ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdf08 |
|---|---|
| Clone Library Name | barley_pub |
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 389 bits (999), Expect = e-108 Identities = 194/199 (97%), Positives = 198/199 (99%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT Sbjct: 215 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 274 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 275 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 334 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRLVFQVCTAKMNL DEVDLEDYVSRPDKISAA+ITAICQEAGMHAVRKNRYVILPKDF Sbjct: 335 QKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394 Query: 543 EKGYRTNVKKPESDFDFYK 599 EKGYRTNVKKP++DF+FYK Sbjct: 395 EKGYRTNVKKPDTDFEFYK 413
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 383 bits (983), Expect = e-106 Identities = 191/199 (95%), Positives = 197/199 (98%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT Sbjct: 210 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 269 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 270 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRLVFQVCT+KMNLSDEVDLEDYVSRPDKISAA+I AICQEAGMHAVRKNRYVILPKDF Sbjct: 330 QKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 389 Query: 543 EKGYRTNVKKPESDFDFYK 599 EKGYR NVKKP++DF+FYK Sbjct: 390 EKGYRANVKKPDTDFEFYK 408
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 355 bits (912), Expect = 4e-98 Identities = 171/199 (85%), Positives = 190/199 (95%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+PAIIFIDE+DAIAT RFDAQT Sbjct: 217 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQT 276 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRIL+ELLNQMDGFDQT NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 277 GADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 336 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRL+F TAKMNLS+EVDLE++V+RPD++S ADI AICQEAGM+AVR+NRY++LPKDF Sbjct: 337 QKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDF 396 Query: 543 EKGYRTNVKKPESDFDFYK 599 EKGY+ N+KK ES+++FYK Sbjct: 397 EKGYKNNIKKDESEYEFYK 415
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 351 bits (900), Expect = 1e-96 Identities = 171/198 (86%), Positives = 188/198 (94%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT+AAFIRVVGSEFVQKYLGEGPR+VRDVFRLA+EN+PAIIFIDE+DAIAT RFDAQT Sbjct: 205 AHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 264 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRILMELLNQMDGFD +VNVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 265 GADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRL+FQV T+KMNLSDEVDLEDYVSRPDK+S A+I +ICQEAGMHA+RKNRYVILPKDF Sbjct: 325 QKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDF 384 Query: 543 EKGYRTNVKKPESDFDFY 596 EKGY+ ++KK +F+FY Sbjct: 385 EKGYKASIKKNTHEFNFY 402
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 346 bits (887), Expect = 3e-95 Identities = 170/199 (85%), Positives = 185/199 (92%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQT Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRL+F T+KMNLS+EVDLEDYV+RPDKIS ADI +ICQE+GM AVR+NRY++L KDF Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399 Query: 543 EKGYRTNVKKPESDFDFYK 599 EK Y+T +KK E + +FYK Sbjct: 400 EKAYKTVIKKDEQEHEFYK 418
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 346 bits (887), Expect = 3e-95 Identities = 170/199 (85%), Positives = 185/199 (92%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQT Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRL+F T+KMNLS+EVDLEDYV+RPDKIS ADI +ICQE+GM AVR+NRY++L KDF Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399 Query: 543 EKGYRTNVKKPESDFDFYK 599 EK Y+T +KK E + +FYK Sbjct: 400 EKAYKTVIKKDEQEHEFYK 418
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 338 bits (867), Expect = 7e-93 Identities = 167/199 (83%), Positives = 181/199 (90%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQT Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRL+F T+KMNLS+EVDLEDYV+RPDKIS ADI +ICQ GM AVR+ Y++L KDF Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399 Query: 543 EKGYRTNVKKPESDFDFYK 599 EK Y+T +KK E + +FYK Sbjct: 400 EKAYKTVIKKDEQEHEFYK 418
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 327 bits (839), Expect = 1e-89 Identities = 162/199 (81%), Positives = 180/199 (90%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A +T A+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P+IIFIDE+DAIAT RFDAQT Sbjct: 216 AANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQT 275 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQRIL+ELLNQMDGFDQ+ NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRR Sbjct: 276 GADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 335 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRLVF ++MNLSD+VDLED+V+RPDKIS ADI +ICQEAGM AVR+NRYV+L KD Sbjct: 336 QKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDL 395 Query: 543 EKGYRTNVKKPESDFDFYK 599 EK Y+ VKK +DF+FYK Sbjct: 396 EKAYKNVVKKDTNDFEFYK 414
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 289 bits (740), Expect = 4e-78 Identities = 144/198 (72%), Positives = 166/198 (83%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+HT A FIRV GSEFVQKYLGEGPRMVRDVFRLA+E AP+I+FIDEVD+IAT RFDA T Sbjct: 189 ANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDAST 248 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 ADREVQR+L+ELLNQMDGFD NVKVIMATNRADT+DPALLRPGRLDRKIEFPLPDRR Sbjct: 249 SADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRR 308 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 QKRLVF T+KM+L+D VD+E V RP+KIS ADI +ICQEAGM AVR +RY++ +DF Sbjct: 309 QKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368 Query: 543 EKGYRTNVKKPESDFDFY 596 E+ Y V++ + FY Sbjct: 369 EEAYSKVVERSGTQPAFY 386
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 280 bits (715), Expect = 3e-75 Identities = 150/201 (74%), Positives = 165/201 (82%), Gaps = 2/201 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRVVGSEFVQKYLGEGPRMVRDVFR+A+ENAPAIIFIDE+DAIAT RFDAQT Sbjct: 189 ANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQT 248 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDR 359 GADREVQRIL+ELL QMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFP DR Sbjct: 249 GADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDR 308 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 RQ+RLVFQ TAKM LS EVDL+ ++ RPD S A I AI Q+AG+ AVRK+R VIL D Sbjct: 309 RQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSD 368 Query: 540 FEKGYRTNVKKPESD-FDFYK 599 E+ Y VK + + F FYK Sbjct: 369 IEEAYARAVKPTDMEQFAFYK 389
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 278 bits (710), Expect = 1e-74 Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 3/202 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T AAFIRV GSEFV KYLGEGPRMVRDVFRLA+ENAP+IIFIDEVD+IAT RFDAQT Sbjct: 227 ANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQT 286 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDR 359 G+DREVQRIL+ELL QMDGFDQ+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DR Sbjct: 287 GSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDR 346 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 R++RL+F +KM+L+ E DL+ + R D +S A I AI QEAG+ AVRKNRYVIL D Sbjct: 347 RERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSD 406 Query: 540 FEKGYRTNVKKPES--DFDFYK 599 E+ Y T VK + FDFYK Sbjct: 407 LEEAYATQVKTDNTVDKFDFYK 428
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 272 bits (696), Expect = 5e-73 Identities = 145/203 (71%), Positives = 169/203 (83%), Gaps = 4/203 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ TTA+FIRV GSEFVQKYLGEGPRMVRDVFR+A+EN+PAIIFIDE+DAIAT RFDAQT Sbjct: 221 ANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQT 280 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDR 359 GADREVQRIL+ELLNQMDGF+Q+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DR Sbjct: 281 GADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDR 340 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPK- 536 R++RL+F +KM+LS EVDL+ + R + +S A I AI QEAG+ AVRKNRY I+P+ Sbjct: 341 RERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRS 400 Query: 537 DFEKGYRTNVKK-PESD-FDFYK 599 D E Y VK E+D +FY+ Sbjct: 401 DLEDAYAAQVKTGQEADRLEFYR 423
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 235 bits (600), Expect = 6e-62 Identities = 108/197 (54%), Positives = 156/197 (79%), Gaps = 5/197 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+R+VGSE +QKYLG+GP+MVR++FR+A+ENAP+I+FIDE+DA+ T R+D+ + Sbjct: 243 ANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNS 302 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKV+MATNR ++LDPAL+RPGR+DRKIEFPLPD + Sbjct: 303 GGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEK 362 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 KR +FQ+ T++M L EV+LE++++ D++S ADI A+C EAG+ A+R+ R + +DF Sbjct: 363 TKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDF 422 Query: 543 EKG-----YRTNVKKPE 578 +K YR PE Sbjct: 423 QKSKENVLYRKKEGAPE 439
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 233 bits (595), Expect = 2e-61 Identities = 106/182 (58%), Positives = 150/182 (82%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DAI T R+D+ + Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 K+ +FQ+ T++M L+D+V L+D + D +S ADI AIC EAG+ A+R+ R + +DF Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419 Query: 543 EK 548 +K Sbjct: 420 KK 421
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 233 bits (595), Expect = 2e-61 Identities = 106/182 (58%), Positives = 150/182 (82%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DAI T R+D+ + Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 K+ +FQ+ T++M L+D+V L+D + D +S ADI AIC EAG+ A+R+ R + +DF Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419 Query: 543 EK 548 +K Sbjct: 420 KK 421
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 233 bits (595), Expect = 2e-61 Identities = 106/182 (58%), Positives = 150/182 (82%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DAI T R+D+ + Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 K+ +FQ+ T++M L+D+V L+D + D +S ADI AIC EAG+ A+R+ R + +DF Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419 Query: 543 EK 548 +K Sbjct: 420 KK 421
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 230 bits (587), Expect = 2e-60 Identities = 104/182 (57%), Positives = 149/182 (81%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+ P+I+FIDE+DAI T R+D+ + Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNS 299 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 K+ +FQ+ T++M L+D+V L++ + D +S ADI AIC EAG+ A+R+ R + +DF Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419 Query: 543 EK 548 +K Sbjct: 420 KK 421
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 229 bits (585), Expect = 4e-60 Identities = 106/182 (58%), Positives = 149/182 (81%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A E +P+I+FIDE+DA+ T R+DA + Sbjct: 248 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHS 307 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + Sbjct: 308 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 367 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 +R +FQ+ T+KM L+D+V+LE++V D+ S ADI AIC EAG+ A+R+ R + DF Sbjct: 368 TRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 427 Query: 543 EK 548 +K Sbjct: 428 KK 429
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 229 bits (585), Expect = 4e-60 Identities = 107/197 (54%), Positives = 153/197 (77%), Gaps = 5/197 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DA+ T R+D+ + Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNS 298 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + Sbjct: 299 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 358 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 KR +F + T++M L+++V+L + + D +S ADI AIC EAG+ A+R+ R + +DF Sbjct: 359 TKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 418 Query: 543 EKG-----YRTNVKKPE 578 +K YR PE Sbjct: 419 KKSKESVLYRKKEGTPE 435
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 216 bits (549), Expect = 5e-56 Identities = 100/182 (54%), Positives = 143/182 (78%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+R+VGSE +QKYLG+GPR+ R +F++A ENAP+I+FIDE+DAI T R+D+ + Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +RE+QR ++ELLNQ+DGFD +VKVIMATN+ +TLDPAL+RPGR+DRKI F PD Sbjct: 297 GGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLS 356 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 K+ + + T+KMNLS++V+LE V+ D +S ADI A+C EAG+ A+R+ R + +DF Sbjct: 357 TKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 416 Query: 543 EK 548 ++ Sbjct: 417 KQ 418
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 210 bits (535), Expect = 2e-54 Identities = 104/195 (53%), Positives = 147/195 (75%), Gaps = 1/195 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A F+RVVGSE +QKYLG+GPR+VR +F A+E++P+I+FIDE+DAI T R+DAQ+ Sbjct: 246 ANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQS 305 Query: 183 GADREVQRILMELLNQMDGFDQTV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 GA+RE+QR ++ELLNQ+DGFD + ++KVIMATNR LDPAL+RPGR+DRKI F PD Sbjct: 306 GAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDE 365 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 KR +F + T+KMNL ++V+LE+ + D +S A+I AI EAG+ A+R+ R ++ D Sbjct: 366 ATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDD 425 Query: 540 FEKGYRTNVKKPESD 584 F + R V K + + Sbjct: 426 FRQA-REKVLKTKDE 439
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 204 bits (518), Expect = 2e-52 Identities = 106/190 (55%), Positives = 135/190 (71%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRVVGSEFVQKY+GEG R+VR+VF+LAKE AP+IIFIDE+DAIA R ++ T Sbjct: 196 ANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT 255 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR +M+LL ++DGFD +VKVI ATNR D LDPA+LRPGR DR IE PLP Sbjct: 256 SGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFE 315 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T KM L+++VD ++ + S ADI AIC EAGM A+R+ R + DF Sbjct: 316 GRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375 Query: 543 EKGYRTNVKK 572 K +KK Sbjct: 376 TKAIEKVLKK 385
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 202 bits (513), Expect = 8e-52 Identities = 102/190 (53%), Positives = 135/190 (71%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A FIRVVGSE V+K++GEG +V+D+F+LAKE AP+IIFIDE+DAIA R DA T Sbjct: 225 ATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALT 284 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G DREVQR LM+LL +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE P PD + Sbjct: 285 GGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEK 344 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ T KMNL+++V+LE+ + A++ AIC EAGM+A+R+ R + DF Sbjct: 345 GRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404 Query: 543 EKGYRTNVKK 572 K ++K Sbjct: 405 RKAVEKIMEK 414
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 201 bits (510), Expect = 2e-51 Identities = 95/181 (52%), Positives = 134/181 (74%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R ++ + Sbjct: 203 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 262 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P+ Sbjct: 263 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEE 322 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 323 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 382 Query: 543 E 545 E Sbjct: 383 E 383
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 201 bits (510), Expect = 2e-51 Identities = 95/181 (52%), Positives = 134/181 (74%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R ++ + Sbjct: 200 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 259 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P+ Sbjct: 260 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEE 319 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 320 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 379 Query: 543 E 545 E Sbjct: 380 E 380
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 200 bits (509), Expect = 2e-51 Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 1/194 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R D+ Sbjct: 200 AHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSG 259 Query: 183 GA-DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G+ D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P Sbjct: 260 GSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSA 319 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + ++ + MNL+ +DL+ + + S A++ +C EAGM A+R+ R + +D Sbjct: 320 EARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQED 379 Query: 540 FEKGYRTNVKKPES 581 FE + K +S Sbjct: 380 FELAVAKVLNKGDS 393
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 200 bits (508), Expect = 3e-51 Identities = 94/181 (51%), Positives = 132/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV G+E VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I + R + Sbjct: 203 AHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSG 262 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ + N+K+IMATNR D LDPALLRPGR+DRKIEFP P Sbjct: 263 GGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVA 322 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L + + S AD+ +C EAGM+A+R+ R + +DF Sbjct: 323 ARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDF 382 Query: 543 E 545 E Sbjct: 383 E 383
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 197 bits (502), Expect = 1e-50 Identities = 96/180 (53%), Positives = 125/180 (69%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD Sbjct: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T MN ++ E + ADI ++C EAGM+A+R R + KDF Sbjct: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 197 bits (502), Expect = 1e-50 Identities = 96/180 (53%), Positives = 125/180 (69%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD Sbjct: 222 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 281 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD Sbjct: 282 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 341 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T MN ++ E + ADI ++C EAGM+A+R R + KDF Sbjct: 342 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 401
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 197 bits (501), Expect = 2e-50 Identities = 94/181 (51%), Positives = 132/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + + Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383 Query: 543 E 545 E Sbjct: 384 E 384
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 197 bits (501), Expect = 2e-50 Identities = 94/181 (51%), Positives = 132/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + + Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383 Query: 543 E 545 E Sbjct: 384 E 384
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 197 bits (501), Expect = 2e-50 Identities = 94/181 (51%), Positives = 132/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + + Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383 Query: 543 E 545 E Sbjct: 384 E 384
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 197 bits (501), Expect = 2e-50 Identities = 94/181 (51%), Positives = 132/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + + Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383 Query: 543 E 545 E Sbjct: 384 E 384
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 197 bits (501), Expect = 2e-50 Identities = 94/181 (51%), Positives = 132/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + + Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383 Query: 543 E 545 E Sbjct: 384 E 384
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 197 bits (500), Expect = 3e-50 Identities = 96/180 (53%), Positives = 125/180 (69%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD Sbjct: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T MN ++ E + ADI ++C EAGM+A+R R + KDF Sbjct: 343 GRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 197 bits (500), Expect = 3e-50 Identities = 96/180 (53%), Positives = 125/180 (69%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD Sbjct: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T MN ++ E + ADI ++C EAGM+A+R R + KDF Sbjct: 343 GRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 196 bits (499), Expect = 3e-50 Identities = 97/191 (50%), Positives = 139/191 (72%), Gaps = 1/191 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R ++ + Sbjct: 186 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGS 245 Query: 183 GA-DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G D EVQR ++ELLNQ+DGF+ T N+KV+M TNR D LDPALLRPGR+DRKIEFP P Sbjct: 246 GGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGD 305 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + ++ + KMNL+ ++L+ + + S A++ A+C EAGM+A+R+ R + +D Sbjct: 306 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQED 365 Query: 540 FEKGYRTNVKK 572 FE +KK Sbjct: 366 FEMAVSKVMKK 376
