length = 2057 Score = 194 bits (98), Expect = 2e-46 Identities = 175/200 (87%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 191 |||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 217 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttccatgatgtatg 276 Query: 192 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 249 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 277 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 336 Query: 250 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 308 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 337 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 396 Query: 309 cttcccgtagtttaggattt 328 ||| |||||||||||||| Sbjct: 397 attctagtagtttaggattt 416 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 480 atcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| ||||||||||| |||||||| Sbjct: 588 atcgggtttgagggctatgagaagcgccttgagatcac 625 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 360 accaatctctctggcttgctgcttcacgataatcgaccagt 400 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 439 accaatctctctggcctgctgcttcctgataatcgaccagt 479
>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase Length = 1873 Score = 186 bits (94), Expect = 5e-44 Identities = 174/200 (87%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 191 |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| | Sbjct: 38 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttctatgatgtatg 97 Query: 192 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 249 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 98 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 157 Query: 250 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 308 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 158 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 217 Query: 309 cttcccgtagtttaggattt 328 ||| |||||||||||||| Sbjct: 218 attctagtagtttaggattt 237 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 480 atcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| ||||||||||| |||||||| Sbjct: 409 atcgggtttgagggctatgagaagcgccttgagatcac 446 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 360 accaatctctctggcttgctgcttcacgataatcgaccagt 400 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 260 accaatctctctggcctgctgcttcctgataatcgaccagt 300
>gb|AY103590.1| Zea mays PCO098412 mRNA sequence Length = 2400 Score = 186 bits (94), Expect = 5e-44 Identities = 174/200 (87%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 191 |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| | Sbjct: 287 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttctatgatgtatg 346 Query: 192 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 249 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 347 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 406 Query: 250 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 308 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 407 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 466 Query: 309 cttcccgtagtttaggattt 328 ||| |||||||||||||| Sbjct: 467 attctagtagtttaggattt 486 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 480 atcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| ||||||||||| |||||||| Sbjct: 658 atcgggtttgagggctatgagaagcgccttgagatcac 695 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 360 accaatctctctggcttgctgcttcacgataatcgaccagt 400 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 509 accaatctctctggcctgctgcttcctgataatcgaccagt 549
>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence Length = 1866 Score = 178 bits (90), Expect = 1e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Minus Query: 132 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 191 |||| ||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| | Sbjct: 1860 atgtactaatggagtctaagggtggcataaagactagcagtagtcgttccatgatgtatg 1801 Query: 192 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 249 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 1800 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 1741 Query: 250 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 308 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 1740 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 1681 Query: 309 cttcccgtagtttaggattt 328 ||| |||||||||||||| Sbjct: 1680 attctagtagtttaggattt 1661 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 480 atcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| ||||||||||| |||||||| Sbjct: 1489 atcgggtttgagggctatgagaagcgccttgagatcac 1452 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 360 accaatctctctggcttgctgcttcacgataatcgaccagt 400 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1638 accaatctctctggcctgctgcttcctgataatcgaccagt 1598
>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase Length = 2036 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 192 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 251 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 252 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 311 Query: 244 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 291 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 312 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 362 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 585 gggtttgagggctatgagaagcgccttgagatcac 619