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 195 bits (496), Expect = 7e-50 Identities = 102/198 (51%), Positives = 132/198 (66%), Gaps = 1/198 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+H A FIR+ E VQK++GEG R+VR++F LA+E AP+IIFIDE+DAI R T Sbjct: 234 ANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDAT 293 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR L +LL +MDGFD ++KVI ATNR D LDPALLRPGR DR I+ PLPD Sbjct: 294 SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEE 353 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T MNL+++VDL+ + S ADI AIC EAGM A+R++R ++ DF Sbjct: 354 GRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDF 413 Query: 543 EKGY-RTNVKKPESDFDF 593 K R KK E +F Sbjct: 414 LKAVDRVMGKKEEESGEF 431
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 195 bits (495), Expect = 1e-49 Identities = 98/180 (54%), Positives = 126/180 (70%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AH T A FI++V SEFV+KY+GEG R+VR VF LAKE +P+IIFIDE+DA+A R + T Sbjct: 206 AHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSST 265 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR LM+LL ++DGF+ NV ++ ATNR D LDPALLRPGR DR IE PLP+ Sbjct: 266 SGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNED 325 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 +R + ++ T+ M L++EVD+E D S AD+ AIC EAGM A+R R + DF Sbjct: 326 GRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 195 bits (495), Expect = 1e-49 Identities = 93/198 (46%), Positives = 133/198 (67%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ Sbjct: 231 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 290 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P Sbjct: 291 SGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEE 350 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN++ +V+ E+ D + A + A+C EAGM A+R++ + +DF Sbjct: 351 ARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 410 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K +S ++Y Sbjct: 411 NEGIIQVQAKKKSSLNYY 428
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 194 bits (494), Expect = 1e-49 Identities = 100/197 (50%), Positives = 136/197 (69%), Gaps = 1/197 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A+F+RVVGSE V+K++GEG ++VRDVF+LAKE +P IIFIDE+DA+A+ R ++ T Sbjct: 203 AYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLT 262 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G DREVQR LM+LL +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE +PD Sbjct: 263 GGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDED 322 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ T KMNL VDL + + + AD+ A+C EAGM A+R+ R I DF Sbjct: 323 GRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDF 381 Query: 543 EKGY-RTNVKKPESDFD 590 + + KK + +D Sbjct: 382 REAISKITGKKEKCSYD 398
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 194 bits (493), Expect = 2e-49 Identities = 100/201 (49%), Positives = 139/201 (69%), Gaps = 2/201 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA-Q 179 AHHT FIRV GSE VQKY+GEG +MVR++F +A+E+AP+IIF+DE+D+I + R + + Sbjct: 211 AHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGK 270 Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G D EVQR ++ELLNQ+DGF+ T N+K+IMATNR D LDPALLRPGR+DRKIEFP P+ Sbjct: 271 GGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNE 330 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + ++ + +MNL+ ++L S S A+I A C EAGM A+R+ R + +D Sbjct: 331 LARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQED 390 Query: 540 FEKGYRTNVKK-PESDFDFYK 599 E +K+ ES+ F K Sbjct: 391 LEMAVAKVMKRGDESNMSFKK 411
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 193 bits (490), Expect = 4e-49 Identities = 92/198 (46%), Positives = 133/198 (67%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ Sbjct: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P Sbjct: 285 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN++ +V+ E+ D + A + A+C EAGM A+R++ + +DF Sbjct: 345 ARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 404 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K ++ ++Y Sbjct: 405 NEGIIQVQAKKKASLNYY 422
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 193 bits (490), Expect = 4e-49 Identities = 93/198 (46%), Positives = 132/198 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F+LAKE AP IIFIDE+DAI T RFD++ Sbjct: 226 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEV 285 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P Sbjct: 286 SGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 345 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN+ +V+ E+ D + A + A+C EAGM A+R++ + +DF Sbjct: 346 ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 405 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K ++ ++Y Sbjct: 406 NEGIIQVQAKKKASLNYY 423
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 192 bits (488), Expect = 6e-49 Identities = 94/198 (47%), Positives = 132/198 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ Sbjct: 241 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 300 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEFP+P+ Sbjct: 301 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 360 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN+S +V+ E+ D + A A+C EAGM A+R+ + +D+ Sbjct: 361 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K +++ +Y Sbjct: 421 MEGILEVQAKKKANLQYY 438
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 192 bits (488), Expect = 6e-49 Identities = 94/198 (47%), Positives = 132/198 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ Sbjct: 241 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 300 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEFP+P+ Sbjct: 301 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 360 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN+S +V+ E+ D + A A+C EAGM A+R+ + +D+ Sbjct: 361 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K +++ +Y Sbjct: 421 MEGILEVQAKKKANLQYY 438
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 192 bits (488), Expect = 6e-49 Identities = 94/181 (51%), Positives = 131/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I + R + + Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGS 257 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KMNL+ ++L S A++ +C EAGM+A+R+ R + +DF Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377 Query: 543 E 545 E Sbjct: 378 E 378
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 191 bits (486), Expect = 1e-48 Identities = 91/180 (50%), Positives = 129/180 (71%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AH T A FIRVVGSE VQKY+G+G ++VR++F +A++ AP+IIFIDE+D+IA R + T Sbjct: 214 AHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETT 273 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQR LM+LL +MDGFD+ N+++I ATNR D LDPA+LRPGR DR + P+P Sbjct: 274 GADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIE 333 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ KM L+ ++D + + +S AD+ AI EAGM AVRK++ ++ +DF Sbjct: 334 ARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDF 393
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 191 bits (485), Expect = 1e-48 Identities = 96/192 (50%), Positives = 129/192 (67%), Gaps = 2/192 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F++VV S V KY+GE RM+R++F A+++ P I+F+DE+DAI RF T ADRE+Q Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQ 271 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R LMELLNQ+DGFD VKVIMATNR DTLDPALLRPGRLDRKIE LP+ + + + + Sbjct: 272 RTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILK 331 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRT- 560 + + K+ E+D E V D SAAD+ +C EAGM A+R R ++ +DF K R Sbjct: 332 IHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391 Query: 561 -NVKKPESDFDF 593 + K+ E+ D+ Sbjct: 392 GDAKRLETKLDY 403
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 191 bits (485), Expect = 1e-48 Identities = 103/182 (56%), Positives = 122/182 (67%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+H A FIRVVGSE V+K++GEG R+V ++F LAKE AP IIFIDE+DAI R D T Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 252 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +REV R LM+LL +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD + Sbjct: 253 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQ 312 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V T KMNL VDL + S AD+ AI EAGM A+R R + DF Sbjct: 313 GRLEILKVHTRKMNLKG-VDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDF 371 Query: 543 EK 548 K Sbjct: 372 LK 373
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 191 bits (485), Expect = 1e-48 Identities = 95/189 (50%), Positives = 126/189 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ +IF DE+DAI ARFD Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ M++ ++ E + A+I ++C EAGM A+R R V KDF Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 409 Query: 543 EKGYRTNVK 569 + +K Sbjct: 410 LEAVNKVIK 418
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 191 bits (484), Expect = 2e-48 Identities = 94/189 (49%), Positives = 126/189 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ +IF DE+DAI ARFD Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ M++ ++ E + A+I ++C EAGM A+R R + KDF Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408 Query: 543 EKGYRTNVK 569 + +K Sbjct: 409 LEAVNKVIK 417
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 191 bits (484), Expect = 2e-48 Identities = 94/189 (49%), Positives = 126/189 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ +IF DE+DAI ARFD Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ M++ ++ E + A+I ++C EAGM A+R R + KDF Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408 Query: 543 EKGYRTNVK 569 + +K Sbjct: 409 LEAVNKVIK 417
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 191 bits (484), Expect = 2e-48 Identities = 102/182 (56%), Positives = 121/182 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AH A FIRVVGSE V+KY+GEG R+V ++F LAKE AP IIFIDE+DAI R D T Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +REV R LM+LL +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD Sbjct: 255 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFE 314 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V T +M L VDL + S AD+ AI EAGM A+R+ R + +DF Sbjct: 315 GRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373 Query: 543 EK 548 K Sbjct: 374 LK 375
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 191 bits (484), Expect = 2e-48 Identities = 93/198 (46%), Positives = 132/198 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI RFD++ Sbjct: 206 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEK 265 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEFP+P+ Sbjct: 266 AGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 325 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN+S +V+ E+ D + A A+C EAG+ A+R+ + +D+ Sbjct: 326 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDY 385 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K +++ +Y Sbjct: 386 MEGILEVQAKKKANLQYY 403
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 190 bits (483), Expect = 2e-48 Identities = 102/182 (56%), Positives = 122/182 (67%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AH A FIRVVGSE V+KY+GEG R+V ++F LAKE AP IIFIDE+DAI R D T Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +REV R LM+LL +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD Sbjct: 255 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFE 314 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V T +M L + VDL + S AD+ AI EAGM A+R+ R + +DF Sbjct: 315 GRLEILKVHTRRMKLKN-VDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373 Query: 543 EK 548 K Sbjct: 374 LK 375
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 190 bits (483), Expect = 2e-48 Identities = 89/180 (49%), Positives = 130/180 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AH T A FIRVVGSE VQKY+G+G ++VR++F +A++ AP+IIFIDE+D+IA R + T Sbjct: 214 AHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETT 273 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GADREVQR LM+LL +MDGFD+ N+++I ATNR D LDPA+LRPGR DR + P+P Sbjct: 274 GADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIE 333 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ KM L++++D + + +S AD+ AI EAGM AVR+++ ++ ++F Sbjct: 334 ARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEF 393
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 190 bits (483), Expect = 2e-48 Identities = 94/198 (47%), Positives = 131/198 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ Sbjct: 244 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 303 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEFP+P+ Sbjct: 304 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 363 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN+S +V+ E+ D + A A+C EAGM A+R+ + +D Sbjct: 364 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDH 423 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K +++ +Y Sbjct: 424 MEGILEVQAKKKANLQYY 441
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 190 bits (483), Expect = 2e-48 Identities = 92/198 (46%), Positives = 132/198 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F LAKE +P IIFIDE+DAI T RFD++ Sbjct: 221 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEV 280 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P Sbjct: 281 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 340 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KMN++ +V+ E+ D + A + A+C EAGM A+R++ + +DF Sbjct: 341 ARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 400 Query: 543 EKGYRTNVKKPESDFDFY 596 +G K ++ ++Y Sbjct: 401 NEGIIQVQAKKKASLNYY 418
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 189 bits (480), Expect = 5e-48 Identities = 102/182 (56%), Positives = 121/182 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 AH A FIRVVGSE V+KY+GEG R+V ++F LAKE AP IIFIDE+DAI R D T Sbjct: 192 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETT 251 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +REV R LM+LL +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD Sbjct: 252 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFE 311 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V T +M L VDL + S AD+ AI EAGM A+R+ R + +DF Sbjct: 312 GRLEILKVHTRRMKLRG-VDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 370 Query: 543 EK 548 K Sbjct: 371 LK 372
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 188 bits (477), Expect = 1e-47 Identities = 93/189 (49%), Positives = 125/189 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FI V+GSE VQKY+GEG RMVR++F +A+ +IF DE+DAI ARFD Sbjct: 229 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ M++ ++ E + A+I ++C EAGM A+R R + KDF Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408 Query: 543 EKGYRTNVK 569 + +K Sbjct: 409 LEAVNKVIK 417
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 186 bits (473), Expect = 3e-47 Identities = 92/189 (48%), Positives = 126/189 (66%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ +IF DE+DA+ ARFD Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD Sbjct: 292 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLA 351 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ +M++ ++ + + A+I ++C EAGM A+R R V KDF Sbjct: 352 GRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 411 Query: 543 EKGYRTNVK 569 + VK Sbjct: 412 LEAINKVVK 420
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 186 bits (472), Expect = 4e-47 Identities = 92/198 (46%), Positives = 125/198 (63%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ + VQ Y+GEG ++VRD F LAKE AP IIFIDE+DAI T RFD++ Sbjct: 236 AAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK 295 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF VKV+ ATNR D LDPALLR GRLDRKIEFPLP Sbjct: 296 SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSED 355 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q+ + KM D+++ ++ D+ + A + A+ EAGM A+R + + +DF Sbjct: 356 SRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDF 415 Query: 543 EKGYRTNVKKPESDFDFY 596 +G + FY Sbjct: 416 VEGISEVQARKSKSVSFY 433
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 185 bits (469), Expect = 1e-46 Identities = 95/182 (52%), Positives = 124/182 (68%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A FIRVVGSE V K++GEG R+VR++FRLA+E AP+I+FIDE+DAIA+ R D T Sbjct: 194 AGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT 253 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR +++LL ++DGFD NVKVI ATNR D +DPA+LRPGR DR IE PLP R Sbjct: 254 SGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLR 313 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + + T K ++ +VDLE + S AD+ A+ EAG +A+R+ VI D Sbjct: 314 GRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDM 373 Query: 543 EK 548 K Sbjct: 374 IK 375
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 184 bits (466), Expect = 2e-46 Identities = 86/181 (47%), Positives = 131/181 (72%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A+FI++ GSE V K++GEG ++VRD+F++A+++ PA++FIDE+DAIA+ R D++T Sbjct: 204 ASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKT 263 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 D EVQR +M+LL++MDGFD+ ++++I ATNR D LD A+LRPGR DR IE P P+ Sbjct: 264 SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVG 323 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ T MN++D VD + + +S AD+ AIC EAGM A+R +R + +DF Sbjct: 324 GREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDF 383 Query: 543 E 545 + Sbjct: 384 Q 384
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 182 bits (463), Expect = 5e-46 Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 2/192 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F++VV S V KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+Q Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R LMELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + + Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557 + + E+D E V D + AD+ +C EAGM A+R + ++ +DF K R Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374 Query: 558 TNVKKPESDFDF 593 + KK ES D+ Sbjct: 375 ADSKKLESKLDY 386
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 182 bits (463), Expect = 5e-46 Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 2/192 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F++VV S V KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+Q Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R LMELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + + Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557 + + E+D E V D + AD+ +C EAGM A+R + ++ +DF K R Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374 Query: 558 TNVKKPESDFDF 593 + KK ES D+ Sbjct: 375 ADSKKLESKLDY 386
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 182 bits (463), Expect = 5e-46 Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 2/192 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F++VV S V KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+Q Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R LMELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + + Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557 + + E+D E V D + AD+ +C EAGM A+R + ++ +DF K R Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374 Query: 558 TNVKKPESDFDF 593 + KK ES D+ Sbjct: 375 ADSKKLESKLDY 386
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 182 bits (461), Expect = 8e-46 Identities = 100/196 (51%), Positives = 122/196 (62%), Gaps = 2/196 (1%) Frame = +3 Query: 18 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197 A FI S V KY+GE R++R++F AKE+ P IIF+DEVDAI RF T ADRE Sbjct: 241 ANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADRE 300 Query: 198 VQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377 +QR LMELL QMDGFD K+IMATNR DTLDPALLRPGRLDRK+E PLP+ + + Sbjct: 301 IQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEI 360 Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR 557 F++ TAK+ + E D E V D + ADI EAG A+R +R I P D K R Sbjct: 361 FKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVR 420 Query: 558 --TNVKKPESDFDFYK 599 VKK E ++ K Sbjct: 421 KVAEVKKLEGTIEYQK 436
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 181 bits (460), Expect = 1e-45 Identities = 90/182 (49%), Positives = 122/182 (67%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ IIF DE+DA+ ARFD Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 323 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+ Q+DGFD N+KV+ ATNR +TLDPALLRPGR+DRK+EF LPD Sbjct: 324 GGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLE 383 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F++ + M++ + E + A++ ++C EAGM A+R R V KDF Sbjct: 384 GRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDF 443 Query: 543 EK 548 K Sbjct: 444 LK 445
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 181 bits (459), Expect = 1e-45 Identities = 86/194 (44%), Positives = 133/194 (68%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A+FI++ GSE V+K++GEG R+VRD+F LA++ PAIIFIDE+DA+A R D++T Sbjct: 207 ANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT 266 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 D EVQR +M+LL++MDGFD+ ++++I ATNR D LD A+LRPGR DR IE P P+ Sbjct: 267 SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPD 326 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ +MN++D VD D + + S A + ++ EAGM A+R +R + +DF Sbjct: 327 ARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDF 386 Query: 543 EKGYRTNVKKPESD 584 + Y V + +++ Sbjct: 387 DDAYEKLVAEGDTE 400