>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full insert sequence Length = 2063 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 244 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 291 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcac 663
>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full insert sequence Length = 2059 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 244 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 291 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcac 663
>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full insert sequence Length = 2711 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 244 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 291 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcac 663
>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full insert sequence Length = 2063 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 244 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 291 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcac 663
>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA, complete cds Length = 1386 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 444 actcaaactgcaacaatggccgccccgacctctgcgatcgggtttgagggctacgagaag 503 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 61 actcgaactgcaacaatggctgccccgacctctgcgatcgggtttgagggctacgagaag 120 Query: 504 cgcctcgagatcaccttcaacgaggcatcaatctttgc 541 |||||| ||||||||||| |||||||||||||||||| Sbjct: 121 cgcctcaagatcaccttctccgaggcatcaatctttgc 158
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 12050 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 12109 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 12110 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 12169 Query: 244 gaagtt 249 |||||| Sbjct: 12170 gaagtt 12175 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 12526 gggtttgagggctatgagaagcgccttgagatcac 12560 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 269 tgcgcgaagaagccatcctgata 291 ||||||||||||||||||||||| Sbjct: 12281 tgcgcgaagaagccatcctgata 12303
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 24891465 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 24891524 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 24891525 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 24891584 Query: 244 gaagtt 249 |||||| Sbjct: 24891585 gaagtt 24891590 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 24891941 gggtttgagggctatgagaagcgccttgagatcac 24891975 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 269 tgcgcgaagaagccatcctgata 291 ||||||||||||||||||||||| Sbjct: 24891696 tgcgcgaagaagccatcctgata 24891718
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 12079 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 12138 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 12139 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 12198 Query: 244 gaagtt 249 |||||| Sbjct: 12199 gaagtt 12204 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 12555 gggtttgagggctatgagaagcgccttgagatcac 12589 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 269 tgcgcgaagaagccatcctgata 291 ||||||||||||||||||||||| Sbjct: 12310 tgcgcgaagaagccatcctgata 12332
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 153181 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 153240 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 153241 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 153300 Query: 244 gaagtt 249 |||||| Sbjct: 153301 gaagtt 153306 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 153657 gggtttgagggctatgagaagcgccttgagatcac 153691 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 269 tgcgcgaagaagccatcctgata 291 ||||||||||||||||||||||| Sbjct: 153412 tgcgcgaagaagccatcctgata 153434
>emb|AJ252213.1|OSA252213 Oryza sativa partial adometDC1 gene for S-adenosylmethionine decarboxylase 1, exons 1-3 Length = 2036 Score = 127 bits (64), Expect = 4e-26 Identities = 111/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 1097 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 1156 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 243 |||||| | ||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 1157 gatgtatgtagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 1216 Query: 244 gaagtt 249 |||||| Sbjct: 1217 gaagtt 1222 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 1573 gggtttgagggctatgagaagcgccttgagatcac 1607 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 269 tgcgcgaagaagccatcctgata 291 ||||||||||||||||||||||| Sbjct: 1328 tgcgcgaagaagccatcctgata 1350
>gb|BT013082.1| Lycopersicon esculentum clone 114340R, mRNA sequence Length = 380 Score = 117 bits (59), Expect = 4e-23 Identities = 94/105 (89%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 128 gtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctg 184 ||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||||| | Sbjct: 152 gtgaatgatctaatggagtcaaaaggtggtaaaaagaagtctagtagtagtagttcctta 211 Query: 185 atgtacgaagctcccctcggctacagcattgaagacgttcgacca 229 | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 ttttacgaagctcccctcggctacagcattgaagacgttcgacca 256