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 179 bits (455), Expect = 4e-45 Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 2/194 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F++VV S V KY+GE R++R++F AKE+ P +IF+DE+DAI RF T ADRE+Q Sbjct: 194 FLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQ 253 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R LMELLNQMDGFD K+IMATNR DTLDPALLRPGRLDRKIE PLP+ + + + Sbjct: 254 RTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILK 313 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557 + K++ E+D E V D + AD+ + EAG A++++R ++ D R Sbjct: 314 IHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKV 373 Query: 558 TNVKKPESDFDFYK 599 ++KK E D+ K Sbjct: 374 ADLKKLEGTIDYQK 387
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 179 bits (453), Expect = 7e-45 Identities = 88/183 (48%), Positives = 125/183 (68%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A F+++ + VQ ++G+G ++VRD F LAKE +PAIIFIDE+DAI T RFD++ Sbjct: 240 AAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEK 299 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF VKVI ATNR DTLDPALLR GRLDRK+EFPLP+ Sbjct: 300 AGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEE 359 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + KM + D+++ E+ D+ + A + ++C EAGM A+R+ I + F Sbjct: 360 ARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHF 419 Query: 543 EKG 551 G Sbjct: 420 MDG 422
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 179 bits (453), Expect = 7e-45 Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 1/191 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A FI VV SEF QK++GEG R+VR++F +AK AP+IIFIDE+DAI R D T Sbjct: 189 ATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT 248 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +RE+QR LM+LL ++DGFD NVK+I ATNR D LDPALLRPGR DR IE PLPD + Sbjct: 249 SGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFK 308 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F + KM + D ++LE + S ADI +C EA A+R R + D Sbjct: 309 GRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDL 368 Query: 543 -EKGYRTNVKK 572 E + NVK+ Sbjct: 369 VEAINKINVKR 379
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 176 bits (447), Expect = 4e-44 Identities = 89/189 (47%), Positives = 121/189 (64%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ IIF DE+DAI ARFD Sbjct: 234 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGA 293 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G D EVQR ++EL+ Q+DGFD N+KV+ ATNR +TLD AL+RPGR+DRK+EF LPD Sbjct: 294 GGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLE 353 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ M + ++ E + A++ ++C EAGM A+R R V KDF Sbjct: 354 GRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDF 413 Query: 543 EKGYRTNVK 569 + VK Sbjct: 414 LDAVQKVVK 422
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 176 bits (447), Expect = 4e-44 Identities = 88/170 (51%), Positives = 117/170 (68%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ Sbjct: 225 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 284 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 DREVQR ++ELLNQ+DGF + VKVI ATNR D LDPALLR GRLDRKIEFP+P+ Sbjct: 285 AGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 344 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + + Q+ + KMN+S +V+ E+ P A EAGM A+R+ Sbjct: 345 ARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALRR 394
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 169 bits (428), Expect = 6e-42 Identities = 85/172 (49%), Positives = 113/172 (65%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A FI+VV SEF QK++GEG R+VR+VF LA+ AP+I+FIDE+DAI R D T Sbjct: 189 ATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT 248 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +RE+QR LM+LL ++DGF NVK+I ATNR D LDPALLRPGR DR IE PLP+ Sbjct: 249 SGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFE 308 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 ++ +F++ KM + + S + S A+I +C EAG A+R R Sbjct: 309 GRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGR 360
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 147 bits (371), Expect = 2e-35 Identities = 75/170 (44%), Positives = 111/170 (65%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + KY GE + +R++F AKENAP+IIFIDE+D+IA R + Sbjct: 237 ANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG 296 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R R++ +LL MDG + +V VI ATNR D +DPAL RPGR DR+IE +PD+ Sbjct: 297 EVER---RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKE 353 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ + ++ T KM L+++VDLE+ + AD+ A+C+EA MHA+R+ Sbjct: 354 GRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRR 403 Score = 141 bits (356), Expect = 1e-33 Identities = 70/170 (41%), Positives = 112/170 (65%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + A FI V G E + K++GE + VR++FR A++ AP +IF DE+D++A R Sbjct: 510 ANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR--GGI 567 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G +R++ +LL ++DG ++ +V VI ATNR D +DPALLRPGRL+R I P PD++ Sbjct: 568 GDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKK 627 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + +F++ L+D+V++E+ + + S ADI A+C+EAGM A+R+ Sbjct: 628 ARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRE 677
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 146 bits (368), Expect = 5e-35 Identities = 74/171 (43%), Positives = 116/171 (67%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + A FI V G E K++GE + +R++FR A+++AP IIF DE+DAIA R + Sbjct: 507 ANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLS 566 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A + +++ +LL ++DG ++ +V VI ATNR D +DPALLRPGRLDR I P+PD + Sbjct: 567 SAVTD--KVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEK 624 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + +F++ T MNL+++V+LE+ + + + ADI A+C+EA M AVR++ Sbjct: 625 ARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRES 675 Score = 132 bits (331), Expect = 1e-30 Identities = 80/201 (39%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A F + G E + KY+GE +R +F A+ENAP+IIFIDE+DAIA R +A Sbjct: 234 ANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATG 293 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R R++ +LL MDG V VI ATNR + LDPAL RPGR DR+I +PDR Sbjct: 294 EVER---RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDRE 350 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILP--- 533 ++ + Q+ T M L+++VDL+ AD+ A+C+EA M A+R+ +LP Sbjct: 351 GRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRR----VLPSID 406 Query: 534 ---KDFEKGYRTNVKKPESDF 587 ++ K N+K DF Sbjct: 407 LEAEEIPKEVLDNLKVTMDDF 427
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 144 bits (363), Expect = 2e-34 Identities = 78/196 (39%), Positives = 109/196 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI V G E + + GE VR++F A+++AP ++F DE+D+IAT R + Sbjct: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSG 595 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A R+L +LL +MDG + V +I ATNR D +DPALLRPGRLD+ I PLPD Sbjct: 596 DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDED 655 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F+ C K LS ++DL S AD+T ICQ A +A+R+N + KD Sbjct: 656 SRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIREN----IEKDI 711 Query: 543 EKGYRTNVKKPESDFD 590 E+ R D D Sbjct: 712 EREKRRQENPDSMDED 727 Score = 115 bits (289), Expect = 7e-26 Identities = 68/175 (38%), Positives = 98/175 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAP+IIFIDE+D+IA R Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+ +PD Sbjct: 323 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + V + T M L++EVDLE AD+ A+C EA + +R+ V+ Sbjct: 380 GRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVL 434
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 140 bits (353), Expect = 3e-33 Identities = 77/193 (39%), Positives = 112/193 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VR++F A+++AP ++F DE+D+IAT R ++ Sbjct: 536 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVG 595 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A R+L +LL +MDG + V +I ATNR D +DPALLRPGRLD+ I PLPD Sbjct: 596 DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 655 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F+ C K ++ +VDL S ADIT ICQ + +A+R+N + KD Sbjct: 656 SRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN----IEKDI 711 Query: 543 EKGYRTNVKKPES 581 EK R + PE+ Sbjct: 712 EK-ERKRAESPEA 723 Score = 116 bits (291), Expect = 4e-26 Identities = 68/175 (38%), Positives = 99/175 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAP+IIFIDE+D+IA R Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+ +PD Sbjct: 323 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 379 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + V ++ T M L+++VDLE AD+ A+C EA + +R+ VI Sbjct: 380 GRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVI 434
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 140 bits (352), Expect = 4e-33 Identities = 78/193 (40%), Positives = 110/193 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI V G E + + GE VR++F A+++AP ++F DE+D+IAT R + Sbjct: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG 595 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A R+L +LL +MDG V +I ATNR D +DPALLRPGRLD+ I PLPD Sbjct: 596 DAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDED 655 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F+ C K ++ VDL S ADIT ICQ A +A+R+N + KD Sbjct: 656 SRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIREN----IEKDI 711 Query: 543 EKGYRTNVKKPES 581 E+ R + + PE+ Sbjct: 712 ER-ERKSRENPEA 723 Score = 121 bits (303), Expect = 2e-27 Identities = 71/175 (40%), Positives = 99/175 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAP+IIFIDE+D+IA R Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG +V VI ATNR +++DPAL R GR DR+I+ +PD Sbjct: 323 EVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + V ++ T M LSD+VDLE AD+ A+C EA + +R+ VI Sbjct: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 136 bits (342), Expect = 5e-32 Identities = 72/182 (39%), Positives = 109/182 (59%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + F R+ GS+F++ ++G G VRD+F+ A+E AP IIFIDE+DAI +R +A Sbjct: 195 AGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIGKSRLNAIH 254 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 D E ++ L +LL +MDGFD T + ++ ATNR D LDPALLRPGR DR++ PD + Sbjct: 255 SND-EREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLK 313 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + ++ + L+ EVDL+ S AD+ + EA + AVR R ++ D Sbjct: 314 GREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDL 373 Query: 543 EK 548 ++ Sbjct: 374 DE 375
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 135 bits (341), Expect = 7e-32 Identities = 79/205 (38%), Positives = 110/205 (53%), Gaps = 13/205 (6%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A FI V GSEF++ ++G GP VRD+F LA++NAP I+FIDE+DA+ R Sbjct: 361 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 420 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G E + L +LL +MDGF+ T NV ++ TNR D LDPALLRPGR DR+I PD + Sbjct: 421 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 480 Query: 363 QKRLVFQVCTAKMNLSDEVDLE----DYVSRPDKISAADITAICQEAGMHAVRKNRYVIL 530 + +F+V + L ++ + S S AD+ +C EA + A R I Sbjct: 481 GRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAIN 540 Query: 531 PKDFEKGY---------RTNVKKPE 578 K FE+ +T V +PE Sbjct: 541 EKHFEQAIERVIGGLEKKTQVLQPE 565
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 135 bits (340), Expect = 9e-32 Identities = 71/171 (41%), Positives = 105/171 (61%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A FI + G E + K++GE + +R++F+ AK+ APAI+F+DE+D+IA R T Sbjct: 522 ATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR--GTT 579 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +RI+ +LL +DG + V VI ATNR D +DPALLR GR D+ I P PD+ Sbjct: 580 SDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKE 639 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + +V T M L+ +VDL D R + AD+ +C+EAGM+A R+N Sbjct: 640 ARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYREN 690 Score = 120 bits (301), Expect = 3e-27 Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 5/175 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + A F+ + G E + KY G+ + +R++F A+E AP+IIFIDE+D+IA R + Q Sbjct: 245 ANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG 304 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R R++ +LL MDG + +V VI ATNR D +DPAL RPGR DR+IE +PDR Sbjct: 305 EVER---RVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRN 361 Query: 363 QKRLVFQVCTAKMNLSDEVD-----LEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ + + T M L + LE+ AD+ A+ +E+ M+A+R+ Sbjct: 362 GRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRR 416
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 135 bits (339), Expect = 1e-31 Identities = 76/193 (39%), Positives = 111/193 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI V G E + + GE VR++F A+++AP ++F DE+D+IAT R ++ Sbjct: 535 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAG 594 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A R+L +LL +MDG + V +I ATNR D +D ALLRPGRLD+ I PLPD Sbjct: 595 DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 654 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + +F+ C K ++ +VD+ S ADIT ICQ A +A+R+N + KD Sbjct: 655 SRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIREN----IEKDI 710 Query: 543 EKGYRTNVKKPES 581 E R + + PE+ Sbjct: 711 ENERRRS-QNPEA 722 Score = 116 bits (291), Expect = 4e-26 Identities = 68/175 (38%), Positives = 99/175 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAP+IIFIDE+D+IA R Sbjct: 262 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG 321 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+ +PD Sbjct: 322 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + V ++ T M L+++VDLE AD+ A+C EA + +R+ VI Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 135 bits (339), Expect = 1e-31 Identities = 79/205 (38%), Positives = 110/205 (53%), Gaps = 13/205 (6%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A FI V GSEF++ ++G GP VRD+F LA++NAP I+FIDE+DA+ R Sbjct: 362 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 421 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G E + L +LL +MDGF+ T NV ++ TNR D LDPALLRPGR DR+I PD + Sbjct: 422 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 481 Query: 363 QKRLVFQVCTAKMNLSDEVDLE----DYVSRPDKISAADITAICQEAGMHAVRKNRYVIL 530 + +F+V + L ++ + S S AD+ +C EA + A R I Sbjct: 482 GRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 541 Query: 531 PKDFEKGY---------RTNVKKPE 578 K FE+ +T V +PE Sbjct: 542 QKHFEQAIERVIGGLEKKTQVLQPE 566
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 134 bits (338), Expect = 2e-31 Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADR-EV 200 FI V GS+FV+ ++G G VRD+F AK++AP IIFIDE+DA+ AR G E Sbjct: 216 FISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDER 275 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 ++ L +LL +MDGFD + + VI ATNR D LDPALLRPGR DR+I P PD R + + Sbjct: 276 EQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEIL 335 Query: 381 QVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 +V L+ +VDLE + AD+ + EA + A RK + I ++ E+ Sbjct: 336 KVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEE 391
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 134 bits (336), Expect = 3e-31 Identities = 73/174 (41%), Positives = 101/174 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F +++ AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGFD + +I ATNR D LDPALLRPGR DR+I LPD R + + Q Sbjct: 273 QTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQ 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545 V K+ L + VD S AD+ + EA + A R NR V++ DFE Sbjct: 333 VHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFE 386
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 133 bits (335), Expect = 3e-31 Identities = 72/170 (42%), Positives = 106/170 (62%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI V G E + K+ GE + +R++F+ A+ENAP+IIFIDE+DAIA R D Sbjct: 267 ANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG 326 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 ++ R++ +LL MDG V VI ATNR D +DPAL RPGR DR+IE PD + Sbjct: 327 EVEK---RVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ + QV T M ++D+VDL+ + AD+ A+ +EA ++A+R+ Sbjct: 384 GRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRR 433 Score = 126 bits (316), Expect = 6e-29 Identities = 69/170 (40%), Positives = 105/170 (61%), Gaps = 1/170 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR-FDAQ 179 A + A FI V G E + K++GE + +R++FR A++ AP +IF DE+D+IA R Sbjct: 542 ATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTD 601 Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +G +RI+ +LL +MDG V +I ATNR D LDPALLRPGR DR I P PD+ Sbjct: 602 SGV---TERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDK 658 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 + + +V T + L+++V LED + + + AD+ A+ +EA ++A+R Sbjct: 659 TARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 133 bits (334), Expect = 5e-31 Identities = 68/165 (41%), Positives = 97/165 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GSEFV+ ++G G VRD+F+ AK+NAP I+FIDE+DA+ R G + E + Sbjct: 234 FFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDERE 293 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ V VI ATNRAD LD ALLRPGR DR++ +PD R + + + Sbjct: 294 QTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILE 353 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 V + +V LE R S AD+ + EA + R+ + Sbjct: 354 VHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRK 398
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 132 bits (333), Expect = 6e-31 Identities = 70/170 (41%), Positives = 104/170 (61%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T+A+F + G E + KY GE + +R++F AK+++P+IIFIDE+D+IA R D Sbjct: 244 ANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG 303 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R R++ +LL MDG + V VI ATNR D +DPAL RPGR DR+IE +PD Sbjct: 304 EVER---RVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEI 360 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + + ++ T M LSD+V+L ADI ++ +EA M A+R+ Sbjct: 361 GREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRR 410 Score = 119 bits (299), Expect = 5e-27 Identities = 61/169 (36%), Positives = 99/169 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A FI V G + + K++GE + +R FR A++ AP +IF DE+D++A R QT Sbjct: 517 ANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGR--GQT 574 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + +R++ +LL ++DG ++ V VI ATNR D +DPAL+R GR DR ++ P Sbjct: 575 GGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIE 634 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 + + ++ T L+ +V L + R D +D+ I +EA + A+R Sbjct: 635 GREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALR 683
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 132 bits (332), Expect = 8e-31 Identities = 73/175 (41%), Positives = 103/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F A+++AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGFD V +I ATNR D LDPALLRPGR DR++ LPD R ++ + + Sbjct: 273 QTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V K+ LS++VD S AD+ + EA + A R N V+ FEK Sbjct: 333 VHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEK 387
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 132 bits (331), Expect = 1e-30 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 3/181 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F+ V G E KY+GE R +R++FR A+ AP+IIF DE+DA++ R + T A Sbjct: 578 FLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA---AN 634 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 +L LLN++DG ++ V ++ ATNR D +D ALLRPGRLDR I PD + + + Sbjct: 635 HVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK 694 Query: 384 VCTAKMNLSDE-VDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYV--ILPKDFEKGY 554 CT K N + VDL + R + S A++ +CQEAG+ A+ ++ V + + FEK + Sbjct: 695 KCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAF 754 Query: 555 R 557 + Sbjct: 755 K 755 Score = 103 bits (257), Expect = 4e-22 Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 5/175 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + A + + G V KYLGE +RD+F A++ P+IIFIDE+D+IA R + + Sbjct: 300 ANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDS 359 Query: 183 GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G EV+ R++ LL MDG V VI ATNR +++DPAL RPGR D+++E +PD Sbjct: 360 G---EVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDV 416 Query: 360 RQKRLV----FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + + F ++ ++ D ++ S+ AD+TA+C+E+ M +++ Sbjct: 417 DARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 131 bits (330), Expect = 1e-30 Identities = 71/181 (39%), Positives = 104/181 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + F + GSEFV+ ++G G VRD+F+ AK+NAP ++FIDE+DA+ R Sbjct: 208 AGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIG 267 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + E ++ L +LL +MDGF+ V VI ATNR D LD ALLRPGR DR+I +PD + Sbjct: 268 GGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVK 327 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V + L +V LE R + AD+ + EA + AVR+ I K+ Sbjct: 328 SRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEI 387 Query: 543 E 545 + Sbjct: 388 D 388
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 131 bits (330), Expect = 1e-30 Identities = 73/181 (40%), Positives = 103/181 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A +A F + GSEFV+ ++G G VRD+F+ AKE AP I+FIDE+DA+ R Sbjct: 225 AGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIG 284 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + E ++ L +LL +MDGF V V+ ATNR D LD ALLRPGR DR+I LP+ Sbjct: 285 GGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNIN 344 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V + K + +V LE R S AD+ + EA + VR+ + I K+ Sbjct: 345 GRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEI 404 Query: 543 E 545 E Sbjct: 405 E 405
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 131 bits (329), Expect = 2e-30 Identities = 70/175 (40%), Positives = 102/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+ AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGF+ + VI ATNR D LDPALLRPGR DR++ LPD R + + + Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V ++ L+ ++D S AD+ + EA + A R N+ V+ +FEK Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 131 bits (329), Expect = 2e-30 Identities = 70/175 (40%), Positives = 102/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+ AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGF+ + VI ATNR D LDPALLRPGR DR++ LPD R + + + Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V ++ L+ ++D S AD+ + EA + A R N+ V+ +FEK Sbjct: 333 VHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 131 bits (329), Expect = 2e-30 Identities = 70/175 (40%), Positives = 102/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+ AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGF+ + VI ATNR D LDPALLRPGR DR++ LPD R + + + Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V ++ L+ ++D S AD+ + EA + A R N+ V+ +FEK Sbjct: 333 VHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 131 bits (329), Expect = 2e-30 Identities = 71/169 (42%), Positives = 98/169 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ F V GSEFV+ ++G G VRD+F+ A ENAP I+FIDE+DA+ R Sbjct: 240 ANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVG 299 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + E ++ L +LL +MDGF + V V+ ATNRAD LD ALLRPGR DR++ LPDR Sbjct: 300 GGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRL 359 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 + + +V L ++V L +R S AD+ + EA + A R Sbjct: 360 GRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATR 408
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 131 bits (329), Expect = 2e-30 Identities = 70/175 (40%), Positives = 102/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+ AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGF+ + VI ATNR D LDPALLRPGR DR++ LPD R + + + Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V ++ L+ ++D S AD+ + EA + A R N+ V+ +FEK Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 131 bits (329), Expect = 2e-30 Identities = 70/175 (40%), Positives = 102/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+ AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGF+ + VI ATNR D LDPALLRPGR DR++ LPD R + + + Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V ++ L+ ++D S AD+ + EA + A R N+ V+ +FEK Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 130 bits (327), Expect = 3e-30 Identities = 71/175 (40%), Positives = 101/175 (57%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+NAP +IFIDE+DA+ R G E + Sbjct: 222 FFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDERE 281 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF + +I ATNRAD LDPALLRPGR DR+I PD + V + Sbjct: 282 QTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLK 341 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V L + V+L+ R S AD+ + EA + A R+N+ I +D ++ Sbjct: 342 VHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDE 396
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 130 bits (327), Expect = 3e-30 Identities = 69/175 (39%), Positives = 101/175 (57%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+NAP +IFIDE+DA+ R G E + Sbjct: 212 FFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDERE 271 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGF V VI ATNR D LDPAL RPGR DR++ LPD + + + + Sbjct: 272 QTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILK 331 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V K++++ +VD S AD+ + EA + A R N+ + +FEK Sbjct: 332 VHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 386
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 130 bits (327), Expect = 3e-30 Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 1/177 (0%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+ AP+IIFIDE+DA+ R G + E + Sbjct: 254 FYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDERE 313 Query: 204 RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 + L +LL +MDGF N V VI ATNR+D LDPALLRPGR DRK+ PD + + V Sbjct: 314 QTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVL 373 Query: 381 QVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKG 551 +V L+ +VDL + ++ AD+ + EA + A R+N+ I D ++G Sbjct: 374 KVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEG 430
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 130 bits (326), Expect = 4e-30 Identities = 66/164 (40%), Positives = 96/164 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GSEFV+ ++G G VRD+F AK NAP I+FIDE+DA+ R G + E + Sbjct: 222 FFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDERE 281 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ + ++ ATNR D LD AL+RPGR DR++ PD +R + Sbjct: 282 QTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILN 341 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 V LS +VDL+ R + AD++ + EA + A R+N Sbjct: 342 VHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRN 385
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 130 bits (326), Expect = 4e-30 Identities = 70/162 (43%), Positives = 97/162 (59%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+NAP IIFIDE+DA+ R G E + Sbjct: 227 FFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDERE 286 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF + +I ATNRAD LDPALLRPGR DR+I+ PD + V + Sbjct: 287 QTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLK 346 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 V L+D+V+L+ +R S AD+ + EA + A R Sbjct: 347 VHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAAR 388
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 130 bits (326), Expect = 4e-30 Identities = 69/168 (41%), Positives = 99/168 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+N+P IIF+DE+DA+ R G E + Sbjct: 224 FFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDERE 283 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF V +I ATNR D LDPALLRPGR DR+I PD +R V + Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 V + ++D+ DL+ R ++ AD+ + EA + R+N VI Sbjct: 344 VHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVI 391
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 129 bits (325), Expect = 5e-30 Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 1/194 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI V G E + + GE VR++F A+++AP ++F DE+D+IAT R Sbjct: 535 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSG 594 Query: 183 G-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G R+L +LL +MDG + V +I ATNR D +D ALLRPGRLD+ I PLPD Sbjct: 595 GDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE 654 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + +F+ K ++ +VD+ S ADIT ICQ A +A+R+N + KD Sbjct: 655 DSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN----IEKD 710 Query: 540 FEKGYRTNVKKPES 581 EK R + + PE+ Sbjct: 711 IEKEKRRS-ENPEA 723 Score = 116 bits (291), Expect = 4e-26 Identities = 68/175 (38%), Positives = 99/175 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAP+IIFIDE+D+IA R Sbjct: 262 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG 321 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+ +PD Sbjct: 322 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + V ++ T M L+++VDLE AD+ A+C EA + +R+ VI Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 129 bits (325), Expect = 5e-30 Identities = 73/175 (41%), Positives = 102/175 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAPAIIFIDE+DAIA R Sbjct: 259 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 318 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD Sbjct: 319 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + Q+ T M LSD+VDLE + AD+ A+C EA + A+RK +I Sbjct: 376 GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430 Score = 121 bits (304), Expect = 1e-27 Identities = 63/171 (36%), Positives = 98/171 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VR++F A++ AP ++F DE+D+IA AR Sbjct: 532 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 591 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I PLPD + Sbjct: 592 DGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 651 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + + K ++ +VD++ + S AD+T ICQ A A+R++ Sbjct: 652 SRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRES 702
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 129 bits (324), Expect = 7e-30 Identities = 69/175 (39%), Positives = 104/175 (59%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VR +F AK+ APAIIFIDE+DA+ R G + E + Sbjct: 248 FFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDERE 307 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ + VI ATNR+D LDPALLRPGR DRK+ PD + + + + Sbjct: 308 QTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILK 367 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V L+++VDL+ + AD+ + EA + A R+N+ +I D ++ Sbjct: 368 VHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDE 422
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 129 bits (324), Expect = 7e-30 Identities = 69/175 (39%), Positives = 104/175 (59%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VR +F AK+ APAIIFIDE+DA+ R G + E + Sbjct: 248 FFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDERE 307 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ + VI ATNR+D LDPALLRPGR DRK+ PD + + + + Sbjct: 308 QTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILK 367 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V L+++VDL+ + AD+ + EA + A R+N+ +I D ++ Sbjct: 368 VHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDE 422
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 129 bits (323), Expect = 9e-30 Identities = 66/168 (39%), Positives = 96/168 (57%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GSEFV+ ++G G VRD+F+ AKENAP ++FIDE+DA+ R G + E + Sbjct: 272 FFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDERE 331 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ + VI ATNR D LD ALLRPGR DR++ PD + + L+ Sbjct: 332 QTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILA 391 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + L +EV L R + AD+ + EA + R+ + I Sbjct: 392 IHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAI 439
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 129 bits (323), Expect = 9e-30 Identities = 65/168 (38%), Positives = 97/168 (57%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GSEFV+ ++G G VRD+F+ AKENAP +IFIDE+DA+ R G + E + Sbjct: 233 FFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDERE 292 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ + +I ATNR D LD AL+RPGR DR++ PD ++ + + Sbjct: 293 QTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILE 352 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 V L+ EV ++ R S AD+ + EA + R+ + I Sbjct: 353 VHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 129 bits (323), Expect = 9e-30 Identities = 71/175 (40%), Positives = 99/175 (56%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS F +G G + VRD+F AK+ AP IIFIDE+D++ + R + + V+ Sbjct: 289 FFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVE 348 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF V V+ ATNR D LD ALLRPGR DR I+ LPD +++ + Q Sbjct: 349 QTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQ 408 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V NLS ++ L D R S A + + EA + AVR NR I D ++ Sbjct: 409 VHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDE 463
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 128 bits (322), Expect = 1e-29 Identities = 72/175 (41%), Positives = 102/175 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAPAIIFIDE+DAIA R Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + Q+ T M L+D+VDLE + AD+ A+C EA + A+RK +I Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429 Score = 125 bits (313), Expect = 1e-28 Identities = 68/194 (35%), Positives = 107/194 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VR++F A++ AP ++F DE+D+IA AR Sbjct: 531 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I PLPD + Sbjct: 591 DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + + K ++ +VDLE + S AD+T ICQ A A+R++ + ++ Sbjct: 651 SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710 Query: 543 EKGYRTNVKKPESD 584 E+ + + E D Sbjct: 711 ERQTNPSAMEVEED 724
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 128 bits (322), Expect = 1e-29 Identities = 72/175 (41%), Positives = 102/175 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAPAIIFIDE+DAIA R Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + Q+ T M L+D+VDLE + AD+ A+C EA + A+RK +I Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429 Score = 125 bits (313), Expect = 1e-28 Identities = 68/194 (35%), Positives = 107/194 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VR++F A++ AP ++F DE+D+IA AR Sbjct: 531 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I PLPD + Sbjct: 591 DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + + K ++ +VDLE + S AD+T ICQ A A+R++ + ++ Sbjct: 651 SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710 Query: 543 EKGYRTNVKKPESD 584 E+ + + E D Sbjct: 711 ERQTNPSAMEVEED 724
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 128 bits (322), Expect = 1e-29 Identities = 72/175 (41%), Positives = 102/175 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAPAIIFIDE+DAIA R Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + Q+ T M L+D+VDLE + AD+ A+C EA + A+RK +I Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429 Score = 125 bits (313), Expect = 1e-28 Identities = 68/194 (35%), Positives = 107/194 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VR++F A++ AP ++F DE+D+IA AR Sbjct: 531 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I PLPD + Sbjct: 591 DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + + K ++ +VDLE + S AD+T ICQ A A+R++ + ++ Sbjct: 651 SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710 Query: 543 EKGYRTNVKKPESD 584 E+ + + E D Sbjct: 711 ERQTNPSAMEVEED 724
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 128 bits (322), Expect = 1e-29 Identities = 72/175 (41%), Positives = 102/175 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAPAIIFIDE+DAIA R Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + Q+ T M L+D+VDLE + AD+ A+C EA + A+RK +I Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429 Score = 125 bits (313), Expect = 1e-28 Identities = 68/194 (35%), Positives = 107/194 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VR++F A++ AP ++F DE+D+IA AR Sbjct: 531 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I PLPD + Sbjct: 591 DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + + K ++ +VDLE + S AD+T ICQ A A+R++ + ++ Sbjct: 651 SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710 Query: 543 EKGYRTNVKKPESD 584 E+ + + E D Sbjct: 711 ERQTNPSAMEVEED 724
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 128 bits (322), Expect = 1e-29 Identities = 69/175 (39%), Positives = 103/175 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F ++++AP IIFIDE+DA+ R G E + Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L ++L +MDGFD + +I ATNR D LDPALLRPGR DR++ LPD R + + + Sbjct: 273 QTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILK 332 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V K+ LS +VD S AD+ + EA + A R ++ V+ +FE+ Sbjct: 333 VHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFER 387
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 127 bits (320), Expect = 2e-29 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A FI V GSEF++ ++G GP VRD+F +A+++AP I+FIDE+DAI R Sbjct: 228 AGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHL 287 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G E + L ++L +MDGF+ + NV V+ TNR D LDPAL RPGR DR+I PD + Sbjct: 288 GGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIK 347 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSR-----PDKISAADITAICQEAGMHAVRKNRYVI 527 + +F+V + L + +D +SR + ADI+ +C EA + A R + Sbjct: 348 GRSSIFKVHLRPLKLDGSLS-KDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSV 406 Query: 528 LPKDFEK 548 + FE+ Sbjct: 407 QERHFEQ 413
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 127 bits (318), Expect = 3e-29 Identities = 69/171 (40%), Positives = 98/171 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VRDVF A+ AP ++F DE+D+IA AR + Sbjct: 537 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVG 596 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I PLPD Sbjct: 597 DAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEA 656 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + +F+ K LS ++DL S AD+T ICQ A A+R++ Sbjct: 657 SRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707 Score = 113 bits (282), Expect = 5e-25 Identities = 64/175 (36%), Positives = 98/175 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F ++N+PAI+FIDE+DAIA R A Sbjct: 264 ANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHG 323 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 ++ RI+ +LL MDG +V VI ATNR +++D AL R GR DR+I+ +PD Sbjct: 324 EVEK---RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + ++ T M L ++VDLE + AD+ ++C EA + +R+ +I Sbjct: 381 GRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELI 435
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 127 bits (318), Expect = 3e-29 Identities = 68/168 (40%), Positives = 98/168 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+N+P IIF+DE+DA+ R G E + Sbjct: 224 FFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDERE 283 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF V +I ATNR D LDPALLRPGR DR+I PD +R V + Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 V + ++ + DL+ R ++ AD+ + EA + R+N VI Sbjct: 344 VHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVI 391
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 127 bits (318), Expect = 3e-29 Identities = 68/168 (40%), Positives = 98/168 (58%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS+FV+ ++G G VRD+F AK+N+P IIF+DE+DA+ R G E + Sbjct: 224 FFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDERE 283 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF V +I ATNR D LDPALLRPGR DR+I PD +R V + Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 V + ++ + DL+ R ++ AD+ + EA + R+N VI Sbjct: 344 VHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVI 391
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 127 bits (318), Expect = 3e-29 Identities = 70/175 (40%), Positives = 99/175 (56%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GS F +G G + VRD+F AK+ AP IIFIDE+D++ + R + + V+ Sbjct: 292 FFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVE 351 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF V V+ ATNR D LD ALLRPGR DR I+ LPD +++ + + Sbjct: 352 QTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILK 411 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V NLS ++ L D R S A + + EA + AVR NR I D ++ Sbjct: 412 VHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDE 466
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 126 bits (317), Expect = 4e-29 Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 2/177 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFD-AQTGADREV 200 F + GSEFV+ ++G G VRD+F AK+ AP I+FIDE+DAI +R A G + E Sbjct: 235 FFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDER 294 Query: 201 QRILMELLNQMDGFDQT-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377 ++ L +LL +MDGF V V+ ATNR +TLDPALLRPGR DR++ PD + + Sbjct: 295 EQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKI 354 Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 ++ K+ L EV+L++ +R + AD+ + EA + A R + + DF + Sbjct: 355 LEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFRE 411
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 125 bits (315), Expect = 7e-29 Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 3/178 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQ-TGADREV 200 F V GSEFV+ ++G G VRD+F+ A+ENAP+I+FIDE+DAI AR +GA+ E Sbjct: 409 FYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDER 468 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 + L ++L +MDGF +V V+ TNR D LD ALLRPGR DR I P+ ++ +F Sbjct: 469 ENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIF 528 Query: 381 QVCTAKMNLSDEV-DLEDYVSR-PDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 V + L+ E+ DL++ ++ S ADI +C EA + A R + + FE+ Sbjct: 529 AVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQ 586