>gb|AY103940.1| Zea mays PCO064624 mRNA sequence Length = 2008 Score = 109 bits (55), Expect = 1e-20 Identities = 143/171 (83%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 129 tgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---c 182 ||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| | Sbjct: 208 tgaatgttctaatggagtccaagggtggcaagaagaagtctagcagtagtcgttcctccc 267 Query: 183 tgatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaa 242 ||||||||||||||||||| ||||||||||| || || | || || || || ||| | Sbjct: 268 tgatgtacgaagctccccttggctacagcatcgaggatatccgccctgcaggcggcatca 327 Query: 243 agaagttttctgctgcatattcaaactgcgcgaagaagccatcctgatatc 293 ||||||| || ||||| || || |||||||||| ||||||||||||||||| Sbjct: 328 agaagttctccgctgcttactcgaactgcgcgaggaagccatcctgatatc 378
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 15332978 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 15332922 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 15332921 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 15332873 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 15332497 gggtttgaaggctatgagaagcgccttgagat 15332466
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 112167 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 112111 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 112110 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 112062 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 111686 gggtttgaaggctatgagaagcgccttgagat 111655
>dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 gene for S-adenosylmethionine decarboxylase, complete cds Length = 2952 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 1014 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 1070 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 1071 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 1119 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 1495 gggtttgaaggctatgagaagcgccttgagat 1526
>dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full insert sequence Length = 2047 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 217 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 273 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 274 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 322 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 595 gggtttgaaggctatgagaagcgccttgagat 626
>dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full insert sequence Length = 2002 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 218 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 274 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 275 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 323 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 596 gggtttgaaggctatgagaagcgccttgagat 627
>dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full insert sequence Length = 2546 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 743 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 799 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 800 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 848 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 1121 gggtttgaaggctatgagaagcgccttgagat 1152
>dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full insert sequence Length = 2034 Score = 105 bits (53), Expect = 1e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 132 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 188 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 217 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 273 Query: 189 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 274 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 322 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagat 514 |||||||| ||||| ||||||||||| ||||| Sbjct: 595 gggtttgaaggctatgagaagcgccttgagat 626
>ref|XM_506863.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.33 mRNA Length = 1982 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 231 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 290 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 291 gaagctcccctcggctacagcattga 316 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 590 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 630
>emb|Y07768.1|DSSADMEDC D.stramonium mRNA for S-adenosylmethionine decarboxylase Length = 1839 Score = 99.6 bits (50), Expect = 9e-18 Identities = 89/102 (87%) Strand = Plus / Plus Query: 128 gtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatg 187 ||||||| ||||||||||||||| ||||| |||||| |||||||||||| | | Sbjct: 133 gtgaatgatctaatggagtcaaaaggtgggaaaaagaagtctagtagtagttccttattt 192 Query: 188 tacgaagctcccctcggctacagcattgaagacgttcgacca 229 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tacgaagctcccctcggctacagcattgaagacgttcgacca 234
>emb|AJ251899.1|OSA251899 Oryza sativa mRNA for S-adenosylmethionine decarboxylase 2 (adometDC2 gene) Length = 1971 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 217 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 276 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 277 gaagctcccctcggctacagcattga 302 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 576 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 616