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 125 bits (314), Expect = 9e-29 Identities = 64/165 (38%), Positives = 94/165 (56%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GSEFV+ ++G G VRD+F+ AKEN+P I+FIDE+DA+ R G + E + Sbjct: 234 FFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDERE 293 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + L +LL +MDGF+ + +I ATNR D LD ALLRPGR DR++ +PD + + + Sbjct: 294 QTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILN 353 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 V L + LE R S AD+ + EA + R+ + Sbjct: 354 VHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRK 398
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 124 bits (310), Expect = 3e-28 Identities = 70/175 (40%), Positives = 100/175 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++NAPAIIFIDE+D+IA R Sbjct: 269 ANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNG 328 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R R++ +LL MDG NV VI ATNR +++DPAL R GR DR+++ +PD Sbjct: 329 EVER---RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + V ++ T M L+D+VDLE + ADI ++C EA M +R+ +I Sbjct: 386 GRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLI 440 Score = 115 bits (289), Expect = 7e-26 Identities = 64/169 (37%), Positives = 92/169 (54%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A +A FI V G E + + GE +RD+F A+ AP ++F+DE+D+IA AR + Sbjct: 542 ATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLG 601 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 A R++ +LL +MDG + NV VI ATNR D +DPA+LRPGRLD+ I PLPD Sbjct: 602 DAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEN 661 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 + + K L ++L S AD+ I Q A +A++ Sbjct: 662 ARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 121 bits (303), Expect = 2e-27 Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 1/172 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI + G E + + GE VRDVF A+ AP ++F DE+D+IA AR Sbjct: 538 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAG 597 Query: 183 G-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I PLPD Sbjct: 598 GDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDE 657 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + + K LS ++DL S AD+T ICQ A A+R++ Sbjct: 658 ASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709 Score = 112 bits (280), Expect = 8e-25 Identities = 64/175 (36%), Positives = 97/175 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T + F + G E + K GE +R F ++N PAI+FIDE+DAIA R Sbjct: 265 ANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG 324 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R RI+ +LL MDG N+ VI ATNR +++D AL R GR DR+I+ +PD Sbjct: 325 EVER---RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 381 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + ++ T M L+D+VDLE + AD+ ++C EA + +R+ +I Sbjct: 382 GRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELI 436
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 121 bits (303), Expect = 2e-27 Identities = 64/182 (35%), Positives = 104/182 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A F + S FV+ Y+G G + VR++F+ A++ APAIIFIDE+DA+ +R Sbjct: 266 AGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIG 325 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + E ++ L ++L +MDG ++ + ++ ATNR D LDPALLRPGR DR I LPD + Sbjct: 326 GGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIK 385 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 ++ + ++ + LS E+ + R S A + + EA + +VR+ VI+ Sbjct: 386 EREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQI 445 Query: 543 EK 548 ++ Sbjct: 446 DE 447
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 120 bits (301), Expect = 3e-27 Identities = 64/175 (36%), Positives = 102/175 (58%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A FI V G E + + GE VRD+F A+ +P IIF DE+D++A R ++ T Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 D R++ ++L ++DG ++ + +I ATNR D LD AL RPGRLD+ I LPD + Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + +F+ L+++VD+ D R + S ADIT +CQ A A+++ +++ Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLL 1161 Score = 114 bits (284), Expect = 3e-25 Identities = 60/171 (35%), Positives = 97/171 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + A + G E + K++GE + +R +F+ A E P IIFIDE+D+IA R + Sbjct: 582 ANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNN 641 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 ++ R++ +LL MDG + NV V+ ATNR +++DPAL R GR DR+IE P+PD + Sbjct: 642 ELEK---RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQ 698 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + T KM L +V+L AD+ +C EA + ++++ Sbjct: 699 GRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH 749
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 119 bits (299), Expect = 5e-27 Identities = 65/175 (37%), Positives = 100/175 (57%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ T A F + G E + K GE +R F A++N+PAIIFIDE+D+IA R Sbjct: 279 ANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 338 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 +R R++ +LL MDG NV V+ ATNR +++DPAL R GR DR+++ +PD Sbjct: 339 EVER---RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 + + ++ T M L+D+VDLE + +D+ ++C EA M +R+ +I Sbjct: 396 GRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450 Score = 117 bits (294), Expect = 2e-26 Identities = 68/183 (37%), Positives = 101/183 (55%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ +A FI V G E + + GE VRD+F A+ AP ++F+DE+D+IA AR A Sbjct: 552 ANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR-GASA 610 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G R++ +LL +MDG + NV VI ATNR D +DPAL+RPGRLD+ I PLPD Sbjct: 611 GDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEE 670 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + Q ++++VDL S AD+ + Q A A++ + + ++ Sbjct: 671 ARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKREN 730 Query: 543 EKG 551 E G Sbjct: 731 ETG 733
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 119 bits (298), Expect = 7e-27 Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 5/175 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + FI V G E + Y+GE R VR VF+ AK +AP +IF DEVDA+ R D +T Sbjct: 635 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 694 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ + LP Sbjct: 695 GAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 751 Query: 363 QKRLVFQVCT---AKMNLSDEVDLEDYVS--RPDKISAADITAICQEAGMHAVRK 512 + + + T K L ++V+LE + R + + AD+TA+ +EA + A+R+ Sbjct: 752 DRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQ 806 Score = 102 bits (253), Expect = 1e-21 Identities = 63/184 (34%), Positives = 94/184 (51%) Frame = +3 Query: 27 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQR 206 ++V E V GE + +R++F A NAP I+FIDE+DAI R A +R + Sbjct: 326 LKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVA 385 Query: 207 ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386 L+ ++ ++ T V VI ATNR D+LDPAL R GR DR++ +PD + + Q Sbjct: 386 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQT 445 Query: 387 CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 566 K+ L + + AD+ A+C+EA M AV NR ++ + +K Sbjct: 446 LCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKQQAQQK------ 497 Query: 567 KKPE 578 KKPE Sbjct: 498 KKPE 501
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 118 bits (296), Expect = 1e-26 Identities = 67/185 (36%), Positives = 95/185 (51%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F SEFV+ ++G G VRD+F AK AP I+FIDE+DA+ R G + E + Sbjct: 314 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDERE 373 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + Q Sbjct: 374 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQ 433 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563 V + L+ +VD E R + AD+ + EA + A R+ I + Sbjct: 434 VHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERI 493 Query: 564 VKKPE 578 + PE Sbjct: 494 IAGPE 498
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 117 bits (293), Expect = 3e-26 Identities = 66/185 (35%), Positives = 94/185 (50%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F SEFV+ ++G G VRD+F AK AP I+FIDE+DA+ R G + E + Sbjct: 323 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDERE 382 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + Q Sbjct: 383 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 442 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563 V + L +VD + R + AD+ + EA + A R+ I + Sbjct: 443 VHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERI 502 Query: 564 VKKPE 578 + PE Sbjct: 503 IAGPE 507
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 117 bits (292), Expect = 3e-26 Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 5/175 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + FI V G E + Y+GE R VR VF+ AK +AP +IF DEVDA+ R D +T Sbjct: 636 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 695 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ + LP Sbjct: 696 GAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 752 Query: 363 QKRLVFQVCT---AKMNLSDEVDLEDYVS--RPDKISAADITAICQEAGMHAVRK 512 + + + T K L +V+LE R D + AD++A+ +EA + A+R+ Sbjct: 753 DRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807 Score = 104 bits (259), Expect = 2e-22 Identities = 59/162 (36%), Positives = 83/162 (51%) Frame = +3 Query: 27 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQR 206 ++V E V GE + +R++F A NAP IIFIDE+DAI R A +R + Sbjct: 327 LKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVA 386 Query: 207 ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386 L+ ++ ++ T V VI ATNR D+LDPAL R GR DR+I +PD + + Q Sbjct: 387 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQT 446 Query: 387 CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 K+ L D AD+ A+C+EA M AV + Sbjct: 447 LCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 488
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 116 bits (291), Expect = 4e-26 Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 1/172 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A+F + +E Y+GEG ++R+ F+ A+ +P+IIF DE D +A R D + Sbjct: 341 ANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESS 400 Query: 183 GADREV-QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 V +R+L LL +MDG ++ + V+ ATNR +D AL+RPGR D + P PD Sbjct: 401 SNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDL 460 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + QV T M L D+VDL D + A++ +C+E+G ++R+N Sbjct: 461 EARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLREN 512 Score = 88.6 bits (218), Expect = 1e-17 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 6/168 (3%) Frame = +3 Query: 60 YLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARFDAQTGADREVQRILMELLN 227 + GE +++R+ F A +A P++IFIDE+D + R DA+ D + L L++ Sbjct: 96 HAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQDVRIASQLFTLMD 154 Query: 228 QMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL 407 V V+ +TNR D +DPAL R GR D +E P+ + + Q+ T K+NL Sbjct: 155 SNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNL 214 Query: 408 SDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK--NRYVILPKDFE 545 VDL+ + AD+ A+C+EA + A ++ + ++ +DF+ Sbjct: 215 DPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFK 262
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 116 bits (290), Expect = 6e-26 Identities = 66/174 (37%), Positives = 103/174 (59%), Gaps = 2/174 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF-DAQ 179 A + F + GS F++ ++G G VRD+F +AK+ AP+IIFIDE+DAI +R Sbjct: 230 AGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGM 289 Query: 180 TGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 356 + E ++ L +LL +MDGF + V V+ ATNR + LDPALLRPGR DR++ PD Sbjct: 290 ISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPD 349 Query: 357 RRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 + + + +V + L+++VDL++ ++ AD+ I EA + A R N+ Sbjct: 350 FKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQ 403
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 115 bits (289), Expect = 7e-26 Identities = 65/185 (35%), Positives = 94/185 (50%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F SEFV+ ++G G VRD+F AK AP I+FIDE+DA+ R G + E + Sbjct: 311 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDERE 370 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + + Sbjct: 371 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILK 430 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563 V + + +VD E R + AD+ + EA + A R+ I + Sbjct: 431 VHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERI 490 Query: 564 VKKPE 578 + PE Sbjct: 491 IAGPE 495
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 115 bits (289), Expect = 7e-26 Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 9/191 (4%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFD--A 176 A F+ V GSEFV+ ++G G VRD+F A+ AP+IIFIDE+DAI R A Sbjct: 342 AGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGA 401 Query: 177 QTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 356 GA+ E + L +LL +MDGF + V V+ TNR D LD AL+RPGR DR I+ PD Sbjct: 402 LGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPD 461 Query: 357 RRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKI-------SAADITAICQEAGMHAVRKN 515 ++ ++ V ++NL D + +D + K+ + ADI C EA + A R N Sbjct: 462 VNGRQQIYLVHLKRLNL-DPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHN 520 Query: 516 RYVILPKDFEK 548 I FE+ Sbjct: 521 DPYITIHHFEQ 531
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 115 bits (288), Expect = 1e-25 Identities = 65/185 (35%), Positives = 95/185 (51%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F SEFV+ ++G G VRD+F AK AP I+FIDE+DA+ R G + E + Sbjct: 314 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDERE 373 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + Q Sbjct: 374 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 433 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563 V + L+ +VD + R + D+ + EA + A R++ I + Sbjct: 434 VHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERI 493 Query: 564 VKKPE 578 + PE Sbjct: 494 IAGPE 498
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 114 bits (286), Expect = 2e-25 Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 3/177 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREV 200 F+ + G EFV+ G G VR +F+ A+ AP I++IDE+DA+ R +G ++ E Sbjct: 370 FLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEE 429 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 ++ L +LL +MDG T +V V+ +TNRAD LD AL+RPGRLDR + LP +++R +F Sbjct: 430 EQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIF 489 Query: 381 Q--VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545 + + + K+ S + S ADI IC EA +HA R+ + +FE Sbjct: 490 EQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFE 546
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 114 bits (286), Expect = 2e-25 Identities = 63/168 (37%), Positives = 95/168 (56%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + FI V G E + KY+G + VRD+F A+ P I+F DE ++IA R T Sbjct: 895 ARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNT 954 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G R++ +LL Q+DG + V V+ AT+R D +DPALLRPGRLD+ + P PD+ Sbjct: 955 GV---TDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQV 1011 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAV 506 + + V + + L+D+VDL+ S D + AD+ A+ A + A+ Sbjct: 1012 SRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 114 bits (284), Expect = 3e-25 Identities = 65/182 (35%), Positives = 94/182 (51%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A F + GS+FV+ ++G G VRD+F K NAP IIFIDE+DA+ R Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + E ++ L ++L +MDGF+ V +I ATNR D LD ALLRPGR DR+I PD Sbjct: 269 GGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDIN 328 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V K+ + V S A++ + EA + A R + + D Sbjct: 329 GREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDM 388 Query: 543 EK 548 E+ Sbjct: 389 EE 390
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 114 bits (284), Expect = 3e-25 Identities = 65/182 (35%), Positives = 94/182 (51%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A F + GS+FV+ ++G G VRD+F K NAP IIFIDE+DA+ R Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G + E ++ L ++L +MDGF+ V +I ATNR D LD ALLRPGR DR+I PD Sbjct: 269 GGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDIN 328 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V K+ + V S A++ + EA + A R + + D Sbjct: 329 GREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDM 388 Query: 543 EK 548 E+ Sbjct: 389 EE 390
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 113 bits (282), Expect = 5e-25 Identities = 64/185 (34%), Positives = 95/185 (51%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F SEFV+ ++G G VR +F AK AP I+FIDE+DA+ R G + E + Sbjct: 291 FFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDERE 350 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V V+ ATNR D LD ALLRPG+ DR++ PD + + Q Sbjct: 351 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQ 410 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563 V + L+ +VD + R + AD+ + EA + A R++ I + Sbjct: 411 VHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 470 Query: 564 VKKPE 578 + PE Sbjct: 471 IAGPE 475
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 112 bits (281), Expect = 6e-25 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 10/194 (5%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ + A FI + G E + KY+GE R +R VF A+ + P +IF DE+DA+ R T Sbjct: 588 ANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR---DT 644 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 R++ LL ++DG + + VI ATNR D +DPA+LRPGRLD+ + LP+ Sbjct: 645 SLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTE 704 Query: 363 QKRLVFQVCTAKMN--LSDEVDLEDYV--SRPDKISAADITAICQEAGMHAVRKNRY--- 521 +K + + T LS +VD E+ + + + S AD+ A+ +E+ + A+++ + Sbjct: 705 EKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSE 764 Query: 522 ---VILPKDFEKGY 554 +L D +K + Sbjct: 765 EIQSVLDNDLDKEF 778 Score = 81.3 bits (199), Expect = 2e-15 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + V GE + +RD+F A+ AP ++F DE+DAI R GA RE++ Sbjct: 267 FISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR---DGGAQREME 323 Query: 204 R-ILMELLNQMDGFDQTVN----VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 R I+ +LL MD V +I ATNR D+LD AL R GR DR+I +P+ + Sbjct: 324 RRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSR 383 Query: 369 RLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + + + + + +D AD+ A+ AG A+++ Sbjct: 384 LHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 111 bits (277), Expect = 2e-24 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 2/167 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF-DAQTGADREV 200 F + GS F++ ++G G VRD+F AK+ AP+IIFIDE+DAI +R + E Sbjct: 231 FFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDER 290 Query: 201 QRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377 ++ L +LL +MDGF + V V+ ATNR + LDPAL+RPGR DR++ PD + + Sbjct: 291 EQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEI 350 Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 +V + L+++V+L++ ++ AD+ I EA + A R N+ Sbjct: 351 LKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQ 397
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 110 bits (276), Expect = 2e-24 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 2/167 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF-DAQTGADREV 200 F + GS F++ ++G G VRD+F AK+ AP+IIFIDE+DAI +R + E Sbjct: 231 FFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDER 290 Query: 201 QRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377 ++ L +LL +MDGF + V V+ ATNR + LDPAL+RPGR DR++ PD + + Sbjct: 291 EQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEI 350 Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 +V + L+++V+L++ ++ AD+ I EA + A R N+ Sbjct: 351 LKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQ 397
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 107 bits (267), Expect = 3e-23 Identities = 63/174 (36%), Positives = 95/174 (54%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F + GSEF + Y+G G + +RD+F A+ APAIIFIDE+DAI R ++ Sbjct: 342 FFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYAKQT- 400 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 L +LL ++DGF QT + +I ATN + LD AL RPGR D+ + LPD R + + + Sbjct: 401 --LNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILK 458 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545 K+ L+D VD +S A++ + +A ++A +KN + FE Sbjct: 459 HHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFE 512