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 24065827 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24065886 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 24065887 gaagctcccctcggctacagcattga 24065912 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 24066277 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 24066317
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 24568 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24627 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 24628 gaagctcccctcggctacagcattga 24653 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 25018 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 25058
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 100865 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 100924 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 100925 gaagctcccctcggctacagcattga 100950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 101315 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 101355
>emb|AJ252214.1|OSA252214 Oryza sativa partial adometDC2 gene for S-adenosylmethionine decarboxylase 2, exons 1-3 Length = 1721 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 1129 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 1188 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 1189 gaagctcccctcggctacagcattga 1214 Score = 42.1 bits (21), Expect = 1.9 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| ||||||||||||| Sbjct: 1578 gcgatcgggtttgagggatatgagaa-agcctcgagatcac 1617
>dbj|AK070269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047N04, full insert sequence Length = 1182 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 228 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 287 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 288 gaagctcccctcggctacagcattga 313 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 587 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 627
>dbj|AK070259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041P13, full insert sequence Length = 1982 Score = 99.6 bits (50), Expect = 9e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 190 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 231 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 290 Query: 191 gaagctcccctcggctacagcattga 216 |||||||||||||||||||||||||| Sbjct: 291 gaagctcccctcggctacagcattga 316 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 590 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 630
>ref|XM_466676.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1750 Score = 95.6 bits (48), Expect = 1e-16 Identities = 76/84 (90%), Gaps = 6/84 (7%) Strand = Plus / Plus Query: 139 aatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtacga 192 ||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 1 aatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacga 60 Query: 193 agctcccctcggctacagcattga 216 |||||||||||||||||||||||| Sbjct: 61 agctcccctcggctacagcattga 84 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 358 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 398
>dbj|AK062133.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E08, full insert sequence Length = 1750 Score = 95.6 bits (48), Expect = 1e-16 Identities = 76/84 (90%), Gaps = 6/84 (7%) Strand = Plus / Plus Query: 139 aatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtacga 192 ||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 1 aatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacga 60 Query: 193 agctcccctcggctacagcattga 216 |||||||||||||||||||||||| Sbjct: 61 agctcccctcggctacagcattga 84 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 477 gcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 358 gcgatcgggtttgagggatatgagaaacgcctcgagatcac 398
>gb|AY536644.1| Brassica juncea S-adenosylmethionine decarboxylase (SAMDC4) mRNA, complete cds Length = 1705 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/89 (88%), Gaps = 3/89 (3%) Strand = Plus / Plus Query: 140 atggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgtacgaagct 196 ||||||||||| ||||| |||||| |||||||||||||||||| | | ||||||||| Sbjct: 139 atggagtcaaaaggtggtaaaaagaagtctagcagtagtagttccttattttacgaagct 198 Query: 197 cccctcggctacagcattgaagacgttcg 225 |||||||| |||||||||||||||||||| Sbjct: 199 cccctcggttacagcattgaagacgttcg 227
>gb|AF321141.1|AF321141S1 Nicotiana tabacum S-adenosylmethionine decarboxylase mRNA, partial cds Length = 639 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 169 cagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagacgttcgacc 228 ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 cagtagtagttccttattttacgaagctcccctcggctacagcattgaagacgttcgacc 81 Query: 229 a 229 | Sbjct: 82 a 82
>gb|AY232672.1| Narcissus pseudonarcissus S-adenosylmethionine decarboxylase (SAMdc) mRNA, complete cds Length = 1812 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 182 aagtctagcagtagtaattccatgcaatacgaagctcccctcggctacagcattgaagac 241 Query: 221 gttcg 225 ||||| Sbjct: 242 gttcg 246 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 471 acctctgcgatcgggtttgagggctacgagaagcgcctcgagatcac 517 |||||| | |||||||| ||||||| ||||||||||||||||||||| Sbjct: 502 acctctccaatcgggttcgagggcttcgagaagcgcctcgagatcac 548
>ref|NM_001035545.1| Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase AT3G02470 (SAMDC) transcript variant AT3G02470.2 mRNA, complete cds Length = 2061 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 422 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 481 Query: 221 gttcg 225 ||||| Sbjct: 482 gttcg 486
>ref|NM_111114.2| Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase AT3G02470 (SAMDC) transcript variant AT3G02470.1 mRNA, complete cds Length = 1953 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 329 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 388 Query: 221 gttcg 225 ||||| Sbjct: 389 gttcg 393
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 |||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||| Sbjct: 107086 aagtctagcagtagtaaatccttattctacgaagctcccctcggctacagcattgaagac 107145 Query: 221 gttcg 225 ||||| Sbjct: 107146 gttcg 107150 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 474 tctgcgatcgggtttgagggctacgagaagcgcctcgagat 514 ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct: 107475 tctgcaatcggatttgaaggctacgagaagcggctcgagat 107515
>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete sequence Length = 103904 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 25483 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 25542 Query: 221 gttcg 225 ||||| Sbjct: 25543 gttcg 25547
>emb|Y07765.1|ATSADMEDC A.thaliana gene encoding S-adenosylmethionine decarboxylase Length = 2369 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 720 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 779 Query: 221 gttcg 225 ||||| Sbjct: 780 gttcg 784
>gb|AF428468.1|AF428468 Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, complete cds Length = 1807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315 Query: 221 gttcg 225 ||||| Sbjct: 316 gttcg 320
>gb|AY054185.1| Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, complete cds Length = 1781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315 Query: 221 gttcg 225 ||||| Sbjct: 316 gttcg 320
>gb|AY042824.1| Arabidopsis thaliana S-adenosylmethionine decarboxylase (F16B3.10) mRNA, complete cds Length = 1876 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315 Query: 221 gttcg 225 ||||| Sbjct: 316 gttcg 320
>gb|U63633.1|ATU63633 Arabidopsis thaliana S-adenosylmethionine decarboxylase (SAMdc) mRNA, complete cds Length = 1823 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 161 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 220 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 247 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 306 Query: 221 gttcg 225 ||||| Sbjct: 307 gttcg 311
>gb|AY730047.1| Phaseolus vulgaris putative SAMDC uORF mRNA, complete cds Length = 162 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcgacca 229 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58 tacgaagctcccctcggctacagcattgaagacattcgacca 99
>gb|S74514.1| S-adenosylmethionine decarboxylase [Solanum tuberosum=potatoes, cv. Desiree, Genomic, 2904 nt] Length = 2904 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/106 (84%), Gaps = 4/106 (3%) Strand = Plus / Plus Query: 128 gtgaatgttctaatggagtcaaagggtggcaaa---aagtctagcagtagtagttccctg 184 ||||||| ||||||||||||||| ||||| ||| |||||||| |||||||||||| | Sbjct: 1101 gtgaatgatctaatggagtcaaaaggtggtaaaaagaagtctagtagtagtagttcctta 1160 Query: 185 atgtacg-aagctcccctcggctacagcattgaagacgttcgacca 229 | |||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 1161 ttttacgtaagctcccctcggcatcagcattagagacgttcgacca 1206
>dbj|AB077442.2| Malus x domestica SAMDC mRNA for S-adenosylmethionine decarboxylase, complete cds, clone:MdSAMDC2 Length = 1938 Score = 69.9 bits (35), Expect = 8e-09 Identities = 76/89 (85%), Gaps = 3/89 (3%) Strand = Plus / Plus Query: 137 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgtacgaa 193 ||||||||||| || |||||||||||| ||||| ||||||| || || | |||||| Sbjct: 251 ctaatggagtccaaaggtggcaaaaaggattctagtagtagtaaatcattgttctacgaa 310 Query: 194 gctcccctcggctacagcattgaagacgt 222 ||||||||||| ||||||||||||||||| Sbjct: 311 gctcccctcggttacagcattgaagacgt 339
>gb|AY491510.2| Daucus carota S-adenosylmethionine decarboxylase (samdc1) gene, complete cds Length = 2849 Score = 67.9 bits (34), Expect = 3e-08 Identities = 86/103 (83%), Gaps = 9/103 (8%) Strand = Plus / Plus Query: 129 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagt------agtagt---t 179 ||||||||||||||||| |||| ||||| ||||||||||| ||| |||||| | Sbjct: 1126 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagtagtagtaaat 1185 Query: 180 ccctgatgtacgaagctcccctcggctacagcattgaagacgt 222 || || | ||||||||||||||||| ||||||||||||||||| Sbjct: 1186 ccttgttctacgaagctcccctcggatacagcattgaagacgt 1228
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 ||||||||||||||||| |||||||||||||||||||| Sbjct: 111914 tacgaagctcccctcggttacagcattgaagacgttcg 111951 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 474 tctgcgatcgggtttgagggctacgagaagcgcctcgagat 514 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 112272 tctgcgatcggatttgaaggctacgagaagcggctcgagat 112312