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 107 bits (266), Expect = 3e-23 Identities = 60/163 (36%), Positives = 88/163 (53%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + G E + KY+G + VR++F A+ P I+F DE D+IA R TG Sbjct: 861 FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV---TD 917 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R++ ++L QMDG + V V+ AT+R D +D ALLRPGRLD+ + +PD + + Q Sbjct: 918 RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQ 977 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 T MN+S V+L S AD+ A+ A + AV + Sbjct: 978 SVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHE 1020 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/139 (17%), Positives = 63/139 (45%), Gaps = 5/139 (3%) Frame = +3 Query: 90 DVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME-LLNQMDGFDQTVN--V 260 D+F AP+++ ++++D++ A Q +D R L E ++++ QT+N + Sbjct: 569 DIFSEVSWKAPSLLILEDLDSLIPAE---QEHSDSSQSRQLSEYFISKLSA--QTINRDI 623 Query: 261 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL--SDEVDLEDY 434 ++ ++ ++L+ + ++ + PD+ ++ + Q +N+ S+ L + Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683 Query: 435 VSRPDKISAADITAICQEA 491 + D+ +C A Sbjct: 684 AVETEGYLPKDLKVLCDRA 702
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 105 bits (263), Expect = 8e-23 Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + F+ V G E + Y+G+ VR+VF A+ AP IIF DE+D++A +R ++ Sbjct: 759 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 816 Query: 183 GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G V R++ +LL ++DG T +V VI ATNR D LDPALLRPGR D+ + + Sbjct: 817 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876 Query: 360 RQKRL-VFQVCTAKMNLSDEVDLEDYVS-RPDKISAADITAICQEAGMHAVRKNRYVILP 533 R +L V T K L V L + + P +++ AD+ ++C +A M A+++ Sbjct: 877 RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRR-----V 931 Query: 534 KDFEKG 551 +D E+G Sbjct: 932 RDLEEG 937
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 105 bits (262), Expect = 1e-22 Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + F+ V G E + Y+G+ VR+VF A+ AP IIF DE+D++A +R ++ Sbjct: 756 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 813 Query: 183 GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G V R++ +LL ++DG T +V VI ATNR D LDPALLRPGR D+ + + Sbjct: 814 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873 Query: 360 RQKRL-VFQVCTAKMNLSDEVDLEDYVS-RPDKISAADITAICQEAGMHAVRKNRYVILP 533 R +L V T K L V L + + P +++ AD+ ++C +A M A+++ Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRR-----V 928 Query: 534 KDFEKG 551 +D E+G Sbjct: 929 RDLEEG 934
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 105 bits (261), Expect = 1e-22 Identities = 60/164 (36%), Positives = 87/164 (53%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F GSEF + +G+G R VRD+F AK AP IIFIDE+D++ + R Sbjct: 262 FFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR--VSNSIHPYAN 319 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL++MDGF + + VI ATNR D LD ALLRPGR D ++ P PD + +F Sbjct: 320 QTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFN 379 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 +K+ S +D + + ADI + +A + A N Sbjct: 380 FYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDN 423
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 105 bits (261), Expect = 1e-22 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Frame = +3 Query: 21 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200 AF G++ + K++GE R +R +F A + PAIIF DE+D +A R Q D+ Sbjct: 147 AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRSSRQ---DQIH 203 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 I+ LL MDG D + VI ATNR D++DPAL RPGR DR+ F LPD+ ++ + Sbjct: 204 SSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEIL 263 Query: 381 QVCTAKMNLSD-EVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ T N ++ LE+ ADI +IC EA + A+R+ Sbjct: 264 KIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRR 308
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 104 bits (260), Expect = 2e-22 Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + F+ V G E + Y+G+ VR+VF A+ AP IIF DE+D++A +R ++ Sbjct: 758 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 815 Query: 183 GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G V R++ +LL ++DG T +V VI ATNR D LDPALLRPGR D+ + + Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875 Query: 360 RQKRL-VFQVCTAKMNLSDEVDLEDYVS-RPDKISAADITAICQEAGMHAVRKNRYVILP 533 R +L V T K L V L + + P +++ AD+ ++C +A M A K R L Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDA-MTAALKRRVHDLE 934 Query: 534 KDFEKG 551 + E G Sbjct: 935 EGLEPG 940
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 104 bits (260), Expect = 2e-22 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 1/178 (0%) Frame = +3 Query: 39 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME 218 G++ + K++GE R +R +F AK++ P+IIF DE+D +A R Q + L+ Sbjct: 485 GADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLA 544 Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAK 398 L MDG D V VI ATNR D +DPAL RPGR DR+ FPLPD + + + Q+ T K Sbjct: 545 L---MDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRK 601 Query: 399 MNLSDEVDLEDYVSRPDK-ISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 569 + + D ++ K AD+ ++C EA + +++++ F + YR+N K Sbjct: 602 WSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRS--------FPQIYRSNDK 651
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 104 bits (259), Expect = 2e-22 Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 8/198 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V + KY GE ++VR +F +A+ AP+ IFIDE+D+I + R TG++ E Sbjct: 295 FFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKR---GTGSEHEAS 351 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG + + V V+ ATN +D AL R RL+++I PLP+ Sbjct: 352 RRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEI 409 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + ++ ++ L+D++DL+ + D S ADIT +C++A M A+R+ + P++ Sbjct: 410 DGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRPEE 469 Query: 540 FEKGYRTNVKKPESDFDF 593 + + +P + DF Sbjct: 470 IRHIPKEELNQPSTPADF 487
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 103 bits (257), Expect = 4e-22 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 1/165 (0%) Frame = +3 Query: 21 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200 AF G++ + K++GE R +R +F A + P+IIF DE+D +A R Q D+ Sbjct: 492 AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQ---DQIH 548 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 I+ LL MDG D + VI ATNR D++DPAL RPGR DR+ F LPD+ ++ + Sbjct: 549 SSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEIL 608 Query: 381 QVCTAKMNLSD-EVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ T N + LE+ ADI +IC EA + A+R+ Sbjct: 609 KIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRR 653
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 103 bits (257), Expect = 4e-22 Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 1/171 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ A F+ + G+E + KY+GE +R +F+ A+ AP +IF DEVDA+ T+R + Sbjct: 583 ANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSR--GKE 640 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 GA V+R+L + L ++DG ++ NV VI ATNR D +DPA LRPGR + PLP+ Sbjct: 641 GA-WVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNAD 698 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYV-SRPDKISAADITAICQEAGMHAVRK 512 ++ + + K + VDL+ + + S AD+ + Q+A AV + Sbjct: 699 ERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEE 749 Score = 82.4 bits (202), Expect = 9e-16 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 10/180 (5%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A+ F ++ +E + G +R++F A AP+I+FIDE+DAI + R + Q Sbjct: 288 ANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQR 347 Query: 183 GADREVQRILMELLNQMDGFDQTVN----------VKVIMATNRADTLDPALLRPGRLDR 332 ++ RI+ +LL MDG + V VI ATNR D LDPAL R GR + Sbjct: 348 EMEK---RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFET 404 Query: 333 KIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +I PD + + V K+ L D + AD+ ++ AG A+++ Sbjct: 405 EIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKR 464
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 103 bits (256), Expect = 5e-22 Identities = 62/165 (37%), Positives = 90/165 (54%), Gaps = 1/165 (0%) Frame = +3 Query: 21 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200 AF G++ + K++GE R +R +F A + P+IIF DE+D +A R Q D+ Sbjct: 323 AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQ---DQIH 379 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 I+ LL MDG D + VI ATNR D +DPAL RPGR DR+ F LPD+ ++ + Sbjct: 380 SSIVSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEIL 439 Query: 381 QVCTAKMNLSD-EVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ T N + LE+ ADI +IC EA + A+R+ Sbjct: 440 KIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRR 484
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 102 bits (254), Expect = 9e-22 Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 2/169 (1%) Frame = +3 Query: 21 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200 AF G++ + K++GE R +R +F A P+IIF DE+D +A R Q D+ Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ---DQIH 513 Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R + Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573 Query: 381 QVCTAKMNLSDEV--DLEDYVSRPDKISAADITAICQEAGMHAVRKNRY 521 + T+K + + L+ R AD+ +C EA + +R +RY Sbjct: 574 DIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLR-SRY 621
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 101 bits (251), Expect = 2e-21 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 5/168 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194 F V G E + Y+GE VR VF+ A++ P ++F DE+D++A R D+ DR Sbjct: 1055 FFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDR 1114 Query: 195 EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 V ++L EL G D + V VI ATNR D LDPALLRPGR D+ + + D K+L Sbjct: 1115 IVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQL 1174 Query: 375 -VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + + T K L V L + P + AD A+C +A + AV + Sbjct: 1175 KILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTR 1222
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 101 bits (251), Expect = 2e-21 Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 3/166 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V G E + Y+GE VR VF+ A++ P +IF DEVD++A R + Q + + Sbjct: 779 FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGN-QGDSGGVMD 837 Query: 204 RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377 RI+ +LL ++DG + V +I ATNR D LD ALLRPGR D+ I + D R+K+ + Sbjct: 838 RIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANI 897 Query: 378 FQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + T K +S +++ ++ VS P + AD A+C +A + A+ + Sbjct: 898 MRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTR 943
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 100 bits (250), Expect = 2e-21 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V S KY GE ++VR +F +A+ +PA IFIDE+D+I + R T + E Sbjct: 270 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEAS 326 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 327 RRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 384 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L+D+VDL + S ADIT +C++A + A+R+ + P++ Sbjct: 385 KGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444 Query: 540 FEKGYRTNVKKPESDFDF 593 + + P + DF Sbjct: 445 IRNLSKEEMHMPTTMEDF 462
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 100 bits (250), Expect = 2e-21 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 8/198 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F + S KY GE ++VR +F +A+ AP IFIDE+D+I + R T + E Sbjct: 267 FFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEAS 323 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 324 RRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 381 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L+D+V++E D S ADIT +C++A + A+R+ + P++ Sbjct: 382 KGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEE 441 Query: 540 FEKGYRTNVKKPESDFDF 593 R ++ P + DF Sbjct: 442 IRNLSRDDMHMPTTMEDF 459
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 100 bits (248), Expect = 4e-21 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V S KY GE ++VR +F +A+ +PA IFIDE+D+I + R T + E Sbjct: 270 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEAS 326 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 327 RRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 384 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L+D+V+L + S ADIT +C++A + A+R+ + P++ Sbjct: 385 KGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444 Query: 540 FEKGYRTNVKKPESDFDF 593 R + P + DF Sbjct: 445 IRNLSREEMHMPTTMEDF 462
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 99.8 bits (247), Expect = 6e-21 Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V G E + Y+GE VR VF+ A+E P +IF DE+D++A R + Q + + Sbjct: 793 FFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGN-QGDSGGVMD 851 Query: 204 RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377 RI+ +LL ++DG + V VI ATNR D LD ALLRPGR D+ + +PD K+L + Sbjct: 852 RIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNI 911 Query: 378 FQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + T K L ++V L + P + AD A+C +A ++A+ + Sbjct: 912 LEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSR 957 Score = 29.6 bits (65), Expect = 7.0 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 5/125 (4%) Frame = +3 Query: 117 APAIIFIDEVDAIATARFDAQTGADREV----QRILMELLNQMDGFD-QTVNVKVIMATN 281 +PA+IF+ +D+I D D E + I E+ +D F + + + N Sbjct: 541 SPAVIFLAHLDSIL---LDVNANQDPEAIKLQKSINFEMSKLLDDFTFKFPGTTFVGSVN 597 Query: 282 RADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISA 461 D + + R + I P+P Q+ +FQ + L+ +V + VS D IS Sbjct: 598 NIDNVPSSFRSHMRFE--ILVPVPSEAQRLRIFQWYLSSHELNRDVQQKVPVSYMDNISF 655 Query: 462 ADITA 476 + +++ Sbjct: 656 SSLSS 660
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 98.6 bits (244), Expect = 1e-20 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V S KY GE ++VR +F +A+ +PA IFIDE+D+I + R T + E Sbjct: 270 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEAS 326 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 327 RRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 384 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L+D+V+L + S ADIT +C++A + A+R+ + P++ Sbjct: 385 KGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444 Query: 540 FEKGYRTNVKKPESDFDF 593 R + P + DF Sbjct: 445 IRNLSREAMHMPTTMEDF 462
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 97.8 bits (242), Expect = 2e-20 Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 5/190 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194 F V G E + Y+GE VR VF+ A++ P ++F DE+D++A R D++ DR Sbjct: 880 FFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGNQGDSEGVMDR 939 Query: 195 EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR- 371 V ++L EL + M G D V V+ ATNR D LD ALLRPGR D+ + + D +K+ Sbjct: 940 IVSQLLAEL-DGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQS 998 Query: 372 LVFQVCTAKMNLSDEVDLEDYV-SRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548 + + + K +L VDL+ S P + AD A+C +A ++A+ + I EK Sbjct: 999 KIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTR----IANTVDEK 1054 Query: 549 GYRTNVKKPE 578 R N + PE Sbjct: 1055 IKRYNEELPE 1064
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 97.8 bits (242), Expect = 2e-20 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V S KY GE ++VR +F +A+ AP IFIDE+D+I + R T + E Sbjct: 269 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEAS 325 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 326 RRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 383 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L ++ LED + + S ADIT +C++A + A+R+ + P++ Sbjct: 384 KGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE 443 Query: 540 FEKGYRTNVKKPESDFDF 593 + ++ P + DF Sbjct: 444 IRALSKEELQMPVTKGDF 461
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 97.4 bits (241), Expect = 3e-20 Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 5/173 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194 F V G E + Y+GE VR VF+ A++ P ++F DE+D++A R D+ DR Sbjct: 1052 FFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDR 1111 Query: 195 EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 V ++L EL G V VI ATNR D LDPALLRPGR D+ + + D K++ Sbjct: 1112 IVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQV 1171 Query: 375 -VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRKNRYVI 527 + + T K L V L R P + AD A+C +A + AV + ++ Sbjct: 1172 TIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLV 1224
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 97.4 bits (241), Expect = 3e-20 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 4/167 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V G E + Y+GE VR VF+ A++ P ++F DE+D++A R + Q + + Sbjct: 780 FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQRGN-QGDSGGVMD 838 Query: 204 RILMELLNQMDGFDQT--VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK-RL 374 RI+ +LL ++DG V V+ ATNR D LD ALLRPGR D+ + + D +K + Sbjct: 839 RIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQT 898 Query: 375 VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + + T K L+ +V LE R P + AD A+C +A ++A+ + Sbjct: 899 IMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAMTR 945
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 97.1 bits (240), Expect = 4e-20 Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 8/171 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V + K+ GE RMVR +F LA+ AP+ IFIDE+D++ +R +G + Sbjct: 300 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR--GGSGEHESSR 357 Query: 204 RILMELLNQMDGFDQTVN--------VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 R+ ELL Q+DG T V V+ ATN +D AL R RL+++I PLPD Sbjct: 358 RVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDF 415 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 ++ + + + ++ +V++ED R + S D+T +C++A M+ +R+ Sbjct: 416 ESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRR 466
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 97.1 bits (240), Expect = 4e-20 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V S KY GE ++VR +F +A+ AP IFIDE+D+I + R T + E Sbjct: 267 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEAS 323 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 324 RRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 381 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L +V LED + + S ADIT IC++A + A+R+ + P++ Sbjct: 382 KGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEE 441 Query: 540 FEKGYRTNVKKP 575 + ++ P Sbjct: 442 IRALSKEELQMP 453
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 96.7 bits (239), Expect = 5e-20 Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V G E + Y+GE VR VF+ A++ P +IF DE+D++A R + Q + + Sbjct: 784 FFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGN-QGDSGGVMD 842 Query: 204 RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377 RI+ +LL ++DG + + VI ATNR D LD ALLRPGR D+ + + D +K+ + Sbjct: 843 RIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANI 902 Query: 378 FQVCTAKMNLSDEVDLEDY-VSRPDKISAADITAICQEAGMHAVRK 512 + T K L +V L+D S P + AD A+C +A ++A+ + Sbjct: 903 LRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAMTR 948
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 96.7 bits (239), Expect = 5e-20 Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 8/192 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200 F V S KY GE ++VR +F +A+ AP IFIDE+D+I + R T + E Sbjct: 267 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEAS 323 Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +R+ ELL QMDG D + V V+ ATN +D AL R RL+++I PLP Sbjct: 324 RRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 381 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539 + + + ++ ++ L ++ LED + + S ADIT IC++A + A+R+ + P++ Sbjct: 382 KGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEE 441 Query: 540 FEKGYRTNVKKP 575 + ++ P Sbjct: 442 IRALSKEELQMP 453
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 96.3 bits (238), Expect = 6e-20 Identities = 56/183 (30%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR-FDAQ 179 A T ++FI V E + +++G+ +M+R++++ A E+AP I+FIDE+DAI +R + + Sbjct: 175 ATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAIGLSREYQSL 234 Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 G +V ++ LL ++DG + V I ATN LDPA+ R + +IEF LP+ Sbjct: 235 RG---DVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPND 289 Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMH-AVRKNRYVILPK 536 ++ + ++ KM L + +L+++V + S DI + +H A+ ++R + + Sbjct: 290 EERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKE 349 Query: 537 DFE 545 D E Sbjct: 350 DLE 352
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 95.9 bits (237), Expect = 8e-20 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V G E + Y+GE VR VF+ A++ P +IF DE+D++A R + Q + + Sbjct: 763 FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGN-QGDSGGVMD 821 Query: 204 RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377 RI+ +LL ++DG + V VI ATNR D LD ALLRPGR D+ + + D +K+ + Sbjct: 822 RIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANI 881 Query: 378 FQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + T K L +D+ D + P + AD A+C +A ++A+ + Sbjct: 882 IKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAMTR 927