>gb|AY491511.1| Daucus carota S-adenosylmethionine decarboxylase (samdc2) gene, complete cds Length = 2843 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 129 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagt 178 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||| Sbjct: 1124 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagt 1173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgt 222 ||||||||||||||||| ||||||||||||||||| Sbjct: 1192 tacgaagctcccctcggatacagcattgaagacgt 1226
>emb|X95729.1|BJSAMDC1G B.juncea mRNA for S-adenosylmethionine decarboxylase Length = 1653 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 ||||||||||||||||| |||||||||||||||||||| Sbjct: 201 tacgaagctcccctcggttacagcattgaagacgttcg 238
>gb|AF488307.1| Glycine max S-adenosylmethionine decarboxylase (SAMDC) mRNA, complete cds Length = 1824 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcgacca 229 ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 278 tacgaagctcccctcggatacagcattgaagacgttagacca 319
>gb|AF420239.1|AF420239 Dendrobium crumenatum S-adenosyl-L-methionine decarboxylase (Samdc) mRNA, complete cds Length = 1894 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 ||||||| |||||||||||||||||||||||||||||| Sbjct: 272 tacgaagttcccctcggctacagcattgaagacgttcg 309 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcaccttc 521 ||||| |||||||| || |||||||| |||||||||||| Sbjct: 557 gggttcgagggctatgaaaagcgccttgagatcaccttc 595
>gb|AY444341.1| Brassica juncea S-adenosyl-L-methionine decarboxylase (SAMDC2) gene, complete cds Length = 4456 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 ||||||||||||||||| |||||||||||||||||||| Sbjct: 2891 tacgaagctcccctcggttacagcattgaagacgttcg 2928 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 473 ctctgcgatcgggtttgagggctacgagaagcgcctcga 511 |||||| |||||||| || |||||||||||||||||||| Sbjct: 3205 ctctgcaatcgggttcgaaggctacgagaagcgcctcga 3243
>gb|AF334029.1|AF334029 Daucus carota S-adenosyl-methionine decarboxylase (SAMDC) mRNA, complete cds Length = 1761 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 129 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagt 178 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||| Sbjct: 139 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagt 188 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgt 222 ||||||||||||||||| ||||||||||||||||| Sbjct: 207 tacgaagctcccctcggatacagcattgaagacgt 241
>gb|AF215665.1|AF215665 Brassica juncea S-adenosyl-L-methionine decarboxylase (SAMDC3) mRNA, complete cds Length = 1743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 ||||||||||||||||| |||||||||||||||||||| Sbjct: 233 tacgaagctcccctcggttacagcattgaagacgttcg 270 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 474 tctgcgatcgggtttgagggctacgagaagcgcctcgag 512 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 480 tctgcaatcggctttgaaggctacgagaagcgcctcgag 518
>gb|U80916.1|BJU80916 Brassica juncea S-adenosyl-L-methionine decarboxylase mRNA, complete cds Length = 1676 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 ||||||||||||||||| |||||||||||||||||||| Sbjct: 194 tacgaagctcccctcggttacagcattgaagacgttcg 231 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 473 ctctgcgatcgggtttgagggctacgagaagcgcctcga 511 |||||| |||||||| || |||||||||||||||||||| Sbjct: 420 ctctgcaatcgggttcgaaggctacgagaagcgcctcga 458
>dbj|AB062360.1| Phaseolus lunatus SAMDC mRNA for S-adenosylmethionine decarboxylase, complete cds Length = 1518 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcgacca 229 |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 2 tacgaagctcccctcggctatagcattgaagacattcgacca 43
>gb|U12573.1|CRU12573 Catharanthus roseus S-adenosyl-L-methionine decarboxylase proenzyme mRNA, complete cds Length = 1864 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 127 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 183 |||||||| |||||||||||| || ||||| || ||| ||||| ||||||| ||| | Sbjct: 147 agtgaatgatctaatggagtctaaaggtgggaagaagaagtctagtagtagtaaatcctt 206 Query: 184 gatgtacgaagctcccctcggctacagcattgaagacgt 222 | ||||||||||||||||| ||||||||||||||||| Sbjct: 207 attctacgaagctcccctcggatacagcattgaagacgt 245
>emb|AJ704800.1| Prunus persica partial samdc gene for S-adenosylmethionine decarboxylase, exons 1-3 Length = 1189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgt 222 ||||||||||||||||| ||||||||||||||||| Sbjct: 52 tacgaagctcccctcggttacagcattgaagacgt 86
>gb|AF033100.1|AF033100 Nicotiana tabacum S-adenosylmethionine decarboxylase gene, complete cds Length = 2325 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| |||||||||||||| |||||||||||||| Sbjct: 337 tacgaagcacccctcggctacagtattgaagacgttcg 374
>gb|AY104070.1| Zea mays PCO115703 mRNA sequence Length = 2000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 486 tttgagggctacgagaagcgcctcgagatcac 517 ||||||||||| |||||||||||||||||||| Sbjct: 563 tttgagggctatgagaagcgcctcgagatcac 594 Score = 54.0 bits (27), Expect = 5e-04 Identities = 86/105 (81%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 136 tctaatggagtcaaagggtggcaaaaagtctagcagtagta---gttccctgatgtacga 192 |||||||||||| || |||||||| |||||||| ||||||| || | |||||||| Sbjct: 178 tctaatggagtcgaaaggtggcaagaagtctagtagtagtaatagtaatttcatgtacga 237 Query: 193 agctcccctcggctacagcattgaagacgttcgaccagctggagg 237 ||||||||| ||||||| || || |||||||| ||||| ||||| Sbjct: 238 agctccccttggctacaagatcgaggacgttcgcccagccggagg 282
>ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 46 gggtttgagggctatgagaagcgccttgagatcac 80
>gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylmethionine decarboxylase mRNA, complete cds Length = 1197 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 46 gggtttgagggctatgagaagcgccttgagatcac 80
>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds Length = 1560 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 gggtttgagggctacgagaagcgcctcgagatcac 517 |||||||||||||| ||||||||||| |||||||| Sbjct: 136 gggtttgagggctatgagaagcgccttgagatcac 170
>ref|NM_001036811.1| Arabidopsis thaliana adenosylmethionine decarboxylase AT5G15950 transcript variant AT5G15950.2 mRNA, complete cds Length = 1881 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| ||||| || |||||||||||||||||||| Sbjct: 328 tacgaagcaccccttggttacagcattgaagacgttcg 365
>ref|NM_121600.2| Arabidopsis thaliana adenosylmethionine decarboxylase AT5G15950 transcript variant AT5G15950.1 mRNA, complete cds Length = 1748 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| ||||| || |||||||||||||||||||| Sbjct: 244 tacgaagcaccccttggttacagcattgaagacgttcg 281
>gb|BT013281.1| Lycopersicon esculentum clone 134862F, mRNA sequence Length = 1812 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcgacca 229 |||||||||||||| || |||| |||||||||||||||||| Sbjct: 258 tacgaagctcccctaggttacactattgaagacgttcgacca 299
>emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project) Length = 74687 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| ||||| || |||||||||||||||||||| Sbjct: 25193 tacgaagcaccccttggttacagcattgaagacgttcg 25230
>emb|AJ252212.1|ATH252212 Arabidopsis thaliana adometDC2 gene for S-adenosylmethionine decarboxylase, exons 1-3 Length = 2072 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| ||||| || |||||||||||||||||||| Sbjct: 651 tacgaagcaccccttggttacagcattgaagacgttcg 688
>emb|AJ251915.1|ATH251915 Arabidopsis thaliana mRNA for S-adenosylmethionine decarboxylase (adoMetDC2 gene)and ORF Length = 1723 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| ||||| || |||||||||||||||||||| Sbjct: 234 tacgaagcaccccttggttacagcattgaagacgttcg 271
>gb|U60592.1|PSU60592 Pisum sativum putative ORF; conserved in 5' leaders of plant SAMdC and S-adenosylmethionine decarboxylase mRNAs, complete cds Length = 1829 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| |||||||| ||||||||||||||| |||| Sbjct: 262 tacgaagcccccctcggatacagcattgaagacattcg 299
>gb|AF436825.1|AF436825 Arabidopsis thaliana AT5g15950/F1N13_90 mRNA, complete cds Length = 1728 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 188 tacgaagctcccctcggctacagcattgaagacgttcg 225 |||||||| ||||| || |||||||||||||||||||| Sbjct: 245 tacgaagcaccccttggttacagcattgaagacgttcg 282
>gb|U38527.1|DCU38527 Dianthus caryophyllus S-adenosylmethionine 2 decarboxylase mRNA, complete cds Length = 1829 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 200 ctcggctacagcattgaagacgttcgacca 229 ||||||||||||||||||||| |||||||| Sbjct: 222 ctcggctacagcattgaagaccttcgacca 251
>emb|AJ567368.2|VVI567368 Vitis vinifera samdc gene for S-adenosylmethionine decarboxylase proenzyme, mRNA Length = 1709 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 191 gaagctcccctcggctacagcattgaagacgttcgacc 228 |||||||| || |||||||||||||||||| ||||||| Sbjct: 144 gaagctcctcttggctacagcattgaagacattcgacc 181
>gb|BT013882.1| Lycopersicon esculentum clone 132862F, mRNA sequence Length = 1849 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 191 gaagctcccctcggctacagcattgaagacgttcgacca 229 ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 213 gaagcaccccttggctacagtattgaagacgttagacca 251 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 128 gtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagta 173 ||||||| |||||||||||| || ||||| || |||||||| |||| Sbjct: 153 gtgaatgatctaatggagtctaaaggtgggaagaagtctagtagta 198
>dbj|AB077441.2| Malus x domestica SAMDC mRNA for S-adenosylmethionine decarboxylase, complete cds, clone:MdSAMDC1 Length = 1875 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 140 atggagtcaaagggtggcaaaaagtctagcagtagtagt 178 |||||||| || ||||| ||||||||||| ||||||||| Sbjct: 159 atggagtccaaaggtggtaaaaagtctagtagtagtagt 197
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 490 agggctacgagaagcgcctcgagatca 516 |||||||||||||| |||||||||||| Sbjct: 2179454 agggctacgagaagggcctcgagatca 2179428
>gb|U94786.1|DCU94786 Dianthus caryophyllus S-adenosylmethionine decarboxylase (gcsdc9) gene, complete cds Length = 4311 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gctcccctcggctacagcattgaagacgttcgacc 228 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 2692 gctccactcggttacagcattgaggacgttcgacc 2726
>emb|CT573229.8| Zebrafish DNA sequence from clone DKEY-11D7 in linkage group 1, complete sequence Length = 146843 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ttttctgctgcatattcaaact 269 |||||||||||||||||||||| Sbjct: 46886 ttttctgctgcatattcaaact 46907