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 95.5 bits (236), Expect = 1e-19 Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 7/170 (4%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F V G E + Y+GE VR VF+ A++ P +IF DE+D++A R + Q + + Sbjct: 900 FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGN-QGDSGGVMD 958 Query: 204 RILMELLNQMDGFDQTV-----NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 RI+ +LL ++DG V V+ ATNR D LD ALLRPGR D+ + + D +K Sbjct: 959 RIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEK 1018 Query: 369 R-LVFQVCTAKMNLSDEVDLEDYVSRPD-KISAADITAICQEAGMHAVRK 512 + + + T K L+D VDL + R + AD A+C ++ ++A+ + Sbjct: 1019 QSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTR 1068
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 95.5 bits (236), Expect = 1e-19 Identities = 55/174 (31%), Positives = 91/174 (52%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F GSEF + ++G G +R++FR AK NAP +IFIDE+D++ R ++ + Sbjct: 400 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS--R 457 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V +I ATN + LD AL+RPGR D ++ P PD + + + + Sbjct: 458 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 517 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545 K+ VD E S A++ + +A + A + ++ K+ E Sbjct: 518 WYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 571
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 95.1 bits (235), Expect = 1e-19 Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 5/168 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR---FDAQTGADR 194 F V G E + Y+GE VR VF+ A++ P +IF DE+D++A R D+ DR Sbjct: 874 FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDR 933 Query: 195 EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 V ++L E L+ M G + V V+ ATNR D LD ALLRPGR D+ + + D +K+ Sbjct: 934 IVSQLLAE-LDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQA 992 Query: 375 -VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + Q T K L VDL P + AD A+C +A ++A+ + Sbjct: 993 KIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTR 1040
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 95.1 bits (235), Expect = 1e-19 Identities = 55/174 (31%), Positives = 91/174 (52%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F GSEF + ++G G +R++FR AK NAP +IFIDE+D++ R + + Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPMHPYS--R 399 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + +++LL +MDGF V +I ATN + LD AL+RPGR D ++ P PD + + + + Sbjct: 400 QTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 459 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545 K+ VD E S A++ + +A + A + ++ K+ E Sbjct: 460 WYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 95.1 bits (235), Expect = 1e-19 Identities = 55/174 (31%), Positives = 91/174 (52%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F GSEF + ++G G +R++FR AK NAP +IFIDE+D++ R ++ + Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS--R 399 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF V +I ATN + LD AL+RPGR D ++ P PD + + + + Sbjct: 400 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 459 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545 K+ VD E S A++ + +A + A + ++ K+ E Sbjct: 460 WYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 95.1 bits (235), Expect = 1e-19 Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 5/168 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194 F V G E + Y+GE VR VF+ A++ P ++F DE+D++A R D+ DR Sbjct: 1091 FFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDR 1150 Query: 195 EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD-RRQKR 371 V ++L EL G + + V VI ATNR D LD ALLRPGR D+ + + D R++ Sbjct: 1151 IVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQA 1210 Query: 372 LVFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + + T K L +V L+ + P + AD+ A+C +A + A+ + Sbjct: 1211 TILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 94.7 bits (234), Expect = 2e-19 Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 4/167 (2%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F+ + G E + Y+GE VR+VF A+ ++P +IF DE+D+IA R ++ + + + Sbjct: 716 FVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNS-SDSGNVMD 774 Query: 204 RILMELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRL 374 R++ +LL ++D + N V VI ATNR D LDP+LLRPGR D+ + + K Sbjct: 775 RVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKAS 834 Query: 375 VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512 + + T L + +DL + + AD+ A+C +A + A+++ Sbjct: 835 MLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR 881
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 93.6 bits (231), Expect = 4e-19 Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Frame = +3 Query: 18 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197 + F + S+ V K+LGE ++V+++F+LA+EN P+IIFIDE+D++ +R + ++ A R Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAAR- 252 Query: 198 VQRILMELLNQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 RI E L QM G + V+ ATN LD A+ R R +++I PLP+ + Sbjct: 253 --RIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAA 308 Query: 375 VFQV-CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +F++ + N E D ++ + D S ADI+ I ++A M VRK Sbjct: 309 MFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 93.6 bits (231), Expect = 4e-19 Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 9/172 (5%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI V G E + K++G + +R++F A+ P I+F DE D+IA R TG Sbjct: 759 FISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGV---TD 815 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 R++ +LL QMDG + V ++ AT+R D +D ALLRPGRLD+ + +P ++ + Q Sbjct: 816 RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQ 875 Query: 384 VCT---------AKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 K L DL+ + S AD+ +C A + +V + Sbjct: 876 AIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHR 927
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 92.8 bits (229), Expect = 7e-19 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 12/172 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAKE--------NAPAIIFIDEVDAIATARFDAQTGA 188 V G + + KY+GE VR +F A+E + II DE+DAI R + G+ Sbjct: 362 VNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQR-GSMAGS 420 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL++MDG +Q N+ VI TNR D +D ALLRPGRL+ ++E LPD + Sbjct: 421 SSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGR 480 Query: 369 RLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + ++ TA+M + VDLED R S A++ + + A A+ + Sbjct: 481 LQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNR 532
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 92.8 bits (229), Expect = 7e-19 Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 13/198 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGA 188 V G E + KY+G+ VR +F A+ E+ II DE+DAI R +G Sbjct: 336 VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGG 393 Query: 189 DREV-QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 365 D V +++ +LL +MDG DQ N+ VI TNR D +D ALLRPGRL+ +E LPD Sbjct: 394 DTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHG 453 Query: 366 KRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILP 533 + + ++ T++M L ++VD+E+ S S A+I + + A A ++ V Sbjct: 454 RLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTT 513 Query: 534 KDFEKGYRTNVKKPESDF 587 G N+K +DF Sbjct: 514 AAV-SGNLENIKVNRNDF 530
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 92.0 bits (227), Expect = 1e-18 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 12/197 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAKENAPA--------IIFIDEVDAIATARFDAQTGA 188 V G E + K++GE + VRD+F A+++ +I DE+DAI +R + G Sbjct: 282 VNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGT 341 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 I+ +LL ++DG + NV +I TNR D LD ALLRPGRL+ ++E LPD + Sbjct: 342 GVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGR 400 Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPK 536 + Q+ T KM L +++L++ +R S A++ + + A +A+ NR + + Sbjct: 401 LQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYAL--NRQLSMDD 458 Query: 537 DFEKGYRTNVKKPESDF 587 + N+K DF Sbjct: 459 LTKPVEEENIKITMEDF 475
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 92.0 bits (227), Expect = 1e-18 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 2/167 (1%) Frame = +3 Query: 18 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197 + F + S+ V K+LGE ++V+++F+LA+EN P+IIFIDE+D++ +R + ++ A R Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAAR- 252 Query: 198 VQRILMELLNQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 RI E L QM G + V+ ATN LD A+ R R +++I PLP+ + Sbjct: 253 --RIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAA 308 Query: 375 VFQV-CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +F++ N E D + + D S ADI+ I ++A M VRK Sbjct: 309 MFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 92.0 bits (227), Expect = 1e-18 Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 12/172 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGA 188 V G E + KY+G +R++F+ A+ E++ II DE+D++ R G Sbjct: 306 VNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGT 365 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL +MDG DQ N+ VI TNR D +D ALLRPGR + ++E LPD + + Sbjct: 366 GVG-DNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGR 424 Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +F + T KM +SD+V+L + + S A+I + + A A+ K Sbjct: 425 LQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINK 476
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 92.0 bits (227), Expect = 1e-18 Identities = 52/173 (30%), Positives = 94/173 (54%), Gaps = 12/173 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGA 188 V G E + KY+G +R++F+ A+ ++ +I DE+D++ R ++ Sbjct: 342 VNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDG 401 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL++MDG DQ N+ VI TNR D +D ALLRPGR + +IE LPD + + Sbjct: 402 TGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGR 461 Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + +F + T K+ LS +V+ ++ + + A+I +C A +A+ ++ Sbjct: 462 KDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRH 514
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 92.0 bits (227), Expect = 1e-18 Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 5/123 (4%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARF 170 AH + F+ + G E + K++GE R +R +F+ A+E A P I+F DE+D+I R Sbjct: 322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR- 380 Query: 171 DAQTGADREVQR-ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 347 TG +V+ ++ +LL+++DG + NV VI A+NR D +DPA+LRPGRLD KI+ Sbjct: 381 --GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIE 438 Query: 348 LPD 356 PD Sbjct: 439 RPD 441
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 92.0 bits (227), Expect = 1e-18 Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 5/123 (4%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARF 170 AH + F+ + G E + K++GE R +R +F+ A+E A P I+F DE+D+I R Sbjct: 322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR- 380 Query: 171 DAQTGADREVQR-ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 347 TG +V+ ++ +LL+++DG + NV VI A+NR D +DPA+LRPGRLD KI+ Sbjct: 381 --GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIE 438 Query: 348 LPD 356 PD Sbjct: 439 RPD 441
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 91.7 bits (226), Expect = 2e-18 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188 V G E + KY+GE +R +F RL + II DE+DAI R + G+ Sbjct: 285 VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR-GSMAGS 343 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL+++DG +Q N+ VI TNR D +D ALLRPGRL+ K+E LPD + + Sbjct: 344 TGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403 Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + TA+M LS +VD+++ S A++ + + A A+ ++ Sbjct: 404 LQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 91.7 bits (226), Expect = 2e-18 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188 V G E + KY+GE +R +F RL + II DE+DAI R + G+ Sbjct: 285 VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR-GSMAGS 343 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL+++DG +Q N+ VI TNR D +D ALLRPGRL+ K+E LPD + + Sbjct: 344 TGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403 Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + TA+M LS +VD+++ S A++ + + A A+ ++ Sbjct: 404 LQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 91.7 bits (226), Expect = 2e-18 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188 V G E + KY+GE +R +F RL + II DE+DAI R + G+ Sbjct: 285 VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR-GSMAGS 343 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL+++DG +Q N+ VI TNR D +D ALLRPGRL+ K+E LPD + + Sbjct: 344 TGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403 Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + + TA+M LS +VD+++ S A++ + + A A+ ++ Sbjct: 404 LQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 90.9 bits (224), Expect = 3e-18 Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 7/177 (3%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + F V S+ V K++GE ++V+ +F +A+EN P+IIFIDEVDA+ R + ++ Sbjct: 187 ATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGES 246 Query: 183 GADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 A R RI ELL QM+G + + V V+ ATN LD A+ R R +R+I PLPD Sbjct: 247 EASR---RIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDL 301 Query: 360 RQKRLVFQVCTAKMNLSDE---VDLEDY---VSRPDKISAADITAICQEAGMHAVRK 512 + +F++ N+ D + EDY + + S +DI + ++A M +RK Sbjct: 302 AARTTMFEI-----NVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 90.1 bits (222), Expect = 4e-18 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 4/174 (2%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A +++ F V ++ K+ G+ ++VR +F LA+ AP+IIFIDE+D + R + Sbjct: 247 ASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR--GNS 304 Query: 183 GADREVQRILMELLNQMDG----FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 350 G +R+ E L QMDG FD V V+ ATN LD AL R R +++I PL Sbjct: 305 GEHEASRRVKSEFLVQMDGSQNKFDSR-RVFVLAATNIPWELDEALRR--RFEKRIFIPL 361 Query: 351 PDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 PD ++ + + SDE++ +D +R + S AD+ ++C+ A ++ +R+ Sbjct: 362 PDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRR 415
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 89.7 bits (221), Expect = 6e-18 Identities = 56/168 (33%), Positives = 98/168 (58%), Gaps = 3/168 (1%) Frame = +3 Query: 18 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197 + F + S+ V K++GE R+VR +F +A+E P+IIFIDE+D++ +R + ++ + R Sbjct: 188 STFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSR- 246 Query: 198 VQRILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 RI E L QM+G + + V V+ ATN TLD A+ R R +++I PLP+ + Sbjct: 247 --RIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARAR 302 Query: 375 VFQVCTAKM--NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +F++ K+ L+ + D ++ D S +DI+ + ++A M VR+ Sbjct: 303 MFELNVGKIPSELTSQ-DFKELAKMTDGYSGSDISIVVRDAIMEPVRR 349
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 89.0 bits (219), Expect = 1e-17 Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARF 170 A + F+ + G E + K++GE R +R +F+ A+E A P I+F DE+D+I R Sbjct: 322 AREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR- 380 Query: 171 DAQTGADREVQR-ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 347 TG +V+ ++ +LL+++DG + NV VI A+NR D +DPA+LRPGRLD KI+ Sbjct: 381 --GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIE 438 Query: 348 LPD 356 PD Sbjct: 439 RPD 441
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 87.8 bits (216), Expect = 2e-17 Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 13/195 (6%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + + F V S + KYLGE ++VR +F +AK+ +P+IIFIDE+D++ TAR D + Sbjct: 525 ATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNEN 584 Query: 183 GADREVQRILMELLNQMDGFDQTV------------NVKVIMATNRADTLDPALLRPGRL 326 + R RI ELL Q V V+ ATN +D A R R Sbjct: 585 ESSR---RIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RF 639 Query: 327 DRKIEFPLPDRRQKRLVFQVCTAKM-NLSDEVDLEDYVSRPDKISAADITAICQEAGMHA 503 RK+ PLPD + + AK N ++D E + S +D+T++ +EA M Sbjct: 640 SRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEP 699 Query: 504 VRKNRYVILPKDFEK 548 +R ++ DF+K Sbjct: 700 IRDLGDKLMFADFDK 714
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 86.7 bits (213), Expect = 5e-17 Identities = 50/164 (30%), Positives = 83/164 (50%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 F+ GS F + +G G +R +F AK+N+P ++FIDE+D++ R + Sbjct: 227 FLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNR--TFSPHHPFAN 284 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 + + +LL +MDGF + V+ ATN+A+ LD ALLRPGR D +I P + + Sbjct: 285 QTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLN 344 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515 + K+ +D+E + ADI + +A + A +N Sbjct: 345 LYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRN 388
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 84.0 bits (206), Expect = 3e-16 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 12/172 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188 V G + + KY+GE VR +F RL + II DE+DAI R + G Sbjct: 285 VNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQR-GSVAGN 343 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL ++DG DQ N+ VI TNR D +D ALLRPGRL+ ++E LP+ + + Sbjct: 344 SGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 403 Query: 369 RLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + + T +M ++D+VD ++ + S A++ + + A A+ + Sbjct: 404 VQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNR 455
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 83.6 bits (205), Expect = 4e-16 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 3/173 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A F + + KY+GEG ++VR +F +A+E P+IIFIDEVD++ R + + Sbjct: 394 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEH 453 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPD 356 A R R+ E L + DG + +V++ ATNR LD A+LR R +++ LP+ Sbjct: 454 DASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPN 508 Query: 357 RRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + L+ + K + +L D S +D+TA+ ++A + +R+ Sbjct: 509 EETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 561
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 83.6 bits (205), Expect = 4e-16 Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Frame = +3 Query: 18 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197 + F V S+ + K+LGE ++V+++F LA+++ P+IIFIDEVD++ +R + ++ A R Sbjct: 187 STFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR- 245 Query: 198 VQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 RI E L QM G + V+ ATN LD A+ R R +++I PLP+ + Sbjct: 246 --RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQ 301 Query: 375 VFQ--VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +F+ + + NL+D ++ + + + S ADI+ I +++ M VRK Sbjct: 302 MFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 83.6 bits (205), Expect = 4e-16 Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Frame = +3 Query: 18 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197 + F V S+ + K+LGE ++V+++F LA+++ P+IIFIDEVD++ +R + ++ A R Sbjct: 187 STFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR- 245 Query: 198 VQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 RI E L QM G + V+ ATN LD A+ R R +++I PLP+ + Sbjct: 246 --RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQ 301 Query: 375 VFQ--VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 +F+ + + NL+D ++ + + + S ADI+ I +++ M VRK Sbjct: 302 MFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 83.6 bits (205), Expect = 4e-16 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 3/173 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A F + + KY+GEG ++VR +F +A+E P+IIFIDEVD++ R + + Sbjct: 396 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEH 455 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPD 356 A R R+ E L + DG + +V++ ATNR LD A+LR R +++ LP+ Sbjct: 456 DASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPN 510 Query: 357 RRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + L+ + K + +L D S +D+TA+ ++A + +R+ Sbjct: 511 EETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 563
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 82.8 bits (203), Expect = 7e-16 Identities = 45/122 (36%), Positives = 67/122 (54%) Frame = +3 Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362 G E ++ L ++L +MDGF V VI ATNR D LDPAL RPGR DR++ LPD + Sbjct: 11 GGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVK 70 Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542 + + +V K++++ +VD S AD+ + EA + A R N+ + +F Sbjct: 71 GREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEF 130 Query: 543 EK 548 EK Sbjct: 131 EK 132
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 82.0 bits (201), Expect = 1e-15 Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 1/157 (0%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIA-TARFDAQTGADREVQRI 209 + + + +++G+G R + +++ LA + AP++IFIDE+DAI R+ + G +V + Sbjct: 188 IKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRG---DVSEV 244 Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 389 + LL +MDG +Q V I ATN + LD A+ R + +IEF LPD +++L+ + Sbjct: 245 VNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKY 302 Query: 390 TAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMH 500 M L + ++ V ++S DI + +H Sbjct: 303 IETMPLKVDFPVDKLVKLTREMSGRDIKDRVLKTALH 339