>emb|AL137800.12| Human DNA sequence from clone RP1-127C7 on chromosome 1q25.1-31.1 Contains the 3' end of the C1orf16 gene for chromosome 1 open reading frame 16, the NCF2 gene for neutrophil cytosolic factor 2 (65kDa, chronic granulomatous disease, autosomal 2), a novel gene, the ARPC5 gene for actin related protein 2/3 complex subunit 5 (16kDa), the 5' end of the RGL1 gene for ral guanine nucleotide dissociation stimulator-like 1, a novel gene (MGC26594) and a CpG island, complete sequence Length = 185832 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caattttattctgactctttt 354 ||||||||||||||||||||| Sbjct: 5443 caattttattctgactctttt 5463
>gb|AY741575.1| Uncultured sulfate-reducing bacterium clone PIMO3E11 dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1848 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 aatctctctggcttgctgctt 383 ||||||||||||||||||||| Sbjct: 1629 aatctctctggcttgctgctt 1649
>ref|NM_113454.2| Arabidopsis thaliana adenosylmethionine decarboxylase AT3G25570 mRNA, complete cds Length = 1527 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 tacagcattgaagacgttcgacca 229 |||||||||||||||||| ||||| Sbjct: 79 tacagcattgaagacgttagacca 102
>gb|AY421966.1| Cryptococcus gattii strain ATCC 32609 MAT-alpha mating locus, fragment III Length = 17317 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tttttatgcaattttattct 345 |||||||||||||||||||| Sbjct: 16882 tttttatgcaattttattct 16863
>ref|XM_475588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 cgggtttgagggctacgagaagcg 505 |||||||||||||| ||||||||| Sbjct: 12 cgggtttgagggcttcgagaagcg 35
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tctctctggcttgctgcttc 384 |||||||||||||||||||| Sbjct: 59726 tctctctggcttgctgcttc 59707
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 482 cgggtttgagggctacgagaagcg 505 |||||||||||||| ||||||||| Sbjct: 33548 cgggtttgagggcttcgagaagcg 33525
>emb|CT025565.5| Mouse DNA sequence from clone RP24-126K5 on chromosome 17, complete sequence Length = 175523 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 tagtttaggatttttatgcaattttatt 343 |||||||||||||||||| |||| |||| Sbjct: 77096 tagtttaggatttttatgaaattctatt 77069
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 attttattctgactcttttc 355 |||||||||||||||||||| Sbjct: 43595 attttattctgactcttttc 43614
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 attttattctgactcttttc 355 |||||||||||||||||||| Sbjct: 86873 attttattctgactcttttc 86892
>emb|Z82204.1|HS362G17 Human DNA sequence from clone RP3-362G17 on chromosome X Contains part of the FGF13 gene for fibroblast growth factor 13, complete sequence Length = 75145 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 caaagaagttttctgctgca 259 |||||||||||||||||||| Sbjct: 32059 caaagaagttttctgctgca 32078
>gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, complete sequence Length = 170361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tctctctggcttgctgcttc 384 |||||||||||||||||||| Sbjct: 10144 tctctctggcttgctgcttc 10163
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aaaaagtctagcagtagtag 177 |||||||||||||||||||| Sbjct: 22368 aaaaagtctagcagtagtag 22349
>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library) complete sequence Length = 236281 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 atttttatgcaattttattc 344 |||||||||||||||||||| Sbjct: 200817 atttttatgcaattttattc 200798
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 482 cgggtttgagggctacgagaagcg 505 |||||||||||||| ||||||||| Sbjct: 2357948 cgggtttgagggcttcgagaagcg 2357925
>emb|BX823121.1|CNS0A7A6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1700 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 tacagcattgaagacgttcgacca 229 |||||||||||||||||| ||||| Sbjct: 282 tacagcattgaagacgttagacca 305
>gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosome 17, complete sequence Length = 182101 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tagtttaggatttttatgcaattttatt 343 |||||||||||||||||| |||| |||| Sbjct: 133556 tagtttaggatttttatgaaattctatt 133583
>gb|AC011238.8| Homo sapiens BAC clone RP11-374C5 from 2, complete sequence Length = 155764 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 atttttatgcaattttattc 344 |||||||||||||||||||| Sbjct: 151840 atttttatgcaattttattc 151859
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tacagcattgaagacgttcgacca 229 |||||||||||||||||| ||||| Sbjct: 75562 tacagcattgaagacgttagacca 75539
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 attttattctgactcttttc 355 |||||||||||||||||||| Sbjct: 118579 attttattctgactcttttc 118560
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 attttattctgactcttttc 355 |||||||||||||||||||| Sbjct: 115766 attttattctgactcttttc 115747
>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b, complete sequence Length = 84914 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 186 tgtacgaagctcccctcggctacagcattgaagacgttcgacca 229 |||| |||||||| |||| |||| |||||||||||||||||| Sbjct: 49422 tgtatgaagctcctctcgattacataattgaagacgttcgacca 49379
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 482 cgggtttgagggctacgagaagcg 505 |||||||||||||| ||||||||| Sbjct: 85863 cgggtttgagggcttcgagaagcg 85840 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,833,809 Number of Sequences: 3902068 Number of extensions: 3833809 Number of successful extensions: 68892 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68464 Number of HSP's gapped (non-prelim): 363 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