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 81.6 bits (200), Expect = 2e-15 Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188 V G + + KY+GE +R +F RL + II DE+DAI AR + G Sbjct: 290 VNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKAR-GSVAGN 348 Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368 ++ +LL ++DG +Q N+ VI TNR D +D ALLRPGRL+ ++E LP+ + + Sbjct: 349 SGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 408 Query: 369 RLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + + T +M ++ +VD + ++ S A++ + + A A+ + Sbjct: 409 VQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNR 460
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 79.7 bits (195), Expect = 6e-15 Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + S K+ GE ++ VF LA + P+IIFIDE+D+ R + +D E Sbjct: 158 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEAT 213 Query: 204 RIL-MELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 ++ + ++ DG D N +VI+ ATNR LD A+LR R+ + P+ RQ++ Sbjct: 214 AMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKD 271 Query: 375 VFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 + ++ N+ V+L + + D S +D+ +C++A + VR Sbjct: 272 ILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVR 316
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 79.7 bits (195), Expect = 6e-15 Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 1/157 (0%) Frame = +3 Query: 33 VVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIA-TARFDAQTGADREVQRI 209 + + + +++G+G R + +++ LA + AP++IFIDE+DAI RF + G +V + Sbjct: 188 IKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRG---DVSEV 244 Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 389 + LL +MDG +Q V I ATN + LD A+ R + +IEF LP ++R++ + Sbjct: 245 VNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKY 302 Query: 390 TAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMH 500 M L + ++ V +S DI + +H Sbjct: 303 IETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALH 339
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 79.7 bits (195), Expect = 6e-15 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 3/165 (1%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + S K+ GE ++ VF LA + P IIF+DE+D+ R + D E Sbjct: 157 FINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR----SSMDHEAT 212 Query: 204 RIL-MELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 ++ + ++ DG D N V V+ ATNR +D A+LR R+ LP+ Q+ Sbjct: 213 AMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREE 270 Query: 375 VFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509 + ++ + NLS+ ++L++ S+ + S +D+ +C++A M+ VR Sbjct: 271 ILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVR 315
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 76.6 bits (187), Expect = 5e-14 Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 2/172 (1%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + A FI + S + K+ GE ++V +F LA + P IIFIDE+D+ R + Sbjct: 147 AKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRER----S 202 Query: 183 GADREVQRIL-MELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 D EV L E + DG V +I ATNR + +D A LR RL ++ LP Sbjct: 203 STDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGS 260 Query: 360 RQKRLVFQVCTAKMNL-SDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 Q+ + V L DE DL+ S +D+ +C+EA + A ++ Sbjct: 261 DQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 76.3 bits (186), Expect = 7e-14 Identities = 48/163 (29%), Positives = 81/163 (49%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + S K+ GE ++ VF LA + P+IIFIDE+D+ R + A ++ Sbjct: 154 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK 213 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 M L + +D D + V V+ ATNR LD A++R R+ + P +Q+ + + Sbjct: 214 AQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILK 270 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + N+ VDL + D S +D+ +C++A + VR+ Sbjct: 271 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 76.3 bits (186), Expect = 7e-14 Identities = 48/163 (29%), Positives = 81/163 (49%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + S K+ GE ++ VF LA + P+IIFIDE+D+ R + A ++ Sbjct: 154 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK 213 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 M L + +D D + V V+ ATNR LD A++R R+ + P +Q+ + + Sbjct: 214 AQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILK 270 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + N+ VDL + D S +D+ +C++A + VR+ Sbjct: 271 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 76.3 bits (186), Expect = 7e-14 Identities = 48/163 (29%), Positives = 81/163 (49%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + S K+ GE ++ VF LA + P+IIFIDE+D+ R + A ++ Sbjct: 154 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK 213 Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383 M L + +D D + V V+ ATNR LD A++R R+ + P +Q+ + + Sbjct: 214 AQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILK 270 Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512 + N+ VDL + D S +D+ +C++A + VR+ Sbjct: 271 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 72.4 bits (176), Expect = 9e-13 Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 18/146 (12%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 ++ ++ V GS+F + G V D+F+ + +P I++IDE+D+IA R +A Sbjct: 399 SYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANK 458 Query: 183 -------------GADREVQR-----ILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 308 G++ + + +LM+ L MDG+ + ++ +I ATNR +TLD A+ Sbjct: 459 QLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAI 518 Query: 309 LRPGRLDRKIEFPLPDRRQKRLVFQV 386 +RPGR DR+I F P +++ + ++ Sbjct: 519 MRPGRFDRQIVFSPPFFEERKDILRI 544
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 71.6 bits (174), Expect = 2e-12 Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%) Frame = +3 Query: 24 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203 FI + S K+ GE ++ VF +A++ P IIFIDE+D+ D Q+ Sbjct: 145 FINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLR---DRQSHDHESTA 201 Query: 204 RILMELLNQMDGFDQTVNVKVIM-ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380 + + + DGF + + ++M ATNR +D A+LR R+ + + P+P+ +Q+ + Sbjct: 202 MMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQIL 259 Query: 381 QVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEA 491 V +++ V+L + + +S +D+ +C+ A Sbjct: 260 NVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLA 296
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 69.7 bits (169), Expect = 6e-12 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 21/190 (11%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182 A + + F + S KYLGE ++VR +F +AK+ +P+IIF+DE+D+I +R Sbjct: 659 ATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSR--NNE 716 Query: 183 GADREVQRILMELLNQ--------------------MDGFDQTVNVKVIMATNRADTLDP 302 + +RI E L Q +G + V V+ ATN ++D Sbjct: 717 NENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDE 776 Query: 303 ALLRPGRLDRKIEFPLPDRRQKRLVF-QVCTAKMNLSDEVDLEDYVSRPDKISAADITAI 479 A R R R+ PLP+ + + + F ++ + + + E D ++ V + S +DIT++ Sbjct: 777 AARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSL 834 Query: 480 CQEAGMHAVR 509 ++A M +R Sbjct: 835 AKDAAMGPLR 844
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 61.2 bits (147), Expect = 2e-09 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 3/155 (1%) Frame = +3 Query: 63 LGEGPRMVRDVFRLAKENAPAIIFIDEVD-AIATARFDAQTGADREVQRILMELLNQMDG 239 +GE VR + + A+ +P I++IDE+D A + F+ +G + V + L++ Sbjct: 316 IGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLSEKKS 375 Query: 240 FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLS--D 413 V V+ N D+L P LLR GR D LPD +++ +F+V K+ Sbjct: 376 -----PVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWS 430 Query: 414 EVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 D E ++ ++ S A+I EA A +NR Sbjct: 431 TYDTEILSAQSNRFSGAEIEESIYEAMHIAFNENR 465
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 57.4 bits (137), Expect = 3e-08 Identities = 30/100 (30%), Positives = 53/100 (53%) Frame = +3 Query: 207 ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386 +L +LL ++DG V + ATNR + LDPALLRPGR D+ ++ LP ++++ + Q Sbjct: 1154 LLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQF 1213 Query: 387 CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAV 506 + + + R +AAD+ + E+ + A+ Sbjct: 1214 YGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAI 1253
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 54.3 bits (129), Expect = 3e-07 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 1/182 (0%) Frame = +3 Query: 30 RVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRI 209 RV + YLGE +R F A++ P ++F DE DA+A R D +G E++R+ Sbjct: 148 RVKLDRLISSYLGETATNIRKTFEFARKQ-PCVLFFDEFDALARTRDD--SGEHNELRRV 204 Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 389 + LL +D +I ATN +LD A+ R R D + F DR + ++ + Sbjct: 205 VNSLLLFIDNMQP--KGFLIAATNLDRSLDAAIWR--RFDEVLWF---DRPEAAMIGRFL 257 Query: 390 TAKM-NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 566 K N+ D + + S A+I +C +A + + R + +DF + + Sbjct: 258 KLKFKNVPVAFDPARNSAALEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRALQDEA 317 Query: 567 KK 572 ++ Sbjct: 318 RR 319
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 48.5 bits (114), Expect = 1e-05 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 1/134 (0%) Frame = +3 Query: 3 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVD-AIATARFDAQ 179 A+ T +R+ + +GE +R++ +A+ +P +++IDE+D A + Sbjct: 280 ANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGD 339 Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359 +G V + L++ +T V V+ N L +LR GR D LP+ Sbjct: 340 SGTSARVFGTFITWLSE-----KTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNN 394 Query: 360 RQKRLVFQVCTAKM 401 ++ L+FQ+ A++ Sbjct: 395 EERELIFQIHLARI 408
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 47.4 bits (111), Expect = 3e-05 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 5/158 (3%) Frame = +3 Query: 69 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 248 E R + AK+ +P II+I + + R +D ++ Q D F + Sbjct: 1451 ESLRRLNLTLDFAKKMSPCIIWIQNIHQLNVNRLTQNVESDPTFLLGILLKYFQTD-FSK 1509 Query: 249 TV--NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 422 T N+ VI +T+ +DPAL+ P RLD+ I L + Q++ F + K N + + Sbjct: 1510 TKKNNIIVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKEN 1569 Query: 423 ---LEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 L ++ SR + D++A+ E + ++ KNR I Sbjct: 1570 LFFLNEFGSRTMGYNLRDLSALTNEVLLISITKNRSFI 1607
>YCF2_ADICA (Q85B60) Protein ycf2| Length = 2104 Score = 46.2 bits (108), Expect = 7e-05 Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 5/171 (2%) Frame = +3 Query: 21 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE- 197 +F V F+ K E + VF +AKE +P ++I ++ + R + AD + Sbjct: 1430 SFFNNVRGNFISK---ESVHRLNIVFEIAKEMSPCTLWIQDIHELNICRSYNKLEADPKF 1486 Query: 198 -VQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374 + +IL + +++ D NV VI T+ +DPAL+ P RL++ I F + RQ++ Sbjct: 1487 LLCQILKSIGHKLGNSDIRENV-VIATTHVPARIDPALVAPNRLNQLINFRRSNGRQRQK 1545 Query: 375 VFQVCTAKMNL---SDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518 + ++ LE VS S D+ + EA + K R Sbjct: 1546 ELSILLRIKGFEVGANPTLLESTVSGTAGYSKRDLLLLANEALLIGTSKGR 1596
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 46.2 bits (108), Expect = 7e-05 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 5/147 (3%) Frame = +3 Query: 102 LAKENAPAIIFIDEVDAI----ATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKV 266 LAK +P II+I + + AT D + ++ L DG D N+ V Sbjct: 1440 LAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRDGEKDSMRNILV 1499 Query: 267 IMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRP 446 I +T+ +DPAL+ P RLDR I + Q++ F + L +++ S Sbjct: 1500 IASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILLCSKGLYSVKFPDEFGSIT 1559 Query: 447 DKISAADITAICQEAGMHAVRKNRYVI 527 + D+ A+ EA + ++ +N+ VI Sbjct: 1560 IDYAVRDLAALADEALILSITRNKSVI 1586
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = +3 Query: 123 AIIFIDEVDAIATARF--DAQTGADREVQRILME-LLNQMDGFDQTVNVKVIMATNRADT 293 +II +++VDA +R A + + R+ LLN +DG T V M TN D Sbjct: 277 SIILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHIDR 336 Query: 294 LDPALLRPGRLDRK 335 LDPAL+RPGR+D K Sbjct: 337 LDPALIRPGRVDVK 350
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/39 (56%), Positives = 25/39 (64%) Frame = +3 Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRK 335 LLN +DG T V M TN D LDPAL+RPGR+D K Sbjct: 312 LLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%) Frame = +3 Query: 96 FRLAKENAPAIIFID---EVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKV 266 F LAK +P II+I E++ T G +L+ +++ D N+ Sbjct: 692 FELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGGEKDSIRNILF 751 Query: 267 IMATNRADTLDPALLRPGRLDRKIEFPL--PDRRQKRLVFQVCTAKMNLSDEVDLED-YV 437 I +T+ +DPAL+ P RLD I + +RQ+ +C+ + EV D + Sbjct: 752 IASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEKEVSCPDEFG 811 Query: 438 SRPDKISAADITAICQEAGMHAVRKNRYVI 527 S A D+ A+ EA + ++ + + VI Sbjct: 812 SITIDSDARDLAALANEALITSITRKKSVI 841
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 43.9 bits (102), Expect = 4e-04 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +3 Query: 123 AIIFIDEVDAIATARFDAQTGADREVQRILME-LLNQMDGFDQTVNVKVIMATNRADTLD 299 +I+ ++++DA R +QTG + LLN +DG + M TN + LD Sbjct: 314 SILLLEDIDAAFNKR--SQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTTNHPEKLD 371 Query: 300 PALLRPGRLDRKI 338 A++RPGR+D K+ Sbjct: 372 AAIMRPGRIDYKV 384
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/39 (56%), Positives = 25/39 (64%) Frame = +3 Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRK 335 LLN +DG T V M TN D LDPAL+RPGR+D K Sbjct: 312 LLNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVDLK 350
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 43.5 bits (101), Expect = 5e-04 Identities = 28/108 (25%), Positives = 56/108 (51%) Frame = +3 Query: 63 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 242 +GE +R + +A+ +P I++IDE+D A + D++ G R+L ++ + Sbjct: 300 VGESESRLRQMIDVAETLSPCILWIDEMDK-AFSNNDSR-GDSGTSNRVLATFISWLS-- 355 Query: 243 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386 ++T V V+ N D L ++R GR D LP+ +++ +F++ Sbjct: 356 EKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKI 403
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +3 Query: 123 AIIFIDEVDAIATARF-DAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 299 A++ +++VD+ R + G V LLN +DG + + M TN + LD Sbjct: 296 AVVLLEDVDSAFQGRERSGEVGFHANVT--FSGLLNALDGVTSSDERIIFMTTNHPEKLD 353 Query: 300 PALLRPGRLDRK 335 PAL+RPGR+D K Sbjct: 354 PALVRPGRVDVK 365
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 41.6 bits (96), Expect = 0.002 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = +3 Query: 123 AIIFIDEVDAIATARFDAQTGADREVQRI----LMELLNQMDGFDQTVNVKVIMATNRAD 290 +II +++VDA +R T Q + LLN +DG + V M TN + Sbjct: 277 SIILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASSEARIVFMTTNFIE 336 Query: 291 TLDPALLRPGRLDRK 335 LDPAL+RPGR+D K Sbjct: 337 RLDPALVRPGRVDLK 351
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/55 (38%), Positives = 31/55 (56%) Frame = +3 Query: 258 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 422 V V+ TNR D LDPAL+RPGR R+I P + + +F+V + L ++ Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLN 55
>YCF2_PHYPA (P61243) Protein ycf2| Length = 2259 Score = 39.3 bits (90), Expect = 0.009 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 7/165 (4%) Frame = +3 Query: 63 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE-VQRILMELLNQMDG 239 L E R + + LA++ +P II++ + + R +D + I ++ Sbjct: 1601 LMESLRRLNLILELAEKLSPCIIWMPNIHELNVNRSTQNVESDPTFLLGIFLKYFQTGFS 1660 Query: 240 FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIE---FPLPDRRQK---RLVFQVCTAKM 401 T N+ +I +T+ +DPAL+ P RLDR I F + R++K L + Sbjct: 1661 KKNTNNIIIIGSTHLPKKVDPALISPNRLDRLINIRTFNILQRQKKISILLYSKYSKYFY 1720 Query: 402 NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPK 536 + + L ++ SR +A D+ + E + ++ +N+ I K Sbjct: 1721 SKKKKSSLNEFGSRTIGYNARDLAGLINEILLISINQNQSTIQKK 1765
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 37.7 bits (86), Expect = 0.026 Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 4/139 (2%) Frame = +3 Query: 93 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE-VQRILMELLNQMDGFDQTVNVKVI 269 + LAK+ +P II+I ++ + R +D + IL++ + T + +I Sbjct: 1713 ILELAKKMSPCIIWIQDIHELNVNRSTENVESDPTFLLGILLKYFHTEFISKSTKGIIII 1772 Query: 270 MATNRADTLDPALLRPGRLDRKIEFPLPD--RRQKRLVFQVCTAKMNLSDE-VDLEDYVS 440 +T+ +DPAL+ P RLD+ + + D RQ++ + + + ++ + ++ Sbjct: 1773 GSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFNEFAY 1832 Query: 441 RPDKISAADITAICQEAGM 497 R + D+ A+ E + Sbjct: 1833 RTMGYNGRDLVALANEVSL 1851
>TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 37.7 bits (86), Expect = 0.026 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 6/101 (5%) Frame = +3 Query: 27 IRVVGSEFVQKYLGEGPRMVRDVFRLAKE-----NAPAIIFIDEVDAIATARFDAQTGAD 191 I + K+ E ++V +F+ ++ A + IDEV+++ AR + GA+ Sbjct: 210 IEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAE 269 Query: 192 -REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311 + R++ +L Q+D + NV ++ +N + +D A + Sbjct: 270 PSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFV 310
>TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 37.7 bits (86), Expect = 0.026 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 6/101 (5%) Frame = +3 Query: 27 IRVVGSEFVQKYLGEGPRMVRDVFRLAKE-----NAPAIIFIDEVDAIATARFDAQTGAD 191 I + K+ E ++V +F+ ++ A + IDEV+++ AR + GA+ Sbjct: 210 IEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAE 269 Query: 192 -REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311 + R++ +L Q+D + NV ++ +N + +D A + Sbjct: 270 PSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFV 310
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 37.0 bits (84), Expect = 0.044 Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 6/107 (5%) Frame = +3 Query: 9 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVF----RLAK-ENAPAIIFIDEVDAIATARFD 173 ++ + + + K+ E ++V+ +F LA+ E + IDEV+++ R Sbjct: 204 YSKSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRES 263 Query: 174 AQTGAD-REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311 + + ++ + R + LL Q+D + NV ++ +N TLD AL+ Sbjct: 264 SSSRSEPSDAIRAVNALLTQIDRIRRRDNVLILCTSNLESTLDKALV 310
>PCH2_YEAST (P38126) Pachytene checkpoint protein 2| Length = 536 Score = 36.2 bits (82), Expect = 0.075 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%) Frame = +3 Query: 57 KYLGEGPRMVRDVFR----LAKENAPAIIFI----DEVDAIATARFD-AQTGADREVQRI 209 K+ GE + + VF+ L K N IFI DEV+AIA++R + + + R+ Sbjct: 363 KWFGESSKNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRV 422 Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311 + LL Q+D + N + +N D+LD A + Sbjct: 423 VNTLLTQLDRLKKYHNFLALATSNLLDSLDDAFV 456
>YCF2_PSINU (Q8WHW9) Protein ycf2| Length = 2313 Score = 34.3 bits (77), Expect = 0.29 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%) Frame = +3 Query: 42 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ--RILM 215 S+ V + GE R + F L K +P I++I ++ + R + D + +L Sbjct: 1644 SKSVVLFPGESVRRLTLTFELVKRMSPCIVWIQDIHELNLDRVMNELEVDPKYLFCSLLK 1703 Query: 216 ELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKI 338 L N + N+ +I T+ +DP+ + P RLD+ I Sbjct: 1704 CLSNNSSNYYVRNNI-IIAPTHIPSKVDPSFISPNRLDQLI 1743
>NADA_RHOBA (Q7UNR5) Quinolinate synthetase A| Length = 392 Score = 33.5 bits (75), Expect = 0.49 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 11/102 (10%) Frame = +3 Query: 285 ADTLDPALLRPGRLD----RKIEFPLPDRR------QKRLVFQVCTAKMNLSDEVDLEDY 434 A+T D RP R++ R+++ LPD + QV A ++S+ +D E Sbjct: 99 AETADILANRPDRIEARDGRRVDVLLPDMAAGCSMADMAAIAQVEAAWADMSEVIDTEQV 158 Query: 435 VSRPDKISAADITAIC-QEAGMHAVRKNRYVILPKDFEKGYR 557 + SAA + A C + G+ N +L FE+G R Sbjct: 159 IPVTYINSAASLKAFCGRHGGIVCTSSNARAVLEWAFERGQR 200
>YCF2_EPIVI (P30072) Protein ycf2| Length = 2216 Score = 33.1 bits (74), Expect = 0.64 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%) Frame = +3 Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDR--KIEFPLPDRRQKRLVFQVCT 392 L+N + T N+ VI +T+ +DPALL P +L+ KI L +++K T Sbjct: 1690 LVNHLSERCSTNNIIVIASTHIPKKVDPALLAPNKLNTCIKIRRLLIPQQRKHFCTLSYT 1749 Query: 393 AKMNLSDEV-DLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527 +L +++ + S SA D+ A+ EA ++ +N+ ++ Sbjct: 1750 RGFHLENKIFHTNGFGSITMGSSARDLVALTNEALSISITQNKSIL 1795
>HSLU_BARHE (Q6G5G0) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 436 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = +3 Query: 78 RMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE-VQRILMELL 224 +++++ R+A+ + I+FIDE+D IAT A RE VQR L+ L+ Sbjct: 231 QIIQEALRVAENDG--IVFIDEIDKIATRDGGASAAVSREGVQRDLLPLV 278 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,609,008 Number of Sequences: 219361 Number of extensions: 1778147 Number of successful extensions: 6430 Number of sequences better than 10.0: 275 Number of HSP's better than 10.0 without gapping: 5904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6253 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
